[Blends-commit] [SCM] science branch, master, updated. b79215687d0031e8e15ecd3fa606a06a9054bbe8
Andreas Tille
tille at debian.org
Fri Oct 24 09:51:49 UTC 2014
The following commit has been merged in the master branch:
commit 0e5498578b2acff0a7e7d88e87d785c992f9e6a6
Author: Andreas Tille <tille at debian.org>
Date: Fri Oct 24 11:15:31 2014 +0200
recreate metapackages
diff --git a/debian-science-tasks.desc b/debian-science-tasks.desc
index a560e8d..6c6db1f 100644
--- a/debian-science-tasks.desc
+++ b/debian-science-tasks.desc
@@ -38,11 +38,13 @@ Packages: list
xpa-tools
python-pywcs
python-astropy
+ python3-astropy
python-pyfits
- python3-pyfits
esorex
python-cpl
eso-midas
+ wxastrocapture
+ splash
Task: science-astronomy-dev
Section: debian-science
@@ -69,7 +71,6 @@ Packages: list
libcpl-dev
python-pywcs
python-cpl
- libgyoto1-dev
liberfa-dev
libfits-java
tcl-fitstcl
@@ -253,6 +254,7 @@ Packages: list
openmpipython
mpich2python
python-mpi
+ htcondor
dmtcp
environment-modules
@@ -363,6 +365,9 @@ Packages: list
gtkwave
gwave
qsapecng
+ berkeley-abc
+ qrouter
+ magic
Task: science-electrophysiology
Section: debian-science
@@ -467,15 +472,16 @@ Packages: list
libmadlib-dev
libslepc3.4.2-dev
libelmer-dev
+ libug-dev
libmed-dev
libmedc-dev
libmedimport-dev
libnetcdf-dev
python-netcdf
+ r-cran-rnetcdf
syfi-dev
libnfft3-dev
libnlopt-dev
- python-fftw3
libcoin80-dev
libmetis-edf-dev
libslicot-dev
@@ -552,7 +558,6 @@ Packages: list
gdal-bin
ogdi-bin
postgis
- postgresql-9.3-postgis-2.1
osm2pgsql
josm
josm-plugins
@@ -934,7 +939,6 @@ Packages: list
xmaxima
wxmaxima
pari-gp
- pari-extra
gap
gap-small-groups-extra
gap-trans-groups
@@ -943,6 +947,7 @@ Packages: list
gap-table-of-marks
gap-guava
gap-character-tables
+ gap-float
gerris
freefem
freefem3d
@@ -1047,14 +1052,17 @@ Packages: list
r-cran-vcd
r-cran-permute
python-statsmodels
+ r-cran-spam
r-cran-spatstat
r-cran-deldir
r-cran-fastcluster
r-cran-statmod
python-openturns
python-pandas
+ r-cran-ecodist
r-cran-energy
r-cran-mvnormtest
+ r-cran-acepack
geomview
octave
xmds
@@ -1135,7 +1143,6 @@ Packages: list
libstxxl-dev
libnewmat10-dev
libmadlib-dev
- dolfin-dev
python-dolfin
libslepc3.4.2-dev
petsc-dev
@@ -1168,7 +1175,6 @@ Packages: list
libcdd-dev
gap-dev
libnfft3-dev
- python-fftw3
libfftw3-dev
fftw-dev
sfftw-dev
@@ -1178,6 +1184,8 @@ Packages: list
libalglib-dev
libeigen3-dev
libviennacl-dev
+ python-pyviennacl
+ python3-pyviennacl
libgnuplot-iostream-dev
libqcustomplot-dev
libcneartree-dev
@@ -1193,6 +1201,9 @@ Packages: list
libdouble-conversion-dev
libfeel++-dev
python-ferari
+ python-pynfft
+ libug-dev
+ python-pyoperators
Task: science-meteorology
Section: debian-science
@@ -1248,6 +1259,7 @@ Packages: list
libgctp-dev
libnetcdf-dev
netcdf-bin
+ r-cran-rnetcdf
liblapack-dev
libblas-dev
libfftw3-dev
@@ -1308,8 +1320,8 @@ Packages: list
horae
ifeffit
sixpack
- libblas3gf
- liblapack3gf
+ libblas3
+ liblapack3
libfftw3-3
libgsl0ldbl
gsl-bin
@@ -1341,6 +1353,7 @@ Packages: list
