[med-svn] r1566 - in trunk/packages: . dazzle dazzle/trunk dazzle/trunk/debian
tille at alioth.debian.org
tille at alioth.debian.org
Thu Mar 13 08:13:08 UTC 2008
Author: tille
Date: 2008-03-13 08:13:08 +0000 (Thu, 13 Mar 2008)
New Revision: 1566
Added:
trunk/packages/dazzle/
trunk/packages/dazzle/trunk/
trunk/packages/dazzle/trunk/README
trunk/packages/dazzle/trunk/debian/
trunk/packages/dazzle/trunk/debian/README.Debian
trunk/packages/dazzle/trunk/debian/changelog
trunk/packages/dazzle/trunk/debian/compat
trunk/packages/dazzle/trunk/debian/control
trunk/packages/dazzle/trunk/debian/copyright
trunk/packages/dazzle/trunk/debian/dirs
trunk/packages/dazzle/trunk/debian/docs
trunk/packages/dazzle/trunk/debian/rules
trunk/packages/dazzle/trunk/debian/watch
Log:
Moved Steffen M?\195?\182llers work on dazzle which was stalled to svn to keep track of previous work.
Added: trunk/packages/dazzle/trunk/README
===================================================================
--- trunk/packages/dazzle/trunk/README (rev 0)
+++ trunk/packages/dazzle/trunk/README 2008-03-13 08:13:08 UTC (rev 1566)
@@ -0,0 +1,3 @@
+Work on this project was started by Steffen Möller but has stalled.
+Feel free to take it over.
+
Added: trunk/packages/dazzle/trunk/debian/README.Debian
===================================================================
--- trunk/packages/dazzle/trunk/debian/README.Debian (rev 0)
+++ trunk/packages/dazzle/trunk/debian/README.Debian 2008-03-13 08:13:08 UTC (rev 1566)
@@ -0,0 +1,23 @@
+dazzle for Debian
+-----------------
+
+This is only a very preliminary release.
+
+To get the upstream example into Tomcat4, please do
+
+ cd /usr/share/doc/dazzle/dazzle-webapp
+ sudo /etc/init.d/tomcat4 stop
+ sudo jar cf /var/lib/tomcat4/webapps/das.war .
+ sudo /etc/init.d/tomcat4 start
+
+The server's welcome page should then be visible at
+http://localhost:8180/das/
+not at 8080 as hinted in the upstream docs.
+
+Any hints on how to improve packaging are welcome.
+
+Cheers,
+
+Steffen
+
+ -- Steffen Moeller <moeller at pzr.uni-rostock.de>, Mon, 24 Jan 2005 00:48:09 +0100
Added: trunk/packages/dazzle/trunk/debian/changelog
===================================================================
--- trunk/packages/dazzle/trunk/debian/changelog (rev 0)
+++ trunk/packages/dazzle/trunk/debian/changelog 2008-03-13 08:13:08 UTC (rev 1566)
@@ -0,0 +1,6 @@
+dazzle (1.01-1) unstable; urgency=low
+
+ * Initial Release.
+
+ -- Steffen Moeller <moeller at pzr.uni-rostock.de> Mon, 24 Jan 2005 00:48:09 +0100
+
Added: trunk/packages/dazzle/trunk/debian/compat
===================================================================
--- trunk/packages/dazzle/trunk/debian/compat (rev 0)
+++ trunk/packages/dazzle/trunk/debian/compat 2008-03-13 08:13:08 UTC (rev 1566)
@@ -0,0 +1 @@
+4
Added: trunk/packages/dazzle/trunk/debian/control
===================================================================
--- trunk/packages/dazzle/trunk/debian/control (rev 0)
+++ trunk/packages/dazzle/trunk/debian/control 2008-03-13 08:13:08 UTC (rev 1566)
@@ -0,0 +1,21 @@
+Source: dazzle
+Section: science
+Priority: optional
+Maintainer: Steffen Moeller <moeller at pzr.uni-rostock.de>
+Build-Depends: debhelper (>= 4.0.0), ant, sun-j2sdk1.4|java2-compiler, libbiojava-java (>=1.4)
+Standards-Version: 3.6.1.1
+
+Package: dazzle
+Architecture: all
+Depends: ${shlibs:Depends}, ${misc:Depends}, sun-j2sdk1.4|java2-runtime, libbiojava-java (>=1.4)
+Description: [Biology] Java-based DAS server
+ Dazzle is a general purpose server for the Distributed Annotation System
+ (DAS) protocol. It is implemented as a Java servlet, using the BioJava
+ APIs. Dazzle is a modular system which uses small "datasource" plugins to
+ provide access to a range of databases. Several general-purpose plugins
+ are included in the package, and it it straightforward to develop new
+ plugins to connect to your own databases.
+ .
+ Information on DAS is available from http://www.biodas.org/
+ .
