[Blends-commit] [SCM] med branch, master, updated. 995e5823a960673507aac016512c079179dc6e04
Andreas Tille
tille at debian.org
Tue Sep 1 20:48:23 UTC 2015
The following commit has been merged in the master branch:
commit a0e1fec6eca74f923c096e1bd8277e949cbfe7de
Author: Andreas Tille <tille at debian.org>
Date: Tue Sep 1 17:43:18 2015 +0200
Prepare next release
diff --git a/debian-med-tasks.desc b/debian-med-tasks.desc
index 88d6d97..6324529 100644
--- a/debian-med-tasks.desc
+++ b/debian-med-tasks.desc
@@ -4,246 +4,255 @@ Description: Debian Med micro-biology packages
This metapackage will install Debian packages related to molecular biology,
structural biology and bioinformatics for use in life sciences.
Relevance: 10
-Enhances: t-coffee
-Key:
+Key:
med-bio
Packages: list
- altree
- fastdnaml
- njplot
- tree-puzzle
- probalign
- treeviewx
+ abacas
+ acedb-other
+ acedb-other-belvu
+ acedb-other-dotter
+ aegean
+ aevol
+ alien-hunter
+ altree
+ amap-align
+ ampliconnoise
+ anfo
+ aragorn
+ arden
+ autodock
+ autodock-vina
+ autogrid
+ bamtools
+ barrnap
+ bedtools
+ biomaj
+ blast2
+ bowtie
+ bowtie2
+ boxshade
+ bwa
+ cassiopee
+ cd-hit
+ cdbfasta
+ chimeraslayer
+ circos
+ clearcut
+ clonalframe
+ clustalo
+ clustalw
+ clustalx
+ concavity
+ conservation-code
+ dialign
+ dialign-tx
+ discosnp
+ disulfinder
+ dnaclust
+ dssp
+ ecopcr
+ edtsurf
+ embassy-domainatrix
+ embassy-domalign
+ embassy-domsearch
+ emboss
+ exonerate
+ fastaq
+ fastdnaml
+ fastlink
+ fastqc
+ fasttree
+ fastx-toolkit
+ ffindex
figtree
- phylip
- fastlink
- loki
- plink
- r-cran-qtl
- r-cran-genabel
- amap-align
- boxshade
- fastx-toolkit
- gff2aplot
- muscle
- sim4
- sibsim4
- tabix
- tophat
- wise
- maqview
- bwa
- mummer
- blast2
- ncbi-blast+
- mafft
- sra-toolkit
- t-coffee
- kalign
- hmmer
- exonerate
- dialign
- dialign-tx
- poa
- probcons
- proda
- seaview
- sigma-align
- emboss
- embassy-domalign
- embassy-domainatrix
- embassy-domsearch
- clustalx
- clustalo
- clustalw
- mothur
- bowtie
- bowtie2
- transtermhp
- last-align
- maq
- ssake
- velvet
- qiime
- infernal
- rnahybrid
- adun.app
- garlic
- gamgi
- gdpc
- ghemical
- jmol
- pymol
- r-other-bio3d
- massxpert
- gromacs
- rasmol
- plasmidomics
- gff2ps
- ncbi-epcr
- ncbi-tools-bin
- ncbi-tools-x11
- perlprimer
- readseq
- tigr-glimmer
- melting
- mipe
- primer3
+ filo
+ flexbar
+ freecontact
+ gamgi
+ garlic
gbrowse
- biomaj
- glam2
- raster3d
- phyml
- autodock
- autogrid
- autodock-vina
- mustang
- probabel
- theseus
- staden-io-lib-utils
- samtools
- bedtools
- filo
- r-bioc-hilbertvis
- r-other-mott-happy.hbrem
- snp-sites
- mira-assembler
- alien-hunter
- seqan-apps
- ncoils
- gentle
- picard-tools
- acedb-other-dotter
- acedb-other-belvu
- acedb-other
- python-cogent
- velvetoptimiser
- mrbayes
- pdb2pqr
- squizz
- clonalframe
- dssp
- jellyfish
- ballview
- pynast
- raxml
- mlv-smile
- cd-hit
- r-bioc-cummerbund
+ gdpc
+ genometools
+ gentle
+ gff2aplot
+ gff2ps
+ ghemical
+ giira
+ glam2
grinder
+ gromacs
+ gwama
+ hhsuite
+ hmmer
+ hmmer2
+ hyphy-mpi
+ hyphygui
+ idba
+ infernal
+ ipig
jalview
- reprof
- tm-align
+ jellyfish
+ jmol
+ kalign
+ kissplice
+ kmer
+ last-align
+ librg-utils-perl
+ logol-bin
+ loki
+ ltrsift
+ macs
+ macsyfinder
+ mafft
+ mapsembler2
+ maq
+ maqview
+ massxpert
+ mauve-aligner
+ melting
+ metastudent
+ microbegps
+ microbiomeutil
+ minia
+ mipe
+ mira-assembler
+ mlv-smile
+ mothur
+ mrbayes
+ mrs
+ mummer
+ murasaki
+ muscle
+ mustang
+ nast-ier
+ ncbi-blast+
+ ncbi-epcr
+ ncbi-seg
+ ncbi-tools-bin
+ ncbi-tools-x11
+ ncoils
+ neobio
+ njplot
norsnet
norsp
+ paraclu
+ parsinsert
+ pdb2pqr
+ perlprimer
+ perm
+ phylip
+ phyml
+ phyutility
+ picard-tools
+ plasmidomics
+ plink
+ poa
+ populations
+ prank
predictnls
- prime-phylo
- proftmb
+ predictprotein
+ prime-phylo
+ primer3
+ proalign
+ probabel
+ probalign
+ probcons
+ proda
+ prodigal
profbval
profisis
- hhsuite
- ffindex
- flexbar
- neobio
- ray
- logol-bin
- soapdenovo
- soapdenovo2
- microbiomeutil
- chimeraslayer
- nast-ier
- wigeon
- minia
- trimmomatic
- saint
- rtax
- rate4site
- rna-star
- topp
- openms
- scythe
- arden
- fitgcp
- gasic
- giira
- ipig
- aevol
- anfo
- aragorn
- bamtools
- cassiopee
- cdbfasta
- clearcut
- edtsurf
- fasttree
- fastaq
- fastqc
- freecontact
- genometools
- gwama
- hmmer2
- idba
- kissplice
- ltrsift
- macs
- macsyfinder
- progressivemauve
- metastudent
- mrs
- murasaki
- ncbi-seg
- paraclu
- parsinsert
- perm
- phyutility
- prank
- predictprotein
- proalign
- prodigal
- pycorrfit
- pyscanfcs
- r-bioc-rtracklayer
+ profnet-bval
+ profnet-chop
+ profnet-con
+ profnet-isis
+ profnet-md
+ profnet-norsnet
+ profnet-prof
+ profnet-snapfun
+ profphd
+ profphd-net
+ profphd-utils
+ proftmb
+ progressivemauve
+ pycorrfit
+ pymol
+ pynast
+ pyscanfcs
+ python-cogent
+ qiime
+ r-bioc-annotate
+ r-bioc-biostrings
+ r-bioc-cummerbund
+ r-bioc-edger
r-bioc-gviz
- r-bioc-biostrings
- r-cran-vegan
- relion-bin
+ r-bioc-hilbertvis
+ r-bioc-limma
+ r-bioc-rtracklayer
+ r-cran-ape
+ r-cran-genabel
+ r-cran-phangorn
+ r-cran-qtl
+ r-cran-seqinr
+ r-cran-vegan
+ r-other-bio3d
+ r-other-mott-happy.hbrem
+ rasmol
+ raster3d
+ rate4site
+ raxml
+ ray
rdp-alignment
+ rdp-classifier
rdp-readseq
- seqtk
- smalt
- staden
- subread
- swarm
- toppred
+ readseq
+ relion-bin
+ relion-bin+gui
+ reprof
+ rna-star
+ rnahybrid
+ rtax
+ saint
+ samtools
+ scythe
+ seaview
+ seqan-apps
+ seqtk
+ sibsim4
+ sickle
+ sigma-align
+ sim4
+ smalt
+ snap
+ snp-sites
+ soapdenovo
+ soapdenovo2
+ squizz
+ sra-toolkit
+ ssake
+ staden
+ staden-io-lib-utils
+ subread
+ swarm
+ t-coffee
+ tabix
+ theseus
+ tigr-glimmer
+ tm-align
+ tophat
+ toppred
transdecoder
- uc-echo
- vsearch
- zalign
- discosnp
- mapsembler2
- dnaclust
- concavity
- conservation-code
- r-cran-ape
- abacas
- profnet-bval
- profnet-chop
- profnet-con
- profnet-isis
- profnet-md
- profnet-norsnet
- profnet-prof
- profnet-snapfun
- profphd-net
- profphd-utils
- profphd
- ampliconnoise
- disulfinder
- circos
- populations
- librg-utils-perl
- snap
- vcftools
+ transtermhp
+ tree-puzzle
+ treeviewx
+ trimmomatic
+ uc-echo
+ vcftools
+ velvet
+ velvetoptimiser
+ vsearch
+ wigeon
+ wise
+ zalign
Task: med-bio-dev
Section: debian-med
@@ -251,77 +260,80 @@ Description: Debian Med packages for development of micro-biology applications
This metapackage will install Debian packages which might be helpful
for development of applications for micro-biological research.
