[med-svn] [SCM] cufflinks branch, master, updated. upstream/0.9.3-21-g7df8ccc
Alex Mestiashvili
alex at biotec.tu-dresden.de
Wed May 25 07:53:10 UTC 2011
The following commit has been merged in the master branch:
commit 7df8ccca5f3cdfa35b3477a885615dc4af058fd4
Author: Alex Mestiashvili <alex at biotec.tu-dresden.de>
Date: Wed May 25 09:45:22 2011 +0200
fixing rep
diff --git a/configure.orig b/configure.orig
deleted file mode 100755
index ae66f5e..0000000
--- a/configure.orig
+++ /dev/null
@@ -1,8651 +0,0 @@
-#! /bin/sh
-# Guess values for system-dependent variables and create Makefiles.
-# Generated by GNU Autoconf 2.59 for cufflinks 1.0.2.
-#
-# Report bugs to <cole at cs.umd.edu>.
-#
-# Copyright (C) 2003 Free Software Foundation, Inc.
-# This configure script is free software; the Free Software Foundation
-# gives unlimited permission to copy, distribute and modify it.
-## --------------------- ##
-## M4sh Initialization. ##
-## --------------------- ##
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- NULLCMD=:
- # Zsh 3.x and 4.x performs word splitting on ${1+"$@"}, which
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- alias -g '${1+"$@"}'='"$@"'
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-
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-
-
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-cat >>confdefs.h <<\_ACEOF
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-
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- if test -n "$ac_ct_STRIP"; then
- ac_cv_prog_ac_ct_STRIP="$ac_ct_STRIP" # Let the user override the test.
-else
-as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
-for as_dir in $PATH
-do
- IFS=$as_save_IFS
- test -z "$as_dir" && as_dir=.
- for ac_exec_ext in '' $ac_executable_extensions; do
- if $as_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
- ac_cv_prog_ac_ct_STRIP="strip"
- echo "$as_me:$LINENO: found $as_dir/$ac_word$ac_exec_ext" >&5
- break 2
- fi
-done
-done
-
- test -z "$ac_cv_prog_ac_ct_STRIP" && ac_cv_prog_ac_ct_STRIP=":"
-fi
-fi
-ac_ct_STRIP=$ac_cv_prog_ac_ct_STRIP
-if test -n "$ac_ct_STRIP"; then
- echo "$as_me:$LINENO: result: $ac_ct_STRIP" >&5
-echo "${ECHO_T}$ac_ct_STRIP" >&6
-else
- echo "$as_me:$LINENO: result: no" >&5
-echo "${ECHO_T}no" >&6
-fi
-
- STRIP=$ac_ct_STRIP
-else
- STRIP="$ac_cv_prog_STRIP"
-fi
-
-fi
-INSTALL_STRIP_PROGRAM="\${SHELL} \$(install_sh) -c -s"
-
-# We need awk for the "check" target. The system "awk" is bad on
-# some platforms.
-# Always define AMTAR for backward compatibility.
-
-AMTAR=${AMTAR-"${am_missing_run}tar"}
-
-am__tar='${AMTAR} chof - "$$tardir"'; am__untar='${AMTAR} xf -'
-
-
-
-
-
-
-#AM_PATH_CPPUNIT(1.10.2)
-
-
-
- # Make sure CXXFLAGS is defined so that AC_PROG_CXX doesn't set it.
-CXXFLAGS="$CXXFLAGS"
-CFLAGS="$CFLAGS"
-
-ac_ext=c
-ac_cpp='$CPP $CPPFLAGS'
-ac_compile='$CC -c $CFLAGS $CPPFLAGS conftest.$ac_ext >&5'
-ac_link='$CC -o conftest$ac_exeext $CFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5'
-ac_compiler_gnu=$ac_cv_c_compiler_gnu
-
-
-# Checks for programs.
-for ac_prog in gawk mawk nawk awk
-do
- # Extract the first word of "$ac_prog", so it can be a program name with args.
-set dummy $ac_prog; ac_word=$2
-echo "$as_me:$LINENO: checking for $ac_word" >&5
-echo $ECHO_N "checking for $ac_word... $ECHO_C" >&6
-if test "${ac_cv_prog_AWK+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- if test -n "$AWK"; then
- ac_cv_prog_AWK="$AWK" # Let the user override the test.
-else
-as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
-for as_dir in $PATH
-do
- IFS=$as_save_IFS
- test -z "$as_dir" && as_dir=.
- for ac_exec_ext in '' $ac_executable_extensions; do
- if $as_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
- ac_cv_prog_AWK="$ac_prog"
- echo "$as_me:$LINENO: found $as_dir/$ac_word$ac_exec_ext" >&5
- break 2
- fi
-done
-done
-
-fi
-fi
-AWK=$ac_cv_prog_AWK
-if test -n "$AWK"; then
- echo "$as_me:$LINENO: result: $AWK" >&5
-echo "${ECHO_T}$AWK" >&6
-else
- echo "$as_me:$LINENO: result: no" >&5
-echo "${ECHO_T}no" >&6
-fi
-
- test -n "$AWK" && break
-done
-
-ac_ext=cc
-ac_cpp='$CXXCPP $CPPFLAGS'
-ac_compile='$CXX -c $CXXFLAGS $CPPFLAGS conftest.$ac_ext >&5'
-ac_link='$CXX -o conftest$ac_exeext $CXXFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5'
-ac_compiler_gnu=$ac_cv_cxx_compiler_gnu
-if test -n "$ac_tool_prefix"; then
- for ac_prog in $CCC g++ c++ gpp aCC CC cxx cc++ cl FCC KCC RCC xlC_r xlC
- do
- # Extract the first word of "$ac_tool_prefix$ac_prog", so it can be a program name with args.
-set dummy $ac_tool_prefix$ac_prog; ac_word=$2
-echo "$as_me:$LINENO: checking for $ac_word" >&5
-echo $ECHO_N "checking for $ac_word... $ECHO_C" >&6
-if test "${ac_cv_prog_CXX+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- if test -n "$CXX"; then
- ac_cv_prog_CXX="$CXX" # Let the user override the test.
-else
-as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
-for as_dir in $PATH
-do
- IFS=$as_save_IFS
- test -z "$as_dir" && as_dir=.
- for ac_exec_ext in '' $ac_executable_extensions; do
- if $as_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
- ac_cv_prog_CXX="$ac_tool_prefix$ac_prog"
- echo "$as_me:$LINENO: found $as_dir/$ac_word$ac_exec_ext" >&5
- break 2
- fi
-done
-done
-
-fi
-fi
-CXX=$ac_cv_prog_CXX
-if test -n "$CXX"; then
- echo "$as_me:$LINENO: result: $CXX" >&5
-echo "${ECHO_T}$CXX" >&6
-else
- echo "$as_me:$LINENO: result: no" >&5
-echo "${ECHO_T}no" >&6
-fi
-
- test -n "$CXX" && break
- done
-fi
-if test -z "$CXX"; then
- ac_ct_CXX=$CXX
- for ac_prog in $CCC g++ c++ gpp aCC CC cxx cc++ cl FCC KCC RCC xlC_r xlC
-do
- # Extract the first word of "$ac_prog", so it can be a program name with args.
-set dummy $ac_prog; ac_word=$2
-echo "$as_me:$LINENO: checking for $ac_word" >&5
-echo $ECHO_N "checking for $ac_word... $ECHO_C" >&6
-if test "${ac_cv_prog_ac_ct_CXX+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- if test -n "$ac_ct_CXX"; then
- ac_cv_prog_ac_ct_CXX="$ac_ct_CXX" # Let the user override the test.
-else
-as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
-for as_dir in $PATH
-do
- IFS=$as_save_IFS
- test -z "$as_dir" && as_dir=.
- for ac_exec_ext in '' $ac_executable_extensions; do
- if $as_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
- ac_cv_prog_ac_ct_CXX="$ac_prog"
- echo "$as_me:$LINENO: found $as_dir/$ac_word$ac_exec_ext" >&5
- break 2
- fi
-done
-done
-
-fi
-fi
-ac_ct_CXX=$ac_cv_prog_ac_ct_CXX
-if test -n "$ac_ct_CXX"; then
- echo "$as_me:$LINENO: result: $ac_ct_CXX" >&5
-echo "${ECHO_T}$ac_ct_CXX" >&6
-else
- echo "$as_me:$LINENO: result: no" >&5
-echo "${ECHO_T}no" >&6
-fi
-
- test -n "$ac_ct_CXX" && break
-done
-test -n "$ac_ct_CXX" || ac_ct_CXX="g++"
-
- CXX=$ac_ct_CXX
-fi
-
-
-# Provide some information about the compiler.
-echo "$as_me:$LINENO:" \
- "checking for C++ compiler version" >&5
-ac_compiler=`set X $ac_compile; echo $2`
-{ (eval echo "$as_me:$LINENO: \"$ac_compiler --version </dev/null >&5\"") >&5
- (eval $ac_compiler --version </dev/null >&5) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }
-{ (eval echo "$as_me:$LINENO: \"$ac_compiler -v </dev/null >&5\"") >&5
- (eval $ac_compiler -v </dev/null >&5) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }
-{ (eval echo "$as_me:$LINENO: \"$ac_compiler -V </dev/null >&5\"") >&5
- (eval $ac_compiler -V </dev/null >&5) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }
-
-cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-
-int
-main ()
-{
-
- ;
- return 0;
-}
-_ACEOF
-ac_clean_files_save=$ac_clean_files
-ac_clean_files="$ac_clean_files a.out a.exe b.out"
-# Try to create an executable without -o first, disregard a.out.
-# It will help us diagnose broken compilers, and finding out an intuition
-# of exeext.
-echo "$as_me:$LINENO: checking for C++ compiler default output file name" >&5
-echo $ECHO_N "checking for C++ compiler default output file name... $ECHO_C" >&6
-ac_link_default=`echo "$ac_link" | sed 's/ -o *conftest[^ ]*//'`
-if { (eval echo "$as_me:$LINENO: \"$ac_link_default\"") >&5
- (eval $ac_link_default) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; then
- # Find the output, starting from the most likely. This scheme is
-# not robust to junk in `.', hence go to wildcards (a.*) only as a last
-# resort.
-
-# Be careful to initialize this variable, since it used to be cached.
-# Otherwise an old cache value of `no' led to `EXEEXT = no' in a Makefile.
-ac_cv_exeext=
-# b.out is created by i960 compilers.
-for ac_file in a_out.exe a.exe conftest.exe a.out conftest a.* conftest.* b.out
-do
- test -f "$ac_file" || continue
- case $ac_file in
- *.$ac_ext | *.xcoff | *.tds | *.d | *.pdb | *.xSYM | *.bb | *.bbg | *.o | *.obj )
- ;;
- conftest.$ac_ext )
- # This is the source file.
- ;;
- [ab].out )
- # We found the default executable, but exeext='' is most
- # certainly right.
- break;;
- *.* )
- ac_cv_exeext=`expr "$ac_file" : '[^.]*\(\..*\)'`
- # FIXME: I believe we export ac_cv_exeext for Libtool,
- # but it would be cool to find out if it's true. Does anybody
- # maintain Libtool? --akim.
- export ac_cv_exeext
- break;;
- * )
- break;;
- esac
-done
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-{ { echo "$as_me:$LINENO: error: C++ compiler cannot create executables
-See \`config.log' for more details." >&5
-echo "$as_me: error: C++ compiler cannot create executables
-See \`config.log' for more details." >&2;}
- { (exit 77); exit 77; }; }
-fi
-
-ac_exeext=$ac_cv_exeext
-echo "$as_me:$LINENO: result: $ac_file" >&5
-echo "${ECHO_T}$ac_file" >&6
-
-# Check the compiler produces executables we can run. If not, either
-# the compiler is broken, or we cross compile.
-echo "$as_me:$LINENO: checking whether the C++ compiler works" >&5
-echo $ECHO_N "checking whether the C++ compiler works... $ECHO_C" >&6
-# FIXME: These cross compiler hacks should be removed for Autoconf 3.0
-# If not cross compiling, check that we can run a simple program.
-if test "$cross_compiling" != yes; then
- if { ac_try='./$ac_file'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
- cross_compiling=no
- else
- if test "$cross_compiling" = maybe; then
- cross_compiling=yes
- else
- { { echo "$as_me:$LINENO: error: cannot run C++ compiled programs.
-If you meant to cross compile, use \`--host'.
-See \`config.log' for more details." >&5
-echo "$as_me: error: cannot run C++ compiled programs.
-If you meant to cross compile, use \`--host'.
-See \`config.log' for more details." >&2;}
- { (exit 1); exit 1; }; }
- fi
- fi
-fi
-echo "$as_me:$LINENO: result: yes" >&5
-echo "${ECHO_T}yes" >&6
-
-rm -f a.out a.exe conftest$ac_cv_exeext b.out
-ac_clean_files=$ac_clean_files_save
-# Check the compiler produces executables we can run. If not, either
-# the compiler is broken, or we cross compile.
-echo "$as_me:$LINENO: checking whether we are cross compiling" >&5
-echo $ECHO_N "checking whether we are cross compiling... $ECHO_C" >&6
-echo "$as_me:$LINENO: result: $cross_compiling" >&5
-echo "${ECHO_T}$cross_compiling" >&6
-
-echo "$as_me:$LINENO: checking for suffix of executables" >&5
-echo $ECHO_N "checking for suffix of executables... $ECHO_C" >&6
-if { (eval echo "$as_me:$LINENO: \"$ac_link\"") >&5
- (eval $ac_link) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; then
- # If both `conftest.exe' and `conftest' are `present' (well, observable)
-# catch `conftest.exe'. For instance with Cygwin, `ls conftest' will
-# work properly (i.e., refer to `conftest.exe'), while it won't with
-# `rm'.
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- test -f "$ac_file" || continue
- case $ac_file in
- *.$ac_ext | *.xcoff | *.tds | *.d | *.pdb | *.xSYM | *.bb | *.bbg | *.o | *.obj ) ;;
- *.* ) ac_cv_exeext=`expr "$ac_file" : '[^.]*\(\..*\)'`
- export ac_cv_exeext
- break;;
- * ) break;;
- esac
-done
-else
- { { echo "$as_me:$LINENO: error: cannot compute suffix of executables: cannot compile and link
-See \`config.log' for more details." >&5
-echo "$as_me: error: cannot compute suffix of executables: cannot compile and link
-See \`config.log' for more details." >&2;}
- { (exit 1); exit 1; }; }
-fi
-
-rm -f conftest$ac_cv_exeext
-echo "$as_me:$LINENO: result: $ac_cv_exeext" >&5
-echo "${ECHO_T}$ac_cv_exeext" >&6
-
-rm -f conftest.$ac_ext
-EXEEXT=$ac_cv_exeext
-ac_exeext=$EXEEXT
-echo "$as_me:$LINENO: checking for suffix of object files" >&5
-echo $ECHO_N "checking for suffix of object files... $ECHO_C" >&6
-if test "${ac_cv_objext+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-
-int
-main ()
-{
-
- ;
- return 0;
-}
-_ACEOF
-rm -f conftest.o conftest.obj
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; then
- for ac_file in `(ls conftest.o conftest.obj; ls conftest.*) 2>/dev/null`; do
- case $ac_file in
- *.$ac_ext | *.xcoff | *.tds | *.d | *.pdb | *.xSYM | *.bb | *.bbg ) ;;
- *) ac_cv_objext=`expr "$ac_file" : '.*\.\(.*\)'`
- break;;
- esac
-done
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-{ { echo "$as_me:$LINENO: error: cannot compute suffix of object files: cannot compile
-See \`config.log' for more details." >&5
-echo "$as_me: error: cannot compute suffix of object files: cannot compile
-See \`config.log' for more details." >&2;}
- { (exit 1); exit 1; }; }
-fi
-
-rm -f conftest.$ac_cv_objext conftest.$ac_ext
-fi
-echo "$as_me:$LINENO: result: $ac_cv_objext" >&5
-echo "${ECHO_T}$ac_cv_objext" >&6
-OBJEXT=$ac_cv_objext
-ac_objext=$OBJEXT
-echo "$as_me:$LINENO: checking whether we are using the GNU C++ compiler" >&5
-echo $ECHO_N "checking whether we are using the GNU C++ compiler... $ECHO_C" >&6
-if test "${ac_cv_cxx_compiler_gnu+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-
-int
-main ()
-{
-#ifndef __GNUC__
- choke me
-#endif
-
- ;
- return 0;
-}
-_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_cxx_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
- ac_compiler_gnu=yes
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-ac_compiler_gnu=no
-fi
-rm -f conftest.err conftest.$ac_objext conftest.$ac_ext
-ac_cv_cxx_compiler_gnu=$ac_compiler_gnu
-
-fi
-echo "$as_me:$LINENO: result: $ac_cv_cxx_compiler_gnu" >&5
-echo "${ECHO_T}$ac_cv_cxx_compiler_gnu" >&6
-GXX=`test $ac_compiler_gnu = yes && echo yes`
-ac_test_CXXFLAGS=${CXXFLAGS+set}
-ac_save_CXXFLAGS=$CXXFLAGS
-CXXFLAGS="-g"
-echo "$as_me:$LINENO: checking whether $CXX accepts -g" >&5
-echo $ECHO_N "checking whether $CXX accepts -g... $ECHO_C" >&6
-if test "${ac_cv_prog_cxx_g+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-
-int
-main ()
-{
-
- ;
- return 0;
-}
-_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_cxx_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
- ac_cv_prog_cxx_g=yes
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-ac_cv_prog_cxx_g=no
-fi
-rm -f conftest.err conftest.$ac_objext conftest.$ac_ext
-fi
-echo "$as_me:$LINENO: result: $ac_cv_prog_cxx_g" >&5
-echo "${ECHO_T}$ac_cv_prog_cxx_g" >&6
-if test "$ac_test_CXXFLAGS" = set; then
- CXXFLAGS=$ac_save_CXXFLAGS
-elif test $ac_cv_prog_cxx_g = yes; then
- if test "$GXX" = yes; then
- CXXFLAGS="-g -O2"
- else
- CXXFLAGS="-g"
- fi
-else
- if test "$GXX" = yes; then
- CXXFLAGS="-O2"
- else
- CXXFLAGS=
- fi
-fi
-for ac_declaration in \
- '' \
- 'extern "C" void std::exit (int) throw (); using std::exit;' \
- 'extern "C" void std::exit (int); using std::exit;' \
- 'extern "C" void exit (int) throw ();' \
- 'extern "C" void exit (int);' \
- 'void exit (int);'
-do
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-$ac_declaration
-#include <stdlib.h>
-int
-main ()
-{
-exit (42);
- ;
- return 0;
-}
-_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_cxx_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
- :
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-continue
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- ac_status=$?
