[Blends-commit] [Git][blends-team/med][master] blast is actually ncbi-blast+

[Andreas Tille]

Andreas Tille pushed to branch master at Debian Blends Team / med


Commits:
5c05edc9 by Andreas Tille at 2020-05-11T22:00:16+02:00
blast is actually ncbi-blast+

- - - - -


3 changed files:

- covid-19_doc/bio_covid-19_dependencies
- covid-19_doc/bio_covid-19_dependencies_query
- covid-19_doc/bio_covid-19_dependencies_result


Changes:

=====================================
covid-19_doc/bio_covid-19_dependencies
=====================================
@@ -13,7 +13,7 @@ ascat
 bcftools
 bedtools
 biopython
-blast
+ncbi-blast+
 bowtie2
 busco
 bustools


=====================================
covid-19_doc/bio_covid-19_dependencies_query
=====================================
@@ -81,7 +81,7 @@ SELECT package, string_agg(architecture, ',') as architectures FROM (
 'bcftools',
 'bedtools',
 'biopython',
-'blast',
+'ncbi-blast+',
 'bowtie2',
 'busco',
 'bustools',


=====================================
covid-19_doc/bio_covid-19_dependencies_result
=====================================
@@ -1,11 +1,10 @@
-Last-Update: Mon, 11 May 2020 21:48:13 +0200
+Last-Update: Mon, 11 May 2020 21:59:45 +0200
 
            package           |      architectures      
 -----------------------------+-------------------------
  abacas                      | all
  bcftools                    | amd64,arm64,ppc64el
  bedtools                    | amd64,arm64,ppc64el
- blast                       | amd64
  bowtie2                     | amd64,arm64,ppc64el
  bustools                    | amd64
  bwa                         | amd64,arm64,ppc64el
@@ -22,6 +21,7 @@ Last-Update: Mon, 11 May 2020 21:48:13 +0200
  minimap2                    | amd64,arm64,ppc64el
  multiqc                     | all
  muscle                      | amd64,arm64,ppc64el
+ ncbi-blast+                 | amd64,arm64,ppc64el
  picard                      | amd64,arm64,ppc64el
  porechop                    | amd64,arm64,ppc64el
  prodigal                    | amd64,arm64,ppc64el



View it on GitLab: https://salsa.debian.org/blends-team/med/-/commit/5c05edc9953f2dfb1ff543e8833ddf76516320b1

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View it on GitLab: https://salsa.debian.org/blends-team/med/-/commit/5c05edc9953f2dfb1ff543e8833ddf76516320b1
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