Relevance: 10
-Key:
+Key:
med-bio-dev
Packages: list
bioperl
bioperl-run
- libncbi6-dev
- mcl
- biosquid
- libvibrant6-dev
- python-biopython
- python-cogent
- python-screed
- ruby-bio
+ biosquid
+ libace-perl
+ libai-fann-perl
+ libbambamc-dev
+ libbamtools-dev
+ libbio-graphics-perl
+ libbio-mage-perl
+ libbio-mage-utils-perl
+ libbio-primerdesigner-perl
+ libbiococoa-dev
libbiojava-java
libbiojava3-java
- libgenome-1.3-dev
- libmuscle-3.7-dev
- libmems-1.6-dev
- libai-fann-perl
- libbio-mage-perl
- libnhgri-blastall-perl
- libtfbs-perl
- libfreecontact0-dev
- libfreecontact-perl
+ libbiojava4-java
+ libchado-perl
+ libffindex0-dev
+ libfreecontact-perl
+ libfreecontact0-dev
+ libgenome-1.3-dev
+ libgenome-model-tools-music-perl
+ libgenome-perl
+ libgenometools0-dev
libgo-perl
- r-cran-genetics
- r-cran-haplo.stats
- libbio-graphics-perl
- libbio-primerdesigner-perl
- libace-perl
- libbiococoa-dev
- libstaden-read-dev
- libsrf-dev
- libzerg0-dev
- libzerg-perl
+ libhmsbeagle-dev
+ libhts-dev
+ libjebl2-java
+ libkmer-dev
+ libmems-1.6-dev
+ libmuscle-3.7-dev
+ libncbi6-dev
+ libnhgri-blastall-perl
+ libpal-java
+ librcsb-core-wrapper0-dev
+ librdp-taxonomy-tree-java
+ librelion-dev
+ librg-blast-parser-perl
librg-reprof-bundle-perl
- python-corepywrap
- librcsb-core-wrapper0-dev
- libsbml5-dev
+ librostlab-blast0-dev
+ librostlab3-dev
+ libsbml5-dev
+ libsnp-sites1-dev
+ libsort-key-top-perl
+ libsrf-dev
+ libssm-dev
+ libstaden-read-dev
+ libtfbs-perl
+ libvibrant6-dev
+ libzerg-perl
+ libzerg0-dev
+ mcl
+ pyfai
+ python-biom-format
+ python-biopython
+ python-cobra
+ python-cogent
+ python-corepywrap
+ python-csb
+ python-freecontact
+ python-htseq
+ python-mmtk
+ python-rdkit
+ python-screed
+ python3-hyphy
+ python3-ruffus
+ r-bioc-biobase
+ r-cran-genetics
+ r-cran-haplo.stats
+ ruby-bio
sbmltoolbox
seqan-dev
- libbio-mage-utils-perl
- libchado-perl
- libpal-java
- libjebl2-java
- r-bioc-biobase
- libffindex0-dev
- librostlab3-dev
- librostlab-blast0-dev
- librg-blast-parser-perl
- libsort-key-top-perl
- libhmsbeagle-dev
- libbambamc-dev
- libbamtools-dev
- python-mmtk
- libopenms-dev
- libgenometools0-dev
- librdp-taxonomy-tree-java
- python-biom-format
- python-rdkit
- libgenome-perl
- libgenome-model-tools-music-perl
- pyfai
- libhts-dev
- python-htseq
- python-csb
- python-freecontact
- libsnp-sites1-dev
- libssm-dev
- librelion-dev
- python-pysam
Task: med-bio-ngs
Section: debian-med
@@ -330,11 +342,28 @@ Description: Debian Med bioinformatics applications usable in Next Generation Se
sequences produced by next generation sequencing.
Relevance: 10
Packages: list
- mothur
- qiime
- mira-assembler
- kissplice
- uc-echo
+ bedtools
+ bowtie
+ bwa
+ fastx-toolkit
+ filo
+ kissplice
+ last-align
+ maq
+ mira-assembler
+ mothur
+ picard-tools
+ qiime
+ r-bioc-edger
+ r-bioc-hilbertvis
+ samtools
+ sra-toolkit
+ ssake
+ tabix
+ tophat
+ uc-echo
+ vcftools
+ velvet
Task: med-bio-phylogeny
Section: debian-med
@@ -345,34 +374,32 @@ Description: Debian Med phylogeny packages
related software.
Relevance: 10
Packages: list
- altree
- fastdnaml
- njplot
- tree-puzzle
- probalign
- treeviewx
- phylip
- muscle
- t-coffee
- kalign
- hmmer
- exonerate
- dialign
- dialign-tx
- poa
- probcons
- proda
- seaview
- sigma-align
- clustalx
- clustalw
- mustang
- phyml
- tm-align
- mrbayes
+ altree
+ clustalw
+ clustalx
+ dialign
+ dialign-tx
+ exonerate
+ fastdnaml
figtree
- populations
- proalign
+ hmmer
+ kalign
+ mrbayes
+ muscle
+ mustang
+ njplot
+ phyml
+ poa
+ populations
+ proalign
+ probalign
+ probcons
+ proda
+ sigma-align
+ t-coffee
+ tm-align
+ tree-puzzle
+ treeviewx
Task: med-cloud
Section: debian-med
@@ -382,89 +409,151 @@ Description: Debian Med bioinformatics applications usable in cloud computing
depend on graphical toolkits and therefore can fit on system images for use
in cloud computing clusters, where space can be limited.
Relevance: 10
-Key:
+Key:
med-cloud
Packages: list
- altree
- clearcut
- fastdnaml
- fasttree
- parsinsert
- phyml
- phyutility
+ acedb-other
+ aevol
alien-hunter
- fastlink
- loki
- gasic
- genometools
- plink
- amap-align
- blast2
- biosquid
- boxshade
- cassiopee
- cdbfasta
- cd-hit
- bamtools
- bedtools
- fastx-toolkit
- flexbar
- picard-tools
- samtools
- anfo
- bowtie
- bowtie2
- bwa
- last-align
- maq
- perm
- tophat
- smalt
- mapsembler2
- idba
- minia
- mira-assembler
- ssake
- velvet
- ampliconnoise
- arden
- fastqc
- discosnp
- dnaclust
- fitgcp
- giira
- grinder
- kissplice
- macs
- mothur
- aragorn
- infernal
- rnahybrid
- rtax
- autodock
- autodock-vina
- autogrid
- concavity
- dssp
- freecontact
- melting
- mipe
- ncbi-epcr
- primer3
- acedb-other
- disulfinder
- ncbi-tools-bin
- ncoils
- python-cogent
- aevol
+ altree
+ amap-align
+ ampliconnoise
+ anfo
+ aragorn
+ arden
+ autodock
+ autodock-vina
+ autogrid
+ bamtools
+ bedtools
biomaj
bioperl
bioperl-run
+ biosquid
+ blast2
+ bowtie
+ bowtie2
+ boxshade
+ bwa
cain
- clonalframe
+ cassiopee
+ cd-hit
+ cdbfasta
circos
- datamash
- filo
+ clearcut
+ clonalframe
+ clustalo
+ clustalw
+ concavity
+ conservation-code
+ datamash
+ dialign
+ dialign-tx
+ discosnp
+ disulfinder
+ dnaclust
+ dssp
+ embassy-domainatrix
+ embassy-domalign
+ embassy-domsearch
+ emboss
+ exonerate
+ fastdnaml
+ fastlink
+ fastqc
+ fasttree
+ fastx-toolkit
+ filo
+ flexbar
+ freecontact
+ genometools
+ gff2aplot
+ gff2ps
+ giira
+ glam2
+ grinder
+ gromacs
+ hhsuite
+ hmmer
+ idba
+ infernal
+ jellyfish
+ kalign
+ kissplice
+ last-align
+ loki
+ macs
+ mafft
+ mapsembler2
+ maq
+ melting
+ minia
+ mipe
+ mira-assembler
+ mlv-smile
+ mothur
+ mrbayes
+ mummer
+ muscle
+ mustang
+ ncbi-epcr
+ ncbi-tools-bin
+ ncoils
+ neobio
+ paraclu
+ parsinsert
+ pdb2pqr
+ perm
+ phyml
+ phyutility
+ picard-tools
+ plink
+ poa
+ prank
+ prime-phylo
+ primer3
+ probabel
+ probcons
+ proda
+ prodigal
+ pynast
+ python-biopython
+ python-cogent
+ python3-biopython
+ qiime
+ r-bioc-edger
+ r-bioc-hilbertvis
+ r-cran-pvclust
+ r-cran-qtl
+ r-cran-vegan
+ r-other-mott-happy.hbrem
+ raster3d
+ readseq
+ rnahybrid
+ rtax
+ samtools
+ seqan-apps
+ sibsim4
+ sigma-align
+ sim4
+ smalt
+ snap
+ soapdenovo
+ soapdenovo2
+ squizz
+ sra-toolkit
+ ssake
+ staden-io-lib-utils
+ t-coffee
+ tabix
+ theseus
+ tigr-glimmer
+ tophat
+ tree-puzzle
+ vcftools
+ velvet
+ wise
+ zalign
Task: med-cms
Section: debian-med
@@ -481,10 +570,10 @@ Description: Debian Med drug databases
applications. The database can be accessed by any EMR using
the application.
Relevance: 10
-Key:
+Key:
med-data
Packages: list
- freediams
+ freediams
freemedforms-freedata
python-hl7
@@ -494,12 +583,11 @@ Description: Debian Med packages related to dental practice
This metapackage contains dependencies for a collection of software
which might be helpful for dentists to manage their practice.
Relevance: 10
-Key:
+Key:
med-dental
Packages: list
- openmolar
imagetooth
- entangle
+ openmolar
Task: med-epi
Section: debian-med
@@ -510,18 +598,17 @@ Description: Debian Med epidemiology related packages
"A short introduction to R for Epidemiology" at
http://staff.pubhealth.ku.dk/%7Ebxc/Epi/R-intro.pdf
Relevance: 10
-Key:
+Key:
med-epi
Packages: list
epigrass
- r-cran-epibasix
- r-cran-epitools
- r-cran-surveillance
- r-cran-epi
r-cran-diagnosismed
+ r-cran-epi
+ r-cran-epibasix
r-cran-epicalc
r-cran-epir
- r-cran-seroincidence
+ r-cran-epitools
+ r-cran-surveillance
Task: med-his
Section: debian-med
@@ -532,7 +619,7 @@ Description: Debian Med suggestions for Hospital Information Systems
only preconditions are finished but hopefully helpful in hospitals
anyway.
Relevance: 10
-Key:
+Key:
med-his
Packages: list
fis-gtm
@@ -558,62 +645,56 @@ Description: Debian Med imaging packages
where you'll find direct links to the most recent yearly edition
ftp://medical.nema.org/medical/dicom/2008/ .