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-
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-
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-#endif
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-{
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- fi
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-
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-
-
-
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-
-
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-
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-ac_ct_RANLIB=$ac_cv_prog_ac_ct_RANLIB
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-echo "${ECHO_T}no" >&6
-fi
-
- RANLIB=$ac_ct_RANLIB
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- RANLIB="$ac_cv_prog_RANLIB"
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-
-# Find a good install program. We prefer a C program (faster),
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-# IRIX /sbin/install
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- /etc/* | /usr/sbin/* | /usr/etc/* | /sbin/* | /usr/afsws/bin/* | \
- ?:\\/os2\\/install\\/* | ?:\\/OS2\\/INSTALL\\/* | \
- /usr/ucb/* ) ;;
- *)
- # OSF1 and SCO ODT 3.0 have their own names for install.
- # Don't use installbsd from OSF since it installs stuff as root
- # by default.
- for ac_prog in ginstall scoinst install; do
- for ac_exec_ext in '' $ac_executable_extensions; do
- if $as_executable_p "$as_dir/$ac_prog$ac_exec_ext"; then
- if test $ac_prog = install &&
- grep dspmsg "$as_dir/$ac_prog$ac_exec_ext" >/dev/null 2>&1; then
- # AIX install. It has an incompatible calling convention.
- :
- elif test $ac_prog = install &&
- grep pwplus "$as_dir/$ac_prog$ac_exec_ext" >/dev/null 2>&1; then
- # program-specific install script used by HP pwplus--don't use.
- :
- else
- ac_cv_path_install="$as_dir/$ac_prog$ac_exec_ext -c"
- break 3
- fi
- fi
- done
- done
- ;;
-esac
-done
-
-
-fi
- if test "${ac_cv_path_install+set}" = set; then
- INSTALL=$ac_cv_path_install
- else
- # As a last resort, use the slow shell script. We don't cache a
- # path for INSTALL within a source directory, because that will
- # break other packages using the cache if that directory is
- # removed, or if the path is relative.
- INSTALL=$ac_install_sh
- fi
-fi
-echo "$as_me:$LINENO: result: $INSTALL" >&5
-echo "${ECHO_T}$INSTALL" >&6
-
-# Use test -z because SunOS4 sh mishandles braces in ${var-val}.
-# It thinks the first close brace ends the variable substitution.
-test -z "$INSTALL_PROGRAM" && INSTALL_PROGRAM='${INSTALL}'
-
-test -z "$INSTALL_SCRIPT" && INSTALL_SCRIPT='${INSTALL}'
-
-test -z "$INSTALL_DATA" && INSTALL_DATA='${INSTALL} -m 644'
-
-
-
-
-
- if test -n "$PYTHON"; then
- # If the user set $PYTHON, use it and don't search something else.
- echo "$as_me:$LINENO: checking whether $PYTHON version >= 2.4" >&5
-echo $ECHO_N "checking whether $PYTHON version >= 2.4... $ECHO_C" >&6
- prog="import sys, string
-# split strings by '.' and convert to numeric. Append some zeros
-# because we need at least 4 digits for the hex conversion.
-minver = map(int, string.split('2.4', '.')) + [0, 0, 0]
-minverhex = 0
-for i in xrange(0, 4): minverhex = (minverhex << 8) + minver[i]
-sys.exit(sys.hexversion < minverhex)"
- if { echo "$as_me:$LINENO: $PYTHON -c "$prog"" >&5
- ($PYTHON -c "$prog") >&5 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; then
- echo "$as_me:$LINENO: result: yes" >&5
-echo "${ECHO_T}yes" >&6
-else
- { { echo "$as_me:$LINENO: error: too old" >&5
-echo "$as_me: error: too old" >&2;}
- { (exit 1); exit 1; }; }
-fi
-
- am_display_PYTHON=$PYTHON
- else
- # Otherwise, try each interpreter until we find one that satisfies
- # VERSION.
- echo "$as_me:$LINENO: checking for a Python interpreter with version >= 2.4" >&5
-echo $ECHO_N "checking for a Python interpreter with version >= 2.4... $ECHO_C" >&6
-if test "${am_cv_pathless_PYTHON+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
-
- for am_cv_pathless_PYTHON in python python2 python2.5 python2.4 python2.3 python2.2 python2.1 python2.0 python1.6 python1.5 none; do
- test "$am_cv_pathless_PYTHON" = none && break
- prog="import sys, string
-# split strings by '.' and convert to numeric. Append some zeros
-# because we need at least 4 digits for the hex conversion.
-minver = map(int, string.split('2.4', '.')) + [0, 0, 0]
-minverhex = 0
-for i in xrange(0, 4): minverhex = (minverhex << 8) + minver[i]
-sys.exit(sys.hexversion < minverhex)"
- if { echo "$as_me:$LINENO: $am_cv_pathless_PYTHON -c "$prog"" >&5
- ($am_cv_pathless_PYTHON -c "$prog") >&5 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; then
- break
-fi
-
- done
-fi
-echo "$as_me:$LINENO: result: $am_cv_pathless_PYTHON" >&5
-echo "${ECHO_T}$am_cv_pathless_PYTHON" >&6
- # Set $PYTHON to the absolute path of $am_cv_pathless_PYTHON.
- if test "$am_cv_pathless_PYTHON" = none; then
- PYTHON=:
- else
- # Extract the first word of "$am_cv_pathless_PYTHON", so it can be a program name with args.
-set dummy $am_cv_pathless_PYTHON; ac_word=$2
-echo "$as_me:$LINENO: checking for $ac_word" >&5
-echo $ECHO_N "checking for $ac_word... $ECHO_C" >&6
-if test "${ac_cv_path_PYTHON+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- case $PYTHON in
- [\\/]* | ?:[\\/]*)
- ac_cv_path_PYTHON="$PYTHON" # Let the user override the test with a path.
- ;;
- *)
- as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
-for as_dir in $PATH
-do
- IFS=$as_save_IFS
- test -z "$as_dir" && as_dir=.
- for ac_exec_ext in '' $ac_executable_extensions; do
- if $as_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
- ac_cv_path_PYTHON="$as_dir/$ac_word$ac_exec_ext"
- echo "$as_me:$LINENO: found $as_dir/$ac_word$ac_exec_ext" >&5
- break 2
- fi
-done
-done
-
- ;;
-esac
-fi
-PYTHON=$ac_cv_path_PYTHON
-
-if test -n "$PYTHON"; then
- echo "$as_me:$LINENO: result: $PYTHON" >&5
-echo "${ECHO_T}$PYTHON" >&6
-else
- echo "$as_me:$LINENO: result: no" >&5
-echo "${ECHO_T}no" >&6
-fi
-
- fi
- am_display_PYTHON=$am_cv_pathless_PYTHON
- fi
-
-
- if test "$PYTHON" = :; then
- { { echo "$as_me:$LINENO: error: no suitable Python interpreter found" >&5
-echo "$as_me: error: no suitable Python interpreter found" >&2;}
- { (exit 1); exit 1; }; }
- else
-
-
- echo "$as_me:$LINENO: checking for $am_display_PYTHON version" >&5
-echo $ECHO_N "checking for $am_display_PYTHON version... $ECHO_C" >&6
-if test "${am_cv_python_version+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- am_cv_python_version=`$PYTHON -c "import sys; print sys.version[:3]"`
-fi
-echo "$as_me:$LINENO: result: $am_cv_python_version" >&5
-echo "${ECHO_T}$am_cv_python_version" >&6
- PYTHON_VERSION=$am_cv_python_version
-
-
-
- PYTHON_PREFIX='${prefix}'
-
- PYTHON_EXEC_PREFIX='${exec_prefix}'
-
-
-
- echo "$as_me:$LINENO: checking for $am_display_PYTHON platform" >&5
-echo $ECHO_N "checking for $am_display_PYTHON platform... $ECHO_C" >&6
-if test "${am_cv_python_platform+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- am_cv_python_platform=`$PYTHON -c "import sys; print sys.platform"`
-fi
-echo "$as_me:$LINENO: result: $am_cv_python_platform" >&5
-echo "${ECHO_T}$am_cv_python_platform" >&6
- PYTHON_PLATFORM=$am_cv_python_platform
-
-
-
-
- echo "$as_me:$LINENO: checking for $am_display_PYTHON script directory" >&5
-echo $ECHO_N "checking for $am_display_PYTHON script directory... $ECHO_C" >&6
-if test "${am_cv_python_pythondir+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- am_cv_python_pythondir=`$PYTHON -c "from distutils import sysconfig; print sysconfig.get_python_lib(0,0,prefix='$PYTHON_PREFIX')" 2>/dev/null ||
- echo "$PYTHON_PREFIX/lib/python$PYTHON_VERSION/site-packages"`
-fi
-echo "$as_me:$LINENO: result: $am_cv_python_pythondir" >&5
-echo "${ECHO_T}$am_cv_python_pythondir" >&6
- pythondir=$am_cv_python_pythondir
-
-
-
- pkgpythondir=\${pythondir}/$PACKAGE
-
-
- echo "$as_me:$LINENO: checking for $am_display_PYTHON extension module directory" >&5
-echo $ECHO_N "checking for $am_display_PYTHON extension module directory... $ECHO_C" >&6
-if test "${am_cv_python_pyexecdir+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- am_cv_python_pyexecdir=`$PYTHON -c "from distutils import sysconfig; print sysconfig.get_python_lib(1,0,prefix='$PYTHON_EXEC_PREFIX')" 2>/dev/null ||
- echo "${PYTHON_EXEC_PREFIX}/lib/python${PYTHON_VERSION}/site-packages"`
-fi
-echo "$as_me:$LINENO: result: $am_cv_python_pyexecdir" >&5
-echo "${ECHO_T}$am_cv_python_pyexecdir" >&6
- pyexecdir=$am_cv_python_pyexecdir
-
-
-
- pkgpyexecdir=\${pyexecdir}/$PACKAGE
-
-
-
- fi
-
-
-
-
-
-# Check whether --with-boost or --without-boost was given.
-if test "${with_boost+set}" = set; then
- withval="$with_boost"
-
- if test "$withval" = "no"; then
- want_boost="no"
- elif test "$withval" = "yes"; then
- want_boost="yes"
- ac_boost_path=""
- else
- want_boost="yes"
- ac_boost_path="$withval"
- fi
-
-else
- want_boost="yes"
-fi;
-
-
-
-# Check whether --with-boost-libdir or --without-boost-libdir was given.