+ Homepage: http://www.biojava.org/dazzle
Added: trunk/packages/dazzle/trunk/debian/copyright
===================================================================
--- trunk/packages/dazzle/trunk/debian/copyright (rev 0)
+++ trunk/packages/dazzle/trunk/debian/copyright 2008-03-13 08:13:08 UTC (rev 1566)
@@ -0,0 +1,28 @@
+This package was debianized by Steffen Moeller <moeller at pzr.uni-rostock.de> on
+Mon, 24 Jan 2005 00:48:09 +0100.
+
+It was downloaded from http://www.biojava.org/download/dazzle/dazzle-1.01.tar.gz
+
+Copyright:
+
+Upstream Author: Thomas Down <td2 at sanger.ac.uk>
+
+License:
+
+ This package is free software; you can redistribute it and/or
+ modify it under the terms of the GNU Lesser General Public
+ License as published by the Free Software Foundation; either
+ version 2 of the License, or (at your option) any later version.
+
+ This package is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+ Lesser General Public License for more details.
+
+ You should have received a copy of the GNU Lesser General Public
+ License along with this package; if not, write to the Free Software
+ Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
+
+On Debian systems, the complete text of the GNU Lesser General
+Public License can be found in `/usr/share/common-licenses/LGPL'.
+
Added: trunk/packages/dazzle/trunk/debian/dirs
===================================================================
--- trunk/packages/dazzle/trunk/debian/dirs (rev 0)
+++ trunk/packages/dazzle/trunk/debian/dirs 2008-03-13 08:13:08 UTC (rev 1566)
@@ -0,0 +1,2 @@
+usr/share/java
+usr/share/doc/dazzle
Added: trunk/packages/dazzle/trunk/debian/docs
===================================================================
--- trunk/packages/dazzle/trunk/debian/docs (rev 0)
+++ trunk/packages/dazzle/trunk/debian/docs 2008-03-13 08:13:08 UTC (rev 1566)
@@ -0,0 +1 @@
+docs/*
Added: trunk/packages/dazzle/trunk/debian/rules
===================================================================
--- trunk/packages/dazzle/trunk/debian/rules (rev 0)
+++ trunk/packages/dazzle/trunk/debian/rules 2008-03-13 08:13:08 UTC (rev 1566)
@@ -0,0 +1,68 @@
+#!/usr/bin/make -f
+# -*- makefile -*-
+# Sample debian/rules that uses debhelper.
+# This file was originally written by Joey Hess and Craig Small.
+# As a special exception, when this file is copied by dh-make into a
+# dh-make output file, you may use that output file without restriction.
+# This special exception was added by Craig Small in version 0.37 of dh-make.
+
+# Uncomment this to turn on verbose mode.
+#export DH_VERBOSE=1
+
+
+build: build-stamp
+build-stamp:
+ dh_testdir
+
+ ant package-main javadocs-main
+
+ touch build-stamp
+
+clean:
+ dh_testdir
+ dh_testroot
+ rm -f build-stamp
+
+ # Add here commands to clean up after the build process.
+ ant clean
+
+ dh_clean
+
+DESTDIR=$(CURDIR)/debian/dazzle
+
+install: build
+ dh_testdir
+ dh_testroot
+ dh_clean -k
+ dh_installdirs
+
+ cp ant-build/dazzle.jar $(DESTDIR)/usr/share/java/
+ cp -r ant-build/docs/dazzle $(DESTDIR)/usr/share/doc/dazzle/api
+ cp -r dazzle-webapp $(DESTDIR)/usr/share/doc/dazzle/dazzle-webapp
+ (cd $(DESTDIR)/usr/share/doc/dazzle/dazzle-webapp/WEB-INF/lib \
+ && ln -s ../../../../../java/{biojava,bytecode,dazzle}.jar . )
+
+
+binary-arch: build install
+# Build architecture-dependent files here.
+# We have nothing to do by default.
+#
+binary-indep: build install
+# Build architecture-independent files here.
+ dh_testdir
+ dh_testroot
+ dh_installchangelogs
+ dh_installdocs
+ dh_installexamples
+ dh_installman
+ dh_link
+ dh_strip
+ dh_compress
+ dh_fixperms
+ dh_shlibdeps
+ dh_gencontrol
+ dh_md5sums
+ dh_builddeb
+
+binary: binary-indep
+.PHONY: build clean binary-indep binary-arch binary install
Added: trunk/packages/dazzle/trunk/debian/watch
===================================================================
--- trunk/packages/dazzle/trunk/debian/watch (rev 0)
+++ trunk/packages/dazzle/trunk/debian/watch 2008-03-13 08:13:08 UTC (rev 1566)
@@ -0,0 +1,6 @@
+# Example watch control file for uscan
+# Rename this file to "watch" and then you can run the "uscan" command
+# to check for upstream updates and more.
+# Site Directory Pattern Version Script
+version=2
+http://www.biojava.org/download/dazzle dazzle-(.*)\.tar\.gz debian uupdate
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