Relevance: 10
-Key:
+Key:
med-imaging
Packages: list
- amide
- ctsim
- ctn
- dicomnifti
+ aeskulap
+ amide
+ biosig-tools
+ caret
+ conquest-common
+ ctn
+ ctsim
+ dcmtk
+ dicom3tools
+ dicomnifti
+ dicomscope
+ fslview
+ gdf-tools
+ gwyddion
imagej
- minc-tools
- medcon
- python-nibabel
+ imagevis3d
+ invesalius
+ king
+ libgdcm-tools
+ medcon
+ mia-tools
+ mia-viewit
+ mialmpick
+ minc-tools
+ mriconvert
+ mricron
+ mrtrix
+ nifti-bin
+ odin
+ openslide-tools
+ orthanc
+ pixelmed-apps
+ plastimatch
python-dicom
- xmedcon
- dcmtk
- nifti-bin
- aeskulap
- fslview
- gwyddion
- sofa-apps
+ python-dipy
python-mvpa2
+ python-nibabel
python-nipy
python-nipype
- caret
- libgdcm-tools
- dicom3tools
- imagevis3d
- odin
- dicomscope
- pixelmed-apps
- gofigure2
- ginkgocadx
- openslide-tools
- conquest-common
- camitk-imp
- orthanc
- teem-apps
- invesalius
- mricron
- voxbo
- mrtrix
- ants
- itksnap
- mriconvert
- mia-tools
- mialmpick
- mia-viewit
- ismrmrd-tools
- sigviewer
- plastimatch
- biosig-tools
- python-surfer
- king
- vtk-dicom-tools
- gdf-tools
python-nitime
- python-dipy
+ python-surfer
+ sigviewer
+ sofa-apps
+ teem-apps
+ voxbo
+ vtk-dicom-tools
+ xmedcon
Task: med-imaging-dev
Section: debian-med
@@ -621,54 +702,55 @@ Description: Debian Med packages for medical image development
This metapackage will install Debian packages which might be useful
for developing applications for medical image processing.
Relevance: 10
-Key:
+Key:
med-imaging-dev
Packages: list
- ctn-dev
cimg-dev
- libminc-dev
- libmdc2-dev
- libvtk5-dev
- libnifti-dev
- libinsighttoolkit3-dev
- libvolpack1-dev
- libgdcm2-dev
- python-gdcm
+ ctn-dev
+ gmic
+ libactiviz.net-cil
+ libbiosig-dev
+ libcv-dev
+ libedf-dev
+ libgdf-dev
+ libgiftiio-dev
+ libinsighttoolkit3-dev
+ libismrmrd-dev
+ libmaxflow-dev
+ libmdc2-dev
+ libmia-2.2-dev
+ libmialm-dev
+ libmiaviewit-dev
+ libminc-dev
+ libnifti-dev
+ libopenslide-dev
+ libpapyrus3-dev
+ libteem-dev
+ libvigraimpex-dev
+ libvistaio-dev
+ libvolpack1-dev
+ libvtk-dicom-java
+ libvtk-dicom0.5-dev
+ libvtk5-dev
+ libvxl1-dev
+ octave-gdf
+ odin
+ python-casmoothing
+ python-cfflib
+ python-dicom
+ python-dipy
+ python-gdcm
+ python-mia
+ python-mne
python-mvpa2
+ python-nibabel
python-nipy
python-nipype
python-nitime
- python-casmoothing
- odin
- libcv-dev
- libvxl1-dev
- libteem-dev
- gmic
- libgiftiio-dev
- libactiviz.net-cil
- libvistaio-dev
- libmia-2.2-dev
- libmiaviewit-dev
- libmialm-dev
- python-mia
- r-cran-rniftilib
- python-dicom
- python-nibabel
- libgdf-dev
- octave-gdf
- python-pyxnat
- python-dipy
- libbiosig-dev
- python-cfflib
- libopenslide-dev
python-openslide
- libcamitk3-dev
- libpapyrus3-dev
- python-mne
- libvigraimpex-dev
- python-vigra
- libedf-dev
- libismrmrd-dev
+ python-pyxnat
+ python-vigra
+ r-cran-rniftilib
Task: med-laboratory
Section: debian-med
@@ -676,10 +758,10 @@ Description: Debian Med suggestions for medical laboratories
This metapackage contains dependencies for software and that could
be useful ro run a medical laboratory.
Relevance: 10
-Key:
+Key:
med-laboratory
Packages: list
- opencfu
+ opencfu
Task: med-oncology
Section: debian-med
@@ -687,7 +769,7 @@ Description: Debian Med packages for oncology
This metapackage will install tools that are useful for radiation
oncology.
Relevance: 10
-Key:
+Key:
med-oncology
Packages: list
dicompyler
@@ -699,11 +781,10 @@ Description: Debian Med packages for pharmaceutical research
collection of software and documentation which is useful for
pharmaceutical research.
Relevance: 10
-Key:
+Key:
med-pharmacy
Packages: list
- chemtool
- r-cran-dosefinding
+ chemtool
Task: med-physics
Section: debian-med
@@ -713,15 +794,15 @@ Description: Debian Med packages for medical physicists
medical physicists in radiation oncology, diagnostics imaging
and related fields.
Relevance: 10
-Key:
+Key:
med-physics
Packages: list
- paw++
- paw
- octave
+ biosig-tools
+ gdf-tools
+ octave
+ paw
+ paw++
r-base
- biosig-tools
- gdf-tools
Task: med-practice
Section: debian-med
@@ -729,18 +810,16 @@ Description: Debian Med packages for practice management
This metapackage contains dependencies for a collection of software
which might be helpful for practitioners to manage their practice.
Relevance: 10
-Key:
+Key:
med-practice
Packages: list
+ freediams
+ freemedforms-emr
gnumed-client
gnumed-server
- libchipcard-tools
- ginkgocadx
- freediams
- freemedforms-emr
- r-cran-medadherence
- entangle
- qrisk2
+ libchipcard-tools
+ qrisk2
+ r-cran-medadherence
Task: med-psychology
Section: debian-med
@@ -748,15 +827,15 @@ Description: Debian Med packages for psychology
This metapackage contains dependencies for a collection of software
which might be helpful for psychological research.
Relevance: 10
-Key:
+Key:
med-psychology
Packages: list
- python-pyepl
- praat
- r-cran-foreign
- psignifit
- r-cran-psy
+ praat
+ psignifit
psychopy
+ python-pyepl
+ r-cran-foreign
+ r-cran-psy
Task: med-rehabilitation
Section: debian-med
@@ -764,10 +843,10 @@ Description: Debian Med packages for rehabilitation technologies
This metapackage will install tools that are useful for
rehabilitation and therapy.
Relevance: 10
-Key:
+Key:
med-rehabilitation
Packages: list
- sitplus
+ sitplus
Task: med-statistics
Section: debian-med
@@ -775,15 +854,14 @@ Description: Debian Med statistics
This metapackage will install packages which are helpful to do statistics
with a special focus on tasks in medical care.
Relevance: 10
-Key:
+Key:
med-statistics
Packages: list
- r-bioc-edger
- r-bioc-limma
+ r-bioc-edger
+ r-bioc-limma
r-bioc-qvalue
- r-cran-randomforest
- r-cran-beeswarm
r-cran-pvclust
+ r-cran-randomforest
Task: med-tools
Section: debian-med
@@ -791,21 +869,21 @@ Description: Debian Med several tools
This metapackage will install tools for several purposes in health care.
Currently it contains some simple programs for Personal Health.
Relevance: 10
-Key:
+Key:
med-tools
Packages: list
- pcalendar
- pondus
- wgerman-medical
+ cronometer
+ edfbrowser
hunspell-de-med
- quitcount
- workrave
- edfbrowser
hunspell-en-med
- python-clips
- cronometer
+ nut-nutrition
+ pcalendar
+ pondus
+ python-clips
python-fitbit
- nut-nutrition
+ quitcount
+ wgerman-medical
+ workrave
Task: med-typesetting
Section: debian-med
@@ -814,10 +892,10 @@ Description: Debian Med support for typesetting and publishing
for typesetting and publishing in medical care and structural
biology.
