[med-svn] r7181 - trunk/packages/R/r-cran-genetics/trunk/debian
Charles Plessy
plessy at alioth.debian.org
Wed Jun 29 14:35:14 UTC 2011
Author: plessy
Date: 2011-06-29 14:35:14 +0000 (Wed, 29 Jun 2011)
New Revision: 7181
Added:
trunk/packages/R/r-cran-genetics/trunk/debian/README.test
trunk/packages/R/r-cran-genetics/trunk/debian/docs
Removed:
trunk/packages/R/r-cran-genetics/trunk/debian/README.Debian
Modified:
trunk/packages/R/r-cran-genetics/trunk/debian/changelog
trunk/packages/R/r-cran-genetics/trunk/debian/compat
trunk/packages/R/r-cran-genetics/trunk/debian/control
trunk/packages/R/r-cran-genetics/trunk/debian/copyright
Log:
Fix building by (Build-)Depending on r-cran-mass, which provides r-cran-vr (LP: #755951).
Other changes:
* debian/control:
- Corrected VCS URLs.
- Using Debhelper 8 (debian/compat)
- Incremented Standards-Version to reflect conformance with Policy 3.9.2
(no changes needed).
* Formatted debian/copyright to machine-readable DEP-5 format.
* Install tests in ?\226?\128?\156/usr/share/doc/r-cran-genetics/tests?\226?\128?\157 (debian/docs),
document them (debian/README.test), and remove wrong comment that no tests
are available (debian/README.Debian).
Deleted: trunk/packages/R/r-cran-genetics/trunk/debian/README.Debian
===================================================================
--- trunk/packages/R/r-cran-genetics/trunk/debian/README.Debian 2011-06-29 14:12:12 UTC (rev 7180)
+++ trunk/packages/R/r-cran-genetics/trunk/debian/README.Debian 2011-06-29 14:35:14 UTC (rev 7181)
@@ -1,8 +0,0 @@
-genetics CRAN package for Debian
---------------------------------
-
-Note on testing:
-
-Since this package does not have regression checks nor instructions for
-performing some manually, it was not thoroughly tested before its upload to the
-Debian archive.
Copied: trunk/packages/R/r-cran-genetics/trunk/debian/README.test (from rev 7178, trunk/packages/R/r-cran-genetics/trunk/debian/README.Debian)
===================================================================
--- trunk/packages/R/r-cran-genetics/trunk/debian/README.test (rev 0)
+++ trunk/packages/R/r-cran-genetics/trunk/debian/README.test 2011-06-29 14:35:14 UTC (rev 7181)
@@ -0,0 +1,2 @@
+After installing this package, you can test it with the commands in the
+directory “/usr/share/doc/r-cran-genetics/tests”.
Modified: trunk/packages/R/r-cran-genetics/trunk/debian/changelog
===================================================================
--- trunk/packages/R/r-cran-genetics/trunk/debian/changelog 2011-06-29 14:12:12 UTC (rev 7180)
+++ trunk/packages/R/r-cran-genetics/trunk/debian/changelog 2011-06-29 14:35:14 UTC (rev 7181)
@@ -1,3 +1,18 @@
+r-cran-genetics (1.3.6-2) unstable; urgency=low
+
+ * debian/control:
+ - (Build-)Depend on r-cran-mass, which provides r-cran-vr (LP: #755951).
+ - Corrected VCS URLs.
+ - Using Debhelper 8 (debian/compat)
+ - Incremented Standards-Version to reflect conformance with Policy 3.9.2
+ (no changes needed).
+ * Formatted debian/copyright to machine-readable DEP-5 format.
+ * Install tests in “/usr/share/doc/r-cran-genetics/tests” (debian/docs),
+ document them (debian/README.test), and remove wrong comment that no tests
+ are available (debian/README.Debian).
