[med-svn] [tophat] 01/03: Imported Upstream version 2.0.14+dfsg
Alex Mestiashvili
malex-guest at moszumanska.debian.org
Wed Mar 25 14:49:47 UTC 2015
This is an automated email from the git hooks/post-receive script.
malex-guest pushed a commit to branch master
in repository tophat.
commit 6f808e19a6bfa3288268d02eb5a8a469e025355a
Author: Alexandre Mestiashvili <alex at biotec.tu-dresden.de>
Date: Wed Mar 25 15:03:37 2015 +0100
Imported Upstream version 2.0.14+dfsg
---
Makefile.in | 493 ++-
aclocal.m4 | 812 ++--
ar-lib | 270 ++
config.h.in | 10 +-
configure | 10208 +++++++++++++++++++++++------------------------
configure.ac | 10 +-
src/Makefile.am | 24 +-
src/Makefile.in | 524 ++-
src/bam_merge_impl.cpp | 29 +-
src/common.cpp | 12 +
src/reads.cpp | 26 +-
src/reads.h | 129 +-
src/tophat-fusion-post | 2 +-
src/tophat.py | 15 +-
src/tophat_reports.cpp | 37 +-
15 files changed, 6596 insertions(+), 6005 deletions(-)
diff --git a/Makefile.in b/Makefile.in
index bcd296a..3195b2b 100644
--- a/Makefile.in
+++ b/Makefile.in
@@ -1,8 +1,8 @@
-# Makefile.in generated by automake 1.9.6 from Makefile.am.
+# Makefile.in generated by automake 1.12.6 from Makefile.am.
# @configure_input@
-# Copyright (C) 1994, 1995, 1996, 1997, 1998, 1999, 2000, 2001, 2002,
-# 2003, 2004, 2005 Free Software Foundation, Inc.
+# Copyright (C) 1994-2012 Free Software Foundation, Inc.
+
# This Makefile.in is free software; the Free Software Foundation
# gives unlimited permission to copy and/or distribute it,
# with or without modifications, as long as this notice is preserved.
@@ -13,15 +13,29 @@
# PARTICULAR PURPOSE.
@SET_MAKE@
-srcdir = @srcdir@
-top_srcdir = @top_srcdir@
VPATH = @srcdir@
+am__make_dryrun = \
+ { \
+ am__dry=no; \
+ case $$MAKEFLAGS in \
+ *\\[\ \ ]*) \
+ echo 'am--echo: ; @echo "AM" OK' | $(MAKE) -f - 2>/dev/null \
+ | grep '^AM OK$$' >/dev/null || am__dry=yes;; \
+ *) \
+ for am__flg in $$MAKEFLAGS; do \
+ case $$am__flg in \
+ *=*|--*) ;; \
+ *n*) am__dry=yes; break;; \
+ esac; \
+ done;; \
+ esac; \
+ test $$am__dry = yes; \
+ }
pkgdatadir = $(datadir)/@PACKAGE@
-pkglibdir = $(libdir)/@PACKAGE@
pkgincludedir = $(includedir)/@PACKAGE@
-top_builddir = .
+pkglibdir = $(libdir)/@PACKAGE@
+pkglibexecdir = $(libexecdir)/@PACKAGE@
am__cd = CDPATH="$${ZSH_VERSION+.}$(PATH_SEPARATOR)" && cd
-INSTALL = @INSTALL@
install_sh_DATA = $(install_sh) -c -m 644
install_sh_PROGRAM = $(install_sh) -c
install_sh_SCRIPT = $(install_sh) -c
@@ -35,46 +49,90 @@ PRE_UNINSTALL = :
POST_UNINSTALL = :
build_triplet = @build@
host_triplet = @host@
+subdir = .
DIST_COMMON = README $(am__configure_deps) $(srcdir)/Makefile.am \
$(srcdir)/Makefile.in $(srcdir)/config.h.in \
$(top_srcdir)/configure AUTHORS COPYING ChangeLog INSTALL NEWS \
- THANKS config.guess config.sub depcomp install-sh missing
-subdir = .