-if test "${with_boost_libdir+set}" = set; then
- withval="$with_boost_libdir"
-
- if test -d $withval
- then
- ac_boost_lib_path="$withval"
- else
- { { echo "$as_me:$LINENO: error: --with-boost-libdir expected directory name" >&5
-echo "$as_me: error: --with-boost-libdir expected directory name" >&2;}
- { (exit 1); exit 1; }; }
- fi
-
-else
- ac_boost_lib_path=""
-
-fi;
-
-if test "x$want_boost" = "xyes"; then
- boost_lib_version_req=1.38.0
- boost_lib_version_req_shorten=`expr $boost_lib_version_req : '\([0-9]*\.[0-9]*\)'`
- boost_lib_version_req_major=`expr $boost_lib_version_req : '\([0-9]*\)'`
- boost_lib_version_req_minor=`expr $boost_lib_version_req : '[0-9]*\.\([0-9]*\)'`
- boost_lib_version_req_sub_minor=`expr $boost_lib_version_req : '[0-9]*\.[0-9]*\.\([0-9]*\)'`
- if test "x$boost_lib_version_req_sub_minor" = "x" ; then
- boost_lib_version_req_sub_minor="0"
- fi
- WANT_BOOST_VERSION=`expr $boost_lib_version_req_major \* 100000 \+ $boost_lib_version_req_minor \* 100 \+ $boost_lib_version_req_sub_minor`
- echo "$as_me:$LINENO: checking for boostlib >= $boost_lib_version_req" >&5
-echo $ECHO_N "checking for boostlib >= $boost_lib_version_req... $ECHO_C" >&6
- succeeded=no
-
- if test "$ac_boost_path" != ""; then
- BOOST_LDFLAGS="-L$ac_boost_path/lib"
- BOOST_CPPFLAGS="-I$ac_boost_path/include"
- else
- for ac_boost_path_tmp in /usr /usr/local /opt /opt/local ; do
- if test -d "$ac_boost_path_tmp/include/boost" && test -r "$ac_boost_path_tmp/include/boost"; then
- BOOST_LDFLAGS="-L$ac_boost_path_tmp/lib"
- BOOST_CPPFLAGS="-I$ac_boost_path_tmp/include"
- break;
- fi
- done
- fi
-
- if test "$ac_boost_lib_path" != ""; then
- BOOST_LDFLAGS="-L$ac_boost_lib_path"
- fi
-
- CPPFLAGS_SAVED="$CPPFLAGS"
- CPPFLAGS="$CPPFLAGS $BOOST_CPPFLAGS"
- export CPPFLAGS
-
- LDFLAGS_SAVED="$LDFLAGS"
- LDFLAGS="$LDFLAGS $BOOST_LDFLAGS"
- export LDFLAGS
-
- ac_ext=cc
-ac_cpp='$CXXCPP $CPPFLAGS'
-ac_compile='$CXX -c $CXXFLAGS $CPPFLAGS conftest.$ac_ext >&5'
-ac_link='$CXX -o conftest$ac_exeext $CXXFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5'
-ac_compiler_gnu=$ac_cv_cxx_compiler_gnu
-
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-
- #include <boost/version.hpp>
-
-int
-main ()
-{
-
- #if BOOST_VERSION >= $WANT_BOOST_VERSION
- // Everything is okay
- #else
- # error Boost version is too old
- #endif
-
- ;
- return 0;
-}
-_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_cxx_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
-
- echo "$as_me:$LINENO: result: yes" >&5
-echo "${ECHO_T}yes" >&6
- succeeded=yes
- found_system=yes
-
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-
-
-fi
-rm -f conftest.err conftest.$ac_objext conftest.$ac_ext
- ac_ext=c
-ac_cpp='$CPP $CPPFLAGS'
-ac_compile='$CC -c $CFLAGS $CPPFLAGS conftest.$ac_ext >&5'
-ac_link='$CC -o conftest$ac_exeext $CFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5'
-ac_compiler_gnu=$ac_cv_c_compiler_gnu
-
-
-
-
- if test "x$succeeded" != "xyes"; then
- _version=0
- if test "$ac_boost_path" != ""; then
- if test -d "$ac_boost_path" && test -r "$ac_boost_path"; then
- for i in `ls -d $ac_boost_path/include/boost-* 2>/dev/null`; do
- _version_tmp=`echo $i | sed "s#$ac_boost_path##" | sed 's/\/include\/boost-//' | sed 's/_/./'`
- V_CHECK=`expr $_version_tmp \> $_version`
- if test "$V_CHECK" = "1" ; then
- _version=$_version_tmp
- fi
- VERSION_UNDERSCORE=`echo $_version | sed 's/\./_/'`
- BOOST_CPPFLAGS="-I$ac_boost_path/include/boost-$VERSION_UNDERSCORE"
- done
- fi
- else
- for ac_boost_path in /usr /usr/local /opt /opt/local ; do
- if test -d "$ac_boost_path" && test -r "$ac_boost_path"; then
- for i in `ls -d $ac_boost_path/include/boost-* 2>/dev/null`; do
- _version_tmp=`echo $i | sed "s#$ac_boost_path##" | sed 's/\/include\/boost-//' | sed 's/_/./'`
- V_CHECK=`expr $_version_tmp \> $_version`
- if test "$V_CHECK" = "1" ; then
- _version=$_version_tmp
- best_path=$ac_boost_path
- fi
- done
- fi
- done
-
- VERSION_UNDERSCORE=`echo $_version | sed 's/\./_/'`
- BOOST_CPPFLAGS="-I$best_path/include/boost-$VERSION_UNDERSCORE"
- if test "$ac_boost_lib_path" = ""
- then
- BOOST_LDFLAGS="-L$best_path/lib"
- fi
-
- if test "x$BOOST_ROOT" != "x"; then
- if test -d "$BOOST_ROOT" && test -r "$BOOST_ROOT" && test -d "$BOOST_ROOT/stage/lib" && test -r "$BOOST_ROOT/stage/lib"; then
- version_dir=`expr //$BOOST_ROOT : '.*/\(.*\)'`
- stage_version=`echo $version_dir | sed 's/boost_//' | sed 's/_/./g'`
- stage_version_shorten=`expr $stage_version : '\([0-9]*\.[0-9]*\)'`
- V_CHECK=`expr $stage_version_shorten \>\= $_version`
- if test "$V_CHECK" = "1" -a "$ac_boost_lib_path" = "" ; then
- { echo "$as_me:$LINENO: We will use a staged boost library from $BOOST_ROOT" >&5
-echo "$as_me: We will use a staged boost library from $BOOST_ROOT" >&6;}
- BOOST_CPPFLAGS="-I$BOOST_ROOT"
- BOOST_LDFLAGS="-L$BOOST_ROOT/stage/lib"
- fi
- fi
- fi
- fi
-
- CPPFLAGS="$CPPFLAGS $BOOST_CPPFLAGS"
- export CPPFLAGS
- LDFLAGS="$LDFLAGS $BOOST_LDFLAGS"
- export LDFLAGS
-
- ac_ext=cc
-ac_cpp='$CXXCPP $CPPFLAGS'
-ac_compile='$CXX -c $CXXFLAGS $CPPFLAGS conftest.$ac_ext >&5'
-ac_link='$CXX -o conftest$ac_exeext $CXXFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5'
-ac_compiler_gnu=$ac_cv_cxx_compiler_gnu
-
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-
- #include <boost/version.hpp>
-
-int
-main ()
-{
-
- #if BOOST_VERSION >= $WANT_BOOST_VERSION
- // Everything is okay
- #else
- # error Boost version is too old
- #endif
-
- ;
- return 0;
-}
-_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_cxx_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
-
- echo "$as_me:$LINENO: result: yes" >&5
-echo "${ECHO_T}yes" >&6
- succeeded=yes
- found_system=yes
-
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-
-
-fi
-rm -f conftest.err conftest.$ac_objext conftest.$ac_ext
- ac_ext=c
-ac_cpp='$CPP $CPPFLAGS'
-ac_compile='$CC -c $CFLAGS $CPPFLAGS conftest.$ac_ext >&5'
-ac_link='$CC -o conftest$ac_exeext $CFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5'
-ac_compiler_gnu=$ac_cv_c_compiler_gnu
-
- fi
-
- if test "$succeeded" != "yes" ; then
- if test "$_version" = "0" ; then
- { { echo "$as_me:$LINENO: error: We could not detect the boost libraries (version $boost_lib_version_req_shorten or higher). If you have a staged boost library (still not installed) please specify \$BOOST_ROOT in your environment and do not give a PATH to --with-boost option. If you are sure you have boost installed, then check your version number looking in <boost/version.hpp>. See http://randspringer.de/boost for more documentation." >&5
-echo "$as_me: error: We could not detect the boost libraries (version $boost_lib_version_req_shorten or higher). If you have a staged boost library (still not installed) please specify \$BOOST_ROOT in your environment and do not give a PATH to --with-boost option. If you are sure you have boost installed, then check your version number looking in <boost/version.hpp>. See http://randspringer.de/boost for more documentation." >&2;}
- { (exit 1); exit 1; }; }
- else
- { echo "$as_me:$LINENO: Your boost libraries seems to old (version $_version)." >&5
-echo "$as_me: Your boost libraries seems to old (version $_version)." >&6;}
- fi
- else
-
-
-
-cat >>confdefs.h <<\_ACEOF
-#define HAVE_BOOST
-_ACEOF
-
- fi
-
- CPPFLAGS="$CPPFLAGS_SAVED"
- LDFLAGS="$LDFLAGS_SAVED"
-fi
-
-
-
-
-# Check whether --with-bam or --without-bam was given.
-if test "${with_bam+set}" = set; then
- withval="$with_bam"
-
- if test "$withval" = "no"; then
- want_bam="no"
- elif test "$withval" = "yes"; then
- want_bam="yes"
- ac_bam_path=""
- else
- want_bam="yes"
- ac_bam_path="$withval"
- fi
-
-else
- want_bam="yes"
-fi;
-
-
-
-# Check whether --with-bam-libdir or --without-bam-libdir was given.
-if test "${with_bam_libdir+set}" = set; then
- withval="$with_bam_libdir"
-
- if test -d $withval
- then
- ac_bam_lib_path="$withval"
- else
- { { echo "$as_me:$LINENO: error: --with-bam-libdir expected directory name" >&5
-echo "$as_me: error: --with-bam-libdir expected directory name" >&2;}
- { (exit 1); exit 1; }; }
- fi
-
-else
- ac_bam_lib_path=""
-
-fi;
-
-if test "x$want_bam" = "xyes"; then
-# bam_lib_version_req=ifelse([], ,1.20.0,)
-# bam_lib_version_req_shorten=`expr $bam_lib_version_req : '\([[0-9]]*\.[[0-9]]*\)'`
-# bam_lib_version_req_major=`expr $bam_lib_version_req : '\([[0-9]]*\)'`
-# bam_lib_version_req_minor=`expr $bam_lib_version_req : '[[0-9]]*\.\([[0-9]]*\)'`
-# bam_lib_version_req_sub_minor=`expr $bam_lib_version_req : '[[0-9]]*\.[[0-9]]*\.\([[0-9]]*\)'`
-# if test "x$bam_lib_version_req_sub_minor" = "x" ; then
-# bam_lib_version_req_sub_minor="0"
-# fi
-# WANT_BAM_VERSION=`expr $bam_lib_version_req_major \* 100000 \+ $bam_lib_version_req_minor \* 100 \+ $bam_lib_version_req_sub_minor`
- echo "$as_me:$LINENO: checking for bamlib" >&5
-echo $ECHO_N "checking for bamlib... $ECHO_C" >&6
- succeeded=no
-
- if test "$ac_bam_path" != ""; then
- BAM_LDFLAGS="-L$ac_bam_path/lib"
- BAM_CPPFLAGS="-I$ac_bam_path/include"
- else
- for ac_bam_path_tmp in /usr /usr/local /opt /opt/local ; do
- if test -d "$ac_bam_path_tmp/include/bam" && test -r "$ac_bam_path_tmp/include/bam"; then
- BAM_LDFLAGS="-L$ac_bam_path_tmp/lib"
- BAM_CPPFLAGS="-I$ac_bam_path_tmp/include"
- break;
- fi
- done
- fi
-
- if test "$ac_bam_lib_path" != ""; then
- BAM_LDFLAGS="-L$ac_bam_lib_path"
- fi
-
- CPPFLAGS_SAVED="$CPPFLAGS"
- CPPFLAGS="$CPPFLAGS $BAM_CPPFLAGS"
- export CPPFLAGS
-
- LDFLAGS_SAVED="$LDFLAGS"
- LDFLAGS="$LDFLAGS $BAM_LDFLAGS"
- export LDFLAGS
-
- ac_ext=cc
-ac_cpp='$CXXCPP $CPPFLAGS'
-ac_compile='$CXX -c $CXXFLAGS $CPPFLAGS conftest.$ac_ext >&5'
-ac_link='$CXX -o conftest$ac_exeext $CXXFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5'
-ac_compiler_gnu=$ac_cv_cxx_compiler_gnu
-
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-
-<<<<<<< HEAD
- #include <bam/bam.h>
-=======
- #include <samtools/bam.h>
->>>>>>> fedd24b9bf5c659622fa3386243a60f6197a83ac
-
-int
-main ()
-{
-
-
- ;
- return 0;
-}
-_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_cxx_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
-
- echo "$as_me:$LINENO: result: yes" >&5
-echo "${ECHO_T}yes" >&6
- succeeded=yes
- found_system=yes
-
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-
-
-fi
-rm -f conftest.err conftest.$ac_objext conftest.$ac_ext
- ac_ext=c
-ac_cpp='$CPP $CPPFLAGS'
-ac_compile='$CC -c $CFLAGS $CPPFLAGS conftest.$ac_ext >&5'
-ac_link='$CC -o conftest$ac_exeext $CFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5'
-ac_compiler_gnu=$ac_cv_c_compiler_gnu
-
-
- if test "x$succeeded" != "xyes"; then
- _version=0
- if test "$ac_bam_path" != ""; then
- if test -d "$ac_bam_path" && test -r "$ac_bam_path"; then
- for i in `ls -d $ac_bam_path/include/bam-* 2>/dev/null`; do
- _version_tmp=`echo $i | sed "s#$ac_bam_path##" | sed 's/\/include\/bam-//' | sed 's/_/./'`
- V_CHECK=`expr $_version_tmp \> $_version`
- if test "$V_CHECK" = "1" ; then
- _version=$_version_tmp
- fi
- VERSION_UNDERSCORE=`echo $_version | sed 's/\./_/'`
- BAM_CPPFLAGS="-I$ac_bam_path/include/bam-$VERSION_UNDERSCORE"
- done
- fi
- else
- for ac_bam_path in /usr /usr/local /opt /opt/local ; do
- if test -d "$ac_bam_path" && test -r "$ac_bam_path"; then
- for i in `ls -d $ac_bam_path/include/bam-* 2>/dev/null`; do
- _version_tmp=`echo $i | sed "s#$ac_bam_path##" | sed 's/\/include\/bam-//' | sed 's/_/./'`
- V_CHECK=`expr $_version_tmp \> $_version`
- if test "$V_CHECK" = "1" ; then
- _version=$_version_tmp
- best_path=$ac_bam_path
- fi
- done
- fi
- done
-
- VERSION_UNDERSCORE=`echo $_version | sed 's/\./_/'`
- BAM_CPPFLAGS="-I$best_path/include/bam-$VERSION_UNDERSCORE"
- if test "$ac_bam_lib_path" = ""
- then
- BAM_LDFLAGS="-L$best_path/lib"
- fi
-
- if test "x$BAM_ROOT" != "x"; then
- if test -d "$BAM_ROOT" && test -r "$BAM_ROOT" && test -d "$BAM_ROOT/stage/lib" && test -r "$BAM_ROOT/stage/lib"; then
- version_dir=`expr //$BAM_ROOT : '.*/\(.*\)'`
- stage_version=`echo $version_dir | sed 's/bam_//' | sed 's/_/./g'`
- stage_version_shorten=`expr $stage_version : '\([0-9]*\.[0-9]*\)'`
- V_CHECK=`expr $stage_version_shorten \>\= $_version`
- if test "$V_CHECK" = "1" -a "$ac_bam_lib_path" = "" ; then
- { echo "$as_me:$LINENO: We will use a staged bam library from $BAM_ROOT" >&5
-echo "$as_me: We will use a staged bam library from $BAM_ROOT" >&6;}
- BAM_CPPFLAGS="-I$BAM_ROOT"
- BAM_LDFLAGS="-L$BAM_ROOT/stage/lib"
- fi
- fi
- fi
- fi
-
- CPPFLAGS="$CPPFLAGS $BAM_CPPFLAGS"
- export CPPFLAGS
- LDFLAGS="$LDFLAGS $BAM_LDFLAGS"
- export LDFLAGS
-
- ac_ext=cc
-ac_cpp='$CXXCPP $CPPFLAGS'
-ac_compile='$CXX -c $CXXFLAGS $CPPFLAGS conftest.$ac_ext >&5'
-ac_link='$CXX -o conftest$ac_exeext $CXXFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5'
-ac_compiler_gnu=$ac_cv_cxx_compiler_gnu
-
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-
- #include <bam/version.hpp>
-
-int
-main ()
-{
-
-
- ;
- return 0;
-}
-_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_cxx_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
-
- echo "$as_me:$LINENO: result: yes" >&5
-echo "${ECHO_T}yes" >&6
- succeeded=yes
- found_system=yes
-
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-
-
-fi
-rm -f conftest.err conftest.$ac_objext conftest.$ac_ext
- ac_ext=c
-ac_cpp='$CPP $CPPFLAGS'
-ac_compile='$CC -c $CFLAGS $CPPFLAGS conftest.$ac_ext >&5'
-ac_link='$CC -o conftest$ac_exeext $CFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5'
-ac_compiler_gnu=$ac_cv_c_compiler_gnu
-
- fi
-
- if test "$succeeded" != "yes" ; then
- if test "$_version" = "0" ; then
- { { echo "$as_me:$LINENO: error: We could not detect the bam libraries (version $bam_lib_version_req_shorten or higher). If you have a staged bam library (still not installed) please specify \$BAM_ROOT in your environment and do not give a PATH to --with-bam option. If you are sure you have bam installed, then check your version number looking in <bam/version.hpp>. See http://randspringer.de/bam for more documentation." >&5
-echo "$as_me: error: We could not detect the bam libraries (version $bam_lib_version_req_shorten or higher). If you have a staged bam library (still not installed) please specify \$BAM_ROOT in your environment and do not give a PATH to --with-bam option. If you are sure you have bam installed, then check your version number looking in <bam/version.hpp>. See http://randspringer.de/bam for more documentation." >&2;}
- { (exit 1); exit 1; }; }
- else
- { echo "$as_me:$LINENO: Your bam libraries seem too old (version $_version)." >&5
-echo "$as_me: Your bam libraries seem too old (version $_version)." >&6;}
- fi
- else
- BAM_LIB="-lbam"
-
-
-
-
-cat >>confdefs.h <<\_ACEOF
-#define HAVE_BAM
-_ACEOF
-
- fi
-
- CPPFLAGS="$CPPFLAGS_SAVED"
- LDFLAGS="$LDFLAGS_SAVED"
-fi
-
-
-# Make sure we can run config.sub.
-$ac_config_sub sun4 >/dev/null 2>&1 ||
- { { echo "$as_me:$LINENO: error: cannot run $ac_config_sub" >&5
-echo "$as_me: error: cannot run $ac_config_sub" >&2;}
- { (exit 1); exit 1; }; }
-
-echo "$as_me:$LINENO: checking build system type" >&5
-echo $ECHO_N "checking build system type... $ECHO_C" >&6
-if test "${ac_cv_build+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- ac_cv_build_alias=$build_alias
-test -z "$ac_cv_build_alias" &&
- ac_cv_build_alias=`$ac_config_guess`
-test -z "$ac_cv_build_alias" &&
- { { echo "$as_me:$LINENO: error: cannot guess build type; you must specify one" >&5
-echo "$as_me: error: cannot guess build type; you must specify one" >&2;}
- { (exit 1); exit 1; }; }
-ac_cv_build=`$ac_config_sub $ac_cv_build_alias` ||
- { { echo "$as_me:$LINENO: error: $ac_config_sub $ac_cv_build_alias failed" >&5
-echo "$as_me: error: $ac_config_sub $ac_cv_build_alias failed" >&2;}
- { (exit 1); exit 1; }; }
-
-fi
-echo "$as_me:$LINENO: result: $ac_cv_build" >&5
-echo "${ECHO_T}$ac_cv_build" >&6
-build=$ac_cv_build
-build_cpu=`echo $ac_cv_build | sed 's/^\([^-]*\)-\([^-]*\)-\(.*\)$/\1/'`
-build_vendor=`echo $ac_cv_build | sed 's/^\([^-]*\)-\([^-]*\)-\(.*\)$/\2/'`
-build_os=`echo $ac_cv_build | sed 's/^\([^-]*\)-\([^-]*\)-\(.*\)$/\3/'`
-
-
-
-
-
-# Check whether --with-boost-thread or --without-boost-thread was given.
