[med-svn] r5170 - in trunk/packages/ensembl: . ensembl ensembl/57 ensembl/57/debian ensembl/57/debian/source

Steffen Möller moeller at alioth.debian.org
Fri Aug 20 13:16:01 UTC 2010


Author: moeller
Date: 2010-08-20 13:15:52 +0000 (Fri, 20 Aug 2010)
New Revision: 5170

Added:
   trunk/packages/ensembl/ensembl/
   trunk/packages/ensembl/ensembl/57/
   trunk/packages/ensembl/ensembl/57/debian/
   trunk/packages/ensembl/ensembl/57/debian/README.Debian
   trunk/packages/ensembl/ensembl/57/debian/README.source
   trunk/packages/ensembl/ensembl/57/debian/changelog
   trunk/packages/ensembl/ensembl/57/debian/compat
   trunk/packages/ensembl/ensembl/57/debian/control
   trunk/packages/ensembl/ensembl/57/debian/copyright
   trunk/packages/ensembl/ensembl/57/debian/docs
   trunk/packages/ensembl/ensembl/57/debian/ensembl.cron.d.ex
   trunk/packages/ensembl/ensembl/57/debian/ensembl.debhelper.log
   trunk/packages/ensembl/ensembl/57/debian/ensembl.default.ex
   trunk/packages/ensembl/ensembl/57/debian/ensembl.dirs
   trunk/packages/ensembl/ensembl/57/debian/ensembl.doc-base.EX
   trunk/packages/ensembl/ensembl/57/debian/ensembl.substvars
   trunk/packages/ensembl/ensembl/57/debian/files
   trunk/packages/ensembl/ensembl/57/debian/init.d.ex
   trunk/packages/ensembl/ensembl/57/debian/postinst.ex
   trunk/packages/ensembl/ensembl/57/debian/postrm.ex
   trunk/packages/ensembl/ensembl/57/debian/preinst.ex
   trunk/packages/ensembl/ensembl/57/debian/prerm.ex
   trunk/packages/ensembl/ensembl/57/debian/rules
   trunk/packages/ensembl/ensembl/57/debian/source/
   trunk/packages/ensembl/ensembl/57/debian/source/format
   trunk/packages/ensembl/ensembl/57/debian/watch.ex
Log:
Initial work on an Ensembl package.


Added: trunk/packages/ensembl/ensembl/57/debian/README.Debian
===================================================================
--- trunk/packages/ensembl/ensembl/57/debian/README.Debian	                        (rev 0)
+++ trunk/packages/ensembl/ensembl/57/debian/README.Debian	2010-08-20 13:15:52 UTC (rev 5170)
@@ -0,0 +1,6 @@
+ensembl for Debian
+------------------
+
+<possible notes regarding this package - if none, delete this file>
+
+ -- Richard Holland <holland at eaglegenomics.com>  Fri, 20 Aug 2010 14:46:17 +0200

Added: trunk/packages/ensembl/ensembl/57/debian/README.source
===================================================================
--- trunk/packages/ensembl/ensembl/57/debian/README.source	                        (rev 0)
+++ trunk/packages/ensembl/ensembl/57/debian/README.source	2010-08-20 13:15:52 UTC (rev 5170)
@@ -0,0 +1,9 @@
+ensembl for Debian
+------------------
+
+<this file describes information about the source package, see Debian policy
+manual section 4.14. You WILL either need to modify or delete this file>
+
+
+
+

Added: trunk/packages/ensembl/ensembl/57/debian/changelog
===================================================================
--- trunk/packages/ensembl/ensembl/57/debian/changelog	                        (rev 0)
+++ trunk/packages/ensembl/ensembl/57/debian/changelog	2010-08-20 13:15:52 UTC (rev 5170)
@@ -0,0 +1,5 @@
+ensembl (57-1) unstable; urgency=low
+
+  * Initial release (Closes: #nnnn)  <nnnn is the bug number of your ITP>
+
+ -- Richard Holland <holland at eaglegenomics.com>  Fri, 20 Aug 2010 14:46:17 +0200

Added: trunk/packages/ensembl/ensembl/57/debian/compat
===================================================================
--- trunk/packages/ensembl/ensembl/57/debian/compat	                        (rev 0)
+++ trunk/packages/ensembl/ensembl/57/debian/compat	2010-08-20 13:15:52 UTC (rev 5170)
@@ -0,0 +1 @@
+7

