[med-svn] r18014 - in trunk/packages/rostlab/libzerg/tags: . 1.0.7-6/debian
Laszlo Kajan
lkajan at moszumanska.debian.org
Sun Sep 14 10:00:51 UTC 2014
Author: lkajan
Date: 2014-09-14 10:00:51 +0000 (Sun, 14 Sep 2014)
New Revision: 18014
Added:
trunk/packages/rostlab/libzerg/tags/1.0.7-6/
trunk/packages/rostlab/libzerg/tags/1.0.7-6/debian/changelog
trunk/packages/rostlab/libzerg/tags/1.0.7-6/debian/control
trunk/packages/rostlab/libzerg/tags/1.0.7-6/debian/copyright
trunk/packages/rostlab/libzerg/tags/1.0.7-6/debian/libzerg0.symbols
trunk/packages/rostlab/libzerg/tags/1.0.7-6/debian/rules
Removed:
trunk/packages/rostlab/libzerg/tags/1.0.7-6/debian/changelog
trunk/packages/rostlab/libzerg/tags/1.0.7-6/debian/control
trunk/packages/rostlab/libzerg/tags/1.0.7-6/debian/copyright
trunk/packages/rostlab/libzerg/tags/1.0.7-6/debian/rules
Log:
[svn-buildpackage] Tagging libzerg 1.0.7-6
Deleted: trunk/packages/rostlab/libzerg/tags/1.0.7-6/debian/changelog
===================================================================
--- trunk/packages/rostlab/libzerg/trunk/debian/changelog 2014-09-13 19:43:07 UTC (rev 18007)
+++ trunk/packages/rostlab/libzerg/tags/1.0.7-6/debian/changelog 2014-09-14 10:00:51 UTC (rev 18014)
@@ -1,51 +0,0 @@
-libzerg (1.0.7-5) unstable; urgency=low
-
- * [Andreas Tille] debian/upstream:
- - Added URL + eprint
- - Moved DOI to references
- - Make author field BibTeX compliant
-
- [Laszlo Kajan]
- * Removing non-policy-compliant get-orig-source target from debian/rules.
-
- -- Laszlo Kajan <lkajan at rostlab.org> Fri, 06 Jul 2012 15:35:05 +0200
-
-libzerg (1.0.7-4) unstable; urgency=low
-
- * Fixed svn-buildpackage issue on unstable by saving original make file
- in Makefile.libzerg-orig
- * Revised description.
- * Mention librostlab-blast as a parser option.
-
- -- Laszlo Kajan <lkajan at rostlab.org> Fri, 20 Jan 2012 14:26:44 +0100
-
-libzerg (1.0.7-3) unstable; urgency=low
-
- [ Laszlo Kajan ]
- * Tille: debian/upstream-metadata.yaml: Added some missing fields
- Tue, 10 Jan 2012 08:30:18 +0100
- * Kajan: Renamed libzerg-dev to libzerg0-dev, Provides: libzerg-dev
- * Renamed libzerg-dbg to libzerg0-dbg.
- * dh build now, no more CDBS, with dh-autoreconf.
- * No more debian-changes patches.
-
- [ Andreas Tille ]
- * debian/patches/save_makefile.patch
- - Make sure original Makefile can be restored
- * debian/rules: Fixed clean target
-
- -- Andreas Tille <tille at debian.org> Wed, 18 Jan 2012 13:35:10 +0100
-
-libzerg (1.0.7-2) unstable; urgency=low
-
- * Patched lexer to handle blastpgp [2.2.18] output.
-
- -- Laszlo Kajan <lkajan at rostlab.org> Tue, 20 Sep 2011 10:51:18 +0200
-
-libzerg (1.0.7-1) unstable; urgency=low
-
- * Initial release (Closes: #641581)
- * Pached to build with autotools and libtools allowing for a shared library
- as well as the static
-
- -- Laszlo Kajan <lkajan at rostlab.org> Wed, 14 Sep 2011 15:29:37 +0200
Copied: trunk/packages/rostlab/libzerg/tags/1.0.7-6/debian/changelog (from rev 18012, trunk/packages/rostlab/libzerg/trunk/debian/changelog)
===================================================================
--- trunk/packages/rostlab/libzerg/tags/1.0.7-6/debian/changelog (rev 0)
+++ trunk/packages/rostlab/libzerg/tags/1.0.7-6/debian/changelog 2014-09-14 10:00:51 UTC (rev 18014)
@@ -0,0 +1,59 @@
+libzerg (1.0.7-6) unstable; urgency=medium
+
+ * Updated standards version.