-if test "${with_boost_thread+set}" = set; then
- withval="$with_boost_thread"
-
- if test "$withval" = "no"; then
- want_boost="no"
- elif test "$withval" = "yes"; then
- want_boost="yes"
- ax_boost_user_thread_lib=""
- else
- want_boost="yes"
- echo "using $withval"
- ax_boost_user_thread_lib="$withval"
- fi
-
-else
- want_boost="yes"
-
-fi;
-
- if test "x$want_boost" = "xyes"; then
-
-
- CPPFLAGS_SAVED="$CPPFLAGS"
- CPPFLAGS="$CPPFLAGS $BOOST_CPPFLAGS"
- export CPPFLAGS
-
- LDFLAGS_SAVED="$LDFLAGS"
- LDFLAGS="$LDFLAGS $BOOST_LDFLAGS"
- export LDFLAGS
-
- echo "$as_me:$LINENO: checking whether the Boost::Thread library is available" >&5
-echo $ECHO_N "checking whether the Boost::Thread library is available... $ECHO_C" >&6
-if test "${ax_cv_boost_thread+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- ac_ext=cc
-ac_cpp='$CXXCPP $CPPFLAGS'
-ac_compile='$CXX -c $CXXFLAGS $CPPFLAGS conftest.$ac_ext >&5'
-ac_link='$CXX -o conftest$ac_exeext $CXXFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5'
-ac_compiler_gnu=$ac_cv_cxx_compiler_gnu
-
- CXXFLAGS_SAVE=$CXXFLAGS
-
- if test "x$build_os" = "xsolaris" ; then
- CXXFLAGS="-pthreads $CXXFLAGS"
- elif test "x$build_os" = "xming32" ; then
- CXXFLAGS="-mthreads $CXXFLAGS"
- else
- CXXFLAGS="-pthread $CXXFLAGS"
- fi
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-#include <boost/thread/thread.hpp>
-int
-main ()
-{
-boost::thread_group thrds;
- return 0;
- ;
- return 0;
-}
-_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_cxx_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
- ax_cv_boost_thread=yes
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-ax_cv_boost_thread=no
-fi
-rm -f conftest.err conftest.$ac_objext conftest.$ac_ext
- CXXFLAGS=$CXXFLAGS_SAVE
- ac_ext=c
-ac_cpp='$CPP $CPPFLAGS'
-ac_compile='$CC -c $CFLAGS $CPPFLAGS conftest.$ac_ext >&5'
-ac_link='$CC -o conftest$ac_exeext $CFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5'
-ac_compiler_gnu=$ac_cv_c_compiler_gnu
-
-
-fi
-echo "$as_me:$LINENO: result: $ax_cv_boost_thread" >&5
-echo "${ECHO_T}$ax_cv_boost_thread" >&6
- if test "x$ax_cv_boost_thread" = "xyes"; then
- if test "x$build_os" = "xsolaris" ; then
- BOOST_CPPFLAGS="-pthreads $BOOST_CPPFLAGS"
- elif test "x$build_os" = "xming32" ; then
- BOOST_CPPFLAGS="-mthreads $BOOST_CPPFLAGS"
- else
- BOOST_CPPFLAGS="-pthread $BOOST_CPPFLAGS"
- fi
-
-
-
-
-cat >>confdefs.h <<\_ACEOF
-#define HAVE_BOOST_THREAD
-_ACEOF
-
- BOOSTLIBDIR=`echo $BOOST_LDFLAGS | sed -e 's/[^\/]*//'`
-
- LDFLAGS_SAVE=$LDFLAGS
- case "x$build_os" in
- *bsd* )
- LDFLAGS="-pthread $LDFLAGS"
- break;
- ;;
- esac
- if test "x$ax_boost_user_thread_lib" = "x"; then
- for libextension in `ls $BOOSTLIBDIR/libboost_thread*.so* 2>/dev/null | sed 's,.*/,,' | sed -e 's;^lib\(boost_thread.*\)\.so.*$;\1;'` `ls $BOOSTLIBDIR/libboost_thread*.a* 2>/dev/null | sed 's,.*/,,' | sed -e 's;^lib\(boost_thread.*\)\.a*$;\1;'`; do
- ax_lib=${libextension}
- as_ac_Lib=`echo "ac_cv_lib_$ax_lib''_exit" | $as_tr_sh`
-echo "$as_me:$LINENO: checking for exit in -l$ax_lib" >&5
-echo $ECHO_N "checking for exit in -l$ax_lib... $ECHO_C" >&6
-if eval "test \"\${$as_ac_Lib+set}\" = set"; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- ac_check_lib_save_LIBS=$LIBS
-LIBS="-l$ax_lib $LIBS"
-cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-
-/* Override any gcc2 internal prototype to avoid an error. */
-#ifdef __cplusplus
-extern "C"
-#endif
-/* We use char because int might match the return type of a gcc2
- builtin and then its argument prototype would still apply. */
-char exit ();
-int
-main ()
-{
-exit ();
- ;
- return 0;
-}
-_ACEOF
-rm -f conftest.$ac_objext conftest$ac_exeext
-if { (eval echo "$as_me:$LINENO: \"$ac_link\"") >&5
- (eval $ac_link) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_c_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest$ac_exeext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
- eval "$as_ac_Lib=yes"
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-eval "$as_ac_Lib=no"
-fi
-rm -f conftest.err conftest.$ac_objext \
- conftest$ac_exeext conftest.$ac_ext
-LIBS=$ac_check_lib_save_LIBS
-fi
-echo "$as_me:$LINENO: result: `eval echo '${'$as_ac_Lib'}'`" >&5
-echo "${ECHO_T}`eval echo '${'$as_ac_Lib'}'`" >&6
-if test `eval echo '${'$as_ac_Lib'}'` = yes; then
- BOOST_THREAD_LIB="-l$ax_lib"; link_thread="yes"; break
-else
- link_thread="no"
-fi
-
- done
- if test "x$link_thread" != "xyes"; then
- for libextension in `ls $BOOSTLIBDIR/boost_thread*.dll* 2>/dev/null | sed 's,.*/,,' | sed -e 's;^\(boost_thread.*\)\.dll.*$;\1;'` `ls $BOOSTLIBDIR/boost_thread*.a* 2>/dev/null | sed 's,.*/,,' | sed -e 's;^\(boost_thread.*\)\.a*$;\1;'` ; do
- ax_lib=${libextension}
- as_ac_Lib=`echo "ac_cv_lib_$ax_lib''_exit" | $as_tr_sh`
-echo "$as_me:$LINENO: checking for exit in -l$ax_lib" >&5
-echo $ECHO_N "checking for exit in -l$ax_lib... $ECHO_C" >&6
-if eval "test \"\${$as_ac_Lib+set}\" = set"; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- ac_check_lib_save_LIBS=$LIBS
-LIBS="-l$ax_lib $LIBS"
-cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-
-/* Override any gcc2 internal prototype to avoid an error. */
-#ifdef __cplusplus
-extern "C"
-#endif
-/* We use char because int might match the return type of a gcc2
- builtin and then its argument prototype would still apply. */
-char exit ();
-int
-main ()
-{
-exit ();
- ;
- return 0;
-}
-_ACEOF
-rm -f conftest.$ac_objext conftest$ac_exeext
-if { (eval echo "$as_me:$LINENO: \"$ac_link\"") >&5
- (eval $ac_link) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_c_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest$ac_exeext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
- eval "$as_ac_Lib=yes"
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-eval "$as_ac_Lib=no"
-fi
-rm -f conftest.err conftest.$ac_objext \
- conftest$ac_exeext conftest.$ac_ext
-LIBS=$ac_check_lib_save_LIBS
-fi
-echo "$as_me:$LINENO: result: `eval echo '${'$as_ac_Lib'}'`" >&5
-echo "${ECHO_T}`eval echo '${'$as_ac_Lib'}'`" >&6
-if test `eval echo '${'$as_ac_Lib'}'` = yes; then
- BOOST_THREAD_LIB="-l$ax_lib"; link_thread="yes"; break
-else
- link_thread="no"
-fi
-
- done
- fi
-
- else
- BOOST_THREAD_LIB="$ax_boost_user_thread_lib";
-
- link_thread="yes";
-
-
- fi
- if test "x$link_thread" = "xno"; then
- { { echo "$as_me:$LINENO: error: Could not link against $ax_lib !" >&5
-echo "$as_me: error: Could not link against $ax_lib !" >&2;}
- { (exit 1); exit 1; }; }
- else
- case "x$build_os" in
- *bsd* )
- BOOST_LDFLAGS="-pthread $BOOST_LDFLAGS"
- break;
- ;;
- esac
-
- fi
- fi
-
- CPPFLAGS="$CPPFLAGS_SAVED"
- LDFLAGS="$LDFLAGS_SAVED"
- fi
-
-ac_ext=c
-ac_cpp='$CPP $CPPFLAGS'
-ac_compile='$CC -c $CFLAGS $CPPFLAGS conftest.$ac_ext >&5'
-ac_link='$CC -o conftest$ac_exeext $CFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5'
-ac_compiler_gnu=$ac_cv_c_compiler_gnu
-echo "$as_me:$LINENO: checking how to run the C preprocessor" >&5
-echo $ECHO_N "checking how to run the C preprocessor... $ECHO_C" >&6
-# On Suns, sometimes $CPP names a directory.
-if test -n "$CPP" && test -d "$CPP"; then
- CPP=
-fi
-if test -z "$CPP"; then
- if test "${ac_cv_prog_CPP+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- # Double quotes because CPP needs to be expanded
- for CPP in "$CC -E" "$CC -E -traditional-cpp" "/lib/cpp"
- do
- ac_preproc_ok=false
-for ac_c_preproc_warn_flag in '' yes
-do
- # Use a header file that comes with gcc, so configuring glibc
- # with a fresh cross-compiler works.
- # Prefer <limits.h> to <assert.h> if __STDC__ is defined, since
- # <limits.h> exists even on freestanding compilers.
- # On the NeXT, cc -E runs the code through the compiler's parser,
- # not just through cpp. "Syntax error" is here to catch this case.
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-#ifdef __STDC__
-# include <limits.h>
-#else
-# include <assert.h>
-#endif
- Syntax error
-_ACEOF
-if { (eval echo "$as_me:$LINENO: \"$ac_cpp conftest.$ac_ext\"") >&5
- (eval $ac_cpp conftest.$ac_ext) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } >/dev/null; then
- if test -s conftest.err; then
- ac_cpp_err=$ac_c_preproc_warn_flag
- ac_cpp_err=$ac_cpp_err$ac_c_werror_flag
- else
- ac_cpp_err=
- fi
-else
- ac_cpp_err=yes
-fi
-if test -z "$ac_cpp_err"; then
- :
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
- # Broken: fails on valid input.
-continue
-fi
-rm -f conftest.err conftest.$ac_ext
-
- # OK, works on sane cases. Now check whether non-existent headers
- # can be detected and how.
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-#include <ac_nonexistent.h>
-_ACEOF
-if { (eval echo "$as_me:$LINENO: \"$ac_cpp conftest.$ac_ext\"") >&5
- (eval $ac_cpp conftest.$ac_ext) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } >/dev/null; then
- if test -s conftest.err; then
- ac_cpp_err=$ac_c_preproc_warn_flag
- ac_cpp_err=$ac_cpp_err$ac_c_werror_flag
- else
- ac_cpp_err=
- fi
-else
- ac_cpp_err=yes
-fi
-if test -z "$ac_cpp_err"; then
- # Broken: success on invalid input.
-continue
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
- # Passes both tests.
-ac_preproc_ok=:
-break
-fi
-rm -f conftest.err conftest.$ac_ext
-
-done
-# Because of `break', _AC_PREPROC_IFELSE's cleaning code was skipped.
-rm -f conftest.err conftest.$ac_ext
-if $ac_preproc_ok; then
- break
-fi
-
- done
- ac_cv_prog_CPP=$CPP
-
-fi
- CPP=$ac_cv_prog_CPP
-else
- ac_cv_prog_CPP=$CPP
-fi
-echo "$as_me:$LINENO: result: $CPP" >&5
-echo "${ECHO_T}$CPP" >&6
-ac_preproc_ok=false
-for ac_c_preproc_warn_flag in '' yes
-do
- # Use a header file that comes with gcc, so configuring glibc
- # with a fresh cross-compiler works.
- # Prefer <limits.h> to <assert.h> if __STDC__ is defined, since
- # <limits.h> exists even on freestanding compilers.
- # On the NeXT, cc -E runs the code through the compiler's parser,
- # not just through cpp. "Syntax error" is here to catch this case.
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-#ifdef __STDC__
-# include <limits.h>
-#else
-# include <assert.h>
-#endif
- Syntax error
-_ACEOF
-if { (eval echo "$as_me:$LINENO: \"$ac_cpp conftest.$ac_ext\"") >&5
- (eval $ac_cpp conftest.$ac_ext) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } >/dev/null; then
- if test -s conftest.err; then
- ac_cpp_err=$ac_c_preproc_warn_flag
- ac_cpp_err=$ac_cpp_err$ac_c_werror_flag
- else
- ac_cpp_err=
- fi
-else
- ac_cpp_err=yes
-fi
-if test -z "$ac_cpp_err"; then
- :
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
- # Broken: fails on valid input.
-continue
-fi
-rm -f conftest.err conftest.$ac_ext
-
- # OK, works on sane cases. Now check whether non-existent headers
- # can be detected and how.
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-#include <ac_nonexistent.h>
-_ACEOF
-if { (eval echo "$as_me:$LINENO: \"$ac_cpp conftest.$ac_ext\"") >&5
- (eval $ac_cpp conftest.$ac_ext) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } >/dev/null; then
- if test -s conftest.err; then
- ac_cpp_err=$ac_c_preproc_warn_flag
- ac_cpp_err=$ac_cpp_err$ac_c_werror_flag
- else
- ac_cpp_err=
- fi
-else
- ac_cpp_err=yes
-fi
-if test -z "$ac_cpp_err"; then
- # Broken: success on invalid input.
-continue
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
- # Passes both tests.
-ac_preproc_ok=:
-break
-fi
-rm -f conftest.err conftest.$ac_ext
-
-done
-# Because of `break', _AC_PREPROC_IFELSE's cleaning code was skipped.
-rm -f conftest.err conftest.$ac_ext
-if $ac_preproc_ok; then
- :
-else
- { { echo "$as_me:$LINENO: error: C preprocessor \"$CPP\" fails sanity check
-See \`config.log' for more details." >&5
-echo "$as_me: error: C preprocessor \"$CPP\" fails sanity check
-See \`config.log' for more details." >&2;}
- { (exit 1); exit 1; }; }
-fi
-
-ac_ext=c
-ac_cpp='$CPP $CPPFLAGS'
-ac_compile='$CC -c $CFLAGS $CPPFLAGS conftest.$ac_ext >&5'
-ac_link='$CC -o conftest$ac_exeext $CFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5'
-ac_compiler_gnu=$ac_cv_c_compiler_gnu
-
-
-echo "$as_me:$LINENO: checking for egrep" >&5
-echo $ECHO_N "checking for egrep... $ECHO_C" >&6
-if test "${ac_cv_prog_egrep+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- if echo a | (grep -E '(a|b)') >/dev/null 2>&1
- then ac_cv_prog_egrep='grep -E'
- else ac_cv_prog_egrep='egrep'
- fi
-fi
-echo "$as_me:$LINENO: result: $ac_cv_prog_egrep" >&5
-echo "${ECHO_T}$ac_cv_prog_egrep" >&6
- EGREP=$ac_cv_prog_egrep
-
-
-echo "$as_me:$LINENO: checking for ANSI C header files" >&5
-echo $ECHO_N "checking for ANSI C header files... $ECHO_C" >&6
-if test "${ac_cv_header_stdc+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-#include <stdlib.h>
-#include <stdarg.h>
-#include <string.h>
-#include <float.h>
-
-int
-main ()
-{
-
- ;
- return 0;
-}
-_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_c_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
- ac_cv_header_stdc=yes
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-ac_cv_header_stdc=no
-fi
-rm -f conftest.err conftest.$ac_objext conftest.$ac_ext
-
-if test $ac_cv_header_stdc = yes; then
- # SunOS 4.x string.h does not declare mem*, contrary to ANSI.
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-#include <string.h>
-
-_ACEOF
-if (eval "$ac_cpp conftest.$ac_ext") 2>&5 |
- $EGREP "memchr" >/dev/null 2>&1; then
- :
-else
- ac_cv_header_stdc=no
-fi
-rm -f conftest*
-
-fi
-
-if test $ac_cv_header_stdc = yes; then
- # ISC 2.0.2 stdlib.h does not declare free, contrary to ANSI.