esys-particle
python-scitools
python-deap
+ python-lmfit
python-tables
vitables
lammps
@@ -1372,10 +1385,10 @@ Packages: list
axiom
maxima
cadabra
- extrema
ggobi
mayavi2
udav
+ extrema
gperiodic
python-elemental
graphviz
@@ -1414,6 +1427,7 @@ Packages: list
gsl-ref-html
libnetcdf-dev
netcdf-doc
+ r-cran-rnetcdf
libxc-dev
libopenmpi-dev
liboce-visualization-dev
@@ -1425,6 +1439,7 @@ Packages: list
python-fabio
libcbf-dev
pyfai
+ libssm-dev
gsl-doc-pdf
libblacs-mpi-dev
libscalapack-mpi-dev
@@ -1457,7 +1472,6 @@ Packages: list
libstxxl-dev
libnewmat10-dev
libmadlib-dev
- dolfin-dev
python-dolfin
libslepc3.4.2-dev
petsc-dev
@@ -1490,13 +1504,14 @@ Packages: list
libcdd-dev
gap-dev
libnfft3-dev
- python-fftw3
liblbfgs-dev
libdogleg-dev
libigraph0-dev
libalglib-dev
libeigen3-dev
libviennacl-dev
+ python-pyviennacl
+ python3-pyviennacl
libgnuplot-iostream-dev
libqcustomplot-dev
libcneartree-dev
@@ -1512,6 +1527,9 @@ Packages: list
libdouble-conversion-dev
libfeel++-dev
python-ferari
+ python-pynfft
+ libug-dev
+ python-pyoperators
Task: science-neuroscience-cognitive
Section: debian-science
@@ -1539,9 +1557,15 @@ Packages: list
xmedcon
nifti-bin
python-nibabel
+ python-dicom
fsl
fslview
python-mvpa2
+ python-nipy
+ python-nipype
+ python-nitime
+ python-dipy
+ openwalnut-qt4
caret
python-pyepl
praat
@@ -1609,6 +1633,7 @@ Packages: list
esys-particle
python-scitools
python-deap
+ python-lmfit
python-tables
vitables
lammps
@@ -1674,6 +1699,7 @@ Packages: list
esys-particle
python-scitools
python-deap
+ python-lmfit
python-tables
vitables
lammps
@@ -1730,6 +1756,9 @@ Packages: list
gtkwave
gwave
qsapecng
+ berkeley-abc
+ qrouter
+ magic
v-sim
gpiv
gpivtools
@@ -1765,7 +1794,6 @@ Packages: list
libfreefoam-dev
pyfai
libnfft3-dev
- python-fftw3
libfftw3-dev
fftw-dev
sfftw-dev
@@ -1773,6 +1801,7 @@ Packages: list
python-openctm
python-quantities
python-multipletau
+ python-pynfft
libfeel++-dev
Task: science-presentation
@@ -1828,6 +1857,8 @@ Packages: list
choreonoid
liburdfdom-tools
robot-player
+ octomap-tools
+ octovis
Task: science-robotics-dev
Section: debian-science
@@ -1845,6 +1876,7 @@ Packages: list
libcnoid-dev
libode-dev
libompl-dev
+ liboctomap-dev
libopenigtlink-dev
liburdfdom-dev
liburdfdom-headers-dev
@@ -1988,14 +2020,17 @@ Packages: list
r-cran-vcd
r-cran-permute
python-statsmodels
+ r-cran-spam
r-cran-spatstat
r-cran-deldir
r-cran-fastcluster
r-cran-statmod
python-openturns
python-pandas
+ r-cran-ecodist
r-cran-energy
r-cran-mvnormtest
+ r-cran-acepack
Task: science-tools
Section: debian-science
@@ -2101,6 +2136,7 @@ Packages: list
ctioga2
python-seaborn
trend
+ python-pyqtgraph
Task: science-viewing-dev
Section: debian-science
@@ -2128,6 +2164,9 @@ Packages: list
python-vtk
libvtk-java
vtk-examples
+ libvtk6-dev
+ libvtk6-java
+ python-vtk6
python-pivy
libgtkdataboxmm-dev
libgtkdatabox-0.9.2-0-dev
@@ -2137,4 +2176,8 @@ Packages: list
libqwtplot3d-qt4-dev
python-qwt3d-qt4
libchealpix-dev
+ python3-skimage