Relevance: 10
-Key:
+Key:
med-typesetting
Packages: list
- texlive-science
- texlive-latex-extra
king
+ texlive-latex-extra
+ texlive-science
diff --git a/debian/changelog b/debian/changelog
index 2f91122..0a3024c 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -1,3 +1,34 @@
+debian-med (2.2) UNRELEASED; urgency=medium
+
+ * Moved to Git
+
+ * start of automatic changelog entry *
+
+ * Changes in metapackage dependencies
+ -med-tools
+ removed:
+ Depends: python3-fitbitscraper
+ -med-bio
+ added:
+ Depends: sortmerna, r-bioc-limma, r-cran-metamix, iqtree, relion-bin+gui | relion-bin+mpi+gui, berkeley-express, daligner, mhap, sumatra, hyphy-mpi | hyphy-pt, python-pbalign, bio-rainbow, python-kineticstools, ea-utils, suitename, wgsim, r-bioc-annotate, r-bioc-edger, adun-core, r-bioc-genefilter, hyphygui, sumtrees, blasr, repeatmasker-recon, pbdagcon, relion-bin | relion-bin+mpi, axe-demultiplexer, tantan
+ Suggests: adun.app
+ removed:
+ Depends: relion-bin | relion-bin-mpi, express, relion-gui, hyphy, adun.app
+ -med-imaging-dev
+ added:
+ Depends: libvtk-dicom-java, libmaxflow-dev, libvtk-dicom0.5-dev
+ Suggests: liblimereg-dev
+ removed:
+ Depends: libvtk-dicom0.4-dev
+ Suggests: limereg-dev
+ -med-bio-dev
+ added:
+ Depends: libdivsufsort-dev, python3-cutadapt | python-cutadapt, python3-skbio | python-skbio, python3-dendropy | python-dendropy, python3-ruffus | python-ruffus, python3-hyphy | python-hyphy
+ removed:
+ Depends: librdp-readseq-java, librdp-alignment-java, python-ruffus, python-dendropy
+
+ -- Andreas Tille <tille at debian.org> Tue, 01 Sep 2015 17:40:57 +0200
+
debian-med (2.1) unstable; urgency=medium
* Build-Depends: blends-dev (>= 0.6.92.3) to enable respecting user PATH
diff --git a/debian/control b/debian/control
index 2ffcea0..c40ea0c 100644
--- a/debian/control
+++ b/debian/control
@@ -54,438 +54,363 @@ Description: Debian Med general config package
Debian by simply installing the relevant metapackage
Package: med-bio
-Section: metapackages
-Architecture: all
+Architecture: any
+Section: metapackage
+Priority: extra
Depends: med-tasks (= ${binary:Version}), med-config (= ${binary:Version})
Recommends: abacas,
- acedb-other,
- acedb-other-belvu,
- acedb-other-dotter,
- adun.app,
- aevol,
+ acedb-other [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ acedb-other-belvu [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ acedb-other-dotter [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ aegean [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ aevol [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
alien-hunter,
- altree,
- amap-align,
- ampliconnoise,
- anfo,
- aragorn,
- arden,
- autodock,
- autodock-vina,
- autogrid,
- ballview,
- bamtools,
- bedtools,
+ altree [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ amap-align [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ ampliconnoise [!s390 !hurd-i386 !kfreebsd-amd64 !s390x !sparc !ia64 !kfreebsd-i386],
+ anfo [!s390 !hurd-i386 !kfreebsd-amd64 !ppc64el !sparc !arm64 !ia64 !kfreebsd-i386],
+ aragorn [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ arden [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ autodock [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ autodock-vina [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ autogrid [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ bamtools [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ barrnap,
+ bedtools [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
biomaj,
- blast2,
- bowtie,
- bowtie2,
- boxshade,
- bwa,
- cassiopee,
- cd-hit,
- cdbfasta,
+ blast2 [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ bowtie [!s390 !hurd-i386 !kfreebsd-amd64 !s390x !powerpc !sparc !armel !armhf !arm64 !ia64 !mips !kfreebsd-i386 !mipsel !i386],
+ bowtie2 [!s390 !hurd-i386 !kfreebsd-amd64 !s390x !powerpc !ppc64el !sparc !armel !armhf !arm64 !ia64 !mips !kfreebsd-i386 !mipsel !i386],
+ boxshade [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ bwa [!s390 !hurd-i386 !kfreebsd-amd64 !s390x !powerpc !ppc64el !sparc !armel !armhf !arm64 !ia64 !mips !kfreebsd-i386 !mipsel !i386],
+ cassiopee [!s390 !hurd-i386 !kfreebsd-amd64 !s390x !sparc !ia64 !kfreebsd-i386],
+ cd-hit [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ cdbfasta [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
chimeraslayer,
circos,
- clearcut,
- clonalframe,
- clustalo,
- clustalw,
- clustalx,
- concavity,
+ clearcut [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ clonalframe [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ clustalo [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ clustalw [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ clustalx [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ concavity [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
conservation-code,
- dialign,
- dialign-tx,
- discosnp,
- disulfinder,
- dnaclust,
- dssp,
- edtsurf,
- embassy-domainatrix,
- embassy-domalign,
- embassy-domsearch,
- emboss,
- exonerate,
+ dialign [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ dialign-tx [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ discosnp [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ disulfinder [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ dnaclust [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ dssp [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ ecopcr [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ edtsurf [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ embassy-domainatrix [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ embassy-domalign [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ embassy-domsearch [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ emboss [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ exonerate [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
fastaq,
- fastdnaml,
- fastlink,
+ fastdnaml [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ fastlink [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
fastqc,
- fasttree,
- fastx-toolkit,
- ffindex,
+ fasttree [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ fastx-toolkit [!s390 !hurd-i386 !kfreebsd-amd64 !powerpc !sparc !ia64 !kfreebsd-i386],
+ ffindex [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
figtree,
- filo,
- fitgcp,
- flexbar,
- freecontact,
- gamgi,
- garlic,
- gasic,
+ filo [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ flexbar [!s390 !hurd-i386 !kfreebsd-amd64 !s390x !sparc !armel !ia64 !mips !kfreebsd-i386 !mipsel],
+ freecontact [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ gamgi [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ garlic [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
gbrowse,
- gdpc,
- genometools,
- gentle,
- gff2aplot,
+ gdpc [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ genometools [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ gentle [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ gff2aplot [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
gff2ps,
- ghemical,
- giira,
- glam2,
+ ghemical [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !arm64 !ia64 !kfreebsd-i386],
+ giira [!s390 !hurd-i386 !kfreebsd-amd64 !s390x !powerpc !ppc64el !sparc !armel !armhf !arm64 !ia64 !mips !kfreebsd-i386 !mipsel !i386],
+ glam2 [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
grinder,
- gromacs,
- gwama,
- hhsuite,
- hmmer,
- hmmer2,
- idba,
- infernal,
- ipig,
+ gromacs [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ gwama [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ hhsuite [!s390 !hurd-i386 !kfreebsd-amd64 !s390x !powerpc !ppc64el !sparc !armel !armhf !arm64 !ia64 !mips !kfreebsd-i386 !mipsel !i386],
+ hmmer [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ hmmer2 [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ hyphy-mpi [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386] | hyphy-pt [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ hyphygui [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ idba [!s390 !hurd-i386 !kfreebsd-amd64 !powerpc !sparc !ia64 !kfreebsd-i386],
+ infernal [!s390 !hurd-i386 !kfreebsd-amd64 !s390x !powerpc !ppc64el !sparc !armel !armhf !ia64 !mips !kfreebsd-i386 !mipsel !arm64],
+ ipig [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
jalview,
- jellyfish,
+ jellyfish [!s390 !hurd-i386 !kfreebsd-amd64 !s390x !powerpc !ppc64el !sparc !armel !armhf !arm64 !ia64 !mips !kfreebsd-i386 !mipsel !i386],
jmol,
- kalign,
- kissplice,
- last-align,
+ kalign [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ kissplice [!s390 !hurd-i386 !kfreebsd-amd64 !s390x !powerpc !sparc !armel !armhf !ia64 !mips !kfreebsd-i386 !mipsel !i386],
+ kmer [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ last-align [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
librg-utils-perl,
- logol-bin,
- loki,
- ltrsift,
- macs,
+ logol-bin [!s390 !hurd-i386 !kfreebsd-amd64 !s390x !sparc !ia64 !mips !kfreebsd-i386 !mipsel],
+ loki [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ ltrsift [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ macs [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
macsyfinder,
- mafft,
- mapsembler2,
- maq,
- maqview,
- massxpert,
- melting,
+ mafft [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ mapsembler2 [!s390 !hurd-i386 !kfreebsd-amd64 !powerpc !sparc !ia64 !mips !kfreebsd-i386 !mipsel],
+ maq [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ maqview [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ massxpert [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ mauve-aligner [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ melting [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
metastudent,
+ microbegps [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
microbiomeutil,
- minia,
+ minia [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
mipe,
- mira-assembler,
- mlv-smile,
- mothur,
- mrbayes,
- mrs,
- mummer,
- murasaki,
- muscle,
- mustang,
- nast-ier,
- ncbi-blast+,
- ncbi-epcr,
- ncbi-seg,
- ncbi-tools-bin,
- ncbi-tools-x11,
- ncoils,
+ mira-assembler [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ mlv-smile [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ mothur [!s390 !hurd-i386 !kfreebsd-amd64 !s390x !sparc !ia64 !kfreebsd-i386],
+ mrbayes [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ mrs [!s390 !hurd-i386 !kfreebsd-amd64 !s390x !powerpc !ppc64el !sparc !armel !armhf !arm64 !ia64 !mips !kfreebsd-i386 !mipsel !i386],
+ mummer [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ murasaki [!s390 !hurd-i386 !kfreebsd-amd64 !s390x !sparc !ia64 !kfreebsd-i386],
+ muscle [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ mustang [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ nast-ier [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ ncbi-blast+ [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ ncbi-epcr [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ ncbi-seg [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ ncbi-tools-bin [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ ncbi-tools-x11 [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ ncoils [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
neobio,
- njplot,
+ njplot [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
norsnet,
norsp,
- openms,
- paraclu,
- parsinsert,
- pdb2pqr,
+ paraclu [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ parsinsert [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ pdb2pqr [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
perlprimer,
- perm,
- phylip,
- phyml,
- phyutility,