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-#include <stdlib.h>
-
-_ACEOF
-if (eval "$ac_cpp conftest.$ac_ext") 2>&5 |
- $EGREP "free" >/dev/null 2>&1; then
- :
-else
- ac_cv_header_stdc=no
-fi
-rm -f conftest*
-
-fi
-
-if test $ac_cv_header_stdc = yes; then
- # /bin/cc in Irix-4.0.5 gets non-ANSI ctype macros unless using -ansi.
- if test "$cross_compiling" = yes; then
- :
-else
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-#include <ctype.h>
-#if ((' ' & 0x0FF) == 0x020)
-# define ISLOWER(c) ('a' <= (c) && (c) <= 'z')
-# define TOUPPER(c) (ISLOWER(c) ? 'A' + ((c) - 'a') : (c))
-#else
-# define ISLOWER(c) \
- (('a' <= (c) && (c) <= 'i') \
- || ('j' <= (c) && (c) <= 'r') \
- || ('s' <= (c) && (c) <= 'z'))
-# define TOUPPER(c) (ISLOWER(c) ? ((c) | 0x40) : (c))
-#endif
-
-#define XOR(e, f) (((e) && !(f)) || (!(e) && (f)))
-int
-main ()
-{
- int i;
- for (i = 0; i < 256; i++)
- if (XOR (islower (i), ISLOWER (i))
- || toupper (i) != TOUPPER (i))
- exit(2);
- exit (0);
-}
-_ACEOF
-rm -f conftest$ac_exeext
-if { (eval echo "$as_me:$LINENO: \"$ac_link\"") >&5
- (eval $ac_link) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } && { ac_try='./conftest$ac_exeext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
- :
-else
- echo "$as_me: program exited with status $ac_status" >&5
-echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-( exit $ac_status )
-ac_cv_header_stdc=no
-fi
-rm -f core *.core gmon.out bb.out conftest$ac_exeext conftest.$ac_objext conftest.$ac_ext
-fi
-fi
-fi
-echo "$as_me:$LINENO: result: $ac_cv_header_stdc" >&5
-echo "${ECHO_T}$ac_cv_header_stdc" >&6
-if test $ac_cv_header_stdc = yes; then
-
-cat >>confdefs.h <<\_ACEOF
-#define STDC_HEADERS 1
-_ACEOF
-
-fi
-
-# On IRIX 5.3, sys/types and inttypes.h are conflicting.
-
-
-
-
-
-
-
-
-
-for ac_header in sys/types.h sys/stat.h stdlib.h string.h memory.h strings.h \
- inttypes.h stdint.h unistd.h
-do
-as_ac_Header=`echo "ac_cv_header_$ac_header" | $as_tr_sh`
-echo "$as_me:$LINENO: checking for $ac_header" >&5
-echo $ECHO_N "checking for $ac_header... $ECHO_C" >&6
-if eval "test \"\${$as_ac_Header+set}\" = set"; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-$ac_includes_default
-
-#include <$ac_header>
-_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_c_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
- eval "$as_ac_Header=yes"
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-eval "$as_ac_Header=no"
-fi
-rm -f conftest.err conftest.$ac_objext conftest.$ac_ext
-fi
-echo "$as_me:$LINENO: result: `eval echo '${'$as_ac_Header'}'`" >&5
-echo "${ECHO_T}`eval echo '${'$as_ac_Header'}'`" >&6
-if test `eval echo '${'$as_ac_Header'}'` = yes; then
- cat >>confdefs.h <<_ACEOF
-#define `echo "HAVE_$ac_header" | $as_tr_cpp` 1
-_ACEOF
-
-fi
-
-done
-
-
-#
-# Handle user hints
-#
-echo "$as_me:$LINENO: checking if zlib is wanted" >&5
-echo $ECHO_N "checking if zlib is wanted... $ECHO_C" >&6
-
-# Check whether --with-zlib or --without-zlib was given.
-if test "${with_zlib+set}" = set; then
- withval="$with_zlib"
- if test "$withval" != no ; then
- echo "$as_me:$LINENO: result: yes" >&5
-echo "${ECHO_T}yes" >&6
- if test -d "$withval"
- then
- ZLIB_HOME="$withval"
- else
- { echo "$as_me:$LINENO: WARNING: Sorry, $withval does not exist, checking usual places" >&5
-echo "$as_me: WARNING: Sorry, $withval does not exist, checking usual places" >&2;}
- fi
-else
- echo "$as_me:$LINENO: result: no" >&5
-echo "${ECHO_T}no" >&6
-fi
-else
- echo "$as_me:$LINENO: result: yes" >&5
-echo "${ECHO_T}yes" >&6
-fi;
-
-ZLIB_HOME=/usr/local
-if test ! -f "${ZLIB_HOME}/include/zlib.h"
-then
- ZLIB_HOME=/usr
-fi
-
-#
-# Locate zlib, if wanted
-#
-if test -n "${ZLIB_HOME}"
-then
- ZLIB_OLD_LDFLAGS=$LDFLAGS
- ZLIB_OLD_CPPFLAGS=$LDFLAGS
- LDFLAGS="$LDFLAGS -L${ZLIB_HOME}/lib"
- CPPFLAGS="$CPPFLAGS -I${ZLIB_HOME}/include"
-
-
- ac_ext=c
-ac_cpp='$CPP $CPPFLAGS'
-ac_compile='$CC -c $CFLAGS $CPPFLAGS conftest.$ac_ext >&5'
-ac_link='$CC -o conftest$ac_exeext $CFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5'
-ac_compiler_gnu=$ac_cv_c_compiler_gnu
-
- echo "$as_me:$LINENO: checking for inflateEnd in -lz" >&5
-echo $ECHO_N "checking for inflateEnd in -lz... $ECHO_C" >&6
-if test "${ac_cv_lib_z_inflateEnd+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- ac_check_lib_save_LIBS=$LIBS
-LIBS="-lz $LIBS"
-cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-
-/* Override any gcc2 internal prototype to avoid an error. */
-#ifdef __cplusplus
-extern "C"
-#endif
-/* We use char because int might match the return type of a gcc2
- builtin and then its argument prototype would still apply. */
-char inflateEnd ();
-int
-main ()
-{
-inflateEnd ();
- ;
- return 0;
-}
-_ACEOF
-rm -f conftest.$ac_objext conftest$ac_exeext
-if { (eval echo "$as_me:$LINENO: \"$ac_link\"") >&5
- (eval $ac_link) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_c_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest$ac_exeext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
- ac_cv_lib_z_inflateEnd=yes
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-ac_cv_lib_z_inflateEnd=no
-fi
-rm -f conftest.err conftest.$ac_objext \
- conftest$ac_exeext conftest.$ac_ext
-LIBS=$ac_check_lib_save_LIBS
-fi
-echo "$as_me:$LINENO: result: $ac_cv_lib_z_inflateEnd" >&5
-echo "${ECHO_T}$ac_cv_lib_z_inflateEnd" >&6
-if test $ac_cv_lib_z_inflateEnd = yes; then
- zlib_cv_libz=yes
-else
- zlib_cv_libz=no
-fi
-
- if test "${ac_cv_header_zlib_h+set}" = set; then
- echo "$as_me:$LINENO: checking for zlib.h" >&5
-echo $ECHO_N "checking for zlib.h... $ECHO_C" >&6
-if test "${ac_cv_header_zlib_h+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-fi
-echo "$as_me:$LINENO: result: $ac_cv_header_zlib_h" >&5
-echo "${ECHO_T}$ac_cv_header_zlib_h" >&6
-else
- # Is the header compilable?
-echo "$as_me:$LINENO: checking zlib.h usability" >&5
-echo $ECHO_N "checking zlib.h usability... $ECHO_C" >&6
-cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-$ac_includes_default
-#include <zlib.h>
-_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_c_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
- ac_header_compiler=yes
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-ac_header_compiler=no
-fi
-rm -f conftest.err conftest.$ac_objext conftest.$ac_ext
-echo "$as_me:$LINENO: result: $ac_header_compiler" >&5
-echo "${ECHO_T}$ac_header_compiler" >&6
-
-# Is the header present?
-echo "$as_me:$LINENO: checking zlib.h presence" >&5
-echo $ECHO_N "checking zlib.h presence... $ECHO_C" >&6
-cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-#include <zlib.h>
-_ACEOF
-if { (eval echo "$as_me:$LINENO: \"$ac_cpp conftest.$ac_ext\"") >&5
- (eval $ac_cpp conftest.$ac_ext) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } >/dev/null; then
- if test -s conftest.err; then
- ac_cpp_err=$ac_c_preproc_warn_flag
- ac_cpp_err=$ac_cpp_err$ac_c_werror_flag
- else
- ac_cpp_err=
- fi
-else
- ac_cpp_err=yes
-fi
-if test -z "$ac_cpp_err"; then
- ac_header_preproc=yes
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
- ac_header_preproc=no
-fi
-rm -f conftest.err conftest.$ac_ext
-echo "$as_me:$LINENO: result: $ac_header_preproc" >&5
-echo "${ECHO_T}$ac_header_preproc" >&6
-
-# So? What about this header?
-case $ac_header_compiler:$ac_header_preproc:$ac_c_preproc_warn_flag in
- yes:no: )
- { echo "$as_me:$LINENO: WARNING: zlib.h: accepted by the compiler, rejected by the preprocessor!" >&5
-echo "$as_me: WARNING: zlib.h: accepted by the compiler, rejected by the preprocessor!" >&2;}
- { echo "$as_me:$LINENO: WARNING: zlib.h: proceeding with the compiler's result" >&5
-echo "$as_me: WARNING: zlib.h: proceeding with the compiler's result" >&2;}
- ac_header_preproc=yes
- ;;
- no:yes:* )
- { echo "$as_me:$LINENO: WARNING: zlib.h: present but cannot be compiled" >&5
-echo "$as_me: WARNING: zlib.h: present but cannot be compiled" >&2;}
- { echo "$as_me:$LINENO: WARNING: zlib.h: check for missing prerequisite headers?" >&5
-echo "$as_me: WARNING: zlib.h: check for missing prerequisite headers?" >&2;}
- { echo "$as_me:$LINENO: WARNING: zlib.h: see the Autoconf documentation" >&5
-echo "$as_me: WARNING: zlib.h: see the Autoconf documentation" >&2;}
- { echo "$as_me:$LINENO: WARNING: zlib.h: section \"Present But Cannot Be Compiled\"" >&5
-echo "$as_me: WARNING: zlib.h: section \"Present But Cannot Be Compiled\"" >&2;}
- { echo "$as_me:$LINENO: WARNING: zlib.h: proceeding with the preprocessor's result" >&5
-echo "$as_me: WARNING: zlib.h: proceeding with the preprocessor's result" >&2;}
- { echo "$as_me:$LINENO: WARNING: zlib.h: in the future, the compiler will take precedence" >&5
-echo "$as_me: WARNING: zlib.h: in the future, the compiler will take precedence" >&2;}
- (
- cat <<\_ASBOX
-## ------------------------------ ##
-## Report this to cole at cs.umd.edu ##
-## ------------------------------ ##
-_ASBOX
- ) |
- sed "s/^/$as_me: WARNING: /" >&2
- ;;
-esac
-echo "$as_me:$LINENO: checking for zlib.h" >&5
-echo $ECHO_N "checking for zlib.h... $ECHO_C" >&6
-if test "${ac_cv_header_zlib_h+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- ac_cv_header_zlib_h=$ac_header_preproc
-fi
-echo "$as_me:$LINENO: result: $ac_cv_header_zlib_h" >&5
-echo "${ECHO_T}$ac_cv_header_zlib_h" >&6
-
-fi
-if test $ac_cv_header_zlib_h = yes; then
- zlib_cv_zlib_h=yes
-else
- zlib_cv_zlib_h=no
-fi
-
-
- ac_ext=c
-ac_cpp='$CPP $CPPFLAGS'
-ac_compile='$CC -c $CFLAGS $CPPFLAGS conftest.$ac_ext >&5'
-ac_link='$CC -o conftest$ac_exeext $CFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5'
-ac_compiler_gnu=$ac_cv_c_compiler_gnu
-
- if test "$zlib_cv_libz" = "yes" -a "$zlib_cv_zlib_h" = "yes"
- then
- #
- # If both library and header were found, use them
- #
-
-echo "$as_me:$LINENO: checking for inflateEnd in -lz" >&5
-echo $ECHO_N "checking for inflateEnd in -lz... $ECHO_C" >&6
-if test "${ac_cv_lib_z_inflateEnd+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- ac_check_lib_save_LIBS=$LIBS
-LIBS="-lz $LIBS"
-cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-
-/* Override any gcc2 internal prototype to avoid an error. */
-#ifdef __cplusplus
-extern "C"
-#endif
-/* We use char because int might match the return type of a gcc2
- builtin and then its argument prototype would still apply. */
-char inflateEnd ();
-int
-main ()
-{
-inflateEnd ();
- ;
- return 0;
-}
-_ACEOF
-rm -f conftest.$ac_objext conftest$ac_exeext
-if { (eval echo "$as_me:$LINENO: \"$ac_link\"") >&5
- (eval $ac_link) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_c_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest$ac_exeext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
- ac_cv_lib_z_inflateEnd=yes
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-ac_cv_lib_z_inflateEnd=no
-fi
-rm -f conftest.err conftest.$ac_objext \
- conftest$ac_exeext conftest.$ac_ext
-LIBS=$ac_check_lib_save_LIBS
-fi
-echo "$as_me:$LINENO: result: $ac_cv_lib_z_inflateEnd" >&5
-echo "${ECHO_T}$ac_cv_lib_z_inflateEnd" >&6
-if test $ac_cv_lib_z_inflateEnd = yes; then
- cat >>confdefs.h <<_ACEOF
-#define HAVE_LIBZ 1
-_ACEOF
-
- LIBS="-lz $LIBS"
-
-fi
-
- echo "$as_me:$LINENO: checking zlib in ${ZLIB_HOME}" >&5
-echo $ECHO_N "checking zlib in ${ZLIB_HOME}... $ECHO_C" >&6
- echo "$as_me:$LINENO: result: ok" >&5
-echo "${ECHO_T}ok" >&6
- ZLIB="-lz"
-
- else
- #
- # If either header or library was not found, revert and bomb
- #
- echo "$as_me:$LINENO: checking zlib in ${ZLIB_HOME}" >&5
-echo $ECHO_N "checking zlib in ${ZLIB_HOME}... $ECHO_C" >&6
- LDFLAGS="$ZLIB_OLD_LDFLAGS"
- CPPFLAGS="$ZLIB_OLD_CPPFLAGS"
- echo "$as_me:$LINENO: result: failed" >&5
-echo "${ECHO_T}failed" >&6
- { { echo "$as_me:$LINENO: error: either specify a valid zlib installation with --with-zlib=DIR or disable zlib usage with --without-zlib" >&5
-echo "$as_me: error: either specify a valid zlib installation with --with-zlib=DIR or disable zlib usage with --without-zlib" >&2;}
- { (exit 1); exit 1; }; }
- fi
-fi
-
-
-
-# Checks for header files.
-
-
-
-for ac_header in stdlib.h string.h unistd.h
-do
-as_ac_Header=`echo "ac_cv_header_$ac_header" | $as_tr_sh`
-if eval "test \"\${$as_ac_Header+set}\" = set"; then
- echo "$as_me:$LINENO: checking for $ac_header" >&5
-echo $ECHO_N "checking for $ac_header... $ECHO_C" >&6
-if eval "test \"\${$as_ac_Header+set}\" = set"; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-fi
-echo "$as_me:$LINENO: result: `eval echo '${'$as_ac_Header'}'`" >&5
-echo "${ECHO_T}`eval echo '${'$as_ac_Header'}'`" >&6
-else
- # Is the header compilable?
-echo "$as_me:$LINENO: checking $ac_header usability" >&5
-echo $ECHO_N "checking $ac_header usability... $ECHO_C" >&6
-cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-$ac_includes_default
-#include <$ac_header>
-_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_c_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
- ac_header_compiler=yes
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-ac_header_compiler=no
-fi
-rm -f conftest.err conftest.$ac_objext conftest.$ac_ext
-echo "$as_me:$LINENO: result: $ac_header_compiler" >&5
-echo "${ECHO_T}$ac_header_compiler" >&6
-
-# Is the header present?
-echo "$as_me:$LINENO: checking $ac_header presence" >&5
-echo $ECHO_N "checking $ac_header presence... $ECHO_C" >&6
-cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-#include <$ac_header>
-_ACEOF
-if { (eval echo "$as_me:$LINENO: \"$ac_cpp conftest.$ac_ext\"") >&5
- (eval $ac_cpp conftest.$ac_ext) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } >/dev/null; then
- if test -s conftest.err; then
- ac_cpp_err=$ac_c_preproc_warn_flag
- ac_cpp_err=$ac_cpp_err$ac_c_werror_flag
- else
- ac_cpp_err=
- fi
-else
- ac_cpp_err=yes
-fi
-if test -z "$ac_cpp_err"; then
- ac_header_preproc=yes
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
- ac_header_preproc=no
-fi
-rm -f conftest.err conftest.$ac_ext
-echo "$as_me:$LINENO: result: $ac_header_preproc" >&5
-echo "${ECHO_T}$ac_header_preproc" >&6
-
-# So? What about this header?