+ * Corrected Vcs-Browser field.
+ * Corrected location of d/upstream/metadata.
+
+ -- Laszlo Kajan <lkajan at debian.org> Sun, 14 Sep 2014 10:57:49 +0200
+
+libzerg (1.0.7-5) unstable; urgency=low
+
+ * [Andreas Tille] debian/upstream:
+ - Added URL + eprint
+ - Moved DOI to references
+ - Make author field BibTeX compliant
+
+ [Laszlo Kajan]
+ * Removing non-policy-compliant get-orig-source target from debian/rules.
+
+ -- Laszlo Kajan <lkajan at rostlab.org> Fri, 06 Jul 2012 15:35:05 +0200
+
+libzerg (1.0.7-4) unstable; urgency=low
+
+ * Fixed svn-buildpackage issue on unstable by saving original make file
+ in Makefile.libzerg-orig
+ * Revised description.
+ * Mention librostlab-blast as a parser option.
+
+ -- Laszlo Kajan <lkajan at rostlab.org> Fri, 20 Jan 2012 14:26:44 +0100
+
+libzerg (1.0.7-3) unstable; urgency=low
+
+ [ Laszlo Kajan ]
+ * Tille: debian/upstream-metadata.yaml: Added some missing fields
+ Tue, 10 Jan 2012 08:30:18 +0100
+ * Kajan: Renamed libzerg-dev to libzerg0-dev, Provides: libzerg-dev
+ * Renamed libzerg-dbg to libzerg0-dbg.
+ * dh build now, no more CDBS, with dh-autoreconf.
+ * No more debian-changes patches.
+
+ [ Andreas Tille ]
+ * debian/patches/save_makefile.patch
+ - Make sure original Makefile can be restored
+ * debian/rules: Fixed clean target
+
+ -- Andreas Tille <tille at debian.org> Wed, 18 Jan 2012 13:35:10 +0100
+
+libzerg (1.0.7-2) unstable; urgency=low
+
+ * Patched lexer to handle blastpgp [2.2.18] output.
+
+ -- Laszlo Kajan <lkajan at rostlab.org> Tue, 20 Sep 2011 10:51:18 +0200
+
+libzerg (1.0.7-1) unstable; urgency=low
+
+ * Initial release (Closes: #641581)
+ * Pached to build with autotools and libtools allowing for a shared library
+ as well as the static
+
+ -- Laszlo Kajan <lkajan at rostlab.org> Wed, 14 Sep 2011 15:29:37 +0200
Deleted: trunk/packages/rostlab/libzerg/tags/1.0.7-6/debian/control
===================================================================
--- trunk/packages/rostlab/libzerg/trunk/debian/control 2014-09-13 19:43:07 UTC (rev 18007)
+++ trunk/packages/rostlab/libzerg/tags/1.0.7-6/debian/control 2014-09-14 10:00:51 UTC (rev 18014)
@@ -1,58 +0,0 @@
-Source: libzerg
-Section: science
-Priority: extra
-Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
-Uploaders: Laszlo Kajan <lkajan at rostlab.org>,
- Andreas Tille <tille at debian.org>
-Build-Depends: debhelper (>= 7.0.50~), dh-autoreconf, flex, perl
-Standards-Version: 3.9.3
-Vcs-Svn: svn://svn.debian.org/debian-med/trunk/packages/rostlab/libzerg/trunk/
-Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/rostlab/libzerg/trunk/
-DM-Upload-Allowed: yes
-Homepage: http://code.google.com/p/libzerg/
-
-Package: libzerg0
-Architecture: any
-Section: libs
-Depends: ${shlibs:Depends}, ${misc:Depends}
-Description: C library for lexically scanning the output of NCBI BLAST programs
- Zerg is a C library for lexing - lexically scanning - the output of NCBI
- BLAST programs.
- .
- Based on a
- GNU Flex-generated lexical scanner, it runs extremely fast, being especially
- useful for processing large volumes of data. Benchmark tests show that Zerg
- is over two orders of magnitude faster than some widely used BLAST parsers.
