[med-svn] [bedtools] 03/14: added: mm10 mouse genome

Charles Plessy plessy at moszumanska.debian.org
Thu Mar 6 22:56:44 UTC 2014


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plessy pushed a commit to branch master
in repository bedtools.

commit a70cc3056f6d9270070f2aa3d5639c09f4302771
Author: Paul Rigor <paul.rigor at uci.edu>
Date:   Sun Feb 23 08:30:28 2014 -0800

    added: mm10 mouse genome
---
 genomes/mouse.mm10.genome.txt | 66 +++++++++++++++++++++++++++++++++++++++++++
 1 file changed, 66 insertions(+)

diff --git a/genomes/mouse.mm10.genome.txt b/genomes/mouse.mm10.genome.txt
new file mode 100644
index 0000000..43b9f6c
--- /dev/null
+++ b/genomes/mouse.mm10.genome.txt
@@ -0,0 +1,66 @@
+chr1 195471971
+chr2 182113224
+chr3 160039680
+chr4 156508116
+chr5 151834684
+chr6 149736546
+chr7 145441459
+chr8 129401213
+chr9 124595110
+chr10        130694993
+chr11        122082543
+chr12        120129022
+chr13        120421639
+chr14        124902244
+chr15        104043685
+chr16        98207768
+chr17        94987271
+chr18        90702639
+chr19        61431566
+chrX 171031299
+chrY 91744698
+chrM 16299
+chr1_GL456210_random 169725
+chr1_GL456211_random 241735
+chr1_GL456212_random 153618
+chr1_GL456213_random 39340
+chr1_GL456221_random 206961
+chr4_GL456216_random 66673
+chr4_GL456350_random 227966
+chr4_JH584292_random 14945
+chr4_JH584293_random 207968
+chr4_JH584294_random 191905
+chr4_JH584295_random 1976
+chr5_GL456354_random 195993
+chr5_JH584296_random 199368
+chr5_JH584297_random 205776
+chr5_JH584298_random 184189
+chr5_JH584299_random 953012
+chr7_GL456219_random 175968
+chrUn_GL456239       40056
+chrUn_GL456359       22974
+chrUn_GL456360       31704
+chrUn_GL456366       47073
+chrUn_GL456367       42057
+chrUn_GL456368       20208
+chrUn_GL456370       26764
+chrUn_GL456372       28664
+chrUn_GL456378       31602
+chrUn_GL456379       72385
+chrUn_GL456381       25871
+chrUn_GL456382       23158
+chrUn_GL456383       38659
+chrUn_GL456385       35240
+chrUn_GL456387       24685
+chrUn_GL456389       28772
+chrUn_GL456390       24668
+chrUn_GL456392       23629
+chrUn_GL456393       55711
+chrUn_GL456394       24323
+chrUn_GL456396       21240
+chrUn_JH584304       114452
+chrX_GL456233_random 336933
+chrY_JH584300_random 182347
+chrY_JH584301_random 259875
+chrY_JH584302_random 155838
+chrY_JH584303_random 158099

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