-case $ac_header_compiler:$ac_header_preproc:$ac_c_preproc_warn_flag in
- yes:no: )
- { echo "$as_me:$LINENO: WARNING: $ac_header: accepted by the compiler, rejected by the preprocessor!" >&5
-echo "$as_me: WARNING: $ac_header: accepted by the compiler, rejected by the preprocessor!" >&2;}
- { echo "$as_me:$LINENO: WARNING: $ac_header: proceeding with the compiler's result" >&5
-echo "$as_me: WARNING: $ac_header: proceeding with the compiler's result" >&2;}
- ac_header_preproc=yes
- ;;
- no:yes:* )
- { echo "$as_me:$LINENO: WARNING: $ac_header: present but cannot be compiled" >&5
-echo "$as_me: WARNING: $ac_header: present but cannot be compiled" >&2;}
- { echo "$as_me:$LINENO: WARNING: $ac_header: check for missing prerequisite headers?" >&5
-echo "$as_me: WARNING: $ac_header: check for missing prerequisite headers?" >&2;}
- { echo "$as_me:$LINENO: WARNING: $ac_header: see the Autoconf documentation" >&5
-echo "$as_me: WARNING: $ac_header: see the Autoconf documentation" >&2;}
- { echo "$as_me:$LINENO: WARNING: $ac_header: section \"Present But Cannot Be Compiled\"" >&5
-echo "$as_me: WARNING: $ac_header: section \"Present But Cannot Be Compiled\"" >&2;}
- { echo "$as_me:$LINENO: WARNING: $ac_header: proceeding with the preprocessor's result" >&5
-echo "$as_me: WARNING: $ac_header: proceeding with the preprocessor's result" >&2;}
- { echo "$as_me:$LINENO: WARNING: $ac_header: in the future, the compiler will take precedence" >&5
-echo "$as_me: WARNING: $ac_header: in the future, the compiler will take precedence" >&2;}
- (
- cat <<\_ASBOX
-## ------------------------------ ##
-## Report this to cole at cs.umd.edu ##
-## ------------------------------ ##
-_ASBOX
- ) |
- sed "s/^/$as_me: WARNING: /" >&2
- ;;
-esac
-echo "$as_me:$LINENO: checking for $ac_header" >&5
-echo $ECHO_N "checking for $ac_header... $ECHO_C" >&6
-if eval "test \"\${$as_ac_Header+set}\" = set"; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- eval "$as_ac_Header=\$ac_header_preproc"
-fi
-echo "$as_me:$LINENO: result: `eval echo '${'$as_ac_Header'}'`" >&5
-echo "${ECHO_T}`eval echo '${'$as_ac_Header'}'`" >&6
-
-fi
-if test `eval echo '${'$as_ac_Header'}'` = yes; then
- cat >>confdefs.h <<_ACEOF
-#define `echo "HAVE_$ac_header" | $as_tr_cpp` 1
-_ACEOF
-
-fi
-
-done
-
-
-# Checks for typedefs, structures, and compiler characteristics.
-echo "$as_me:$LINENO: checking for stdbool.h that conforms to C99" >&5
-echo $ECHO_N "checking for stdbool.h that conforms to C99... $ECHO_C" >&6
-if test "${ac_cv_header_stdbool_h+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-
-#include <stdbool.h>
-#ifndef bool
-# error bool is not defined
-#endif
-#ifndef false
-# error false is not defined
-#endif
-#if false
-# error false is not 0
-#endif
-#ifndef true
-# error true is not defined
-#endif
-#if true != 1
-# error true is not 1
-#endif
-#ifndef __bool_true_false_are_defined
-# error __bool_true_false_are_defined is not defined
-#endif
-
- struct s { _Bool s: 1; _Bool t; } s;
-
- char a[true == 1 ? 1 : -1];
- char b[false == 0 ? 1 : -1];
- char c[__bool_true_false_are_defined == 1 ? 1 : -1];
- char d[(bool) -0.5 == true ? 1 : -1];
- bool e = &s;
- char f[(_Bool) -0.0 == false ? 1 : -1];
- char g[true];
- char h[sizeof (_Bool)];
- char i[sizeof s.t];
-
-int
-main ()
-{
- return !a + !b + !c + !d + !e + !f + !g + !h + !i;
- ;
- return 0;
-}
-_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_c_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
- ac_cv_header_stdbool_h=yes
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-ac_cv_header_stdbool_h=no
-fi
-rm -f conftest.err conftest.$ac_objext conftest.$ac_ext
-fi
-echo "$as_me:$LINENO: result: $ac_cv_header_stdbool_h" >&5
-echo "${ECHO_T}$ac_cv_header_stdbool_h" >&6
-echo "$as_me:$LINENO: checking for _Bool" >&5
-echo $ECHO_N "checking for _Bool... $ECHO_C" >&6
-if test "${ac_cv_type__Bool+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-$ac_includes_default
-int
-main ()
-{
-if ((_Bool *) 0)
- return 0;
-if (sizeof (_Bool))
- return 0;
- ;
- return 0;
-}
-_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_c_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
- ac_cv_type__Bool=yes
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-ac_cv_type__Bool=no
-fi
-rm -f conftest.err conftest.$ac_objext conftest.$ac_ext
-fi
-echo "$as_me:$LINENO: result: $ac_cv_type__Bool" >&5
-echo "${ECHO_T}$ac_cv_type__Bool" >&6
-if test $ac_cv_type__Bool = yes; then
-
-cat >>confdefs.h <<_ACEOF
-#define HAVE__BOOL 1
-_ACEOF
-
-
-fi
-
-if test $ac_cv_header_stdbool_h = yes; then
-
-cat >>confdefs.h <<\_ACEOF
-#define HAVE_STDBOOL_H 1
-_ACEOF
-
-fi
-
-echo "$as_me:$LINENO: checking for inline" >&5
-echo $ECHO_N "checking for inline... $ECHO_C" >&6
-if test "${ac_cv_c_inline+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- ac_cv_c_inline=no
-for ac_kw in inline __inline__ __inline; do
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-#ifndef __cplusplus
-typedef int foo_t;
-static $ac_kw foo_t static_foo () {return 0; }
-$ac_kw foo_t foo () {return 0; }
-#endif
-
-_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_c_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
- ac_cv_c_inline=$ac_kw; break
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-fi
-rm -f conftest.err conftest.$ac_objext conftest.$ac_ext
-done
-
-fi
-echo "$as_me:$LINENO: result: $ac_cv_c_inline" >&5
-echo "${ECHO_T}$ac_cv_c_inline" >&6
-
-
-case $ac_cv_c_inline in
- inline | yes) ;;
- *)
- case $ac_cv_c_inline in
- no) ac_val=;;
- *) ac_val=$ac_cv_c_inline;;
- esac
- cat >>confdefs.h <<_ACEOF
-#ifndef __cplusplus
-#define inline $ac_val
-#endif
-_ACEOF
- ;;
-esac
-
-echo "$as_me:$LINENO: checking for pid_t" >&5
-echo $ECHO_N "checking for pid_t... $ECHO_C" >&6
-if test "${ac_cv_type_pid_t+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-$ac_includes_default
-int
-main ()
-{
-if ((pid_t *) 0)
- return 0;
-if (sizeof (pid_t))
- return 0;
- ;
- return 0;
-}
-_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_c_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
- ac_cv_type_pid_t=yes
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-ac_cv_type_pid_t=no
-fi
-rm -f conftest.err conftest.$ac_objext conftest.$ac_ext
-fi
-echo "$as_me:$LINENO: result: $ac_cv_type_pid_t" >&5
-echo "${ECHO_T}$ac_cv_type_pid_t" >&6
-if test $ac_cv_type_pid_t = yes; then
- :
-else
-
-cat >>confdefs.h <<_ACEOF
-#define pid_t int
-_ACEOF
-
-fi
-
-echo "$as_me:$LINENO: checking for size_t" >&5
-echo $ECHO_N "checking for size_t... $ECHO_C" >&6
-if test "${ac_cv_type_size_t+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-$ac_includes_default
-int
-main ()
-{
-if ((size_t *) 0)
- return 0;
-if (sizeof (size_t))
- return 0;
- ;
- return 0;
-}
-_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_c_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
- ac_cv_type_size_t=yes
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-ac_cv_type_size_t=no
-fi
-rm -f conftest.err conftest.$ac_objext conftest.$ac_ext
-fi
-echo "$as_me:$LINENO: result: $ac_cv_type_size_t" >&5
-echo "${ECHO_T}$ac_cv_type_size_t" >&6
-if test $ac_cv_type_size_t = yes; then
- :
-else
-
-cat >>confdefs.h <<_ACEOF
-#define size_t unsigned
-_ACEOF
-
-fi
-
-echo "$as_me:$LINENO: checking for ptrdiff_t" >&5
-echo $ECHO_N "checking for ptrdiff_t... $ECHO_C" >&6
-if test "${ac_cv_type_ptrdiff_t+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-$ac_includes_default
-int
-main ()
-{
-if ((ptrdiff_t *) 0)
- return 0;
-if (sizeof (ptrdiff_t))
- return 0;
- ;
- return 0;
-}
-_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_c_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
- ac_cv_type_ptrdiff_t=yes
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-ac_cv_type_ptrdiff_t=no
-fi
-rm -f conftest.err conftest.$ac_objext conftest.$ac_ext
-fi
-echo "$as_me:$LINENO: result: $ac_cv_type_ptrdiff_t" >&5
-echo "${ECHO_T}$ac_cv_type_ptrdiff_t" >&6
-if test $ac_cv_type_ptrdiff_t = yes; then
-
-cat >>confdefs.h <<_ACEOF
-#define HAVE_PTRDIFF_T 1
-_ACEOF
-
-
-fi
-
-
-# Checks for library functions.
-#AC_FUNC_FORK
-#AC_CHECK_FUNCS([floor memmove pow regcomp sqrt strchr strcspn strspn strstr])
-
-# check the platform
-echo "$as_me:$LINENO: checking host system type" >&5
-echo $ECHO_N "checking host system type... $ECHO_C" >&6
-if test "${ac_cv_host+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- ac_cv_host_alias=$host_alias
-test -z "$ac_cv_host_alias" &&
- ac_cv_host_alias=$ac_cv_build_alias
-ac_cv_host=`$ac_config_sub $ac_cv_host_alias` ||
- { { echo "$as_me:$LINENO: error: $ac_config_sub $ac_cv_host_alias failed" >&5
-echo "$as_me: error: $ac_config_sub $ac_cv_host_alias failed" >&2;}
- { (exit 1); exit 1; }; }
-
-fi
-echo "$as_me:$LINENO: result: $ac_cv_host" >&5
-echo "${ECHO_T}$ac_cv_host" >&6
-host=$ac_cv_host
-host_cpu=`echo $ac_cv_host | sed 's/^\([^-]*\)-\([^-]*\)-\(.*\)$/\1/'`
-host_vendor=`echo $ac_cv_host | sed 's/^\([^-]*\)-\([^-]*\)-\(.*\)$/\2/'`
-host_os=`echo $ac_cv_host | sed 's/^\([^-]*\)-\([^-]*\)-\(.*\)$/\3/'`
-
-
-
-# set CFLAGS and CXXFLAGS
-user_CFLAGS=${CFLAGS}
-generic_CFLAGS="-Wall -Wno-strict-aliasing -g -gdwarf-2 -Wuninitialized"
-ext_CFLAGS=""
-debug_CFLAGS=""
-#echo "${host_cpu}-${host_os}"
-case "${host_cpu}-${host_os}" in
- i*86-*linux*)
- ext_CFLAGS="-march=i686";;
- i*86-darwin*)
- CFLAGS="-m64"
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-
-int
-main ()
-{
-
- ;
- return 0;
-}
-_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_c_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
- ext_CFLAGS="-arch x86_64"
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-fi
-rm -f conftest.err conftest.$ac_objext conftest.$ac_ext;;
- *)
- echo "$as_me:$LINENO: checking if gcc accepts -m64" >&5
-echo $ECHO_N "checking if gcc accepts -m64... $ECHO_C" >&6
- CFLAGS="-m64"
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-
-int
-main ()
-{
-
- ;
- return 0;
-}
-_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_c_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
- ext_CFLAGS="-m64"; echo "$as_me:$LINENO: result: yes" >&5
-echo "${ECHO_T}yes" >&6
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-ext_CFLAGS="-D_FILE_OFFSET_BITS=64"; echo "$as_me:$LINENO: result: no" >&5
-echo "${ECHO_T}no" >&6
-fi
-rm -f conftest.err conftest.$ac_objext conftest.$ac_ext;;
-esac
-
-# Check whether --enable-vectorize or --disable-vectorize was given.
-if test "${enable_vectorize+set}" = set; then
- enableval="$enable_vectorize"
- ext_CFLAGS="${ext_CFLAGS} -ftree-vectorize -msse3 -ffast-math -ftree-vectorizer-verbose=99"
-fi;
-
-# Check whether --enable-intel64 or --disable-intel64 was given.
-if test "${enable_intel64+set}" = set; then
- enableval="$enable_intel64"
- ext_CFLAGS="${ext_CFLAGS} -march=nocona"
-fi;
-
-# Check whether --enable-debug or --disable-debug was given.
-if test "${enable_debug+set}" = set; then
- enableval="$enable_debug"
-
-else
- enable_debug=no
-fi;
-
-
-# Check whether --enable-optim or --disable-optim was given.
-if test "${enable_optim+set}" = set; then
- enableval="$enable_optim"
- if test "x$enable_optim" = xyes; then enable_optim=3; fi
-else
- enable_optim=3
-fi;
-
-if test "x$enable_optim" != xno; then
- ext_CFLAGS="$ext_CFLAGS -O$enable_optim"
-fi
-
-
-if test "x$enable_debug" = xyes; then
- debug_CFLAGS="-DDEBUG"
-else
- debug_CFLAGS="-DNDEBUG"
-fi
-
-
-# Check whether --enable-profiling or --disable-profiling was given.
