[med-svn] [SCM] cufflinks branch, master, updated. debian/1.3.0-1-8-g36e7d88

[Charles Plessy]

The following commit has been merged in the master branch:
commit 609546ffa6636a3b12ace89de64082da47d233b0
Author: Charles Plessy <plessy at debian.org>
Date:   Wed May 9 07:59:27 2012 +0900

    Normalised with config-edit.

diff --git a/debian/copyright b/debian/copyright
index fc88ac3..586448c 100644
--- a/debian/copyright
+++ b/debian/copyright
@@ -1,6 +1,6 @@
-Format: http://dep.debian.net/deps/dep5
-Source: http://cufflinks.cbcb.umd.edu/downloads/cufflinks-1.3.0.tar.gz
+Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
 Upstream-Contact: tophat.cufflinks at gmail.com.
+Source: http://cufflinks.cbcb.umd.edu/downloads/cufflinks-1.3.0.tar.gz
 Disclamer: This package is not part of the Debian operating system.
  The cufflinks source and binary Debian packages are part of the “non-free” area
  in our archive. The packages in this area are not part of the Debian system,
@@ -28,12 +28,11 @@ License: GAP
 Files: ax_boost_base.m4 ax_boost_thread.m4
 Copyright: © 2008,2009 Thomas Porschberg <thomas at randspringer.de>
  © 2009 Michael Tindal
-Source: http://autoconf-archive.cryp.to/
 License: GAP
+Source: http://autoconf-archive.cryp.to/
 
 Files: ax_check_zlib.m4
 Copyright: © 2008 Loic Dachary <loic at senga.org>
-Source: http://www.gnu.org/software/autoconf-archive/ax_check_zlib.html
 License: GPL-2+_with_Autoconf_exception
  This program is free software; you can redistribute it and/or modify it
  under the terms of the GNU General Public License as published by the
@@ -62,9 +61,9 @@ License: GPL-2+_with_Autoconf_exception
  exception to the GPL to apply to your modified version as well.
 Comment: On Debian systems, the full text of the GNU General Public
  license version 2 can be consulted in ‘/usr/share/common-licenses/GPL-2’.
+Source: http://www.gnu.org/software/autoconf-archive/ax_check_zlib.html
 
 Files: src/lemon/*
-Source: http://lemon.cs.elte.hu/trac/lemon
 Copyright: © 2003-2008 Egervary Jeno Kombinatorikus Optimalizalasi Kutatocsoport (Egervary Research Group on Combinatorial Optimization, EGRES)
  © 2003 The Trustees of Indiana University
  © Jeremy Siek 2000
@@ -86,11 +85,11 @@ Comment: The files contain the following header:
  .
  The license file at http://lemon.cs.elte.hu/trac/lemon/browser indicates
  the Boost Software License, Version 1.0.
+Source: http://lemon.cs.elte.hu/trac/lemon
 
 Files: src/locfit/*
 Copyright: © 1996-2001 Lucent Technologies, Bell Laboratories.
  © 1996-2001 Catherine Loader.
-Source: http://stat.bell-labs.com/project/locfit
 License: Locfit
   ABOUT ALGORITHMS:
  The Locfit implementation has been designed largely from the point
@@ -130,6 +129,7 @@ License: Locfit
 Comment: the files contain “See README file for details.” and the license
  displayed above is from the README file of the locfit source available at
  http://stat.bell-labs.com/project/locfit/dist/locfit.tgz
+Source: http://stat.bell-labs.com/project/locfit
 
 Files: debian/*
 Copyright: 2011 Alex Mestiashvili <alex at biotec.tu-dresden.de>
@@ -166,3 +166,4 @@ License: GAP
  and this notice are preserved.
 Comment: GAP stands for GNU All Permissive, see:
  http://www.gnu.org/s/hello/manual/texinfo/All_002dpermissive-Copying-License.html
+

-- 
Transcript assembly, differential expression, and differential regulation for RNA-Seq.