[med-svn] [Git][med-team/nanopolish][upstream] New upstream version 0.14.0

[Andreas Tille (@tille)]

Andreas Tille pushed to branch upstream at Debian Med / nanopolish


Commits:
c9c51e43 by Andreas Tille at 2022-06-29T17:50:34+02:00
New upstream version 0.14.0
- - - - -


30 changed files:

- + .github/workflows/nanopolish.yaml
- .gitmodules
- Makefile
- README.md
- + etc/htslib_config.h
- + src/basemods/nanopolish_basemods.cpp
- + src/basemods/nanopolish_basemods.h
- src/common/nanopolish_alphabet.h
- src/common/nanopolish_bam_processor.cpp
- src/common/nanopolish_bam_processor.h
- src/common/nanopolish_common.cpp
- src/common/nanopolish_common.h
- src/common/nanopolish_variant.cpp
- src/io/nanopolish_fast5_loader.cpp
- src/io/nanopolish_fast5_loader.h
- src/main/nanopolish.cpp
- src/nanopolish_call_methylation.cpp
- src/nanopolish_detect_polyi.cpp
- − src/nanopolish_extract.cpp
- − src/nanopolish_extract.h
- src/nanopolish_fast5_check.cpp
- − src/nanopolish_getmodel.cpp
- − src/nanopolish_getmodel.h
- src/nanopolish_index.cpp
- src/nanopolish_phase_reads.cpp
- src/nanopolish_polya_estimator.cpp
- src/nanopolish_read_db.cpp
- src/nanopolish_read_db.h
- src/nanopolish_squiggle_read.cpp
- src/nanopolish_squiggle_read.h


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/nanopolish/-/commit/c9c51e43898ed93ff1d189fbfb90f27a83e0753e

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View it on GitLab: https://salsa.debian.org/med-team/nanopolish/-/commit/c9c51e43898ed93ff1d189fbfb90f27a83e0753e
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