[Blends-commit] r1920 - projects/med/trunk/debian-med/tasks

[Debian Pure Blends Subversion Commit]

Author: tille
Date: Thu Oct  8 12:45:14 2009
New Revision: 1920
URL: http://svn.debian.org/viewsvn/blends?rev=1920&view=rev

Log:
Removed old bwa entry


Modified:
   projects/med/trunk/debian-med/tasks/bio

Modified: projects/med/trunk/debian-med/tasks/bio
URL: http://svn.debian.org/viewsvn/blends/projects/med/trunk/debian-med/tasks/bio?rev=1920&view=diff&r1=1920&r2=1919&p1=projects/med/trunk/debian-med/tasks/bio&p2=projects/med/trunk/debian-med/tasks/bio
==============================================================================
--- projects/med/trunk/debian-med/tasks/bio	(original)
+++ projects/med/trunk/debian-med/tasks/bio	Thu Oct  8 12:45:14 2009
@@ -3036,21 +3036,6 @@
 Published-URL: http://lagan.stanford.edu/lagan_web/mlagan_gr.pdf
 X-Category: Comparative genomics
 
-Depends: bwa
-Homepage: http://bio-bwa.sourceforge.net
-Language: C
-Responsible: Charles Plessy <plessy at debian.org>
-WNPP: 548719
-License: GPL
-Vcs-Svn: svn://svn.debian.org/svn/debian-med/trunk/packages/bwa/trunk/
-Pkg-Description: Burrows-Wheeler Aligner
- Burrows-Wheeler Aligner (BWA) is a program that aligns relatively short
- nucleotide sequences against a long reference sequence such as the human
- genome. It implements two algorithms, bwa-short and dBWT-SW. The former works
- for query sequences shorter than 200 bp and the latter for longer sequences up
- to around 100 kbp. Both algorithms do gapped alignment. They are usually more
- accurate and faster on queries with low error rates.
-
 Depends: jstreeview
 Homepage: http://www.sanger.ac.uk/Users/lh3/treeview.shtml
 License: MIT/X11