[Blends-commit] r2795 - in /projects/med/trunk/debian-med/tasks: bio bio-phylogeny

[tille at users.alioth.debian.org]

Author: tille
Date: Fri Apr 29 07:27:19 2011
New Revision: 2795

URL: http://svn.debian.org/wsvn/blends/?sc=1&rev=2795
Log:
Figtree now official package

Modified:
    projects/med/trunk/debian-med/tasks/bio
    projects/med/trunk/debian-med/tasks/bio-phylogeny

Modified: projects/med/trunk/debian-med/tasks/bio
URL: http://svn.debian.org/wsvn/blends/projects/med/trunk/debian-med/tasks/bio?rev=2795&op=diff
==============================================================================
--- projects/med/trunk/debian-med/tasks/bio (original)
+++ projects/med/trunk/debian-med/tasks/bio Fri Apr 29 07:27:19 2011
@@ -27,6 +27,8 @@
 X-Published-Title: FIXME
 Published-In: Computer Applications in the Bioscience 12:357-358
 Published-Year: 1996
+
+Depends: figtree
 
 X-End-Category: Phylogenetic analysis
 
@@ -3330,17 +3332,6 @@
     peptide), and the specific peptides for each sub-group of proteins are
     indicated.
 
-Depends: figtree
-Homepage: http://tree.bio.ed.ac.uk/software/figtree/
-Vcs-Svn: svn://svn.debian.org/svn/debian-med/trunk/packages/figtree/trunk
-Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/figtree/trunk/?rev=0&sc=0
-License: GPL
-Language: Java
-Pkg-Description: graphical phylogenetic tree viewer
- FigTree is designed as a graphical viewer of phylogenetic trees and as
- a program for producing publication-ready figures.  In particular it is
- designed to display summarized and annotated trees produced by BEAST.
-
 Suggests: maude
 WNPP: 611927
 

Modified: projects/med/trunk/debian-med/tasks/bio-phylogeny
URL: http://svn.debian.org/wsvn/blends/projects/med/trunk/debian-med/tasks/bio-phylogeny?rev=2795&op=diff
==============================================================================
--- projects/med/trunk/debian-med/tasks/bio-phylogeny (original)
+++ projects/med/trunk/debian-med/tasks/bio-phylogeny Fri Apr 29 07:27:19 2011
@@ -300,6 +300,8 @@
 
 Depends: mrbayes
 
+Depends: figtree
+
 Depends: jstreeview
 Homepage: http://www.sanger.ac.uk/Users/lh3/treeview.shtml
 License: MIT/X11
@@ -320,17 +322,6 @@
 Pkg-Description: Bayesian sampling of phylogenetic trees from molecular data
  TreeTime is controlled by input files in nexus format and does
  bayesian sampling of phylogenetic trees from these data.
-
-Depends: figtree
-Homepage: http://tree.bio.ed.ac.uk/software/figtree/
-Vcs-Svn: svn://svn.debian.org/svn/debian-med/trunk/packages/figtree/trunk
-Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/figtree/trunk/?rev=0&sc=0
-License: GPL
-Language: Java
-Pkg-Description: graphical phylogenetic tree viewer
- FigTree is designed as a graphical viewer of phylogenetic trees and as
- a program for producing publication-ready figures.  In particular it is
- designed to display summarized and annotated trees produced by BEAST.
 
 Depends: jmodeltest
 Homepage: http://darwin.uvigo.es/software/jmodeltest.html