+ THANKS ar-lib config.guess config.sub depcomp install-sh \
+ missing
ACLOCAL_M4 = $(top_srcdir)/aclocal.m4
am__aclocal_m4_deps = $(top_srcdir)/ax_boost_base.m4 \
$(top_srcdir)/ax_boost_thread.m4 $(top_srcdir)/configure.ac
am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
$(ACLOCAL_M4)
am__CONFIG_DISTCLEAN_FILES = config.status config.cache config.log \
- configure.lineno configure.status.lineno
+ configure.lineno config.status.lineno
mkinstalldirs = $(install_sh) -d
CONFIG_HEADER = config.h
CONFIG_CLEAN_FILES =
+CONFIG_CLEAN_VPATH_FILES =
SOURCES =
DIST_SOURCES =
RECURSIVE_TARGETS = all-recursive check-recursive dvi-recursive \
html-recursive info-recursive install-data-recursive \
- install-exec-recursive install-info-recursive \
- install-recursive installcheck-recursive installdirs-recursive \
- pdf-recursive ps-recursive uninstall-info-recursive \
- uninstall-recursive
+ install-dvi-recursive install-exec-recursive \
+ install-html-recursive install-info-recursive \
+ install-pdf-recursive install-ps-recursive install-recursive \
+ installcheck-recursive installdirs-recursive pdf-recursive \
+ ps-recursive uninstall-recursive
+am__can_run_installinfo = \
+ case $$AM_UPDATE_INFO_DIR in \
+ n|no|NO) false;; \
+ *) (install-info --version) >/dev/null 2>&1;; \
+ esac
+RECURSIVE_CLEAN_TARGETS = mostlyclean-recursive clean-recursive \
+ distclean-recursive maintainer-clean-recursive
+AM_RECURSIVE_TARGETS = $(RECURSIVE_TARGETS:-recursive=) \
+ $(RECURSIVE_CLEAN_TARGETS:-recursive=) tags TAGS ctags CTAGS \
+ cscope distdir dist dist-all distcheck
ETAGS = etags
CTAGS = ctags
+CSCOPE = cscope
DISTFILES = $(DIST_COMMON) $(DIST_SOURCES) $(TEXINFOS) $(EXTRA_DIST)
distdir = $(PACKAGE)-$(VERSION)
top_distdir = $(distdir)
am__remove_distdir = \
- { test ! -d $(distdir) \
- || { find $(distdir) -type d ! -perm -200 -exec chmod u+w {} ';' \
- && rm -fr $(distdir); }; }
+ if test -d "$(distdir)"; then \
+ find "$(distdir)" -type d ! -perm -200 -exec chmod u+w {} ';' \
+ && rm -rf "$(distdir)" \
+ || { sleep 5 && rm -rf "$(distdir)"; }; \
+ else :; fi
+am__post_remove_distdir = $(am__remove_distdir)
+am__relativize = \
+ dir0=`pwd`; \
+ sed_first='s,^\([^/]*\)/.*$$,\1,'; \
+ sed_rest='s,^[^/]*/*,,'; \
+ sed_last='s,^.*/\([^/]*\)$$,\1,'; \
+ sed_butlast='s,/*[^/]*$$,,'; \
+ while test -n "$$dir1"; do \
+ first=`echo "$$dir1" | sed -e "$$sed_first"`; \
+ if test "$$first" != "."; then \
+ if test "$$first" = ".."; then \
+ dir2=`echo "$$dir0" | sed -e "$$sed_last"`/"$$dir2"; \
+ dir0=`echo "$$dir0" | sed -e "$$sed_butlast"`; \
+ else \
+ first2=`echo "$$dir2" | sed -e "$$sed_first"`; \
+ if test "$$first2" = "$$first"; then \
+ dir2=`echo "$$dir2" | sed -e "$$sed_rest"`; \
+ else \
+ dir2="../$$dir2"; \
+ fi; \
+ dir0="$$dir0"/"$$first"; \
+ fi; \
+ fi; \
+ dir1=`echo "$$dir1" | sed -e "$$sed_rest"`; \
+ done; \
+ reldir="$$dir2"
DIST_ARCHIVES = $(distdir).tar.gz
GZIP_ENV = --best
+DIST_TARGETS = dist-gzip
distuninstallcheck_listfiles = find . -type f -print
+am__distuninstallcheck_listfiles = $(distuninstallcheck_listfiles) \
