[med-svn] [SCM] bowtie2 branch, master, updated. upstream/2.0.0-beta5-22-gf8cec87

[Alexandre Mestiashvili]

The following commit has been merged in the master branch:
commit 7814d8dd094102bcd80c5dd0ef3e5254b48f70c8
Author: Alexandre Mestiashvili <alex at biotec.tu-dresden.de>
Date:   Fri May 11 08:36:20 2012 +0200

    updated debian/watch and get-orig-source to track -source suffix

diff --git a/debian/get-orig-source b/debian/get-orig-source
index 0495eb3..95bfe88 100755
--- a/debian/get-orig-source
+++ b/debian/get-orig-source
@@ -6,4 +6,4 @@ PKG=`dpkg-parsechangelog | awk '/^Source/ { print $2 }'`
 VERSION=`uscan --verbose --force-download  --repack --destdir ../tarballs| \
     grep "Newest version on remote site is .* local version is .*" | \
     head -n 1 | \
-    sed "s/Newest version on remote site is \([0-9\.]\+-beta[0-9]\+\),.*/\1/"`
+    sed "s/Newest version on remote site is \([0-9\.]\+-beta[0-9]\+\)-source,.*/\1/"`
diff --git a/debian/watch b/debian/watch
index 1c58a2e..d2c6f8a 100644
--- a/debian/watch
+++ b/debian/watch
@@ -1,3 +1,4 @@
 version=3
 
-http://sf.net/bowtie-bio/bowtie2-([\d\.]+\-beta\d)\.zip
+opts=filenamemangle=s/(.*)(-source)(\..*$)/$1$3/\
+	http://sf.net/bowtie-bio/bowtie2-([\d\.]+\-beta\d)\-source\.zip

-- 
ultrafast memory-efficient short read aligner