- .
- If you need a parser and not only a lexer, check out librostlab-blast.
- .
- This package contains the shared library.
-
-Package: libzerg0-dev
-Architecture: any
-Section: libdevel
-Depends: libzerg0 (= ${binary:Version}), ${misc:Depends}
-Provides: libzerg-dev
-Description: development libraries and header files for libzerg
- Zerg is a C library for lexing - lexically scanning - the output of NCBI
- BLAST programs.
- .
- Based on a
- GNU Flex-generated lexical scanner, it runs extremely fast, being especially
- useful for processing large volumes of data. Benchmark tests show that Zerg
- is over two orders of magnitude faster than some widely used BLAST parsers.
- .
- If you need a parser and not only a lexer, check out librostlab-blast.
- .
- This package contains the header files and documentation
- needed to develop applications with libzerg.
-
-Package: libzerg0-dbg
-Architecture: any
-Section: debug
-Depends: libzerg0 (= ${binary:Version}), ${misc:Depends}
-Description: debugging symbols for libzerg
- Zerg is a C library for lexing - lexically scanning - the output of NCBI
- BLAST programs.
- .
- This package provides the detached debug symbols.
Copied: trunk/packages/rostlab/libzerg/tags/1.0.7-6/debian/control (from rev 18012, trunk/packages/rostlab/libzerg/trunk/debian/control)
===================================================================
--- trunk/packages/rostlab/libzerg/tags/1.0.7-6/debian/control (rev 0)
+++ trunk/packages/rostlab/libzerg/tags/1.0.7-6/debian/control 2014-09-14 10:00:51 UTC (rev 18014)
@@ -0,0 +1,57 @@
+Source: libzerg
+Section: science
+Priority: extra
+Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
+Uploaders: Laszlo Kajan <lkajan at debian.org>,
+ Andreas Tille <tille at debian.org>
+Build-Depends: debhelper (>= 7.0.50~), dh-autoreconf, flex, perl
+Standards-Version: 3.9.5
+Vcs-Svn: svn://anonscm.debian.org/debian-med/trunk/packages/rostlab/libzerg/trunk/
+Vcs-Browser: http://anonscm.debian.org/viewvc/debian-med/trunk/packages/rostlab/libzerg/trunk/
+Homepage: http://code.google.com/p/libzerg/
+
+Package: libzerg0
+Architecture: any
+Section: libs
+Depends: ${shlibs:Depends}, ${misc:Depends}
+Description: C library for lexically scanning the output of NCBI BLAST programs
+ Zerg is a C library for lexing - lexically scanning - the output of NCBI
+ BLAST programs.
+ .
+ Based on a
+ GNU Flex-generated lexical scanner, it runs extremely fast, being especially
+ useful for processing large volumes of data. Benchmark tests show that Zerg
+ is over two orders of magnitude faster than some widely used BLAST parsers.
+ .
+ If you need a parser and not only a lexer, check out librostlab-blast.
+ .
+ This package contains the shared library.
+
+Package: libzerg0-dev
+Architecture: any
+Section: libdevel
+Depends: libzerg0 (= ${binary:Version}), ${misc:Depends}
+Provides: libzerg-dev
+Description: development libraries and header files for libzerg
+ Zerg is a C library for lexing - lexically scanning - the output of NCBI
+ BLAST programs.
+ .
+ Based on a
+ GNU Flex-generated lexical scanner, it runs extremely fast, being especially
+ useful for processing large volumes of data. Benchmark tests show that Zerg
+ is over two orders of magnitude faster than some widely used BLAST parsers.
+ .
+ If you need a parser and not only a lexer, check out librostlab-blast.
+ .
+ This package contains the header files and documentation
+ needed to develop applications with libzerg.
+
+Package: libzerg0-dbg
+Architecture: any
+Section: debug
+Depends: libzerg0 (= ${binary:Version}), ${misc:Depends}
+Description: debugging symbols for libzerg
+ Zerg is a C library for lexing - lexically scanning - the output of NCBI
+ BLAST programs.
+ .
+ This package provides the detached debug symbols.
