[med-svn] [SCM] picard-tools branch, master, updated. upstream/1.41-40-gc89127e

[Charles Plessy]

The following commit has been merged in the master branch:
commit b184b73871b41eba4f8b767ad940db6e34a634a7
Merge: d0de36c0285ee0711f2e1f7fc691adc5ebbe2b8a 0c4cbc066e4417ee053d119f84ce71f224923e98
Author: Charles Plessy <plessy at debian.org>
Date:   Fri Jun 3 20:05:29 2011 +0900

    Merge commit 'upstream/1.43'


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manipulate SAM and BAM files