[med-svn] r15056 - in trunk/packages/R: r-bioc-biovizbase/trunk/debian r-bioc-bsgenome/trunk/debian

[Andreas Tille]

Author: tille
Date: 2013-10-30 07:20:22 +0000 (Wed, 30 Oct 2013)
New Revision: 15056

Modified:
   trunk/packages/R/r-bioc-biovizbase/trunk/debian/changelog
   trunk/packages/R/r-bioc-biovizbase/trunk/debian/control
   trunk/packages/R/r-bioc-bsgenome/trunk/debian/changelog
   trunk/packages/R/r-bioc-bsgenome/trunk/debian/control
Log:
Add newly available dependency r-bioc-genomicranges to some packages


Modified: trunk/packages/R/r-bioc-biovizbase/trunk/debian/changelog
===================================================================
--- trunk/packages/R/r-bioc-biovizbase/trunk/debian/changelog	2013-10-30 07:13:33 UTC (rev 15055)
+++ trunk/packages/R/r-bioc-biovizbase/trunk/debian/changelog	2013-10-30 07:20:22 UTC (rev 15056)
@@ -2,7 +2,6 @@
 
   * Initial release (closes: #???)
     TODO: Dependencies
-      GenomicRanges:   svn://anonscm.debian.org/debian-med/trunk/packages/R/r-bioc-genomicranges/trunk/ (uploaded to new)
       Rsamtools:       svn://anonscm.debian.org/debian-med/trunk/packages/R/r-bioc-rsamtools/trunk/
       GenomicFeatures: svn://anonscm.debian.org/debian-med/trunk/packages/R/r-bioc-genomicfeatures/trunk/
 

Modified: trunk/packages/R/r-bioc-biovizbase/trunk/debian/control
===================================================================
--- trunk/packages/R/r-bioc-biovizbase/trunk/debian/control	2013-10-30 07:13:33 UTC (rev 15055)
+++ trunk/packages/R/r-bioc-biovizbase/trunk/debian/control	2013-10-30 07:20:22 UTC (rev 15056)
@@ -12,7 +12,8 @@
                r-cran-scales,
                r-bioc-biobase,
                r-bioc-iranges,
-               r-bioc-biostrings
+               r-bioc-biostrings,
+               r-bioc-genomicranges
 Standards-Version: 3.9.4
 Vcs-Browser: http://anonscm.debian.org/viewvc/debian-med/trunk/packages/R/r-bioc-biovizbase/trunk/
 Vcs-Svn: svn://anonscm.debian.org/debian-med/trunk/packages/R/r-bioc-biovizbase/trunk/
@@ -28,7 +29,8 @@
          r-cran-scales,
          r-bioc-biobase,
          r-bioc-iranges,
-         r-bioc-biostrings
+         r-bioc-biostrings,
+         r-bioc-genomicranges
 Description: GNU R basic graphic utilities for visualization of genomic data
  The biovizBase package is designed to provide a set of utilities, color
  schemes and conventions for genomic data. It serves as the base for

Modified: trunk/packages/R/r-bioc-bsgenome/trunk/debian/changelog
===================================================================
--- trunk/packages/R/r-bioc-bsgenome/trunk/debian/changelog	2013-10-30 07:13:33 UTC (rev 15055)
+++ trunk/packages/R/r-bioc-bsgenome/trunk/debian/changelog	2013-10-30 07:20:22 UTC (rev 15056)
@@ -1,7 +1,5 @@
 r-bioc-bsgenome (1.28.0-1) unstable; urgency=low
 
   * Initial release (closes: #?????)
-    TODO: Dependencies
-      GenomicRanges: svn://anonscm.debian.org/debian-med/trunk/packages/R/r-bioc-genomicranges/trunk/ (uploaded to new)
 
  -- Andreas Tille <tille at debian.org>  Fri, 23 Aug 2013 09:23:02 +0200

Modified: trunk/packages/R/r-bioc-bsgenome/trunk/debian/control
===================================================================
--- trunk/packages/R/r-bioc-bsgenome/trunk/debian/control	2013-10-30 07:13:33 UTC (rev 15055)
+++ trunk/packages/R/r-bioc-bsgenome/trunk/debian/control	2013-10-30 07:20:22 UTC (rev 15056)
@@ -7,7 +7,8 @@
                cdbs,
                r-base-dev,
                r-bioc-iranges,
-               r-bioc-biostrings
+               r-bioc-biostrings,
+               r-bioc-genomicranges
 Standards-Version: 3.9.4
 Vcs-Browser: http://anonscm.debian.org/viewvc/debian-med/trunk/packages/R/r-bioc-bsgenome/trunk/
 Vcs-Svn: svn://anonscm.debian.org/debian-med/trunk/packages/R/r-bioc-bsgenome/trunk/
@@ -19,7 +20,8 @@
          ${shlibs:Depends},
          ${misc:Depends},
          r-bioc-iranges,
-         r-bioc-biostrings
+         r-bioc-biostrings,
+         r-bioc-genomicranges
 Description: BioConductor infrastructure for Biostrings-based genome data packages
  This BioConductor module provides some basic infrastructure for
  Biostrings-based genome data packages.