+ python3-skimage-lib
+ libplplot-dev
+ python-plplot-qt
diff --git a/debian/changelog b/debian/changelog
index 7da5246..7e7bee6 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -73,7 +73,7 @@ debian-science (1.3) unstable; urgency=medium
added:
Depends: r-cran-rnetcdf
- -- Andreas Tille <tille at debian.org> Thu, 19 Jun 2014 21:56:24 +0200
+ -- Andreas Tille <tille at debian.org> Fri, 24 Oct 2014 11:24:40 +0200
debian-science (1.2) unstable; urgency=medium
diff --git a/debian/control b/debian/control
index c29a14f..33df0a3 100644
--- a/debian/control
+++ b/debian/control
@@ -7,10 +7,10 @@ Uploaders: Frederic Daniel Luc Lehobey <Frederic at Lehobey.net>,
Andreas Tille <tille at debian.org>,
Sylvestre Ledru <sylvestre at debian.org>
Build-Depends-Indep: blends-dev (>= 0.6.15)
-Standards-Version: 3.9.5
-Homepage: http://wiki.debian.org/DebianScience/
-Vcs-Browser: http://anonscm.debian.org/gitweb/?p=blends/projects/science.git
+Standards-Version: 3.9.6
+Vcs-Browser: https://anonscm.debian.org/cgit/blends/projects/science.git
Vcs-Git: git://anonscm.debian.org/blends/projects/science.git
+Homepage: http://wiki.debian.org/DebianScience/
Package: science-tasks
Architecture: all
@@ -96,6 +96,7 @@ Description: Debian Science Project config package
Package: science-astronomy
+Section: metapackages
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
Recommends: astronomical-almanac,
@@ -119,21 +120,25 @@ Recommends: astronomical-almanac,
python-cpl,
python-pyfits,
python-pywcs,
- python3-pyfits,
+ python3-astropy,
qfits-tools,
saods9,
savi,
sextractor,
skycat,
+ splash,
stardata-common,
stellarium,
wcslib-tools,
wcstools,
+ wxastrocapture,
xpa-tools,
xplanet,
yale,
yorick-full
-Suggests: audela,
+Suggests: astroml,
+ astroquery,
+ audela,
casacore-tools,
cpl-plugin-amber,
cpl-plugin-fors,
@@ -150,12 +155,12 @@ Suggests: audela,
scilab-overload,
scilab-scimysql,
seesat5,
+ sncosmo,
spacechart,
ssystem,
stars,
sunclock,
worldwind,
- wxastrocapture,
x11iraf,
xephem,
xorsa,
@@ -171,6 +176,7 @@ Description: Debian Science Astronomy packages
and, depending on your focus, in the education-astronomy metapackage.
Package: science-astronomy-dev
+Section: metapackages
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
Recommends: libastro-fits-cfitsio-perl,
@@ -180,7 +186,6 @@ Recommends: libastro-fits-cfitsio-perl,
libcpl-dev,
liberfa-dev,
libfits-java,
- libgyoto1-dev,
libnova-dev,
libqfits-dev,
libstarlink-ast-dev,
@@ -194,6 +199,7 @@ Recommends: libastro-fits-cfitsio-perl,
tcl-fitstcl,
wcslib-dev
Suggests: casacore-dev,
+ libgyoto1-dev,
libhealipx-cxx-dev,
libivoafits-java,
libworldwind-java,
@@ -205,6 +211,7 @@ Description: Debian Science Astronomy-dev packages
You might also be interested in the science-astronomy metapackage.
Package: science-biology
+Section: metapackages
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
Recommends: bauble,
@@ -225,6 +232,7 @@ Description: Debian Science Biology packages
general Debian Science.