Added: trunk/packages/ensembl/ensembl/57/debian/control
===================================================================
--- trunk/packages/ensembl/ensembl/57/debian/control	                        (rev 0)
+++ trunk/packages/ensembl/ensembl/57/debian/control	2010-08-20 13:15:52 UTC (rev 5170)
@@ -0,0 +1,15 @@
+Source: ensembl
+Section: unknown
+Priority: extra
+Maintainer: Richard Holland <holland at eaglegenomics.com>
+Build-Depends: debhelper (>= 7.0.50~)
+Standards-Version: 3.8.4
+Homepage: <insert the upstream URL, if relevant>
+#Vcs-Git: git://git.debian.org/collab-maint/ensembl.git
+#Vcs-Browser: http://git.debian.org/?p=collab-maint/ensembl.git;a=summary
+
+Package: ensembl
+Architecture: any
+Depends: ${shlibs:Depends}, ${misc:Depends}
+Description: <insert up to 60 chars description>
+ <insert long description, indented with spaces>

Added: trunk/packages/ensembl/ensembl/57/debian/copyright
===================================================================
--- trunk/packages/ensembl/ensembl/57/debian/copyright	                        (rev 0)
+++ trunk/packages/ensembl/ensembl/57/debian/copyright	2010-08-20 13:15:52 UTC (rev 5170)
@@ -0,0 +1,64 @@
+This work was packaged for Debian by:
+
+    Richard Holland <holland at eaglegenomics.com> on Fri, 20 Aug 2010 14:46:17 +0200
+
+It was downloaded from:
+
+    cvs://cvs.sanger.ac.uk
+
+Upstream Author(s):
+
+    <put author's name and email here>
+    <likewise for another author>
+
+Copyright:
+
+    <Copyright (C) YYYY Firstname Lastname>
+    <likewise for another author>
+
+License:
+
+    Copyright © 1999-2009 The European Bioinformatics Institute and
+    Genome Research Limited, and others. All rights reserved.
+
+    Redistribution and use in source and binary forms, with or without
+    modification, are permitted provided that the following conditions
+    are met:
+
+       1. Redistributions of source code must retain the above copyright
+          notice, this list of conditions and the following disclaimer.
+       2. Redistributions in binary form must reproduce the above
+          copyright notice, this list of conditions and the following
+          disclaimer in the documentation and/or other materials provided
+          with the distribution.
+       3. The name "Ensembl" must not be used to endorse or
+          promote products derived from this software without prior
+          written permission. For written permission, please contact
+          helpdesk at ensembl.org
+       4. Products derived from this software may not be called "Ensembl"
+          nor may "Ensembl" appear in their names without prior written
+          permission of the Ensembl developers.
+       5. Redistributions in any form whatsoever must retain the following
+          acknowledgement:
+
+          "This product includes software developed by Ensembl (http://www.ensembl.org/)." 
+    THIS SOFTWARE IS PROVIDED BY THE ENSEMBL GROUP "AS IS" AND ANY
+    EXPRESSED OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
+    IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
+    PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE ENSEMBL GROUP OR ITS
+    CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
+    EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
+    PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA,
+    OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY
+    THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
+    (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
+    OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+
+
+The Debian packaging is:
+
+    Copyright (C) 2010 Richard Holland <holland at eaglegenomics.com>
+
+and is licensed under the GPL version 3,
+see "/usr/share/common-licenses/GPL-3".
+

Added: trunk/packages/ensembl/ensembl/57/debian/ensembl.cron.d.ex
===================================================================
--- trunk/packages/ensembl/ensembl/57/debian/ensembl.cron.d.ex	                        (rev 0)
+++ trunk/packages/ensembl/ensembl/57/debian/ensembl.cron.d.ex	2010-08-20 13:15:52 UTC (rev 5170)
@@ -0,0 +1,4 @@
+#
+# Regular cron jobs for the ensembl package
+#
+0 4	* * *	root	[ -x /usr/bin/ensembl_maintenance ] && /usr/bin/ensembl_maintenance

Added: trunk/packages/ensembl/ensembl/57/debian/ensembl.debhelper.log
===================================================================
--- trunk/packages/ensembl/ensembl/57/debian/ensembl.debhelper.log	                        (rev 0)
+++ trunk/packages/ensembl/ensembl/57/debian/ensembl.debhelper.log	2010-08-20 13:15:52 UTC (rev 5170)
@@ -0,0 +1,14 @@
+dh_prep
+dh_installchangelogs
+dh_installdocs
+dh_installexamples
+dh_install
+dh_installman
+dh_strip
+dh_compress
+dh_fixperms
+dh_perl
+dh_installdeb
+dh_gencontrol
+dh_md5sums
+dh_builddeb