-if test "${enable_profiling+set}" = set; then
- enableval="$enable_profiling"
- ext_LDFLAGS="-lprofiler -ltcmalloc"
-fi;
-
-CFLAGS="${generic_CFLAGS} ${ext_CFLAGS} ${user_CFLAGS} ${debug_CFLAGS} ${OPENMP_CFLAGS}"
-CXXFLAGS="$CFLAGS"
-CXXFLAGS="$CXXFLAGS $BOOST_CPPFLAGS $BAM_CPPFLAGS"
-LDFLAGS="$ext_LDFLAGS"
-
-# Checks for structures/functions that can be used to determine system memory
-echo "$as_me:$LINENO: checking for struct sysinfo.totalram" >&5
-echo $ECHO_N "checking for struct sysinfo.totalram... $ECHO_C" >&6
-if test "${ac_cv_member_struct_sysinfo_totalram+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-#include <sys/sysinfo.h>
-
-int
-main ()
-{
-static struct sysinfo ac_aggr;
-if (ac_aggr.totalram)
-return 0;
- ;
- return 0;
-}
-_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_c_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
- ac_cv_member_struct_sysinfo_totalram=yes
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-#include <sys/sysinfo.h>
-
-int
-main ()
-{
-static struct sysinfo ac_aggr;
-if (sizeof ac_aggr.totalram)
-return 0;
- ;
- return 0;
-}
-_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_c_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
- ac_cv_member_struct_sysinfo_totalram=yes
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-ac_cv_member_struct_sysinfo_totalram=no
-fi
-rm -f conftest.err conftest.$ac_objext conftest.$ac_ext
-fi
-rm -f conftest.err conftest.$ac_objext conftest.$ac_ext
-fi
-echo "$as_me:$LINENO: result: $ac_cv_member_struct_sysinfo_totalram" >&5
-echo "${ECHO_T}$ac_cv_member_struct_sysinfo_totalram" >&6
-if test $ac_cv_member_struct_sysinfo_totalram = yes; then
-
-cat >>confdefs.h <<_ACEOF
-#define HAVE_STRUCT_SYSINFO_TOTALRAM 1
-_ACEOF
-
-
-fi
-
-echo "$as_me:$LINENO: checking whether sysctl is declared" >&5
-echo $ECHO_N "checking whether sysctl is declared... $ECHO_C" >&6
-if test "${ac_cv_have_decl_sysctl+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-#include <sys/sysctl.h>
-
-int
-main ()
-{
-#ifndef sysctl
- char *p = (char *) sysctl;
-#endif
-
- ;
- return 0;
-}
-_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_c_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
- ac_cv_have_decl_sysctl=yes
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-ac_cv_have_decl_sysctl=no
-fi
-rm -f conftest.err conftest.$ac_objext conftest.$ac_ext
-fi
-echo "$as_me:$LINENO: result: $ac_cv_have_decl_sysctl" >&5
-echo "${ECHO_T}$ac_cv_have_decl_sysctl" >&6
-if test $ac_cv_have_decl_sysctl = yes; then
-
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-s, at sbindir@,$sbindir,;t t
-s, at libexecdir@,$libexecdir,;t t
-s, at datadir@,$datadir,;t t
-s, at sysconfdir@,$sysconfdir,;t t
-s, at sharedstatedir@,$sharedstatedir,;t t
-s, at localstatedir@,$localstatedir,;t t
-s, at libdir@,$libdir,;t t
-s, at includedir@,$includedir,;t t
-s, at oldincludedir@,$oldincludedir,;t t
-s, at infodir@,$infodir,;t t
-s, at mandir@,$mandir,;t t
-s, at build_alias@,$build_alias,;t t
-s, at host_alias@,$host_alias,;t t
-s, at target_alias@,$target_alias,;t t
-s, at DEFS@,$DEFS,;t t
-s, at ECHO_C@,$ECHO_C,;t t
-s, at ECHO_N@,$ECHO_N,;t t
-s, at ECHO_T@,$ECHO_T,;t t
-s, at LIBS@,$LIBS,;t t
-s, at INSTALL_PROGRAM@,$INSTALL_PROGRAM,;t t
-s, at INSTALL_SCRIPT@,$INSTALL_SCRIPT,;t t
-s, at INSTALL_DATA@,$INSTALL_DATA,;t t
-s, at CYGPATH_W@,$CYGPATH_W,;t t
-s, at PACKAGE@,$PACKAGE,;t t
-s, at VERSION@,$VERSION,;t t
-s, at ACLOCAL@,$ACLOCAL,;t t
-s, at AUTOCONF@,$AUTOCONF,;t t
-s, at AUTOMAKE@,$AUTOMAKE,;t t
-s, at AUTOHEADER@,$AUTOHEADER,;t t
-s, at MAKEINFO@,$MAKEINFO,;t t
-s, at install_sh@,$install_sh,;t t
-s, at STRIP@,$STRIP,;t t
-s, at ac_ct_STRIP@,$ac_ct_STRIP,;t t
-s, at INSTALL_STRIP_PROGRAM@,$INSTALL_STRIP_PROGRAM,;t t
-s, at mkdir_p@,$mkdir_p,;t t
-s, at AWK@,$AWK,;t t
-s, at SET_MAKE@,$SET_MAKE,;t t
-s, at am__leading_dot@,$am__leading_dot,;t t
-s, at AMTAR@,$AMTAR,;t t
-s, at am__tar@,$am__tar,;t t
-s, at am__untar@,$am__untar,;t t
-s, at PYTHON@,$PYTHON,;t t
-s, at CXX@,$CXX,;t t
-s, at CXXFLAGS@,$CXXFLAGS,;t t
-s, at LDFLAGS@,$LDFLAGS,;t t
-s, at CPPFLAGS@,$CPPFLAGS,;t t
-s, at ac_ct_CXX@,$ac_ct_CXX,;t t
-s, at EXEEXT@,$EXEEXT,;t t
-s, at OBJEXT@,$OBJEXT,;t t
-s, at DEPDIR@,$DEPDIR,;t t
-s, at am__include@,$am__include,;t t
-s, at am__quote@,$am__quote,;t t
-s, at AMDEP_TRUE@,$AMDEP_TRUE,;t t
-s, at AMDEP_FALSE@,$AMDEP_FALSE,;t t
-s, at AMDEPBACKSLASH@,$AMDEPBACKSLASH,;t t
-s, at CXXDEPMODE@,$CXXDEPMODE,;t t
-s, at am__fastdepCXX_TRUE@,$am__fastdepCXX_TRUE,;t t
-s, at am__fastdepCXX_FALSE@,$am__fastdepCXX_FALSE,;t t
-s, at CC@,$CC,;t t
-s, at CFLAGS@,$CFLAGS,;t t
-s, at ac_ct_CC@,$ac_ct_CC,;t t
-s, at CCDEPMODE@,$CCDEPMODE,;t t
-s, at am__fastdepCC_TRUE@,$am__fastdepCC_TRUE,;t t
-s, at am__fastdepCC_FALSE@,$am__fastdepCC_FALSE,;t t
-s, at RANLIB@,$RANLIB,;t t
-s, at ac_ct_RANLIB@,$ac_ct_RANLIB,;t t
-s, at PYTHON_VERSION@,$PYTHON_VERSION,;t t
-s, at PYTHON_PREFIX@,$PYTHON_PREFIX,;t t
-s, at PYTHON_EXEC_PREFIX@,$PYTHON_EXEC_PREFIX,;t t
-s, at PYTHON_PLATFORM@,$PYTHON_PLATFORM,;t t
-s, at pythondir@,$pythondir,;t t
-s, at pkgpythondir@,$pkgpythondir,;t t
-s, at pyexecdir@,$pyexecdir,;t t
-s, at pkgpyexecdir@,$pkgpyexecdir,;t t
-s, at BOOST_CPPFLAGS@,$BOOST_CPPFLAGS,;t t
-s, at BOOST_LDFLAGS@,$BOOST_LDFLAGS,;t t
-s, at BAM_CPPFLAGS@,$BAM_CPPFLAGS,;t t
-s, at BAM_LDFLAGS@,$BAM_LDFLAGS,;t t
-s, at BAM_LIB@,$BAM_LIB,;t t
-s, at build@,$build,;t t
-s, at build_cpu@,$build_cpu,;t t
-s, at build_vendor@,$build_vendor,;t t
-s, at build_os@,$build_os,;t t
-s, at BOOST_THREAD_LIB@,$BOOST_THREAD_LIB,;t t
-s, at CPP@,$CPP,;t t
-s, at EGREP@,$EGREP,;t t
-s, at ZLIB@,$ZLIB,;t t
-s, at host@,$host,;t t
-s, at host_cpu@,$host_cpu,;t t
-s, at host_vendor@,$host_vendor,;t t
-s, at host_os@,$host_os,;t t
-s, at LIBOBJS@,$LIBOBJS,;t t
-s, at LTLIBOBJS@,$LTLIBOBJS,;t t
-CEOF
-
-_ACEOF
-
- cat >>$CONFIG_STATUS <<\_ACEOF
- # Split the substitutions into bite-sized pieces for seds with
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- # The purpose of the label and of the branching condition is to
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- ac_file=`echo "$ac_file" | sed 's,:.*,,'` ;;
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-
- # Compute @srcdir@, @top_srcdir@, and @INSTALL@ for subdirectories.
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- X"$ac_file" : 'X\(//\)[^/]' \| \
- X"$ac_file" : 'X\(//\)$' \| \
- X"$ac_file" : 'X\(/\)' \| \
- . : '\(.\)' 2>/dev/null ||
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- { if $as_mkdir_p; then
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- as_dir=`(dirname "$as_dir") 2>/dev/null ||
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- X"$as_dir" : 'X\(//\)[^/]' \| \
- X"$as_dir" : 'X\(//\)$' \| \
- X"$as_dir" : 'X\(/\)' \| \
- . : '\(.\)' 2>/dev/null ||
-echo X"$as_dir" |
- sed '/^X\(.*[^/]\)\/\/*[^/][^/]*\/*$/{ s//\1/; q; }
- /^X\(\/\/\)[^/].*/{ s//\1/; q; }
- /^X\(\/\/\)$/{ s//\1/; q; }
- /^X\(\/\).*/{ s//\1/; q; }
- s/.*/./; q'`
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- { (exit 1); exit 1; }; }; }
-
- ac_builddir=.
-
-if test "$ac_dir" != .; then
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- # A "../" for each directory in $ac_dir_suffix.
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- ac_dir_suffix= ac_top_builddir=
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-
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- ac_top_srcdir=`echo $ac_top_builddir | sed 's,/$,,'`
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- [\\/]* | ?:[\\/]* ) # Absolute path.
- ac_srcdir=$srcdir$ac_dir_suffix;
- ac_top_srcdir=$srcdir ;;
- *) # Relative path.
- ac_srcdir=$ac_top_builddir$srcdir$ac_dir_suffix
- ac_top_srcdir=$ac_top_builddir$srcdir ;;
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-
-# Do not use `cd foo && pwd` to compute absolute paths, because
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- [\\/]* | ?:[\\/]* ) ac_abs_top_builddir=${ac_top_builddir}.;;
- *) ac_abs_top_builddir=$ac_abs_builddir/${ac_top_builddir}.;;
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-case $ac_abs_builddir in
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-*)
- case $ac_srcdir in
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-case $ac_abs_builddir in
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-*)
- case $ac_top_srcdir in
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- [\\/]* | ?:[\\/]* ) ac_abs_top_srcdir=$ac_top_srcdir;;
- *) ac_abs_top_srcdir=$ac_abs_builddir/$ac_top_srcdir;;
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-esac
-
-
- case $INSTALL in
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- *) ac_INSTALL=$ac_top_builddir$INSTALL ;;
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-
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-echo "$as_me: creating $ac_file" >&6;}
- rm -f "$ac_file"
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- # Let's still pretend it is `configure' which instantiates (i.e., don't
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- configure_input="$ac_file. "
- fi
- configure_input=$configure_input"Generated from `echo $ac_file_in |
- sed 's,.*/,,'` by configure."
-
- # First look for the input files in the build tree, otherwise in the
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- ac_file_inputs=`IFS=:
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- # Absolute (can't be DOS-style, as IFS=:)
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-echo "$as_me: error: cannot find input file: $f" >&2;}
- { (exit 1); exit 1; }; }
- echo "$f";;
- *) # Relative
- if test -f "$f"; then
- # Build tree
- echo "$f"
- elif test -f "$srcdir/$f"; then
- # Source tree
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- else
- # /dev/null tree
- { { echo "$as_me:$LINENO: error: cannot find input file: $f" >&5
-echo "$as_me: error: cannot find input file: $f" >&2;}
- { (exit 1); exit 1; }; }
- fi;;
- esac
- done` || { (exit 1); exit 1; }
-_ACEOF
-cat >>$CONFIG_STATUS <<_ACEOF
- sed "$ac_vpsub
-$extrasub
-_ACEOF
-cat >>$CONFIG_STATUS <<\_ACEOF
-:t
-/@[a-zA-Z_][a-zA-Z_0-9]*@/!b
-s, at configure_input@,$configure_input,;t t
-s, at srcdir@,$ac_srcdir,;t t
-s, at abs_srcdir@,$ac_abs_srcdir,;t t
-s, at top_srcdir@,$ac_top_srcdir,;t t
-s, at abs_top_srcdir@,$ac_abs_top_srcdir,;t t
-s, at builddir@,$ac_builddir,;t t
-s, at abs_builddir@,$ac_abs_builddir,;t t
-s, at top_builddir@,$ac_top_builddir,;t t
-s, at abs_top_builddir@,$ac_abs_top_builddir,;t t
-s, at INSTALL@,$ac_INSTALL,;t t
-" $ac_file_inputs | (eval "$ac_sed_cmds") >$tmp/out
- rm -f $tmp/stdin
- if test x"$ac_file" != x-; then
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- else
- cat $tmp/out
- rm -f $tmp/out
- fi
-
-done
-_ACEOF
-cat >>$CONFIG_STATUS <<\_ACEOF
-
-#
-# CONFIG_HEADER section.
-#
-
-# These sed commands are passed to sed as "A NAME B NAME C VALUE D", where
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-#
-# ac_d sets the value in "#define NAME VALUE" lines.
-ac_dA='s,^\([ ]*\)#\([ ]*define[ ][ ]*\)'
-ac_dB='[ ].*$,\1#\2'
-ac_dC=' '
-ac_dD=',;t'
-# ac_u turns "#undef NAME" without trailing blanks into "#define NAME VALUE".
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-ac_uB='$,\1#\2define\3'
-ac_uC=' '
-ac_uD=',;t'
-
-for ac_file in : $CONFIG_HEADERS; do test "x$ac_file" = x: && continue
- # Support "outfile[:infile[:infile...]]", defaulting infile="outfile.in".
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- cat >$tmp/stdin
- ac_file_in=`echo "$ac_file" | sed 's,[^:]*:,,'`
- ac_file=`echo "$ac_file" | sed 's,:.*,,'` ;;
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- ac_file=`echo "$ac_file" | sed 's,:.*,,'` ;;
- * ) ac_file_in=$ac_file.in ;;
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-
- test x"$ac_file" != x- && { echo "$as_me:$LINENO: creating $ac_file" >&5
-echo "$as_me: creating $ac_file" >&6;}
-
- # First look for the input files in the build tree, otherwise in the
- # src tree.
- ac_file_inputs=`IFS=:
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- case $f in
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- [\\/$]*)
- # Absolute (can't be DOS-style, as IFS=:)
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-echo "$as_me: error: cannot find input file: $f" >&2;}
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- # Do quote $f, to prevent DOS paths from being IFS'd.
- echo "$f";;
- *) # Relative
- if test -f "$f"; then
- # Build tree
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- elif test -f "$srcdir/$f"; then
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- # /dev/null tree
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-echo "$as_me: error: cannot find input file: $f" >&2;}
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-
-_ACEOF
-
-# Transform confdefs.h into two sed scripts, `conftest.defines' and
-# `conftest.undefs', that substitutes the proper values into
-# config.h.in to produce config.h. The first handles `#define'
-# templates, and the second `#undef' templates.
-# And first: Protect against being on the right side of a sed subst in
-# config.status. Protect against being in an unquoted here document
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-# Using a here document instead of a string reduces the quoting nightmare.
-# Putting comments in sed scripts is not portable.
-#
-# `end' is used to avoid that the second main sed command (meant for
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-# See the Autoconf documentation for `clear'.
-cat >confdef2sed.sed <<\_ACEOF
-s/[\\&,]/\\&/g
-s,[\\$`],\\&,g
-t clear
-: clear
-s,^[ ]*#[ ]*define[ ][ ]*\([^ (][^ (]*\)\(([^)]*)\)[ ]*\(.*\)$,${ac_dA}\1${ac_dB}\1\2${ac_dC}\3${ac_dD},gp
-t end
-s,^[ ]*#[ ]*define[ ][ ]*\([^ ][^ ]*\)[ ]*\(.*\)$,${ac_dA}\1${ac_dB}\1${ac_dC}\2${ac_dD},gp
-: end
-_ACEOF
-# If some macros were called several times there might be several times
-# the same #defines, which is useless. Nevertheless, we may not want to
-# sort them, since we want the *last* AC-DEFINE to be honored.
-uniq confdefs.h | sed -n -f confdef2sed.sed >conftest.defines
-sed 's/ac_d/ac_u/g' conftest.defines >conftest.undefs
-rm -f confdef2sed.sed
-
-# This sed command replaces #undef with comments. This is necessary, for
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-# on some systems where configure will not decide to define it.
-cat >>conftest.undefs <<\_ACEOF
-s,^[ ]*#[ ]*undef[ ][ ]*[a-zA-Z_][a-zA-Z_0-9]*,/* & */,
-_ACEOF
-
-# Break up conftest.defines because some shells have a limit on the size
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-echo ' if grep "^[ ]*#[ ]*define" $tmp/in >/dev/null; then' >>$CONFIG_STATUS
-echo ' # If there are no defines, we may have an empty if/fi' >>$CONFIG_STATUS
-echo ' :' >>$CONFIG_STATUS
-rm -f conftest.tail
-while grep . conftest.defines >/dev/null
-do
- # Write a limited-size here document to $tmp/defines.sed.
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- # Speed up: don't consider the non `#define' lines.
- echo '/^[ ]*#[ ]*define/!b' >>$CONFIG_STATUS
- # Work around the forget-to-reset-the-flag bug.
- echo 't clr' >>$CONFIG_STATUS
- echo ': clr' >>$CONFIG_STATUS
- sed ${ac_max_here_lines}q conftest.defines >>$CONFIG_STATUS
- echo 'CEOF
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- mv $tmp/out $tmp/in
-' >>$CONFIG_STATUS
- sed 1,${ac_max_here_lines}d conftest.defines >conftest.tail
- rm -f conftest.defines
- mv conftest.tail conftest.defines
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-echo ' fi # grep' >>$CONFIG_STATUS
-echo >>$CONFIG_STATUS
-
-# Break up conftest.undefs because some shells have a limit on the size
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-do
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- # Speed up: don't consider the non `#undef'
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- # Work around the forget-to-reset-the-flag bug.