Package: science-chemistry
+Section: metapackages
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
Recommends: adun.app,
@@ -297,6 +305,7 @@ Description: Debian Science Chemistry packages
metapackage.
Package: science-dataacquisition
+Section: metapackages
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
Recommends: engauge-digitizer,
@@ -335,17 +344,20 @@ Description: Debian Science data acquisition packages
science-viewing and science-typesetting).
Package: science-dataacquisition-dev
+Section: metapackages
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
Recommends: liblog4tango5-dev,
libtango8-dev
-Suggests: libnarval1-dev
+Suggests: libnarval1-dev,
+ python-xrayutilities
Description: Debian Science data acquisition development packages
This metapackage will install Debian Science packages which are helpful
to develop applications related to data acquisition. This might be
used in several sciences.
Package: science-distributedcomputing
+Section: metapackages
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
Recommends: dmtcp,
@@ -355,6 +367,7 @@ Recommends: dmtcp,
gridengine-exec,
gridengine-master,
gridengine-qmon,
+ htcondor,
ipython,
mpich,
mpich2python,
@@ -363,8 +376,7 @@ Recommends: dmtcp,
python-mpi,
torque-common,
torque-server
-Suggests: condor,
- coop-computing-tools,
+Suggests: coop-computing-tools,
hpcc,
nordugrid-arc-nox,
octave-mpi,
@@ -376,6 +388,7 @@ Description: Debian Science Distributed Computing packages
and parallel-computing.
Package: science-economics
+Section: metapackages
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
Recommends: dynare,
@@ -443,11 +456,13 @@ Description: Debian Science Economics packages
of popular non-free systems (such as MATLAB, Mathematica, Stata or SAS).
Package: science-electronics
+Section: metapackages
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
Recommends: arduino,
arduino-core,
avrdude,
+ berkeley-abc,
confluence,
covered,
drawtiming,
@@ -470,10 +485,12 @@ Recommends: arduino,
iverilog,
kicad,
linsmith,
+ magic,
ngspice,
oregano,
pcb,
qelectrotech,
+ qrouter,
qsapecng,
simulpic,
texlive-latex-extra,
@@ -495,10 +512,12 @@ Suggests: geda-doc,
klogic,
ksimus,
libfeel++-dev,
+ qflow,
qucs,
vbpp,
vbs,
- xsmc-calc
+ xsmc-calc,
+ yosys
Description: Debian Science Electronics packages
This metapackage will install Debian Science packages related to
Electronics. You might also be interested in the field::electronics
@@ -506,6 +525,7 @@ Description: Debian Science Electronics packages
metapackage.
Package: science-electrophysiology
+Section: metapackages
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
Recommends: libdrawtk-dev,
@@ -553,6 +573,7 @@ Description: Debian Science packages for Electrophysiology
software that might be useful for electrophysiology research.
Package: science-engineering
+Section: metapackages
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
Recommends: cba,
@@ -611,6 +632,7 @@ Description: Debian Science Engineering packages
related software.
Package: science-engineering-dev
+Section: metapackages
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
Recommends: code-saturne-bin,
@@ -648,10 +670,11 @@ Recommends: code-saturne-bin,
libsilo-dev,
libslepc3.4.2-dev,
libslicot-dev,
+ libug-dev,
libxdmf-dev,
python-collada,
- python-fftw3 | python3-fftw3,
python-netcdf,
+ r-cran-rnetcdf,
salome-kernel-dev,
syfi-dev
Suggests: libdiet-admin2.8-dev,
@@ -667,7 +690,9 @@ Suggests: libdiet-admin2.8-dev,
libtet1.4-dev,
openturns-examples,
pycgns,
+ python-fftw3,
python-nfft3,
+ python3-fftw3,
python3-nfft3
Description: Debian Science Engineering-dev packages
This metapackage will install Debian Science packages which might be
@@ -676,6 +701,7 @@ Description: Debian Science Engineering-dev packages
You might also be interested in the science-engineering metapackage.
Package: science-financial
+Section: metapackages
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
Recommends: r-cran-fasianoptions,
@@ -701,6 +727,7 @@ Description: Debian Science financial engineering and computational finance
engineering and computational finance.