+ perm [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ phylip [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ phyml [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ phyutility [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
picard-tools,
plasmidomics,
- plink,
- poa,
- populations,
- prank,
+ plink [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ poa [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ populations [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ prank [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
predictnls,
predictprotein,
- prime-phylo,
- primer3,
- proalign,
- probabel,
- probalign,
- probcons,
- proda,
- prodigal,
+ prime-phylo [!s390 !hurd-i386 !kfreebsd-amd64 !s390x !sparc !ia64 !kfreebsd-i386],
+ primer3 [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ proalign [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ probabel [!s390 !hurd-i386 !kfreebsd-amd64 !s390x !powerpc !sparc !ia64 !mips !kfreebsd-i386],
+ probalign [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ probcons [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ proda [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ prodigal [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !armhf !ia64 !kfreebsd-i386],
profbval,
profisis,
- profnet-bval,
- profnet-chop,
- profnet-con,
- profnet-isis,
- profnet-md,
- profnet-norsnet,
- profnet-prof,
- profnet-snapfun,
+ profnet-bval [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ profnet-chop [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ profnet-con [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ profnet-isis [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ profnet-md [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ profnet-norsnet [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ profnet-prof [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ profnet-snapfun [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
profphd,
- profphd-net,
- profphd-utils,
- proftmb,
- progressivemauve,
- pycorrfit,
- pymol,
+ profphd-net [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ profphd-utils [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ proftmb [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ progressivemauve [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ pycorrfit [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ pymol [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
pynast,
- pyscanfcs,
- python-cogent,
- qiime,
- r-bioc-biostrings,
+ pyscanfcs [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ python-cogent [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ qiime [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ r-bioc-annotate [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ r-bioc-biostrings [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
r-bioc-cummerbund,
+ r-bioc-edger [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
r-bioc-gviz,
- r-bioc-hilbertvis,
- r-bioc-rtracklayer,
- r-cran-ape,
- r-cran-genabel,
- r-cran-qtl,
- r-cran-vegan,
+ r-bioc-hilbertvis [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ r-bioc-limma [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ r-bioc-rtracklayer [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ r-cran-ape [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ r-cran-genabel [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ r-cran-phangorn [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ r-cran-qtl [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ r-cran-seqinr [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ r-cran-vegan [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
r-other-bio3d,
- r-other-mott-happy.hbrem,
- rasmol,
- raster3d,
- rate4site,
- raxml,
- ray,
+ r-other-mott-happy.hbrem [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ rasmol [!s390 !hurd-i386 !kfreebsd-amd64 !ppc64el !sparc !ia64 !kfreebsd-i386],
+ raster3d [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ rate4site [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ raxml [!s390 !hurd-i386 !kfreebsd-amd64 !s390x !powerpc !ppc64el !sparc !armel !armhf !ia64 !mips !kfreebsd-i386 !mipsel !arm64],
+ ray [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
rdp-alignment,
+ rdp-classifier,
rdp-readseq,
- readseq,
- relion-bin,
+ readseq [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ relion-bin [!s390 !hurd-i386 !kfreebsd-amd64 !s390x !powerpc !ppc64el !sparc !armel !armhf !ia64 !mips !kfreebsd-i386 !mipsel !arm64] | relion-bin+mpi [!s390 !hurd-i386 !kfreebsd-amd64 !s390x !powerpc !ppc64el !sparc !armel !armhf !ia64 !mips !kfreebsd-i386 !mipsel !arm64],
+ relion-bin+gui [!s390 !hurd-i386 !kfreebsd-amd64 !s390x !powerpc !ppc64el !sparc !armel !armhf !ia64 !mips !kfreebsd-i386 !mipsel !arm64] | relion-bin+mpi+gui [!s390 !hurd-i386 !kfreebsd-amd64 !s390x !powerpc !ppc64el !sparc !armel !armhf !ia64 !mips !kfreebsd-i386 !mipsel !arm64],
reprof,
- rna-star,
- rnahybrid,
+ rna-star [!s390 !hurd-i386 !kfreebsd-amd64 !s390x !powerpc !sparc !armhf !ia64 !mips !kfreebsd-i386],
+ rnahybrid [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
rtax,
- saint,
- samtools,
- scythe,
- seaview,
- seqan-apps,
- seqtk,
- sibsim4,
- sigma-align,
- sim4,
- smalt,
- snap,
- snp-sites,
- soapdenovo,
- soapdenovo2,
- squizz,
- sra-toolkit,
+ saint [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ samtools [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !armel !ia64 !kfreebsd-i386],
+ scythe [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ seaview [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ seqan-apps [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !armel !ia64 !kfreebsd-i386],
+ seqtk [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ sibsim4 [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ sickle [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ sigma-align [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ sim4 [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ smalt [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ snap [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ snp-sites [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ soapdenovo [!s390 !hurd-i386 !kfreebsd-amd64 !s390x !powerpc !ppc64el !sparc !armel !armhf !arm64 !ia64 !mips !kfreebsd-i386 !mipsel !i386],
+ soapdenovo2 [!s390 !hurd-i386 !kfreebsd-amd64 !s390x !powerpc !ppc64el !sparc !armel !armhf !arm64 !ia64 !mips !kfreebsd-i386 !mipsel !i386],
+ squizz [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ sra-toolkit [!s390 !hurd-i386 !kfreebsd-amd64 !s390x !powerpc !ppc64el !sparc !armel !armhf !ia64 !mips !kfreebsd-i386 !mipsel !arm64],
ssake,
- staden,
- staden-io-lib-utils,
- subread,
- swarm,
- t-coffee,
- tabix,
- theseus,
- tigr-glimmer,
- tm-align,
- tophat,
- topp,
- toppred,
+ staden [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ staden-io-lib-utils [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ subread [!s390 !hurd-i386 !kfreebsd-amd64 !s390x !powerpc !sparc !ia64 !mips !kfreebsd-i386],
+ swarm [!s390 !hurd-i386 !kfreebsd-amd64 !s390x !powerpc !ppc64el !sparc !armel !armhf !arm64 !ia64 !mips !kfreebsd-i386 !mipsel !i386],
+ t-coffee [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ tabix [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ theseus [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ tigr-glimmer [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ tm-align [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ tophat [!s390 !hurd-i386 !kfreebsd-amd64 !s390x !powerpc !ppc64el !sparc !armel !armhf !arm64 !ia64 !mips !kfreebsd-i386 !mipsel !i386],
+ toppred [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
transdecoder,
- transtermhp,
- tree-puzzle | tree-ppuzzle,
- treeviewx,
+ transtermhp [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ tree-puzzle [!s390 !hurd-i386 !kfreebsd-amd64 !s390x !sparc !arm64 !ia64 !kfreebsd-i386] | tree-ppuzzle [!s390 !hurd-i386 !kfreebsd-amd64 !s390x !sparc !arm64 !ia64 !kfreebsd-i386],
+ treeviewx [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
trimmomatic,
- uc-echo,
- vcftools,
- velvet,
+ uc-echo [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ vcftools [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ velvet [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
velvetoptimiser,
- vsearch,
+ vsearch [!s390 !hurd-i386 !kfreebsd-amd64 !s390x !powerpc !ppc64el !sparc !armel !armhf !arm64 !ia64 !mips !kfreebsd-i386 !mipsel !i386],
wigeon,
- wise,
- zalign
+ wise [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ zalign [!s390 !hurd-i386 !kfreebsd-amd64 !s390x !sparc !ia64 !kfreebsd-i386]
Suggests: abyss,
acacia,
- act,
- aegean,
+ adun.app,
amos-assembler,
- amoscmp,
apollo,
- arachne,
arb,
- artemis,
- asap,
- augustus,
autodocktools,
+ axe-demultiplexer,
axparafit,
axpcoords,
bagpipe,
- bambus,
- barrnap,
- beads,
+ ballview,
beast-mcmc,
biceps,
- big-blast,
bigsdb,
biomaj-watcher,
bitseq,
+ blasr,
blat,
blimps-utils,
- blixem,
- btk-core,
- cactus,
- caftools,
cain,
- cap3,
- cdna-db,
cinema,
clonalorigin,
clustalw-mpi,
cluster3,
- cmap,
- coalesce,
- codonw,
- compclust,
- contralign,
coot,
- copycat,
crac,
crossbow,
cufflinks,
cytoscape,
- das-proserver,
dazzle,
- decipher,
- e-hive,
+ ea-utils,
ecell,
- ecopcr,
eigensoft,
- elph,
embassy-phylip,
emboss-explorer,
emmax,
emperor,
ensembl,
- est-db,
- estferret,
- estscan,
- exalt,
- excavator,
express,
- fasta,
fasta3,
fastml2,
- figaro,
- finex,
- fluctuate,
+ fitgcp,
forester,
- forge,
freebayes,
fsa,
- galaxy,
+ gasic,
gassst,
gatk,
- gbioseq,
- gbrowse-syn,
- genemark,
- genesplicer,
- genetrack,
- genezilla,
- genographer,
- glimmerhmm,
gmap,
- gmv,
grabix,
grogui,
gubbins,
haploview,
hawkeye,
- hexamer,
- hilbertvisgui,
htqc,
- hyphy,
igv,
iva,
jaligner,
jbrowse,
- jigsaw,
- jstreeview,
kclust,
kempbasu,
khmer,
- kmer,
lagan,
- lamarc,
logomat-m,
- lucy,
mach-haplotyper,
mage2tab,
- maker2,
martj,
maude,
- mauve-aligner,
- maxd,
melting-gui,
meme,
- mesquite,
- metarep,
metastudent-data,
metastudent-data-2,
metastudent-data-3,
- microbegps,
- migrate,
- minimus,
- mirbase,
mobyle,
mobyle-programs,
mobyle-tutorials,
- modeller,
molekel,
mosaik-aligner,
mpsqed,
- msatfinder,
mugsy,
- mummergpu,
- mview,
ngila,
ngsqctoolkit,
nw-align,
oases,
obitools,
- obo-edit,
- oligoarrayaux,
- omegamap,
- operondb,
+ openms,
pal2nal,
paml,
- partigene,
patman,
patristic,
pcma,
- pfaat,
- pftools,
- phagefinder,
- phpphylotree,
- phylographer,
phyloviz-core,
- phylowin,
plato,
plip,
profit,
prokka,
- prot4est,
pscan-tfbs,
psipred,
- pyrophosphate-tools,
- python-orange,
python-reaper,
- qtlcart,
r-bioc-ebseq,
+ r-bioc-genefilter,
r-cran-boolnet,
- r-cran-phangorn,
- r-cran-seqinr,
r-other-apmswapp,
r-other-valdar-bagphenotype.library,
r8s,
raccoon,
- rbs-finder,
- rdp-classifier,
- recombine,
- relion-bin-mpi,
- relion-gui,
- repeatmasker,
- rmblast,
- roche454ace2caf,
- rose,
rosetta,
rsem,
sap,
@@ -493,237 +418,315 @@ Suggests: abyss,
seqprep,
sequenceconverter.app,
sga,
- sickle,
sift,
situs,
smrtanalysis,
snpeff,
+ sortmerna,
spades,
- spice,
- splitstree,
spread-phy,
ssaha,
stacks,
strap,
strap-base,
+ suitename,
+ sumatra,
+ sumtrees,
tacg,
- taverna,
- taxinspector,
- tetra,
- tigr-assembler,
+ tantan,
tigr-glimmer-mg,
- trace2dbest,
- tracetuner,
- treebuilder3d,
- treetime,
+ topp,
treeview,
trinityrnaseq,
- tripal,
- trnascan-se,
- twain,
ugene,
unc-fish,
- uniprime,
varscan,
vienna-rna,
vmd,
wgs-assembler,
- x-tandem-pipeline,
+ wgsim,
zodiac-zeden
Description: Debian Med micro-biology packages
This metapackage will install Debian packages related to molecular biology,
structural biology and bioinformatics for use in life sciences.