Added: trunk/packages/ensembl/ensembl/57/debian/ensembl.default.ex
===================================================================
--- trunk/packages/ensembl/ensembl/57/debian/ensembl.default.ex	                        (rev 0)
+++ trunk/packages/ensembl/ensembl/57/debian/ensembl.default.ex	2010-08-20 13:15:52 UTC (rev 5170)
@@ -0,0 +1,10 @@
+# Defaults for ensembl initscript
+# sourced by /etc/init.d/ensembl
+# installed at /etc/default/ensembl by the maintainer scripts
+
+#
+# This is a POSIX shell fragment
+#
+
+# Additional options that are passed to the Daemon.
+DAEMON_OPTS=""

Added: trunk/packages/ensembl/ensembl/57/debian/ensembl.dirs
===================================================================
--- trunk/packages/ensembl/ensembl/57/debian/ensembl.dirs	                        (rev 0)
+++ trunk/packages/ensembl/ensembl/57/debian/ensembl.dirs	2010-08-20 13:15:52 UTC (rev 5170)
@@ -0,0 +1 @@
+usr/share/ensembl

Added: trunk/packages/ensembl/ensembl/57/debian/ensembl.doc-base.EX
===================================================================
--- trunk/packages/ensembl/ensembl/57/debian/ensembl.doc-base.EX	                        (rev 0)
+++ trunk/packages/ensembl/ensembl/57/debian/ensembl.doc-base.EX	2010-08-20 13:15:52 UTC (rev 5170)
@@ -0,0 +1,20 @@
+Document: ensembl
+Title: Debian ensembl Manual
+Author: <insert document author here>
+Abstract: This manual describes what ensembl is
+ and how it can be used to
+ manage online manuals on Debian systems.
+Section: unknown
+
+Format: debiandoc-sgml
+Files: /usr/share/doc/ensembl/ensembl.sgml.gz
+
+Format: postscript
+Files: /usr/share/doc/ensembl/ensembl.ps.gz
+
+Format: text
+Files: /usr/share/doc/ensembl/ensembl.text.gz
+
+Format: HTML
+Index: /usr/share/doc/ensembl/html/index.html
+Files: /usr/share/doc/ensembl/html/*.html

Added: trunk/packages/ensembl/ensembl/57/debian/ensembl.substvars
===================================================================
--- trunk/packages/ensembl/ensembl/57/debian/ensembl.substvars	                        (rev 0)
+++ trunk/packages/ensembl/ensembl/57/debian/ensembl.substvars	2010-08-20 13:15:52 UTC (rev 5170)
@@ -0,0 +1,2 @@
+perl:Depends=perl
+misc:Depends=

Added: trunk/packages/ensembl/ensembl/57/debian/files
===================================================================
--- trunk/packages/ensembl/ensembl/57/debian/files	                        (rev 0)
+++ trunk/packages/ensembl/ensembl/57/debian/files	2010-08-20 13:15:52 UTC (rev 5170)
@@ -0,0 +1 @@
+ensembl_57-1_amd64.deb unknown extra