Package: science-geography
+Section: metapackages
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
Recommends: avce00,
@@ -735,7 +762,6 @@ Recommends: avce00,
php5-mapscript,
phppgadmin,
postgis,
- postgresql-9.3-postgis-2.1,
proj-bin,
python-mapnik,
qgis,
@@ -752,6 +778,7 @@ Suggests: drawmap,
googleearth-package,
grace6,
openjump,
+ postgresql-9.3-postgis-2.1,
sumo
Description: Debian Science Geography packages
This metapackage will install Debian Science packages related to
@@ -760,6 +787,7 @@ Description: Debian Science Geography packages
metapackage.
Package: science-geometry
+Section: metapackages
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
Recommends: carmetal,
@@ -777,6 +805,7 @@ Description: Debian Science geometry packages
metapackage.
Package: science-highenergy-physics
+Section: metapackages
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
Recommends: cernlib,
@@ -898,6 +927,7 @@ Description: Debian Science High Energy Physics packages
your focus, in the physics and education-physics metapackages.
Package: science-highenergy-physics-dev
+Section: metapackages
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
Recommends: cernlib-base-dev,
@@ -993,6 +1023,7 @@ Description: Debian Science High Energy Physics development packages
your focus, in the physics and education-physics metapackages.
Package: science-imageanalysis
+Section: metapackages
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
Recommends: gpiv,
@@ -1014,6 +1045,7 @@ Description: Debian Science image analysis packages
and science-typesetting).
Package: science-linguistics
+Section: metapackages
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
Recommends: apertium,
@@ -1037,7 +1069,9 @@ Suggests: frogdata,
libtimbl4-dev,
libtimblserver2-dev,
libucto1-dev,
+ python-nltk,
python-timbl,
+ python3-nltk,
travatar,
wnsqlbuilder
Description: Debian Science Linguistics packages
@@ -1045,6 +1079,7 @@ Description: Debian Science Linguistics packages
and installs packages related to Linguistics.
Package: science-logic
+Section: metapackages
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
Recommends: agda,
@@ -1079,6 +1114,7 @@ Description: Debian Science Logic packages
various logics, interactive proof systems, etc.
Package: science-machine-learning
+Section: metapackages
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
Recommends: autoclass,
@@ -1146,6 +1182,7 @@ Description: Debian Science Machine Learning packages
implementing dominant nowadays statistical methods.
Package: science-mathematics
+Section: metapackages
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
Recommends: agda,
@@ -1163,6 +1200,7 @@ Recommends: agda,
freemat,
gap,
gap-character-tables,
+ gap-float,
gap-guava,
gap-prim-groups,
gap-small-groups,
@@ -1188,7 +1226,6 @@ Recommends: agda,
nauty,
netgen,
octave,
- pari-extra,
pari-gp,
polybori,
polybori-gui,
@@ -1219,7 +1256,6 @@ Recommends: agda,
Suggests: ann-tools,
cliquer,
eprover,
- gap-float,
gap-gapdoc,
gap-online-help,
isabelle,
@@ -1228,6 +1264,7 @@ Suggests: ann-tools,
matlab-support,
netgen-doc,
octaviz,
+ pari-extra,
proofgeneral-coq,
r-cran-evd,
sagemath,
@@ -1240,11 +1277,11 @@ Description: Debian Science Mathematics packages
metapackage.
Package: science-mathematics-dev
+Section: metapackages
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
Recommends: code-saturne-bin,
code-saturne-include,
- dolfin-dev,
fflas-ffpack,
fftw-dev,
gap-dev,
@@ -1312,13 +1349,13 @@ Recommends: code-saturne-bin,
libsuitesparse-metis-dev,
libsuperlu-dev,
libtnt-dev,
+ libug-dev,
libviennacl-dev,
minpack-dev,
petsc-dev,
python-dolfin,
python-ferari,
python-ffc,
- python-fftw3 | python3-fftw3,
python-glpk,
python-linop | python3-linop,
python-numexpr | python3-numexpr,
@@ -1326,11 +1363,16 @@ Recommends: code-saturne-bin,
python-openopt,
python-openturns,
python-polybori,
+ python-pynfft | python3-pynfft,
+ python-pyoperators | python3-pyoperators,
+ python-pyviennacl,
python-ufc,
python-ufl,
+ python3-pyviennacl,
sfftw-dev,
ufc
Suggests: cfortran,
+ dolfin-dev,
fflas-ffpack-dev-doc,
fflas-ffpack-user-doc,
givaro-dev-doc,
@@ -1352,8 +1394,8 @@ Suggests: cfortran,
libtet1.4.2-dev,
libtrilinos-dev,
openturns-examples,
- python-pynfft,
- python3-pynfft
+ python-fftw3,
+ python3-fftw3
Description: Debian Science Mathematics-dev packages
This metapackage will install Debian Science packages which might be
helpful for development of applications for Mathematics.