Package: med-bio-dev
-Section: metapackages
-Architecture: all
+Architecture: any
+Section: metapackage
+Priority: extra
Depends: med-tasks (= ${binary:Version}), med-config (= ${binary:Version})
Recommends: bioperl,
bioperl-run,
- biosquid,
- libace-perl,
- libai-fann-perl,
- libbambamc-dev,
- libbamtools-dev,
+ biosquid [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ libace-perl [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ libai-fann-perl [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ libbambamc-dev [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ libbamtools-dev [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
libbio-graphics-perl,
libbio-mage-perl,
libbio-mage-utils-perl,
libbio-primerdesigner-perl,
- libbiococoa-dev,
+ libbiococoa-dev [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
libbiojava-java,
libbiojava3-java,
+ libbiojava4-java,
libchado-perl,
- libffindex0-dev,
- libfreecontact-perl,
- libfreecontact0-dev,
- libgenome-1.3-dev,
+ libffindex0-dev [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ libfreecontact-perl [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ libfreecontact0-dev [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ libgenome-1.3-dev [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
libgenome-model-tools-music-perl,
libgenome-perl,
- libgenometools0-dev,
+ libgenometools0-dev [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
libgo-perl,
- libhmsbeagle-dev,
- libhts-dev,
+ libhmsbeagle-dev [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ libhts-dev [!s390 !hurd-i386 !kfreebsd-amd64 !s390x !powerpc !sparc !armhf !ia64 !mips !kfreebsd-i386],
libjebl2-java,
- libmems-1.6-dev,
- libmuscle-3.7-dev,
- libncbi6-dev,
+ libkmer-dev [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ libmems-1.6-dev [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ libmuscle-3.7-dev [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ libncbi6-dev [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
libnhgri-blastall-perl,
- libopenms-dev,
libpal-java,
- librcsb-core-wrapper0-dev,
+ librcsb-core-wrapper0-dev [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
librdp-taxonomy-tree-java,
- librelion-dev,
- librg-blast-parser-perl,
+ librelion-dev [!s390 !hurd-i386 !kfreebsd-amd64 !s390x !powerpc !ppc64el !sparc !armel !armhf !ia64 !mips !kfreebsd-i386 !mipsel !arm64],
+ librg-blast-parser-perl [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
librg-reprof-bundle-perl,
- librostlab-blast0-dev,
- librostlab3-dev,
- libsbml5-dev,
- libsnp-sites1-dev,
- libsort-key-top-perl,
- libsrf-dev,
- libssm-dev,
- libstaden-read-dev,
- libtfbs-perl,
- libvibrant6-dev,
- libzerg-perl,
- libzerg0-dev,
- mcl,
- pyfai,
- python-biom-format,
- python-biopython | python3-biopython,
- python-cogent,
- python-corepywrap,
+ librostlab-blast0-dev [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ librostlab3-dev [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ libsbml5-dev [!s390 !hurd-i386 !kfreebsd-amd64 !powerpc !ppc64el !sparc !arm64 !ia64 !mips !kfreebsd-i386 !mipsel],
+ libsnp-sites1-dev [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ libsort-key-top-perl [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ libsrf-dev [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ libssm-dev [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ libstaden-read-dev [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ libtfbs-perl [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ libvibrant6-dev [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ libzerg-perl [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ libzerg0-dev [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ mcl [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ pyfai [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ python-biom-format [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ python-biopython [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386] | python3-biopython [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ python-cobra [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ python-cogent [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ python-corepywrap [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
python-csb | python3-csb,
- python-freecontact,
- python-htseq,
- python-mmtk,
- python-pysam,
- python-rdkit,
+ python-freecontact [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ python-htseq [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ python-mmtk [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ python-rdkit [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
python-screed,
- r-bioc-biobase,
+ python3-hyphy [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386] | python-hyphy [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ python3-ruffus | python-ruffus,
+ r-bioc-biobase [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
r-cran-genetics,
- r-cran-haplo.stats,
+ r-cran-haplo.stats [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
ruby-bio,
sbmltoolbox,
seqan-dev
-Suggests: bioclipse,
- libbio-das-perl,
- libbiojava4-java,
+Suggests: libbio-das-perl,
+ libdivsufsort-dev,
libforester-java,
libfreecontact-doc,
- libgbfp-dev,
- libgff-perl,
libgtextutils-dev,
- libkmer-dev,
- librdp-alignment-java,
- librdp-readseq-java,
+ libopenms-dev,
librostlab-blast-doc,
librostlab-doc,
libswarm2-dev,
libtabixpp,
libvcflib,
- octace-bioinfo,
python-biopython-doc,
python-biopython-sql | python3-biopython-sql,
- python-cobra,
- python-dendropy,
python-miso,
python-pbcore,
python-pbh5tools,
- python-ruffus,
+ python-pysam,
+ python3-dendropy | python-dendropy,
+ python3-skbio | python-skbio,
r-bioc-affy,
+ r-bioc-affyio,
+ r-bioc-altcdfenvs,
+ r-bioc-annotationdbi,
+ r-bioc-biocgenerics,
+ r-bioc-biomart,
+ r-bioc-biovizbase,
+ r-bioc-bsgenome,
+ r-bioc-genomeinfodb,
+ r-bioc-genomicalignments,
+ r-bioc-genomicfeatures,
+ r-bioc-genomicranges,
+ r-bioc-graph,
+ r-bioc-hypergraph,
+ r-bioc-iranges,
+ r-bioc-makecdfenv,
+ r-bioc-preprocesscore,
+ r-bioc-rsamtools,
+ r-bioc-shortread,
+ r-bioc-snpstats,
+ r-bioc-variantannotation,
+ r-bioc-xvector,
r-cran-rocr
Description: Debian Med packages for development of micro-biology applications
This metapackage will install Debian packages which might be helpful
for development of applications for micro-biological research.
Package: med-cloud
-Section: metapackages
-Architecture: all
+Architecture: any
+Section: metapackage
+Priority: extra
Depends: med-tasks (= ${binary:Version}), med-config (= ${binary:Version})
-Recommends: acedb-other,
- aevol,
+Recommends: acedb-other [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ aevol [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
alien-hunter,
- altree,
- amap-align,
- ampliconnoise,
- anfo,
- aragorn,
- arden,
- autodock,
- autodock-vina,
- autogrid,
- bamtools,
- bedtools,
+ altree [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ amap-align [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ ampliconnoise [!s390 !hurd-i386 !kfreebsd-amd64 !s390x !sparc !ia64 !kfreebsd-i386],
+ anfo [!s390 !hurd-i386 !kfreebsd-amd64 !ppc64el !sparc !arm64 !ia64 !kfreebsd-i386],
+ aragorn [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ arden [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ autodock [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ autodock-vina [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ autogrid [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ bamtools [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ bedtools [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
biomaj,
bioperl,
bioperl-run,
- biosquid,
- blast2,
- bowtie,
- bowtie2,
- boxshade,
- bwa,
+ biosquid [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ blast2 [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ bowtie [!s390 !hurd-i386 !kfreebsd-amd64 !s390x !powerpc !sparc !armel !armhf !arm64 !ia64 !mips !kfreebsd-i386 !mipsel !i386],
+ bowtie2 [!s390 !hurd-i386 !kfreebsd-amd64 !s390x !powerpc !ppc64el !sparc !armel !armhf !arm64 !ia64 !mips !kfreebsd-i386 !mipsel !i386],
+ boxshade [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ bwa [!s390 !hurd-i386 !kfreebsd-amd64 !s390x !powerpc !ppc64el !sparc !armel !armhf !arm64 !ia64 !mips !kfreebsd-i386 !mipsel !i386],
cain,
- cassiopee,
- cd-hit,
- cdbfasta,
+ cassiopee [!s390 !hurd-i386 !kfreebsd-amd64 !s390x !sparc !ia64 !kfreebsd-i386],
+ cd-hit [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ cdbfasta [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
circos,
- clearcut,
- clonalframe,
- concavity,
- datamash,
- discosnp,
- disulfinder,
- dnaclust,
- dssp,
- fastdnaml,
- fastlink,
+ clearcut [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ clonalframe [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ clustalo [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ clustalw [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ concavity [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ conservation-code,
+ datamash [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ dialign [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ dialign-tx [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ discosnp [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ disulfinder [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ dnaclust [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ dssp [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ embassy-domainatrix [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ embassy-domalign [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ embassy-domsearch [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ emboss [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ exonerate [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ fastdnaml [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ fastlink [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
fastqc,
- fasttree,
- fastx-toolkit,
- filo,
- fitgcp,
- flexbar,
- freecontact,
- gasic,
- genometools,
- giira,
+ fasttree [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ fastx-toolkit [!s390 !hurd-i386 !kfreebsd-amd64 !powerpc !sparc !ia64 !kfreebsd-i386],
+ filo [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ flexbar [!s390 !hurd-i386 !kfreebsd-amd64 !s390x !sparc !armel !ia64 !mips !kfreebsd-i386 !mipsel],
+ freecontact [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ genometools [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ gff2aplot [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ gff2ps,
+ giira [!s390 !hurd-i386 !kfreebsd-amd64 !s390x !powerpc !ppc64el !sparc !armel !armhf !arm64 !ia64 !mips !kfreebsd-i386 !mipsel !i386],
+ glam2 [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
grinder,
- idba,
- infernal,
- kissplice,
- last-align,
- loki,
- macs,
- mapsembler2,
- maq,
- melting,
- minia,
+ gromacs [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ hhsuite [!s390 !hurd-i386 !kfreebsd-amd64 !s390x !powerpc !ppc64el !sparc !armel !armhf !arm64 !ia64 !mips !kfreebsd-i386 !mipsel !i386],
+ hmmer [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ idba [!s390 !hurd-i386 !kfreebsd-amd64 !powerpc !sparc !ia64 !kfreebsd-i386],
+ infernal [!s390 !hurd-i386 !kfreebsd-amd64 !s390x !powerpc !ppc64el !sparc !armel !armhf !ia64 !mips !kfreebsd-i386 !mipsel !arm64],
+ jellyfish [!s390 !hurd-i386 !kfreebsd-amd64 !s390x !powerpc !ppc64el !sparc !armel !armhf !arm64 !ia64 !mips !kfreebsd-i386 !mipsel !i386],
+ kalign [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ kissplice [!s390 !hurd-i386 !kfreebsd-amd64 !s390x !powerpc !sparc !armel !armhf !ia64 !mips !kfreebsd-i386 !mipsel !i386],
+ last-align [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ loki [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ macs [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ mafft [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ mapsembler2 [!s390 !hurd-i386 !kfreebsd-amd64 !powerpc !sparc !ia64 !mips !kfreebsd-i386 !mipsel],
+ maq [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ melting [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ minia [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
mipe,
- mira-assembler,
- mothur,
- ncbi-epcr,
- ncbi-tools-bin,
- ncoils,
- parsinsert,
- perm,
- phyml,
- phyutility,
+ mira-assembler [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ mlv-smile [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ mothur [!s390 !hurd-i386 !kfreebsd-amd64 !s390x !sparc !ia64 !kfreebsd-i386],
+ mrbayes [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ mummer [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ muscle [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ mustang [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ ncbi-epcr [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ ncbi-tools-bin [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ ncoils [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ neobio,
+ paraclu [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ parsinsert [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ pdb2pqr [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ perm [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ phyml [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ phyutility [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
picard-tools,
- plink,
- primer3,
- python-cogent,
- rnahybrid,
+ plink [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ poa [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ prank [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ prime-phylo [!s390 !hurd-i386 !kfreebsd-amd64 !s390x !sparc !ia64 !kfreebsd-i386],
+ primer3 [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ probabel [!s390 !hurd-i386 !kfreebsd-amd64 !s390x !powerpc !sparc !ia64 !mips !kfreebsd-i386],
+ probcons [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ proda [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ prodigal [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !armhf !ia64 !kfreebsd-i386],
+ pynast,
+ python-biopython [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ python-cogent [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ python3-biopython [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ qiime [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ r-bioc-edger [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ r-bioc-hilbertvis [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ r-cran-pvclust,
+ r-cran-qtl [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ r-cran-vegan [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ r-other-mott-happy.hbrem [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ raster3d [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ readseq [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ rnahybrid [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
rtax,
- samtools,
- smalt,
+ samtools [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !armel !ia64 !kfreebsd-i386],
+ seqan-apps [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !armel !ia64 !kfreebsd-i386],
+ sibsim4 [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ sigma-align [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ sim4 [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ smalt [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ snap [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ soapdenovo [!s390 !hurd-i386 !kfreebsd-amd64 !s390x !powerpc !ppc64el !sparc !armel !armhf !arm64 !ia64 !mips !kfreebsd-i386 !mipsel !i386],
+ soapdenovo2 [!s390 !hurd-i386 !kfreebsd-amd64 !s390x !powerpc !ppc64el !sparc !armel !armhf !arm64 !ia64 !mips !kfreebsd-i386 !mipsel !i386],
+ squizz [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ sra-toolkit [!s390 !hurd-i386 !kfreebsd-amd64 !s390x !powerpc !ppc64el !sparc !armel !armhf !ia64 !mips !kfreebsd-i386 !mipsel !arm64],
ssake,
- tophat,
- velvet
+ staden-io-lib-utils [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ t-coffee [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ tabix [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ theseus [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ tigr-glimmer [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ tophat [!s390 !hurd-i386 !kfreebsd-amd64 !s390x !powerpc !ppc64el !sparc !armel !armhf !arm64 !ia64 !mips !kfreebsd-i386 !mipsel !i386],
+ tree-puzzle [!s390 !hurd-i386 !kfreebsd-amd64 !s390x !sparc !arm64 !ia64 !kfreebsd-i386] | tree-ppuzzle [!s390 !hurd-i386 !kfreebsd-amd64 !s390x !sparc !arm64 !ia64 !kfreebsd-i386],
+ vcftools [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ velvet [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ wise [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ zalign [!s390 !hurd-i386 !kfreebsd-amd64 !s390x !sparc !ia64 !kfreebsd-i386]
Suggests: abyss,
bagpipe,
- cufflinks
+ cufflinks,
+ embassy-phylip,
+ fitgcp,
+ gasic,
+ gmap,
+ r-other-valdar-bagphenotype.library
Description: Debian Med bioinformatics applications usable in cloud computing
This metapackage will install Debian packages related to molecular biology,
structural biology and bioinformatics for use in life sciences, that do not
@@ -731,46 +734,47 @@ Description: Debian Med bioinformatics applications usable in cloud computing
in cloud computing clusters, where space can be limited.