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- echo ': clr' >>$CONFIG_STATUS
- sed ${ac_max_here_lines}q conftest.undefs >>$CONFIG_STATUS
- echo 'CEOF
- sed -f $tmp/undefs.sed $tmp/in >$tmp/out
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- mv $tmp/out $tmp/in
-' >>$CONFIG_STATUS
- sed 1,${ac_max_here_lines}d conftest.undefs >conftest.tail
- rm -f conftest.undefs
- mv conftest.tail conftest.undefs
-done
-rm -f conftest.undefs
-
-cat >>$CONFIG_STATUS <<\_ACEOF
- # Let's still pretend it is `configure' which instantiates (i.e., don't
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- else
- echo "/* $ac_file. Generated by configure. */" >$tmp/config.h
- fi
- cat $tmp/in >>$tmp/config.h
- rm -f $tmp/in
- if test x"$ac_file" != x-; then
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-echo "$as_me: $ac_file is unchanged" >&6;}
- else
- ac_dir=`(dirname "$ac_file") 2>/dev/null ||
-$as_expr X"$ac_file" : 'X\(.*[^/]\)//*[^/][^/]*/*$' \| \
- X"$ac_file" : 'X\(//\)[^/]' \| \
- X"$ac_file" : 'X\(//\)$' \| \
- X"$ac_file" : 'X\(/\)' \| \
- . : '\(.\)' 2>/dev/null ||
-echo X"$ac_file" |
- sed '/^X\(.*[^/]\)\/\/*[^/][^/]*\/*$/{ s//\1/; q; }
- /^X\(\/\/\)[^/].*/{ s//\1/; q; }
- /^X\(\/\/\)$/{ s//\1/; q; }
- /^X\(\/\).*/{ s//\1/; q; }
- s/.*/./; q'`
- { if $as_mkdir_p; then
- mkdir -p "$ac_dir"
- else
- as_dir="$ac_dir"
- as_dirs=
- while test ! -d "$as_dir"; do
- as_dirs="$as_dir $as_dirs"
- as_dir=`(dirname "$as_dir") 2>/dev/null ||
-$as_expr X"$as_dir" : 'X\(.*[^/]\)//*[^/][^/]*/*$' \| \
- X"$as_dir" : 'X\(//\)[^/]' \| \
- X"$as_dir" : 'X\(//\)$' \| \
- X"$as_dir" : 'X\(/\)' \| \
- . : '\(.\)' 2>/dev/null ||
-echo X"$as_dir" |
- sed '/^X\(.*[^/]\)\/\/*[^/][^/]*\/*$/{ s//\1/; q; }
- /^X\(\/\/\)[^/].*/{ s//\1/; q; }
- /^X\(\/\/\)$/{ s//\1/; q; }
- /^X\(\/\).*/{ s//\1/; q; }
- s/.*/./; q'`
- done
- test ! -n "$as_dirs" || mkdir $as_dirs
- fi || { { echo "$as_me:$LINENO: error: cannot create directory \"$ac_dir\"" >&5
-echo "$as_me: error: cannot create directory \"$ac_dir\"" >&2;}
- { (exit 1); exit 1; }; }; }
-
- rm -f $ac_file
- mv $tmp/config.h $ac_file
- fi
- else
- cat $tmp/config.h
- rm -f $tmp/config.h
- fi
-# Compute $ac_file's index in $config_headers.
-_am_stamp_count=1
-for _am_header in $config_headers :; do
- case $_am_header in
- $ac_file | $ac_file:* )
- break ;;
- * )
- _am_stamp_count=`expr $_am_stamp_count + 1` ;;
- esac
-done
-echo "timestamp for $ac_file" >`(dirname $ac_file) 2>/dev/null ||
-$as_expr X$ac_file : 'X\(.*[^/]\)//*[^/][^/]*/*$' \| \
- X$ac_file : 'X\(//\)[^/]' \| \
- X$ac_file : 'X\(//\)$' \| \
- X$ac_file : 'X\(/\)' \| \
- . : '\(.\)' 2>/dev/null ||
-echo X$ac_file |
- sed '/^X\(.*[^/]\)\/\/*[^/][^/]*\/*$/{ s//\1/; q; }
- /^X\(\/\/\)[^/].*/{ s//\1/; q; }
- /^X\(\/\/\)$/{ s//\1/; q; }
- /^X\(\/\).*/{ s//\1/; q; }
- s/.*/./; q'`/stamp-h$_am_stamp_count
-done
-_ACEOF
-cat >>$CONFIG_STATUS <<\_ACEOF
-
-#
-# CONFIG_COMMANDS section.
-#
-for ac_file in : $CONFIG_COMMANDS; do test "x$ac_file" = x: && continue
- ac_dest=`echo "$ac_file" | sed 's,:.*,,'`
- ac_source=`echo "$ac_file" | sed 's,[^:]*:,,'`
- ac_dir=`(dirname "$ac_dest") 2>/dev/null ||
-$as_expr X"$ac_dest" : 'X\(.*[^/]\)//*[^/][^/]*/*$' \| \
- X"$ac_dest" : 'X\(//\)[^/]' \| \
- X"$ac_dest" : 'X\(//\)$' \| \
- X"$ac_dest" : 'X\(/\)' \| \
- . : '\(.\)' 2>/dev/null ||
-echo X"$ac_dest" |
- sed '/^X\(.*[^/]\)\/\/*[^/][^/]*\/*$/{ s//\1/; q; }
- /^X\(\/\/\)[^/].*/{ s//\1/; q; }
- /^X\(\/\/\)$/{ s//\1/; q; }
- /^X\(\/\).*/{ s//\1/; q; }
- s/.*/./; q'`
- { if $as_mkdir_p; then
- mkdir -p "$ac_dir"
- else
- as_dir="$ac_dir"
- as_dirs=
- while test ! -d "$as_dir"; do
- as_dirs="$as_dir $as_dirs"
- as_dir=`(dirname "$as_dir") 2>/dev/null ||
-$as_expr X"$as_dir" : 'X\(.*[^/]\)//*[^/][^/]*/*$' \| \
- X"$as_dir" : 'X\(//\)[^/]' \| \
- X"$as_dir" : 'X\(//\)$' \| \
- X"$as_dir" : 'X\(/\)' \| \
- . : '\(.\)' 2>/dev/null ||
-echo X"$as_dir" |
- sed '/^X\(.*[^/]\)\/\/*[^/][^/]*\/*$/{ s//\1/; q; }
- /^X\(\/\/\)[^/].*/{ s//\1/; q; }
- /^X\(\/\/\)$/{ s//\1/; q; }
- /^X\(\/\).*/{ s//\1/; q; }
- s/.*/./; q'`
- done
- test ! -n "$as_dirs" || mkdir $as_dirs
- fi || { { echo "$as_me:$LINENO: error: cannot create directory \"$ac_dir\"" >&5
-echo "$as_me: error: cannot create directory \"$ac_dir\"" >&2;}
- { (exit 1); exit 1; }; }; }
-
- ac_builddir=.
-
-if test "$ac_dir" != .; then
- ac_dir_suffix=/`echo "$ac_dir" | sed 's,^\.[\\/],,'`
- # A "../" for each directory in $ac_dir_suffix.
- ac_top_builddir=`echo "$ac_dir_suffix" | sed 's,/[^\\/]*,../,g'`
-else
- ac_dir_suffix= ac_top_builddir=
-fi
-
-case $srcdir in
- .) # No --srcdir option. We are building in place.
- ac_srcdir=.
- if test -z "$ac_top_builddir"; then
- ac_top_srcdir=.
- else
- ac_top_srcdir=`echo $ac_top_builddir | sed 's,/$,,'`
- fi ;;
- [\\/]* | ?:[\\/]* ) # Absolute path.
- ac_srcdir=$srcdir$ac_dir_suffix;
- ac_top_srcdir=$srcdir ;;
- *) # Relative path.
- ac_srcdir=$ac_top_builddir$srcdir$ac_dir_suffix
- ac_top_srcdir=$ac_top_builddir$srcdir ;;
-esac
-
-# Do not use `cd foo && pwd` to compute absolute paths, because
-# the directories may not exist.
-case `pwd` in
-.) ac_abs_builddir="$ac_dir";;
-*)
- case "$ac_dir" in
- .) ac_abs_builddir=`pwd`;;
- [\\/]* | ?:[\\/]* ) ac_abs_builddir="$ac_dir";;
- *) ac_abs_builddir=`pwd`/"$ac_dir";;
- esac;;
-esac
-case $ac_abs_builddir in
-.) ac_abs_top_builddir=${ac_top_builddir}.;;
-*)
- case ${ac_top_builddir}. in
- .) ac_abs_top_builddir=$ac_abs_builddir;;
- [\\/]* | ?:[\\/]* ) ac_abs_top_builddir=${ac_top_builddir}.;;
- *) ac_abs_top_builddir=$ac_abs_builddir/${ac_top_builddir}.;;
- esac;;
-esac
-case $ac_abs_builddir in
-.) ac_abs_srcdir=$ac_srcdir;;
-*)
- case $ac_srcdir in
- .) ac_abs_srcdir=$ac_abs_builddir;;
- [\\/]* | ?:[\\/]* ) ac_abs_srcdir=$ac_srcdir;;
- *) ac_abs_srcdir=$ac_abs_builddir/$ac_srcdir;;
- esac;;
-esac
-case $ac_abs_builddir in
-.) ac_abs_top_srcdir=$ac_top_srcdir;;
-*)
- case $ac_top_srcdir in
- .) ac_abs_top_srcdir=$ac_abs_builddir;;
- [\\/]* | ?:[\\/]* ) ac_abs_top_srcdir=$ac_top_srcdir;;
- *) ac_abs_top_srcdir=$ac_abs_builddir/$ac_top_srcdir;;
- esac;;
-esac
-
-
- { echo "$as_me:$LINENO: executing $ac_dest commands" >&5
-echo "$as_me: executing $ac_dest commands" >&6;}
- case $ac_dest in
- depfiles ) test x"$AMDEP_TRUE" != x"" || for mf in $CONFIG_FILES; do
- # Strip MF so we end up with the name of the file.
- mf=`echo "$mf" | sed -e 's/:.*$//'`
- # Check whether this is an Automake generated Makefile or not.
- # We used to match only the files named `Makefile.in', but
- # some people rename them; so instead we look at the file content.
- # Grep'ing the first line is not enough: some people post-process
- # each Makefile.in and add a new line on top of each file to say so.
- # So let's grep whole file.
- if grep '^#.*generated by automake' $mf > /dev/null 2>&1; then
- dirpart=`(dirname "$mf") 2>/dev/null ||
-$as_expr X"$mf" : 'X\(.*[^/]\)//*[^/][^/]*/*$' \| \
- X"$mf" : 'X\(//\)[^/]' \| \
- X"$mf" : 'X\(//\)$' \| \
- X"$mf" : 'X\(/\)' \| \
- . : '\(.\)' 2>/dev/null ||
-echo X"$mf" |
- sed '/^X\(.*[^/]\)\/\/*[^/][^/]*\/*$/{ s//\1/; q; }
- /^X\(\/\/\)[^/].*/{ s//\1/; q; }
- /^X\(\/\/\)$/{ s//\1/; q; }
- /^X\(\/\).*/{ s//\1/; q; }
- s/.*/./; q'`
- else
- continue
- fi
- # Extract the definition of DEPDIR, am__include, and am__quote
- # from the Makefile without running `make'.
- DEPDIR=`sed -n 's/^DEPDIR = //p' < "$mf"`
- test -z "$DEPDIR" && continue
- am__include=`sed -n 's/^am__include = //p' < "$mf"`
- test -z "am__include" && continue
- am__quote=`sed -n 's/^am__quote = //p' < "$mf"`
- # When using ansi2knr, U may be empty or an underscore; expand it
- U=`sed -n 's/^U = //p' < "$mf"`
- # Find all dependency output files, they are included files with
- # $(DEPDIR) in their names. We invoke sed twice because it is the
- # simplest approach to changing $(DEPDIR) to its actual value in the
- # expansion.
- for file in `sed -n "
- s/^$am__include $am__quote\(.*(DEPDIR).*\)$am__quote"'$/\1/p' <"$mf" | \
- sed -e 's/\$(DEPDIR)/'"$DEPDIR"'/g' -e 's/\$U/'"$U"'/g'`; do
- # Make sure the directory exists.
- test -f "$dirpart/$file" && continue
- fdir=`(dirname "$file") 2>/dev/null ||
-$as_expr X"$file" : 'X\(.*[^/]\)//*[^/][^/]*/*$' \| \
- X"$file" : 'X\(//\)[^/]' \| \
- X"$file" : 'X\(//\)$' \| \
- X"$file" : 'X\(/\)' \| \
- . : '\(.\)' 2>/dev/null ||
-echo X"$file" |
- sed '/^X\(.*[^/]\)\/\/*[^/][^/]*\/*$/{ s//\1/; q; }
- /^X\(\/\/\)[^/].*/{ s//\1/; q; }
- /^X\(\/\/\)$/{ s//\1/; q; }
- /^X\(\/\).*/{ s//\1/; q; }
- s/.*/./; q'`
- { if $as_mkdir_p; then
- mkdir -p $dirpart/$fdir
- else
- as_dir=$dirpart/$fdir
- as_dirs=
- while test ! -d "$as_dir"; do
- as_dirs="$as_dir $as_dirs"
- as_dir=`(dirname "$as_dir") 2>/dev/null ||
-$as_expr X"$as_dir" : 'X\(.*[^/]\)//*[^/][^/]*/*$' \| \
- X"$as_dir" : 'X\(//\)[^/]' \| \
- X"$as_dir" : 'X\(//\)$' \| \
- X"$as_dir" : 'X\(/\)' \| \
- . : '\(.\)' 2>/dev/null ||
-echo X"$as_dir" |
- sed '/^X\(.*[^/]\)\/\/*[^/][^/]*\/*$/{ s//\1/; q; }
- /^X\(\/\/\)[^/].*/{ s//\1/; q; }
- /^X\(\/\/\)$/{ s//\1/; q; }
- /^X\(\/\).*/{ s//\1/; q; }
- s/.*/./; q'`
- done
- test ! -n "$as_dirs" || mkdir $as_dirs
- fi || { { echo "$as_me:$LINENO: error: cannot create directory $dirpart/$fdir" >&5
-echo "$as_me: error: cannot create directory $dirpart/$fdir" >&2;}
- { (exit 1); exit 1; }; }; }
-
- # echo "creating $dirpart/$file"
- echo '# dummy' > "$dirpart/$file"
- done
-done
- ;;
- esac
-done
-_ACEOF
-
-cat >>$CONFIG_STATUS <<\_ACEOF
-
-{ (exit 0); exit 0; }
-_ACEOF
-chmod +x $CONFIG_STATUS
-ac_clean_files=$ac_clean_files_save
-
-
-# configure is writing to config.log, and then calls config.status.
-# config.status does its own redirection, appending to config.log.
-# Unfortunately, on DOS this fails, as config.log is still kept open
-# by configure, so config.status won't be able to write to it; its
-# output is simply discarded. So we exec the FD to /dev/null,
-# effectively closing config.log, so it can be properly (re)opened and
-# appended to by config.status. When coming back to configure, we
-# need to make the FD available again.
-if test "$no_create" != yes; then
- ac_cs_success=:
- ac_config_status_args=
- test "$silent" = yes &&
- ac_config_status_args="$ac_config_status_args --quiet"
- exec 5>/dev/null
- $SHELL $CONFIG_STATUS $ac_config_status_args || ac_cs_success=false
- exec 5>>config.log
- # Use ||, not &&, to avoid exiting from the if with $? = 1, which
- # would make configure fail if this is the last instruction.
- $ac_cs_success || { (exit 1); exit 1; }
-fi
-
-# dump some configuration confirmations
-echo \
-"
--- ${PACKAGE_STRING} Configuration Results --
- C++ compiler: ${CXX} ${CXXFLAGS} ${LDFLAGS}"
-
-if test x"${GCC}" = x"yes" ; then
- gcc_version=`${CC} --version | head -n 1`
- echo " GCC version: ${gcc_version}"
-else
- gcc_version=''
-fi
-
-echo \
-" Host System type: ${host}
- Install prefix: ${prefix}
- Install eprefix: ${exec_prefix}
-
- See config.h for further configuration information.
- Email <${PACKAGE_BUGREPORT}> with questions and bug reports.
-"
-
-if test x"${PYTHON}" = x":" || ! test -x "${PYTHON}"; then
- echo "WARNING! python was not found and is required to run some utility scripts"
- echo " We recommend installing python and pointing configure to the installed location"
-fi
-
--
Transcript assembly, differential expression, and differential regulation for RNA-Seq.
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