[med-svn] [hyphy] 02/02: Deactivate dynamic library for the moment

[Andreas Tille]

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tille pushed a commit to branch master
in repository hyphy.

commit c7264236feebf81ffce6e1a4ec8587712cd670fa
Author: Andreas Tille <tille at debian.org>
Date:   Fri Jul 10 09:38:15 2015 +0200

    Deactivate dynamic library for the moment
---
 debian/control | 40 +++++++++++++++++++++-------------------
 debian/rules   |  6 +++---
 2 files changed, 24 insertions(+), 22 deletions(-)

diff --git a/debian/control b/debian/control
index fa2588e..6287eaa 100644
--- a/debian/control
+++ b/debian/control
@@ -90,25 +90,6 @@ Description: Hypothesis testing using Phylogenies (common files)
  .
  This package provides files that are common to all binary versions.
 
-Package: libhyphy
-Architecture: any
-Depends: ${shlibs:Depends},
-         ${misc:Depends}
-Description: Hypothesis testing using Phylogenies (library)
- HyPhy is an open-source software package for the analysis of genetic
- sequences using techniques in phylogenetics, molecular evolution, and
- machine learning. It features a complete graphical user interface (GUI)
- and a rich scripting language for limitless customization of analyses.
- Additionally, HyPhy features support for parallel computing environments
- (via message passing interface) and it can be compiled as a shared
- library and called from other programming environments such as Python or
- R.  Continued development of HyPhy is currently supported in part by an
- NIGMS R01 award 1R01GM093939.
- .
- This package provides files that a dynamic library.
- .
- FIXME: The usage is unclear currently.
-
 Package: python-hyphy
 Architecture: any
 Section: python
@@ -149,3 +130,24 @@ Description: Hypothesis testing using Phylogenies (Python 3 module)
  .
  This package provides files the Python 3 module.
 
+#Package: libhyphy
+#Architecture: any
+#Depends: ${shlibs:Depends},
+#         ${misc:Depends}
+#Description: Hypothesis testing using Phylogenies (library)
+# HyPhy is an open-source software package for the analysis of genetic
+# sequences using techniques in phylogenetics, molecular evolution, and
+# machine learning. It features a complete graphical user interface (GUI)
+# and a rich scripting language for limitless customization of analyses.
+# Additionally, HyPhy features support for parallel computing environments
+# (via message passing interface) and it can be compiled as a shared
+# library and called from other programming environments such as Python or
+# R.  Continued development of HyPhy is currently supported in part by an
+# NIGMS R01 award 1R01GM093939.
+# .
+# This package provides files that a dynamic library.
+# .
+# .
+# The usage is unclear currently and upstream was asked for
+# clarification
+#
diff --git a/debian/rules b/debian/rules
index e383f89..8b58ee4 100755
--- a/debian/rules
+++ b/debian/rules
@@ -22,7 +22,7 @@ override_dh_auto_configure:
 
 override_dh_auto_build:
 	# no idea about the purpose of the dynamic library - executables are not simply linked against it
-	dh_auto_build -- HYPHYGTK MP2 MPI GTEST LIB
+	dh_auto_build -- HYPHYGTK MP2 MPI GTEST # LIB
 	# create Python modules
 	cd src/lib ; \
 	for py in $(PYVERS) $(PY3VERS); do \
@@ -45,8 +45,8 @@ override_dh_auto_install:
 		$$py -B setup.py install --skip-build --root ../../debian/python3-$(PYBUILD_NAME) \
 				      --install-layout deb; \
 	done
-	mkdir -p $(CURDIR)/debian/lib$(pkg)/usr/lib
-	find debian -name "lib*.so" -exec mv \{\} $(CURDIR)/debian/lib$(pkg)/usr/lib \;
+	#mkdir -p $(CURDIR)/debian/lib$(pkg)/usr/lib
+	#find debian -name "lib*.so" -exec mv \{\} $(CURDIR)/debian/lib$(pkg)/usr/lib \;
 
 override_dh_install:
 	# smallcaps for executables

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