+
+ -- Charles Plessy <plessy at debian.org> Wed, 29 Jun 2011 23:25:13 +0900
+
r-cran-genetics (1.3.6-1) unstable; urgency=low
* New upstream version
@@ -48,7 +63,7 @@
* New upstream version released more than three months ago
- * debian/control: Added r-cran-gdata, r-cran-gtools, r-cran-vr
+ * debian/control: Added r-cran-gdata, r-cran-goods, r-cran-vr
to Build-Depends to fix FTBFS
* debian/control: Removed myself from uploaders as
Modified: trunk/packages/R/r-cran-genetics/trunk/debian/compat
===================================================================
--- trunk/packages/R/r-cran-genetics/trunk/debian/compat 2011-06-29 14:12:12 UTC (rev 7180)
+++ trunk/packages/R/r-cran-genetics/trunk/debian/compat 2011-06-29 14:35:14 UTC (rev 7181)
@@ -1 +1 @@
-7
+8
Modified: trunk/packages/R/r-cran-genetics/trunk/debian/control
===================================================================
--- trunk/packages/R/r-cran-genetics/trunk/debian/control 2011-06-29 14:12:12 UTC (rev 7180)
+++ trunk/packages/R/r-cran-genetics/trunk/debian/control 2011-06-29 14:35:14 UTC (rev 7181)
@@ -6,15 +6,15 @@
Uploaders: Steffen Moeller <moeller at debian.org>,
Charles Plessy <plessy at debian.org>,
Andreas Tille <tille at debian.org>
-Build-Depends: debhelper (>= 7), cdbs, r-base-dev, r-cran-combinat, r-cran-mvtnorm, r-cran-gdata, r-cran-gtools, r-cran-vr
-Standards-Version: 3.9.1
-Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/R/r-cran-genetics/trunk/?rev=0&sc=0
-Vcs-Svn: svn://svn.debian.org/svn/debian-med/trunk/packages/R/r-cran-genetics/trunk/
+Build-Depends: debhelper (>= 8), cdbs, r-base-dev, r-cran-combinat, r-cran-mvtnorm, r-cran-gdata, r-cran-gtools, r-cran-mass
+Standards-Version: 3.9.2
+Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/R/r-cran-genetics/trunk/
+Vcs-Svn: svn://svn.debian.org/debian-med/trunk/packages/R/r-cran-genetics/trunk/
Homepage: http://cran.r-project.org/web/packages/genetics
Package: r-cran-genetics
Architecture: all
-Depends: ${R:Depends}, ${misc:Depends}, r-recommended, r-cran-gtools, r-cran-gdata, r-cran-combinat, r-cran-mvtnorm, r-cran-vr
+Depends: ${R:Depends}, ${misc:Depends}, r-recommended, r-cran-gtools, r-cran-gdata, r-cran-combinat, r-cran-mvtnorm, r-cran-mass
Description: GNU R package for population genetics
Classes and methods for handling genetic data. Includes
The package provides a library for the statistics environment R that
Modified: trunk/packages/R/r-cran-genetics/trunk/debian/copyright
===================================================================
--- trunk/packages/R/r-cran-genetics/trunk/debian/copyright 2011-06-29 14:12:12 UTC (rev 7180)
+++ trunk/packages/R/r-cran-genetics/trunk/debian/copyright 2011-06-29 14:35:14 UTC (rev 7181)
@@ -1,57 +1,48 @@
-Name : genetics
-Contact : Gregory Warnes <warnes at bst.rochester.edu>
-Source : http://cran.r-project.org/src/contrib/
+Format: http://dep.debian.net/deps/dep5/
+Source: http://cran.r-project.org/src/contrib/genetics_1.3.6.tar.gz
-Copyright :
- Genetics is copyright 2003-2008 of Gregory Warnes
- <warnes at bst.rochester.edu>, with contributions from David Duffy
- <davidD at qumr.edu.au>, Gregor Gorjanc, Friedrich Leisch, and Michael Man.
+Files: *
+Copyright : Genetics is copyright 2003-2008 of Gregory Warnes <warnes at bst.rochester.edu>,
+ with contributions from David Duffy <davidD at qumr.edu.au>,
+ Gregor Gorjanc,
+ Friedrich Leisch,
+ and Michael Man.
+License: GPL-2+
+ This program is free software; you can redistribute it and/or modify
+ it under the terms of the GNU General Public License as published by
+ the Free Software Foundation; either version 2 of the License, or
+ (at your option) any later version.
+ .
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU General Public License for more details.
+ .
+ You should have received a copy of the GNU General Public License along
+ with this program; if not, write to the Free Software Foundation, Inc.,
+ 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
+Comment: On a Debian GNU/Linux system, the GNU General Public License
+ version 2 is included in the file ‘/usr/share/common-licenses/GPL-2’.
-License: GPL
-
- This program is free software; you can redistribute it and/or modify
- it under the terms of the GNU General Public License as published by
- the Free Software Foundation; either version 2 of the License, or
- (at your option) any later version.
-
- This program is distributed in the hope that it will be useful,
- but WITHOUT ANY WARRANTY; without even the implied warranty of
- MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
- GNU General Public License for more details.
-
- You should have received a copy of the GNU General Public License along
- with this program; if not, write to the Free Software Foundation, Inc.,
- 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
-
-On a Debian GNU/Linux system, the GNU General Public License version 2 is
-included in the file ‘/usr/share/common-licenses/GPL-2’.
-
-The package was renamed from its upstream name 'genetics' to
-'r-cran-genetics' to highlight the fact that is it a package for R within
-the CRAN archive.
-
-
-File: inst/doc/Rnews.sty
-Copyright:
-License:
+Files: inst/doc/Rnews.sty
+Copyright: see the source file.
+License: Rnews.sty
For the copyright see the source file.
-
+ .
Any modified versions of this file must be renamed
with new filenames distinct from Rnews.sty.
-
+ .
For distribution of the original source see the terms
for copying and modification in the file Rnews.dtx.
-
+ .
This generated file may be distributed as long as the
original source files, as listed above, are part of the
same distribution. (The sources need not necessarily be
in the same archive or directory.)
-
Files: debian/*
Copyright: © 2008 Steffen Moeller <moeller at debian.org>
-License: same as genetics
-
-This package was created by Steffen Moeller <moeller at debian.org>,
-based on work for the r-cran-rodbc package of Dirk
-Eddelbuettel <edd at debian.org>.
+License: same-as-genetics
+ This package was created by Steffen Moeller <moeller at debian.org>,
+ based on work for the r-cran-rodbc package of Dirk
+ Eddelbuettel <edd at debian.org>.
Added: trunk/packages/R/r-cran-genetics/trunk/debian/docs
===================================================================
--- trunk/packages/R/r-cran-genetics/trunk/debian/docs (rev 0)
+++ trunk/packages/R/r-cran-genetics/trunk/debian/docs 2011-06-29 14:35:14 UTC (rev 7181)
@@ -0,0 +1 @@
+tests
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