+ | sed 's|^\./|$(prefix)/|' | grep -v '$(infodir)/dir$$'
distcleancheck_listfiles = find . -type f -print
ACLOCAL = @ACLOCAL@
-AMDEP_FALSE = @AMDEP_FALSE@
-AMDEP_TRUE = @AMDEP_TRUE@
AMTAR = @AMTAR@
+AR = @AR@
AUTOCONF = @AUTOCONF@
AUTOHEADER = @AUTOHEADER@
AUTOMAKE = @AUTOMAKE@
@@ -101,6 +159,8 @@ ECHO_N = @ECHO_N@
ECHO_T = @ECHO_T@
EGREP = @EGREP@
EXEEXT = @EXEEXT@
+GREP = @GREP@
+INSTALL = @INSTALL@
INSTALL_DATA = @INSTALL_DATA@
INSTALL_PROGRAM = @INSTALL_PROGRAM@
INSTALL_SCRIPT = @INSTALL_SCRIPT@
@@ -110,12 +170,14 @@ LIBOBJS = @LIBOBJS@
LIBS = @LIBS@
LTLIBOBJS = @LTLIBOBJS@
MAKEINFO = @MAKEINFO@
+MKDIR_P = @MKDIR_P@
OBJEXT = @OBJEXT@
PACKAGE = @PACKAGE@
PACKAGE_BUGREPORT = @PACKAGE_BUGREPORT@
PACKAGE_NAME = @PACKAGE_NAME@
PACKAGE_STRING = @PACKAGE_STRING@
PACKAGE_TARNAME = @PACKAGE_TARNAME@
+PACKAGE_URL = @PACKAGE_URL@
PACKAGE_VERSION = @PACKAGE_VERSION@
PATH_SEPARATOR = @PATH_SEPARATOR@
PYTHON = @PYTHON@
@@ -128,14 +190,13 @@ SET_MAKE = @SET_MAKE@
SHELL = @SHELL@
STRIP = @STRIP@
VERSION = @VERSION@
+abs_builddir = @abs_builddir@
+abs_srcdir = @abs_srcdir@
+abs_top_builddir = @abs_top_builddir@
+abs_top_srcdir = @abs_top_srcdir@
+ac_ct_AR = @ac_ct_AR@
ac_ct_CC = @ac_ct_CC@
ac_ct_CXX = @ac_ct_CXX@
-ac_ct_RANLIB = @ac_ct_RANLIB@
-ac_ct_STRIP = @ac_ct_STRIP@
-am__fastdepCC_FALSE = @am__fastdepCC_FALSE@
-am__fastdepCC_TRUE = @am__fastdepCC_TRUE@
-am__fastdepCXX_FALSE = @am__fastdepCXX_FALSE@
-am__fastdepCXX_TRUE = @am__fastdepCXX_TRUE@
am__include = @am__include@
am__leading_dot = @am__leading_dot@
am__quote = @am__quote@
@@ -147,32 +208,44 @@ build_alias = @build_alias@
build_cpu = @build_cpu@
build_os = @build_os@
build_vendor = @build_vendor@
+builddir = @builddir@
datadir = @datadir@
+datarootdir = @datarootdir@
+docdir = @docdir@
+dvidir = @dvidir@
exec_prefix = @exec_prefix@
host = @host@
host_alias = @host_alias@
host_cpu = @host_cpu@
host_os = @host_os@
host_vendor = @host_vendor@
+htmldir = @htmldir@
includedir = @includedir@
infodir = @infodir@
install_sh = @install_sh@
libdir = @libdir@
libexecdir = @libexecdir@
+localedir = @localedir@
localstatedir = @localstatedir@
mandir = @mandir@
mkdir_p = @mkdir_p@
oldincludedir = @oldincludedir@
+pdfdir = @pdfdir@
pkgpyexecdir = @pkgpyexecdir@
pkgpythondir = @pkgpythondir@
prefix = @prefix@
program_transform_name = @program_transform_name@
+psdir = @psdir@
pyexecdir = @pyexecdir@
pythondir = @pythondir@
sbindir = @sbindir@
sharedstatedir = @sharedstatedir@
+srcdir = @srcdir@
sysconfdir = @sysconfdir@
target_alias = @target_alias@
+top_build_prefix = @top_build_prefix@
+top_builddir = @top_builddir@
+top_srcdir = @top_srcdir@
ALWAYS_BUILT = src
SUBDIRS = $(ALWAYS_BUILT)
DIST_SUBDIRS = $(ALWAYS_BUILT)
@@ -181,21 +254,21 @@ all: config.h
$(MAKE) $(AM_MAKEFLAGS) all-recursive
.SUFFIXES:
-am--refresh:
+am--refresh: Makefile
@:
$(srcdir)/Makefile.in: $(srcdir)/Makefile.am $(am__configure_deps)
@for dep in $?; do \
case '$(am__configure_deps)' in \
*$$dep*) \
- echo ' cd $(srcdir) && $(AUTOMAKE) --foreign '; \
