[med-svn] r12508 - trunk/packages/phyloviz/core/trunk/debian

[Andreas Tille]

Author: tille
Date: 2012-11-07 15:02:36 +0000 (Wed, 07 Nov 2012)
New Revision: 12508

Added:
   trunk/packages/phyloviz/core/trunk/debian/copyright
   trunk/packages/phyloviz/core/trunk/debian/upstream
Log:
Somehow two files were missing in SVN


Added: trunk/packages/phyloviz/core/trunk/debian/copyright
===================================================================
--- trunk/packages/phyloviz/core/trunk/debian/copyright	                        (rev 0)
+++ trunk/packages/phyloviz/core/trunk/debian/copyright	2012-11-07 15:02:36 UTC (rev 12508)
@@ -0,0 +1,61 @@
+Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Upstream-Name: PHYLOViZ Core
+Upstream-Contact: PHYLOViZ Team <phyloviz at gmail.com>
+Source: http://www.phyloviz.net/sources/net-phyloviz-core.tar.gz
+
+Files: *
+Copyright: © 2011, PHYLOViZ Team <phyloviz at gmail.com>
+License: GPL-3
+
+Files: *.java
+Copyright: © 2011, PHYLOViZ Team <phyloviz at gmail.com>
+License: GPL-3-classpath-exception
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+ .
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+ GNU General Public License for more details.
+ .
+ On Debian systems you can find a copy of the GNU General Public License
+ version 3 at /usr/share/common-licenses/GPL-3
+ .
+ The *.java source files distributed by the PHYLOViZ Team are under the
+ terms of the GNU General Public License Version 3 with the following
+ clarification and special exception:
+ .
+ Linking this library statically or dynamically with other modules is
+ making a combined work based on this library.  Thus, the terms and
+ conditions of the GNU General Public License cover the whole combination.
+ .
+ As a special exception, the copyright holders of this library give you
+ permission to link this library with independent modules to produce an
+ executable, regardless of the license terms of these independent modules,
+ and to copy and distribute the resulting executable under terms of your
+ choice, provided that you also meet, for each linked independent module,
+ the terms and conditions of the license of that module.  An independent
+ module is a module which is not derived from or based on this library.
+ If you modify this library, you may extend this exception to your version
+ of the library, but you are not obligated to do so.  If you do not wish
+ to do so, delete this exception statement from your version.
+
+Files: debian/*
+Copyright: © 2012 Andreas Tille <tille at debian.org>
+License: GPL-3
+
+License: GPL-3
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+ .
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+ GNU General Public License for more details.
+ .
+ On Debian systems you can find a copy of the GNU General Public License
+ version 3 at /usr/share/common-licenses/GPL-3

Added: trunk/packages/phyloviz/core/trunk/debian/upstream
===================================================================
--- trunk/packages/phyloviz/core/trunk/debian/upstream	                        (rev 0)
+++ trunk/packages/phyloviz/core/trunk/debian/upstream	2012-11-07 15:02:36 UTC (rev 12508)
@@ -0,0 +1,12 @@
+Reference:
+  Author: Alexandre P Francisco and Cátia Vaz and Pedro T Monteiro and José Melo-Cristino and Mário Ramirez and João A Carriço
+  Title: "PHYLOViZ: phylogenetic inference and data visualization for sequence based typing methods"
+  Journal: BMC Bioinformatics
+  Year: 2012
+  Volume: 13
+  Number: 1
+  Pages: 87
+  DOI: 10.1186/1471-2105-13-87
+  PMID: 22568821
+  URL: http://www.biomedcentral.com/1471-2105/13/87/abstract
+  eprint: http://www.biomedcentral.com/content/pdf/1471-2105-13-87.pdf