Package: med-data
-Section: metapackages
-Architecture: all
+Architecture: any
+Section: metapackage
+Priority: extra
Depends: med-tasks (= ${binary:Version}), med-config (= ${binary:Version})
-Recommends: freediams,
+Recommends: freediams [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
freemedforms-freedata,
python-hl7
-Suggests: drugref.org
Description: Debian Med drug databases
This metapackage will install free drug databases and related
applications. The database can be accessed by any EMR using
the application.
Package: med-dental
-Section: metapackages
-Architecture: all
+Architecture: any
+Section: metapackage
+Priority: extra
Depends: med-tasks (= ${binary:Version}), med-config (= ${binary:Version})
-Recommends: entangle,
- imagetooth,
+Recommends: imagetooth,
openmolar
+Suggests: entangle
Description: Debian Med packages related to dental practice
This metapackage contains dependencies for a collection of software
which might be helpful for dentists to manage their practice.
Package: med-epi
-Section: metapackages
-Architecture: all
+Architecture: any
+Section: metapackage
+Priority: extra
Depends: med-tasks (= ${binary:Version}), med-config (= ${binary:Version})
Recommends: epigrass,
r-cran-diagnosismed,
- r-cran-epi,
- r-cran-epibasix,
+ r-cran-epi [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ r-cran-epibasix [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
r-cran-epicalc,
r-cran-epir,
r-cran-epitools,
- r-cran-seroincidence,
- r-cran-surveillance
+ r-cran-surveillance [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386]
Suggests: netepi-analysis,
netepi-collection,
r-cran-msm,
- repast,
+ r-cran-seroincidence,
ushahidi
Description: Debian Med epidemiology related packages
This metapackage will install tools that are useful in epidemiological
@@ -780,21 +784,16 @@ Description: Debian Med epidemiology related packages
http://staff.pubhealth.ku.dk/%7Ebxc/Epi/R-intro.pdf
Package: med-his
-Section: metapackages
-Architecture: all
+Architecture: any
+Section: metapackage
+Priority: extra
Depends: med-tasks (= ${binary:Version}), med-config (= ${binary:Version})
Recommends: fis-gtm
Suggests: care2x,
ewd-920,
- hkma-cms,
- ipath,
- openeyes,
openmrs,
- oscar-mcmaster,
- patientos,
tryton-modules-health,
- vista-foia,
- world-vista
+ vista-foia
Description: Debian Med suggestions for Hospital Information Systems
This metapackage contains dependencies for software and that could
be useful ro run a Hospital Information System. While there is
@@ -803,48 +802,43 @@ Description: Debian Med suggestions for Hospital Information Systems
anyway.
Package: med-imaging
-Section: metapackages
-Architecture: all
+Architecture: any
+Section: metapackage
+Priority: extra
Depends: med-tasks (= ${binary:Version}), med-config (= ${binary:Version})
-Recommends: aeskulap,
- amide,
- ants,
- biosig-tools,
- camitk-imp,
- caret,
- conquest-common,
- ctn,
- ctsim,
- dcmtk,
- dicom3tools,
- dicomnifti,
+Recommends: aeskulap [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ amide [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ biosig-tools [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ caret [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ conquest-common [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ ctn [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ ctsim [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ dcmtk [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ dicom3tools [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ dicomnifti [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
dicomscope,
- fslview,
- gdf-tools,
- ginkgocadx,
- gofigure2,
- gwyddion,
+ fslview [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ gdf-tools [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ gwyddion [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
imagej,
- imagevis3d,
+ imagevis3d [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
invesalius,
- ismrmrd-tools,
- itksnap,
king,
- libgdcm-tools,
- medcon,
- mia-tools,
- mia-viewit,
- mialmpick,
- minc-tools,
- mriconvert,
- mricron,
- mrtrix,
- nifti-bin,
- odin,
- openslide-tools,
- orthanc,
+ libgdcm-tools [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ medcon [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ mia-tools [!s390 !hurd-i386 !kfreebsd-amd64 !s390x !sparc !armel !ia64 !mips !kfreebsd-i386 !mipsel],
+ mia-viewit [!s390 !hurd-i386 !kfreebsd-amd64 !s390x !sparc !armel !ia64 !mips !kfreebsd-i386 !mipsel],
+ mialmpick [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ minc-tools [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ mriconvert [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ mricron [!s390 !hurd-i386 !kfreebsd-amd64 !s390x !ppc64el !sparc !arm64 !ia64 !mips !kfreebsd-i386 !mipsel],
+ mrtrix [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ nifti-bin [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ odin [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ openslide-tools [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ orthanc [!s390 !hurd-i386 !kfreebsd-amd64 !s390x !sparc !ia64 !kfreebsd-i386],
pixelmed-apps,
- plastimatch,
+ plastimatch [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
python-dicom,
python-dipy,
python-mvpa2,
@@ -853,18 +847,17 @@ Recommends: aeskulap,
python-nipype,
python-nitime,
python-surfer,
- sigviewer,
- sofa-apps,
- teem-apps,
- voxbo,
- vtk-dicom-tools,
- xmedcon
+ sigviewer [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ sofa-apps [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ teem-apps [!s390 !hurd-i386 !kfreebsd-amd64 !ppc64el !sparc !arm64 !ia64 !kfreebsd-i386],
+ voxbo [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ vtk-dicom-tools [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ xmedcon [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386]
Suggests: afni,
+ ants,
bioimagesuite,
bioimagexd,
- blox,
- brainvisa,
- cdmedicpacs,
+ camitk-imp,
cellprofiler,
cmtk,
connectomeviewer,
@@ -873,66 +866,35 @@ Suggests: afni,
conquest-postgres,
conquest-sqlite,
crea,
- dcm4chee,
- devide,
- dicom4j,
dicoogle,
- drjekyll,
- dti-query,
- dtitk,
- ecg2png,
- eeglab,
elastix,
- fiji,
- freesurfer,
fsl,
- gimias,
- hid,
+ ginkgocadx,
+ gofigure2,
imagemagick,
imview,
- incf-nidash-oneclick-clients,
insightapplications,
- isis,
- jemris,
+ ismrmrd-tools,
+ itksnap,
jist,
kradview,
libdcm4che-java,
- lipsia,
- maris,
mayam,
- medisnap,
- mesa-test-tools,
micromanager,
mipav,
- miview,
- mni-autoreg,
mni-colin27-nifti,
- mni-icbm152-nlin-2009,
- mni-n3,
- mrisim,
- omero,
- opendicom.net,
openelectrophy,
openmeeg-tools,
- opensourcepacs,
openwalnut-qt4,
orthanc-webviewer,
paraview,
- piano,
pngquant,
- pymeg,
python-pyxid,
- slicer,
- stabilitycalc,
- stir,
- tempo,
tifffile,
trimage,
via-bin,
- visit,
vmtk,
- volview,
- xnat
+ volview
Description: Debian Med imaging packages
This metapackage will install Debian packages which might be useful in
medical image processing.
@@ -953,44 +915,46 @@ Description: Debian Med imaging packages
ftp://medical.nema.org/medical/dicom/2008/ .