@@ -1361,6 +1403,7 @@ Description: Debian Science Mathematics-dev packages
You might also be interested in the science-mathematics metapackage.
Package: science-meteorology
+Section: metapackages
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
Recommends: aweather,
@@ -1399,6 +1442,7 @@ Description: Debian Science Meteorology packages
and installs packages related to Meteorology and Climate.
Package: science-meteorology-dev
+Section: metapackages
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
Recommends: fftw-dev,
@@ -1431,6 +1475,7 @@ Recommends: fftw-dev,
libwreport-dev,
netcdf-bin,
python-openturns,
+ r-cran-rnetcdf,
sfftw-dev,
wcslib-dev,
wcslib-doc
@@ -1446,6 +1491,7 @@ Description: Debian Science Meteorology-dev packages
You might also be interested in the science-meteorology metapackage.
Package: science-nanoscale-physics
+Section: metapackages
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
Recommends: abinit,
@@ -1456,7 +1502,6 @@ Recommends: abinit,
cp2k,
drawxtl,
etsf-io,
- extrema,
feynmf,
fityk,
garlic,
@@ -1471,10 +1516,10 @@ Recommends: abinit,
gwyddion,
horae,
ifeffit,
- libblas3gf,
+ libblas3,
libfftw3-3,
libgsl0ldbl,
- liblapack3gf,
+ liblapack3,
maxima,
mayavi2,
mpqc,
@@ -1487,6 +1532,7 @@ Recommends: abinit,
psi3,
pymca,
python-ase,
+ python-lmfit | python3-lmfit,
python-scientific,
python-scipy,
python-scitools,
@@ -1501,10 +1547,12 @@ Recommends: abinit,
Suggests: ape,
atompaw,
bigdft,
+ crystfel,
dx,
dx-doc,
espresso++,
exciting,
+ extrema,
fdmnes,
feel++-apps,
gmsh,
@@ -1543,6 +1591,7 @@ Description: Debian Science Nanoscale Physics packages
your focus, in the physics and education-physics metapackages.
Package: science-nanoscale-physics-dev
+Section: metapackages
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
Recommends: abinit-doc,
@@ -1569,15 +1618,18 @@ Recommends: abinit-doc,
libroot-montecarlo-vmc-dev,
libroot-tmva-dev,
libscalapack-mpi-dev,
+ libssm-dev,
libxc-dev,
netcdf-doc,
pyfai,
python-fabio,
+ r-cran-rnetcdf,
root-system,
scalapack-doc,
science-mathematics-dev,
sfftw-dev
-Suggests: libfeel++-dev,
+Suggests: crystfel-dev,
+ libfeel++-dev,
libfftw3-doc,
libfox95,
libnbc,
@@ -1587,6 +1639,7 @@ Suggests: libfeel++-dev,
libxc,
oce-draw,
python-netcdf,
+ python-xrayutilities,
spglib,
wannier90-dev
Description: Debian Science Nanoscale Physics development packages
@@ -1598,6 +1651,7 @@ Description: Debian Science Nanoscale Physics development packages
metapackages.