Deleted: trunk/packages/rostlab/libzerg/tags/1.0.7-6/debian/copyright
===================================================================
--- trunk/packages/rostlab/libzerg/trunk/debian/copyright 2014-09-13 19:43:07 UTC (rev 18007)
+++ trunk/packages/rostlab/libzerg/tags/1.0.7-6/debian/copyright 2014-09-14 10:00:51 UTC (rev 18014)
@@ -1,40 +0,0 @@
-This work was packaged for Debian by:
-
- Laszlo Kajan <lkajan at rostlab.org> on Wed, 14 Sep 2011 15:29:37 +0200
-
-It was downloaded from:
-
- http://code.google.com/p/libzerg/
-
-Upstream Author:
-
- Apuã Paquola <apuapaquola at gmail.com>
-
-Copyright:
-
- Copyright (C) 2002 Apuã Paquola - Instituto de Química - Universidade de São Paulo - Brasil
-
-License:
-
- This program is free software: you can redistribute it and/or modify
- it under the terms of the GNU General Public License as published by
- the Free Software Foundation, either version 2 of the License, or
- (at your option) any later version.
-
- This package is distributed in the hope that it will be useful,
- but WITHOUT ANY WARRANTY; without even the implied warranty of
- MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
- GNU General Public License for more details.
-
- You should have received a copy of the GNU General Public License
- along with this program. If not, see <http://www.gnu.org/licenses/>.
-
-On Debian systems, the complete text of the GNU General
-Public License version 2 can be found in `/usr/share/common-licenses/GPL-2'.
-
-The Debian packaging is:
-
- Copyright (C) 2011 Laszlo Kajan <lkajan at rostlab.org>
-
-and is licensed under the GPL version 3,
-see "/usr/share/common-licenses/GPL-3".
Copied: trunk/packages/rostlab/libzerg/tags/1.0.7-6/debian/copyright (from rev 18012, trunk/packages/rostlab/libzerg/trunk/debian/copyright)
===================================================================
--- trunk/packages/rostlab/libzerg/tags/1.0.7-6/debian/copyright (rev 0)
+++ trunk/packages/rostlab/libzerg/tags/1.0.7-6/debian/copyright 2014-09-14 10:00:51 UTC (rev 18014)
@@ -0,0 +1,30 @@
+Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Upstream-Name: libzerg
+Upstream-Contact: Apuã Paquola <apuapaquola at gmail.com>
+Source: http://code.google.com/p/libzerg/
+
+Files: debian/*
+Copyright: 2011 Laszlo Kajan <lkajan at rostlab.org>
+License: GPL-2.0+
+
+Files: *
+Copyright: 2002 Apuã Paquola - Instituto de Química - Universidade de São Paulo - Brasil
+License: GPL-2.0+
+
+License: GPL-2.0+
+ This program is free software; you can redistribute it and/or
+ modify it under the terms of the GNU General Public License
+ as published by the Free Software Foundation; either version 2
+ of the License, or (at your option) any later version.
+ .
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU General Public License for more details.
+ .
+ You should have received a copy of the GNU General Public License
+ along with this program; if not, write to the Free Software
+ Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA.
+ .
+ On Debian systems, the complete text of the GNU General
+ Public License version 2 can be found in "/usr/share/common-licenses/GPL-2".