Package: med-imaging-dev
-Section: metapackages
-Architecture: all
+Architecture: any
+Section: metapackage
+Priority: extra
Depends: med-tasks (= ${binary:Version}), med-config (= ${binary:Version})
Recommends: cimg-dev,
- ctn-dev,
- gmic,
- libactiviz.net-cil,
- libbiosig-dev,
- libcamitk3-dev,
- libcv-dev,
- libedf-dev,
- libgdcm2-dev,
- libgdf-dev,
- libgiftiio-dev,
- libinsighttoolkit3-dev | libinsighttoolkit4-dev,
- libismrmrd-dev,
- libmdc2-dev,
- libmia-2.2-dev,
- libmialm-dev,
- libmiaviewit-dev,
- libminc-dev,
- libnifti-dev,
- libopenslide-dev,
- libpapyrus3-dev,
- libteem-dev,
- libvigraimpex-dev,
- libvistaio-dev,
- libvolpack1-dev,
- libvtk5-dev,
- libvxl1-dev,
- octave-gdf,
- odin,
- python-casmoothing,
+ ctn-dev [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ gmic [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ libactiviz.net-cil [!s390 !hurd-i386 !kfreebsd-amd64 !ppc64el !sparc !arm64 !ia64 !mips !kfreebsd-i386],
+ libbiosig-dev [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ libcv-dev [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ libedf-dev [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ libgdf-dev [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ libgiftiio-dev [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ libinsighttoolkit3-dev [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386] | libinsighttoolkit4-dev [!s390 !hurd-i386 !kfreebsd-amd64 !s390x !powerpc !ppc64el !sparc !armel !armhf !ia64 !mips !kfreebsd-i386 !mipsel !arm64],
+ libismrmrd-dev [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ libmaxflow-dev [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ libmdc2-dev [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ libmia-2.2-dev [!s390 !hurd-i386 !kfreebsd-amd64 !s390x !sparc !armel !ia64 !mips !kfreebsd-i386 !mipsel],
+ libmialm-dev [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ libmiaviewit-dev [!s390 !hurd-i386 !kfreebsd-amd64 !s390x !sparc !armel !ia64 !mips !kfreebsd-i386 !mipsel],
+ libminc-dev [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ libnifti-dev [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ libopenslide-dev [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ libpapyrus3-dev [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ libteem-dev [!s390 !hurd-i386 !kfreebsd-amd64 !ppc64el !sparc !arm64 !ia64 !kfreebsd-i386],
+ libvigraimpex-dev [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ libvistaio-dev [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ libvolpack1-dev [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ libvtk-dicom-java [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ libvtk-dicom0.5-dev [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ libvtk5-dev [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ libvxl1-dev [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ octave-gdf [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ odin [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ python-casmoothing [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
python-cfflib,
python-dicom,
python-dipy,
- python-gdcm,
- python-mia | python3-mia,
+ python-gdcm [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ python-mia [!s390 !hurd-i386 !kfreebsd-amd64 !s390x !sparc !armel !ia64 !mips !kfreebsd-i386 !mipsel] | python3-mia [!s390 !hurd-i386 !kfreebsd-amd64 !s390x !sparc !armel !ia64 !mips !kfreebsd-i386 !mipsel],
python-mne,
python-mvpa2,
python-nibabel,
@@ -999,17 +963,17 @@ Recommends: cimg-dev,
python-nitime,
python-openslide,
python-pyxnat,
- python-vigra,
- r-cran-rniftilib
-Suggests: emokit,
- igstk-examples,
+ python-vigra [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ r-cran-rniftilib [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386]
+Suggests: igstk-examples,
insighttoolkit3-examples,
libbio-formats-java,
+ libcamitk3-dev,
libctk-dev,
libeegdev-dev,
libics-dev,
libigstk4-dev,
- libmni-perllib-perl,
+ liblimereg-dev,
libnifti-doc,
libopenigtlink1-dev,
libopenmeeg-dev,
@@ -1017,12 +981,9 @@ Suggests: emokit,
libopensurgsim-dev,
libvia-dev,
libvmtk-dev,
- libvtk-dicom0.4-dev,
libvtk5.4,
libvtkedge-dev,
libxdffileio-dev,
- limereg-dev,
- octave-dicom,
python-imageio,
python-libavg,
python-tifffile,
@@ -1032,54 +993,52 @@ Description: Debian Med packages for medical image development
for developing applications for medical image processing.
Package: med-laboratory
-Section: metapackages
-Architecture: all
+Architecture: any
+Section: metapackage
+Priority: extra
Depends: med-tasks (= ${binary:Version}), med-config (= ${binary:Version})
-Recommends: opencfu
-Suggests: catissuesuite,
- openelis,
- openfreezer
+Recommends: opencfu [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386]
Description: Debian Med suggestions for medical laboratories
This metapackage contains dependencies for software and that could
be useful ro run a medical laboratory.
Package: med-oncology
-Section: metapackages
-Architecture: all
+Architecture: any
+Section: metapackage
+Priority: extra
Depends: med-tasks (= ${binary:Version}), med-config (= ${binary:Version})
Recommends: dicompyler
-Suggests: planunc,
- uw-prism
+Suggests: uw-prism
Description: Debian Med packages for oncology
This metapackage will install tools that are useful for radiation
oncology.
Package: med-pharmacy
-Section: metapackages
-Architecture: all
+Architecture: any
+Section: metapackage
+Priority: extra
Depends: med-tasks (= ${binary:Version}), med-config (= ${binary:Version})
-Recommends: chemtool,
- r-cran-dosefinding
-Suggests: raccoon
+Recommends: chemtool [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386]
+Suggests: r-cran-dosefinding,
+ raccoon
Description: Debian Med packages for pharmaceutical research
This metapackage contains dependencies for a
collection of software and documentation which is useful for
pharmaceutical research.
Package: med-physics
-Section: metapackages
-Architecture: all
+Architecture: any
+Section: metapackage
+Priority: extra
Depends: med-tasks (= ${binary:Version}), med-config (= ${binary:Version})
-Recommends: biosig-tools,
- gdf-tools,
- octave,
- paw,
- paw++,
+Recommends: biosig-tools [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ gdf-tools [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ octave [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ paw [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !arm64 !ia64 !kfreebsd-i386],
+ paw++ [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !arm64 !ia64 !kfreebsd-i386],
r-base
-Suggests: gate,
- libbiosig-dev,
+Suggests: libbiosig-dev,
octave-biosig,
- openvibe,
paw-demos,
python-biosig,
python-multipletau
@@ -1090,58 +1049,39 @@ Description: Debian Med packages for medical physicists
and related fields.
Package: med-practice
-Section: metapackages
-Architecture: all
+Architecture: any
+Section: metapackage
+Priority: extra
Depends: med-tasks (= ${binary:Version}), med-config (= ${binary:Version})
-Recommends: entangle,
- freediams,
- freemedforms-emr,
- ginkgocadx,
+Recommends: freediams [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ freemedforms-emr [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
gnumed-client,
gnumed-server,
- libchipcard-tools,
- qrisk2,
- r-cran-medadherence
-Suggests: clearhealth,
- clinica,
- elementalclinic,
- elexis,
- freeb,
- freemed,
- freeshim,
+ libchipcard-tools [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ qrisk2 [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ r-cran-medadherence [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386]
+Suggests: clinica,
+ entangle,
+ ginkgocadx,
libctapimkt1,
- medintux,
- mirrormed,
- mirth,
openemr,
- openpms,
- openrep,
- proteus,
- remitt,
- resmedicinae,
- sqlclinic,
- thera-pi,
- tinyheb
+ thera-pi
Description: Debian Med packages for practice management
This metapackage contains dependencies for a collection of software
which might be helpful for practitioners to manage their practice.
Package: med-psychology
-Section: metapackages
-Architecture: all
+Architecture: any
+Section: metapackage
+Priority: extra
Depends: med-tasks (= ${binary:Version}), med-config (= ${binary:Version})
-Recommends: praat,
- psignifit,
+Recommends: praat [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ psignifit [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
psychopy,
- python-pyepl,
- r-cran-foreign,
+ python-pyepl [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ r-cran-foreign [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
r-cran-psy
-Suggests: miscpsycho,
- psych,
- psychometric,
- psychotree,
- psyphy,
- python-pypsignifit,
+Suggests: python-pypsignifit,
python-visionegg,
science-psychophysics
Description: Debian Med packages for psychology
@@ -1149,59 +1089,62 @@ Description: Debian Med packages for psychology
which might be helpful for psychological research.
Package: med-rehabilitation
-Section: metapackages
-Architecture: all
+Architecture: any
+Section: metapackage
+Priority: extra
Depends: med-tasks (= ${binary:Version}), med-config (= ${binary:Version})
-Recommends: sitplus
+Recommends: sitplus [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386]
Suggests: aghermann
Description: Debian Med packages for rehabilitation technologies
This metapackage will install tools that are useful for
rehabilitation and therapy.
Package: med-statistics
-Section: metapackages
-Architecture: all
+Architecture: any
+Section: metapackage
+Priority: extra
Depends: med-tasks (= ${binary:Version}), med-config (= ${binary:Version})
-Recommends: r-bioc-edger,
- r-bioc-limma,
+Recommends: r-bioc-edger [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
+ r-bioc-limma [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
r-bioc-qvalue,
- r-cran-beeswarm,
r-cran-pvclust,
- r-cran-randomforest
-Suggests: science-statistics
+ r-cran-randomforest [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386]
+Suggests: r-cran-beeswarm,
+ science-statistics
Description: Debian Med statistics
This metapackage will install packages which are helpful to do statistics
with a special focus on tasks in medical care.
Package: med-tools
-Section: metapackages
-Architecture: all
+Architecture: any
+Section: metapackage
+Priority: extra
Depends: med-tasks (= ${binary:Version}), med-config (= ${binary:Version})
Recommends: cronometer,
- edfbrowser,
+ edfbrowser [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
hunspell-de-med,
hunspell-en-med,
- nut-nutrition,
+ nut-nutrition [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
pcalendar,
pondus,
- python-clips,
+ python-clips [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
python-fitbit,
- quitcount,
+ quitcount [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386],
wgerman-medical,
- workrave
+ workrave [!s390 !hurd-i386 !kfreebsd-amd64 !sparc !ia64 !kfreebsd-i386]
Suggests: cycle,
entangle,
goldencheetah,
mencal,
- mssstest,
- python3-fitbitscraper
+ mssstest
Description: Debian Med several tools
This metapackage will install tools for several purposes in health care.
Currently it contains some simple programs for Personal Health.
Package: med-typesetting
-Section: metapackages
-Architecture: all
+Architecture: any
+Section: metapackage
+Priority: extra
Depends: med-tasks (= ${binary:Version}), med-config (= ${binary:Version})
Recommends: king,
texlive-latex-extra,
--
Debian Med metapackages
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