Added: trunk/packages/ensembl/ensembl/57/debian/init.d.ex
===================================================================
--- trunk/packages/ensembl/ensembl/57/debian/init.d.ex	                        (rev 0)
+++ trunk/packages/ensembl/ensembl/57/debian/init.d.ex	2010-08-20 13:15:52 UTC (rev 5170)
@@ -0,0 +1,154 @@
+#!/bin/sh
+### BEGIN INIT INFO
+# Provides:          ensembl
+# Required-Start:    $network $local_fs
+# Required-Stop:
+# Default-Start:     2 3 4 5
+# Default-Stop:      0 1 6
+# Short-Description: <Enter a short description of the sortware>
+# Description:       <Enter a long description of the software>
+#                    <...>
+#                    <...>
+### END INIT INFO
+
+# Author: Richard Holland <holland at eaglegenomics.com>
+
+# PATH should only include /usr/* if it runs after the mountnfs.sh script
+PATH=/sbin:/usr/sbin:/bin:/usr/bin
+DESC=ensembl             # Introduce a short description here
+NAME=ensembl             # Introduce the short server's name here
+DAEMON=/usr/sbin/ensembl # Introduce the server's location here
+DAEMON_ARGS=""             # Arguments to run the daemon with
+PIDFILE=/var/run/$NAME.pid
+SCRIPTNAME=/etc/init.d/$NAME
+
+# Exit if the package is not installed
+[ -x $DAEMON ] || exit 0
+
+# Read configuration variable file if it is present
+[ -r /etc/default/$NAME ] && . /etc/default/$NAME
+
+# Load the VERBOSE setting and other rcS variables
+. /lib/init/vars.sh
+
+# Define LSB log_* functions.
+# Depend on lsb-base (>= 3.0-6) to ensure that this file is present.
+. /lib/lsb/init-functions
+
+#
+# Function that starts the daemon/service
+#
+do_start()
+{
+	# Return
+	#   0 if daemon has been started
+	#   1 if daemon was already running
+	#   2 if daemon could not be started
+	start-stop-daemon --start --quiet --pidfile $PIDFILE --exec $DAEMON --test > /dev/null \
+		|| return 1
+	start-stop-daemon --start --quiet --pidfile $PIDFILE --exec $DAEMON -- \
+		$DAEMON_ARGS \
+		|| return 2
+	# Add code here, if necessary, that waits for the process to be ready
+	# to handle requests from services started subsequently which depend
+	# on this one.  As a last resort, sleep for some time.
+}
+
+#
+# Function that stops the daemon/service
+#
+do_stop()
+{
+	# Return
+	#   0 if daemon has been stopped
+	#   1 if daemon was already stopped
+	#   2 if daemon could not be stopped
+	#   other if a failure occurred
+	start-stop-daemon --stop --quiet --retry=TERM/30/KILL/5 --pidfile $PIDFILE --name $NAME
+	RETVAL="$?"
+	[ "$RETVAL" = 2 ] && return 2
+	# Wait for children to finish too if this is a daemon that forks
+	# and if the daemon is only ever run from this initscript.
+	# If the above conditions are not satisfied then add some other code
+	# that waits for the process to drop all resources that could be
+	# needed by services started subsequently.  A last resort is to
+	# sleep for some time.
+	start-stop-daemon --stop --quiet --oknodo --retry=0/30/KILL/5 --exec $DAEMON
+	[ "$?" = 2 ] && return 2
+	# Many daemons don't delete their pidfiles when they exit.
+	rm -f $PIDFILE
+	return "$RETVAL"
+}
+
+#
+# Function that sends a SIGHUP to the daemon/service
+#
+do_reload() {
+	#
+	# If the daemon can reload its configuration without
+	# restarting (for example, when it is sent a SIGHUP),
+	# then implement that here.
+	#
+	start-stop-daemon --stop --signal 1 --quiet --pidfile $PIDFILE --name $NAME
+	return 0
+}
+
+case "$1" in
+  start)
+    [ "$VERBOSE" != no ] && log_daemon_msg "Starting $DESC " "$NAME"
+    do_start
+    case "$?" in
+		0|1) [ "$VERBOSE" != no ] && log_end_msg 0 ;;
+		2) [ "$VERBOSE" != no ] && log_end_msg 1 ;;
+	esac
+  ;;
+  stop)
+	[ "$VERBOSE" != no ] && log_daemon_msg "Stopping $DESC" "$NAME"
+	do_stop
+	case "$?" in
+		0|1) [ "$VERBOSE" != no ] && log_end_msg 0 ;;
+		2) [ "$VERBOSE" != no ] && log_end_msg 1 ;;
+	esac
+	;;
+  status)
+       status_of_proc "$DAEMON" "$NAME" && exit 0 || exit $?
+       ;;
+  #reload|force-reload)
+	#
+	# If do_reload() is not implemented then leave this commented out
+	# and leave 'force-reload' as an alias for 'restart'.
+	#
+	#log_daemon_msg "Reloading $DESC" "$NAME"
+	#do_reload
+	#log_end_msg $?
+	#;;
+  restart|force-reload)
+	#
+	# If the "reload" option is implemented then remove the
+	# 'force-reload' alias
+	#
+	log_daemon_msg "Restarting $DESC" "$NAME"
+	do_stop
+	case "$?" in
+	  0|1)
+		do_start
+		case "$?" in
+			0) log_end_msg 0 ;;
+			1) log_end_msg 1 ;; # Old process is still running
+			*) log_end_msg 1 ;; # Failed to start
+		esac
+		;;
+	  *)
+	  	# Failed to stop
+		log_end_msg 1
+		;;
+	esac
+	;;
+  *)
+	#echo "Usage: $SCRIPTNAME {start|stop|restart|reload|force-reload}" >&2
+	echo "Usage: $SCRIPTNAME {start|stop|status|restart|force-reload}" >&2
+	exit 3
+	;;
+esac
+
+:

Added: trunk/packages/ensembl/ensembl/57/debian/postinst.ex
===================================================================
--- trunk/packages/ensembl/ensembl/57/debian/postinst.ex	                        (rev 0)
+++ trunk/packages/ensembl/ensembl/57/debian/postinst.ex	2010-08-20 13:15:52 UTC (rev 5170)
@@ -0,0 +1,39 @@
+#!/bin/sh
+# postinst script for ensembl
+#
+# see: dh_installdeb(1)
+
+set -e
+
+# summary of how this script can be called:
+#        * <postinst> `configure' <most-recently-configured-version>
+#        * <old-postinst> `abort-upgrade' <new version>
+#        * <conflictor's-postinst> `abort-remove' `in-favour' <package>
+#          <new-version>
+#        * <postinst> `abort-remove'
+#        * <deconfigured's-postinst> `abort-deconfigure' `in-favour'
+#          <failed-install-package> <version> `removing'
+#          <conflicting-package> <version>
+# for details, see http://www.debian.org/doc/debian-policy/ or
+# the debian-policy package
+
+
+case "$1" in
+    configure)
+    ;;
+
+    abort-upgrade|abort-remove|abort-deconfigure)
+    ;;
+
+    *)
+        echo "postinst called with unknown argument \`$1'" >&2
+        exit 1
+    ;;
+esac
+
+# dh_installdeb will replace this with shell code automatically
+# generated by other debhelper scripts.
+
+#DEBHELPER#
+
+exit 0

Added: trunk/packages/ensembl/ensembl/57/debian/postrm.ex
===================================================================
--- trunk/packages/ensembl/ensembl/57/debian/postrm.ex	                        (rev 0)
+++ trunk/packages/ensembl/ensembl/57/debian/postrm.ex	2010-08-20 13:15:52 UTC (rev 5170)
@@ -0,0 +1,37 @@
+#!/bin/sh
+# postrm script for ensembl
+#
+# see: dh_installdeb(1)
+
+set -e
+
+# summary of how this script can be called:
+#        * <postrm> `remove'
+#        * <postrm> `purge'
+#        * <old-postrm> `upgrade' <new-version>
+#        * <new-postrm> `failed-upgrade' <old-version>
+#        * <new-postrm> `abort-install'
+#        * <new-postrm> `abort-install' <old-version>
+#        * <new-postrm> `abort-upgrade' <old-version>
+#        * <disappearer's-postrm> `disappear' <overwriter>
+#          <overwriter-version>
+# for details, see http://www.debian.org/doc/debian-policy/ or
+# the debian-policy package
+
+
+case "$1" in
+    purge|remove|upgrade|failed-upgrade|abort-install|abort-upgrade|disappear)
+    ;;
+
+    *)
+        echo "postrm called with unknown argument \`$1'" >&2
+        exit 1
+    ;;
+esac
+
+# dh_installdeb will replace this with shell code automatically
+# generated by other debhelper scripts.
+
+#DEBHELPER#
+
+exit 0

Added: trunk/packages/ensembl/ensembl/57/debian/preinst.ex
===================================================================
--- trunk/packages/ensembl/ensembl/57/debian/preinst.ex	                        (rev 0)
+++ trunk/packages/ensembl/ensembl/57/debian/preinst.ex	2010-08-20 13:15:52 UTC (rev 5170)
@@ -0,0 +1,35 @@
+#!/bin/sh
+# preinst script for ensembl
+#
+# see: dh_installdeb(1)
+
+set -e
+
+# summary of how this script can be called:
+#        * <new-preinst> `install'
+#        * <new-preinst> `install' <old-version>
+#        * <new-preinst> `upgrade' <old-version>
+#        * <old-preinst> `abort-upgrade' <new-version>
+# for details, see http://www.debian.org/doc/debian-policy/ or
+# the debian-policy package
+
+
+case "$1" in
+    install|upgrade)
+    ;;
+
+    abort-upgrade)
+    ;;
+
+    *)
+        echo "preinst called with unknown argument \`$1'" >&2
+        exit 1
+    ;;
+esac
+
+# dh_installdeb will replace this with shell code automatically
+# generated by other debhelper scripts.
+
+#DEBHELPER#
+
+exit 0