Package: science-neuroscience-cognitive
+Section: metapackages
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
Recommends: amide,
@@ -1613,10 +1667,16 @@ Recommends: amide,
mricron,
nifti-bin,
openmeeg-tools,
+ openwalnut-qt4,
praat,
psignifit,
+ python-dicom,
+ python-dipy,
python-mvpa2,
python-nibabel,
+ python-nipy,
+ python-nipype,
+ python-nitime,
python-pyepl,
python-pypsignifit,
python-pyxnat,
@@ -1656,6 +1716,7 @@ Description: Debian Science packages for Cognitive Neuroscience
might be useful in the context of cognitive neuroscience.
Package: science-neuroscience-modeling
+Section: metapackages
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
Recommends: cnrun,
@@ -1679,6 +1740,7 @@ Description: Debian Science packages for modeling of neural systems
useful for neuroscience research.
Package: science-numericalcomputation
+Section: metapackages
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
Recommends: admesh,
@@ -1707,6 +1769,7 @@ Recommends: admesh,
python-demgengeo,
python-gts,
python-guiqwt,
+ python-lmfit | python3-lmfit,
python-matplotlib,
python-numpy,
python-scipy,
@@ -1742,6 +1805,7 @@ Description: Debian Science Numerical Computation packages
as Matlab and IDL.
Package: science-physics
+Section: metapackages
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
Recommends: abinit | mpqc | openmx | psi3,
@@ -1803,6 +1867,7 @@ Description: Debian Science Physics packages
your focus, in education-physics metapackage.
Package: science-physics-dev
+Section: metapackages
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
Recommends: fftw-dev,
@@ -1812,15 +1877,16 @@ Recommends: fftw-dev,
libnfft3-dev,
libopenctm-dev,
pyfai,
- python-fftw3 | python3-fftw3,
python-multipletau | python3-multipletau,
python-openctm,
+ python-pynfft | python3-pynfft,
python-quantities,
sfftw-dev
Suggests: libismrmrd-dev,
libtriangle-dev,
- python-pynfft,
- python3-pynfft
+ python-fftw3,
+ python-xrayutilities,
+ python3-fftw3
Description: Debian Science Physics-dev packages
This metapackage will install Debian Science packages which might be
helpful for development of applications for Mathematics.
@@ -1828,6 +1894,7 @@ Description: Debian Science Physics-dev packages
You might also be interested in the science-physics metapackage.
Package: science-presentation
+Section: metapackages
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
Recommends: latex-beamer,
@@ -1838,6 +1905,7 @@ Description: Debian Science generic tools for presentations
useful for doing presentations for instance on scientific conferences.
Package: science-psychophysics
+Section: metapackages
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
Recommends: libfreenect-dev,
@@ -1869,11 +1937,14 @@ Description: Debian Science packages for Psychophysics
frameworks including stimuli delivery.
Package: science-robotics
+Section: metapackages
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
Recommends: choreonoid,
liburdfdom-tools,
morse-simulator,
+ octomap-tools,
+ octovis,
robot-player,
rtai,
xenomai-runtime
@@ -1884,8 +1955,6 @@ Suggests: arduino-mk,
libcoin60-runtime,
libvtk5.4,
octave,
- octomap-tools,
- octovis,
ompl-demos,
openhrp,
openrave,
@@ -1907,6 +1976,7 @@ Description: Debian Robotics packages
You might also be interested in the science-engineering metapackage.
Package: science-robotics-dev
+Section: metapackages
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
Recommends: libccd-dev,
@@ -1914,6 +1984,7 @@ Recommends: libccd-dev,
libcomedi-dev,
libconsole-bridge-dev,
libcv-dev,
+ liboctomap-dev,
libode-dev,
libompl-dev,
libopenigtlink-dev,
@@ -1924,14 +1995,14 @@ Recommends: libccd-dev,
liburdfdom-headers-dev,
libvisp-dev,
python-comedilib
-Suggests: liboctomap-dev,
- visp-images-data
+Suggests: visp-images-data
Description: Debian Robotics development packages
This metapackage is part of the Debian Pure Blend "Debian Science"
and installs packages that are relevant to develop applications
for robotics.
Package: science-simulations
+Section: metapackages
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
Recommends: esys-particle,
@@ -1950,6 +2021,7 @@ Description: Debian Science Simulation packages
used to do simulations in different fields of science.
Package: science-social
+Section: metapackages
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
Recommends: opensesame
@@ -1958,6 +2030,7 @@ Description: Debian Science social sciences packages
sciences.
