[Blends-commit] [Git][blends-team/med][master] Drop additional information from packages that are available now

[Andreas Tille]

Andreas Tille pushed to branch master at Debian Blends Team / med


Commits:
ed2b5628 by Andreas Tille at 2019-02-04T15:05:59Z
Drop additional information from packages that are available now

- - - - -


1 changed file:

- tasks/bio


Changes:

=====================================
tasks/bio
=====================================
@@ -1912,37 +1912,8 @@ Pkg-Description: processes, clusters and annotates EST data
 Remark: This package ships with BioLinux http://envgen.nox.ac.uk/biolinux.html
 
 Recommends: lamarc
-Homepage: http://evolution.genetics.washington.edu/lamarc/index.html
-Pkg-URL: http://nebc.nox.ac.uk/bio-linux/dists/unstable/bio-linux/binary-i386/
-Remark: This package ships with BioLinux http://envgen.nox.ac.uk/biolinux.html.
- In 1/2018 upstream has apparently updated their tarball to help the
- redistribution of their software. Someone please go for it.
 
 Recommends: lucy
-Homepage: http://lucy.sourceforge.net/
-License: GPL
-Responsible: BioLinux - Dan Swan <dswan at ceh.ac.uk>
-Pkg-URL: http://nebc.nox.ac.uk/bio-linux/dists/unstable/bio-linux/binary-i386/
-Pkg-Description: DNA sequence quality and vector trimming tool
- Lucy is a utility that prepares raw DNA sequence fragments for
- sequence assembly, possibly using the TIGR Assembler. The cleanup
- process includes quality assessment, confidence reassurance, vector
- trimming and vector removal. The primary advantage of Lucy over other
- similar utilities is that it is a fully integrated, stand alone
- program.
- .
- Lucy was designed and written at The Institute for Genomic Research
- (TIGR, now the J. Craig Venter Institute), and it has been used here
- for several years to clean sequence data from automated DNA
- sequencers prior to sequence assembly and other downstream uses.  The
- quality trimming portion of lucy makes use of phred quality scores,
- such as those produced by many automated sequencers based on the
- Sanger sequencing method.  As such, lucy’s quality trimming may not
- be appropriate for sequence data produced by some of the new
- “next-generation” sequencers.
- .
- See also the SourceForge page at http://lucy.sourceforge.net/.
-Remark: This package ships with BioLinux http://envgen.nox.ac.uk/biolinux.html
 
 Recommends: maxd
 Homepage: http://www.bioinf.man.ac.uk/microarray/maxd/



View it on GitLab: https://salsa.debian.org/blends-team/med/commit/ed2b5628045bf385fdf5bcd93508929650a98696

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