[med-svn] r2063 - trunk/packages/pdb2pqr/trunk/debian

[smoe-guest at alioth.debian.org]

Author: smoe-guest
Date: 2008-06-15 19:20:42 +0000 (Sun, 15 Jun 2008)
New Revision: 2063

Modified:
   trunk/packages/pdb2pqr/trunk/debian/README.Debian
   trunk/packages/pdb2pqr/trunk/debian/propka.1.xml
   trunk/packages/pdb2pqr/trunk/debian/psize.1.xml
Log:
Smallish improvements (so I hope) to the man pages.
The README should not see my otherwise correct Umlaut (it never works for me
whenever I change my terminal and certainly does not work for others either).


Modified: trunk/packages/pdb2pqr/trunk/debian/README.Debian
===================================================================
--- trunk/packages/pdb2pqr/trunk/debian/README.Debian	2008-06-15 19:05:19 UTC (rev 2062)
+++ trunk/packages/pdb2pqr/trunk/debian/README.Debian	2008-06-15 19:20:42 UTC (rev 2063)
@@ -12,4 +12,4 @@
 The Debian package of PDB2PQR currently does not provide the parts that are
 necessary to run PDB2PQR as a web service.
 
- -- Steffen Möller and Manuel Prinz  Thu, 12 Jun 2008 15:18:01 +0200
+ -- Steffen Moeller and Manuel Prinz  Thu, 12 Jun 2008 15:18:01 +0200

Modified: trunk/packages/pdb2pqr/trunk/debian/propka.1.xml
===================================================================
--- trunk/packages/pdb2pqr/trunk/debian/propka.1.xml	2008-06-15 19:05:19 UTC (rev 2062)
+++ trunk/packages/pdb2pqr/trunk/debian/propka.1.xml	2008-06-15 19:20:42 UTC (rev 2063)
@@ -34,7 +34,7 @@
   <refsect1 id="description">
     <title>DESCRIPTION</title>
     <para>
-      &propka; is a able to protonate a structure in <acronym>PDB</acronym> format to a given pKa value. The file to use has to be named <filename>PROPKATMP1</filename> in the directory where propka is run.</para>
+      &propka; automates the protonation (positioning of hydrogen ions) to a structure in <acronym>PDB</acronym> format for any given pKa value. The file to use has to be named <filename>PROPKATMP1</filename> in the directory where propka is run.</para>
       <para>&propka; will generate two output files named <filename>PROPKATMP2</filename> and <filename>PROPKATMP3</filename>. <filename>PROPKATMP2</filename> contains the resulting structure in <acronym>PDB</acronym> format. <filename>PROPKATMP3</filename> contains a summary of the &propka; run.</para>
   </refsect1>
   <refsect1 id="citing">

Modified: trunk/packages/pdb2pqr/trunk/debian/psize.1.xml
===================================================================
--- trunk/packages/pdb2pqr/trunk/debian/psize.1.xml	2008-06-15 19:05:19 UTC (rev 2062)
+++ trunk/packages/pdb2pqr/trunk/debian/psize.1.xml	2008-06-15 19:20:42 UTC (rev 2063)
@@ -48,7 +48,7 @@
   <refsect1 id="description">
     <title>DESCRIPTION</title>
     <para>
-      &psize; is able to calculate dimensions and other information from <acronym>PQR</acronym> files. This information can be used to perform electrostatics calculations. It includes dimensions for coarse and fine grids, grid spacings, box size and an estimation of the memory required to perform an electrostatics calculation.</para>
+      &psize; derives information from <acronym>PQR</acronym> files to preprare the models of proteins and chemicals for electrostatics calculations. The tool calculates dimensions for coarse and fine grids, grid spacings, box size and estimates the memory required to perform an electrostatics calculation.</para>
       <para>The calculation of this information can be influenced by giving contraints to &psize; as parameters.</para>
   </refsect1>
   <refsect1 id="options">