[med-svn] [Git][med-team/seqan-needle][master] 8 commits: New upstream version 1.0.1.0.1.git.439eeab+ds

[Michael R. Crusoe (@crusoe)]

Michael R. Crusoe pushed to branch master at Debian Med / seqan-needle


Commits:
0d239dea by Michael R. Crusoe at 2023-08-09T16:02:49+02:00
New upstream version 1.0.1.0.1.git.439eeab+ds
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192fb387 by Michael R. Crusoe at 2023-08-09T16:03:07+02:00
Update upstream source from tag 'upstream/1.0.1.0.1.git.439eeab+ds'

Update to upstream version '1.0.1.0.1.git.439eeab+ds'
with Debian dir fad8bf5d1e7a0b48b9f218f24102c80e82d18d73
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842b67fe by Michael R. Crusoe at 2023-08-09T16:08:36+02:00
New upstream snapshot.

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8edbf7a4 by Michael R. Crusoe at 2023-08-09T16:08:48+02:00
d/patches: refresh; drop spelling patch (applied upstream).

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525ba1fc by Michael R. Crusoe at 2023-08-09T17:26:46+02:00
d/patches: cherry-pick from upstream for Seqan 3.3.0

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5844ee59 by Michael R. Crusoe at 2023-08-09T17:40:47+02:00
routine-update: Standards-Version: 4.6.2

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9c618b7c by Michael R. Crusoe at 2023-08-09T17:41:10+02:00
Set upstream metadata fields: Bug-Submit.

Changes-By: lintian-brush

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caf226e4 by Michael R. Crusoe at 2023-08-09T17:41:39+02:00
routine-update: Ready to upload to unstable

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30 changed files:

- README.md
- debian/changelog
- debian/control
- + debian/patches/743f0c2db4ed59aeb6b76744aa8485f208b9f9d2.patch
- debian/patches/create_doc_without_previous_binary_build.patch
- debian/patches/privacy
- debian/patches/series
- − debian/patches/spelling.patch
- debian/upstream/metadata
- include/ibf.h
- src/estimate.cpp
- src/ibf.cpp
- src/main.cpp
- test/api/CMakeLists.txt
- test/api/count_test.cpp
- test/api/estimate_test.cpp
- + test/api/insert_delete_test.cpp
- test/cli/CMakeLists.txt
- test/cli/count_options_test.cpp
- + test/cli/delete_options_test.cpp
- + test/cli/insert_options_test.cpp
- test/cli/needle_options_test.cpp
- test/data/datasources.cmake
- + test/data/mini_gen.genome
- + test/data/mini_gen2.genome
- + utils/README.md
- + utils/accession.lst
- + utils/breastcancer.R
- + utils/breastcancer_big.R
- + utils/experiments.out


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/seqan-needle/-/compare/f1d6d2d473a9badb6431686e33caad4fb2ebdff2...caf226e4ffe26ea0738fb53fa01c82f2867ae9b7

-- 
View it on GitLab: https://salsa.debian.org/med-team/seqan-needle/-/compare/f1d6d2d473a9badb6431686e33caad4fb2ebdff2...caf226e4ffe26ea0738fb53fa01c82f2867ae9b7
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