Copied: trunk/packages/rostlab/libzerg/tags/1.0.7-6/debian/libzerg0.symbols (from rev 18012, trunk/packages/rostlab/libzerg/trunk/debian/libzerg0.symbols)
===================================================================
--- trunk/packages/rostlab/libzerg/tags/1.0.7-6/debian/libzerg0.symbols (rev 0)
+++ trunk/packages/rostlab/libzerg/tags/1.0.7-6/debian/libzerg0.symbols 2014-09-14 10:00:51 UTC (rev 18014)
@@ -0,0 +1,41 @@
+libzerg.so.0 libzerg0 #MINVER#
+ zerg_close_file at Base 1.0.7
+ zerg_create_buffer at Base 1.0.7
+ zerg_delete_buffer at Base 1.0.7
+ zerg_flex_debug at Base 1.0.7
+ zerg_flush_buffer at Base 1.0.7
+ zerg_get_token at Base 1.0.7
+ zerg_get_token_offset at Base 1.0.7
+ zerg_ignore at Base 1.0.7
+ zerg_ignore_all at Base 1.0.7
+ zerg_open_file at Base 1.0.7
+ zerg_read_stream at Base 1.0.7
+ zerg_scan_buffer at Base 1.0.7
+ zerg_scan_bytes at Base 1.0.7
+ zerg_scan_string at Base 1.0.7
+ zerg_switch_to_buffer at Base 1.0.7
+ zerg_unignore at Base 1.0.7
+ zerg_unignore_all at Base 1.0.7
+ zergalloc at Base 1.0.7
+ zergfree at Base 1.0.7
+ zergget_debug at Base 1.0.7
+ zergget_in at Base 1.0.7
+ zergget_leng at Base 1.0.7
+ zergget_lineno at Base 1.0.7
+ zergget_out at Base 1.0.7
+ zergget_text at Base 1.0.7
+ zergin at Base 1.0.7
+ zergleng at Base 1.0.7
+ zerglex at Base 1.0.7
+ zerglex_destroy at Base 1.0.7
+ zerglineno at Base 1.0.7
+ zergout at Base 1.0.7
+ zergpop_buffer_state at Base 1.0.7
+ zergpush_buffer_state at Base 1.0.7
+ zergrealloc at Base 1.0.7
+ zergrestart at Base 1.0.7
+ zergset_debug at Base 1.0.7
+ zergset_in at Base 1.0.7
+ zergset_lineno at Base 1.0.7
+ zergset_out at Base 1.0.7
+ zergtext at Base 1.0.7
Deleted: trunk/packages/rostlab/libzerg/tags/1.0.7-6/debian/rules
===================================================================
--- trunk/packages/rostlab/libzerg/trunk/debian/rules 2014-09-13 19:43:07 UTC (rev 18007)
+++ trunk/packages/rostlab/libzerg/tags/1.0.7-6/debian/rules 2014-09-14 10:00:51 UTC (rev 18014)
@@ -1,21 +0,0 @@
-#!/usr/bin/make -f
-
-export CPPFLAGS:=$(shell dpkg-buildflags --get CPPFLAGS)
-export CFLAGS:=$(shell dpkg-buildflags --get CFLAGS)
-export CXXFLAGS:=$(shell dpkg-buildflags --get CXXFLAGS)
-export LDFLAGS:=$(shell dpkg-buildflags --get LDFLAGS)
-
-# Uncomment this to turn on verbose mode.
-#export DH_VERBOSE=1
-
-%:
- dh --with autoreconf $@
-
-override_dh_clean:
- dh_clean
- rm -rf *.lo *.la *.o .libs
- rm -rf *.c libtool stamp-h1 Makefile
-
-.PHONY: override_dh_strip
-override_dh_strip:
- dh_strip --dbg-package=libzerg0-dbg
Copied: trunk/packages/rostlab/libzerg/tags/1.0.7-6/debian/rules (from rev 18012, trunk/packages/rostlab/libzerg/trunk/debian/rules)
===================================================================
--- trunk/packages/rostlab/libzerg/tags/1.0.7-6/debian/rules (rev 0)
+++ trunk/packages/rostlab/libzerg/tags/1.0.7-6/debian/rules 2014-09-14 10:00:51 UTC (rev 18014)
@@ -0,0 +1,31 @@
+#!/usr/bin/make -f
+
+export CPPFLAGS:=$(shell dpkg-buildflags --get CPPFLAGS)
+export CFLAGS:=$(shell dpkg-buildflags --get CFLAGS)
+export CXXFLAGS:=$(shell dpkg-buildflags --get CXXFLAGS)
+export LDFLAGS:=$(shell dpkg-buildflags --get LDFLAGS)
+
+# Uncomment this to turn on verbose mode.
+#export DH_VERBOSE=1
+
+Changes: README
+ sed -ne '/License terms/q; /^Changes/,$$p' < $< > $@
+
+build: Changes
+ dh --with autoreconf $@
+
+clean:
+ rm -f Changes
+ dh --with autoreconf $@
+
+%:
+ dh --with autoreconf $@
+
+override_dh_clean:
+ dh_clean
+ rm -rf *.lo *.la *.o .libs
+ rm -rf *.c libtool stamp-h1 Makefile
+
+.PHONY: override_dh_strip
+override_dh_strip:
+ dh_strip --dbg-package=libzerg0-dbg
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