Added: trunk/packages/ensembl/ensembl/57/debian/prerm.ex
===================================================================
--- trunk/packages/ensembl/ensembl/57/debian/prerm.ex	                        (rev 0)
+++ trunk/packages/ensembl/ensembl/57/debian/prerm.ex	2010-08-20 13:15:52 UTC (rev 5170)
@@ -0,0 +1,38 @@
+#!/bin/sh
+# prerm script for ensembl
+#
+# see: dh_installdeb(1)
+
+set -e
+
+# summary of how this script can be called:
+#        * <prerm> `remove'
+#        * <old-prerm> `upgrade' <new-version>
+#        * <new-prerm> `failed-upgrade' <old-version>
+#        * <conflictor's-prerm> `remove' `in-favour' <package> <new-version>
+#        * <deconfigured's-prerm> `deconfigure' `in-favour'
+#          <package-being-installed> <version> `removing'
+#          <conflicting-package> <version>
+# for details, see http://www.debian.org/doc/debian-policy/ or
+# the debian-policy package
+
+
+case "$1" in
+    remove|upgrade|deconfigure)
+    ;;
+
+    failed-upgrade)
+    ;;
+
+    *)
+        echo "prerm called with unknown argument \`$1'" >&2
+        exit 1
+    ;;
+esac
+
+# dh_installdeb will replace this with shell code automatically
+# generated by other debhelper scripts.
+
+#DEBHELPER#
+
+exit 0

Added: trunk/packages/ensembl/ensembl/57/debian/rules
===================================================================
--- trunk/packages/ensembl/ensembl/57/debian/rules	                        (rev 0)
+++ trunk/packages/ensembl/ensembl/57/debian/rules	2010-08-20 13:15:52 UTC (rev 5170)
@@ -0,0 +1,63 @@
+#!/usr/bin/make -f
+# -*- makefile -*-
+# Sample debian/rules that uses debhelper.
+# This file was originally written by Joey Hess and Craig Small.
+# As a special exception, when this file is copied by dh-make into a
+# dh-make output file, you may use that output file without restriction.
+# This special exception was added by Craig Small in version 0.37 of dh-make.
+
+# Uncomment this to turn on verbose mode.
+#export DH_VERBOSE=1
+
+configure: configure-stamp
+configure-stamp:
+	# nothing to be configured
+	touch configure-stamp
+
+build: build-stamp
+build-stamp:
+	# nothing to be built
+	touch build-stamp
+
+install: 
+	dh_testdir
+	dh_testroot
+	dh_prep
+	d=$(CURDIR)/debian/ensembl/usr/share/ensembl ; \
+	if [ ! -d "$$d" ]; then \
+		echo "Creating directory '$$d'." ; \
+		mkdir -p "$$d" ; \
+	fi ; \
+	cp -r conf ctrl_scripts ensembl ensembl-compara \
+		ensembl-draw ensembl-external \
+		ensembl-functgenomics ensembl-variation \
+		htdocs modules perl public-plugins utils \
+	    $$d
+
+
+binary-indep:
+	# nothing to do for binary-indep
+
+binary-arch: build install
+	dh_testdir
+	dh_testroot
+	dh_installchangelogs
+	dh_installdocs
+	dh_installexamples
+	dh_install
+	dh_installman
+	dh_strip
+	dh_compress
+	dh_fixperms
+	dh_perl
+	dh_installdeb
+	dh_gencontrol
+	dh_md5sums
+	dh_builddeb
+
+clean:
+	dh_clean
+
+binary: binary-indep binary-arch
+
+.PHONY: build clean binary-indep binary-arch binary configure build install


Property changes on: trunk/packages/ensembl/ensembl/57/debian/rules
___________________________________________________________________
Added: svn:executable
   + *

Added: trunk/packages/ensembl/ensembl/57/debian/source/format
===================================================================
--- trunk/packages/ensembl/ensembl/57/debian/source/format	                        (rev 0)
+++ trunk/packages/ensembl/ensembl/57/debian/source/format	2010-08-20 13:15:52 UTC (rev 5170)
@@ -0,0 +1 @@
+3.0 (quilt)

Added: trunk/packages/ensembl/ensembl/57/debian/watch.ex
===================================================================
--- trunk/packages/ensembl/ensembl/57/debian/watch.ex	                        (rev 0)
+++ trunk/packages/ensembl/ensembl/57/debian/watch.ex	2010-08-20 13:15:52 UTC (rev 5170)
@@ -0,0 +1,2 @@
+version=3
+http://www.ensembl.org Release\s+(\d+)\s+




More information about the debian-med-commit mailing list