Package: science-statistics
+Section: metapackages
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
Recommends: ess,
@@ -1968,6 +2041,7 @@ Recommends: ess,
python-scipy,
python-statsmodels,
r-cran-abind,
+ r-cran-acepack,
r-cran-amore,
r-cran-bayesm,
r-cran-boot,
@@ -1981,6 +2055,7 @@ Recommends: ess,
r-cran-dbi,
r-cran-deldir,
r-cran-eco,
+ r-cran-ecodist,
r-cran-effects,
r-cran-energy,
r-cran-expm,
@@ -2042,6 +2117,7 @@ Recommends: ess,
r-cran-sandwich,
r-cran-sm,
r-cran-snow,
+ r-cran-spam,
r-cran-spatstat,
r-cran-statmod,
r-cran-strucchange,
@@ -2059,12 +2135,9 @@ Recommends: ess,
rkward
Suggests: libtamuanova-dev,
python-stats,
- r-cran-acepack,
- r-cran-ecodist,
r-cran-fcalendar,
r-cran-fecofin,
r-cran-rpvm,
- r-cran-spam,
r-cran-spc,
rstudio,
science-mathematics
@@ -2077,6 +2150,7 @@ Description: Debian Science Statistics packages
to optionally install all mathematics related software.
Package: science-typesetting
+Section: metapackages
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
Recommends: auctex,
@@ -2128,6 +2202,7 @@ Description: Debian Science typesetting packages
debtag.
Package: science-viewing
+Section: metapackages
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
Recommends: 3depict,
@@ -2158,6 +2233,7 @@ Recommends: 3depict,
plotdrop,
python-gnuplot,
python-guiqwt,
+ python-pyqtgraph,
python-scientific,
python-seaborn,
python-viper,
@@ -2196,6 +2272,7 @@ Suggests: cassandra,
r-cran-labeling,
r-cran-plotrix,
r-cran-scales,
+ r-cran-scatterplot3d,
tcl-vtk,
texlive-pictures,
visit,
@@ -2206,6 +2283,7 @@ Description: Debian Science data visualisation packages
debtag.
Package: science-viewing-dev
+Section: metapackages
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
Recommends: gnudatalanguage,
@@ -2217,6 +2295,7 @@ Recommends: gnudatalanguage,
libgrits-dev,
libgtkdatabox-0.9.2-0-dev,
libgtkdataboxmm-dev,
+ libplplot-dev,
libqglviewer-dev,
libqtexengine-dev,
libqwtplot3d-qt4-dev,
@@ -2224,14 +2303,20 @@ Recommends: gnudatalanguage,
libvtk-java,
libvtk5-dev,
libvtk5-qt4-dev,
+ libvtk6-dev,
+ libvtk6-java,
pdl,
python-gnuplot,
python-matplotlib,
python-pivy,
+ python-plplot-qt,
python-qwt3d-qt4,
python-scientific,
python-scitools,
python-vtk,
+ python-vtk6,
+ python3-skimage,
+ python3-skimage-lib,
tcl-vtk,
vtk-examples
Description: Debian Science development of visualisation applications
diff --git a/debian/control.stub b/debian/control.stub
index c1fe412..0b24bd3 100644
--- a/debian/control.stub
+++ b/debian/control.stub
@@ -6,10 +6,10 @@ Uploaders: Frederic Daniel Luc Lehobey <Frederic at Lehobey.net>,
Andreas Tille <tille at debian.org>,
Sylvestre Ledru <sylvestre at debian.org>
Build-Depends-Indep: blends-dev (>= 0.6.15)
-Standards-Version: 3.9.5
-Homepage: http://wiki.debian.org/DebianScience/
-Vcs-Browser: http://anonscm.debian.org/gitweb/?p=blends/projects/science.git
+Standards-Version: 3.9.6
+Vcs-Browser: https://anonscm.debian.org/cgit/blends/projects/science.git
Vcs-Git: git://anonscm.debian.org/blends/projects/science.git
+Homepage: http://wiki.debian.org/DebianScience/
Package: science-tasks
Architecture: all
--
Debian Science Blend
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