[Blends-commit] [Git][blends-team/med][master] Recommends: samclip

[Andreas Tille]

Andreas Tille pushed to branch master at Debian Blends Team / med


Commits:
f449e24f by Andreas Tille at 2020-05-27T13:52:13+02:00
Recommends: samclip

- - - - -


3 changed files:

- covid-19_doc/bio_covid-19_dependencies_query
- tasks/bio
- tasks/covid-19


Changes:

=====================================
covid-19_doc/bio_covid-19_dependencies_query
=====================================
@@ -136,11 +136,11 @@ INSERT INTO covid19_packages VALUES
 ('qualimap'),
 ('quast'),
 ('r-cran-alakazam'),
-('r-cran-ggplot2'),
-('r-cran-rmarkdown'),
 ('r-cran-shazam'),
 ('r-cran-tigger'),
 /*
+('r-cran-ggplot2'),
+('r-cran-rmarkdown'),
 ('r-cran-locfit'),
 ('r-bioc-deseq2'),
 ('r-bioc-tximport'),


=====================================
tasks/bio
=====================================
@@ -1147,6 +1147,8 @@ Recommends: samblaster
 
 Recommends: salmon
 
+Recommends: samclip
+
 Recommends: sap
 Remark: Precondition for T-Coffee
  see http://wiki.debian.org/DebianMed/TCoffee


=====================================
tasks/covid-19
=====================================
@@ -212,6 +212,8 @@ Recommends: flash
 
 Recommends: lumpy-sv
 
+Recommends: samclip
+
 X-Comment: </Jun_Aruga>
 
 X-Comment:  TODO: Check out



View it on GitLab: https://salsa.debian.org/blends-team/med/-/commit/f449e24fe8add6cd61cef1ed0faf9457a46b968a

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