- cd $(srcdir) && $(AUTOMAKE) --foreign \
+ echo ' cd $(srcdir) && $(AUTOMAKE) --foreign'; \
+ $(am__cd) $(srcdir) && $(AUTOMAKE) --foreign \
&& exit 0; \
exit 1;; \
esac; \
done; \
- echo ' cd $(top_srcdir) && $(AUTOMAKE) --foreign Makefile'; \
- cd $(top_srcdir) && \
- $(AUTOMAKE) --foreign Makefile
+ echo ' cd $(top_srcdir) && $(AUTOMAKE) --foreign Makefile'; \
+ $(am__cd) $(top_srcdir) && \
+ $(AUTOMAKE) --foreign Makefile
.PRECIOUS: Makefile
Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
@case '$?' in \
@@ -211,36 +284,34 @@ $(top_builddir)/config.status: $(top_srcdir)/configure $(CONFIG_STATUS_DEPENDENC
$(SHELL) ./config.status --recheck
$(top_srcdir)/configure: $(am__configure_deps)
- cd $(srcdir) && $(AUTOCONF)
+ $(am__cd) $(srcdir) && $(AUTOCONF)
$(ACLOCAL_M4): $(am__aclocal_m4_deps)
- cd $(srcdir) && $(ACLOCAL) $(ACLOCAL_AMFLAGS)
+ $(am__cd) $(srcdir) && $(ACLOCAL) $(ACLOCAL_AMFLAGS)
+$(am__aclocal_m4_deps):
config.h: stamp-h1
- @if test ! -f $@; then \
- rm -f stamp-h1; \
- $(MAKE) stamp-h1; \
- else :; fi
+ @if test ! -f $@; then rm -f stamp-h1; else :; fi
+ @if test ! -f $@; then $(MAKE) $(AM_MAKEFLAGS) stamp-h1; else :; fi
stamp-h1: $(srcdir)/config.h.in $(top_builddir)/config.status
@rm -f stamp-h1
cd $(top_builddir) && $(SHELL) ./config.status config.h
$(srcdir)/config.h.in: $(am__configure_deps)
- cd $(top_srcdir) && $(AUTOHEADER)
+ ($(am__cd) $(top_srcdir) && $(AUTOHEADER))
rm -f stamp-h1
touch $@
distclean-hdr:
-rm -f config.h stamp-h1
-uninstall-info-am:
# This directory's subdirectories are mostly independent; you can cd
-# into them and run `make' without going through this Makefile.
-# To change the values of `make' variables: instead of editing Makefiles,
-# (1) if the variable is set in `config.status', edit `config.status'
-# (which will cause the Makefiles to be regenerated when you run `make');
-# (2) otherwise, pass the desired values on the `make' command line.
-$(RECURSIVE_TARGETS):
- @failcom='exit 1'; \
+# into them and run 'make' without going through this Makefile.
+# To change the values of 'make' variables: instead of editing Makefiles,
+# (1) if the variable is set in 'config.status', edit 'config.status'
+# (which will cause the Makefiles to be regenerated when you run 'make');
+# (2) otherwise, pass the desired values on the 'make' command line.
+$(RECURSIVE_TARGETS) $(RECURSIVE_CLEAN_TARGETS):
+ @fail= failcom='exit 1'; \
for f in x $$MAKEFLAGS; do \
case $$f in \
*=* | --[!k]*);; \
@@ -249,7 +320,11 @@ $(RECURSIVE_TARGETS):
done; \
dot_seen=no; \
target=`echo $@ | sed s/-recursive//`; \
- list='$(SUBDIRS)'; for subdir in $$list; do \
+ case "$@" in \
+ distclean-* | maintainer-clean-*) list='$(DIST_SUBDIRS)' ;; \
+ *) list='$(SUBDIRS)' ;; \
+ esac; \
+ for subdir in $$list; do \
echo "Making $$target in $$subdir"; \
if test "$$subdir" = "."; then \
dot_seen=yes; \
@@ -257,51 +332,23 @@ $(RECURSIVE_TARGETS):
else \
local_target="$$target"; \
fi; \
- (cd $$subdir && $(MAKE) $(AM_MAKEFLAGS) $$local_target) \
+ ($(am__cd) $$subdir && $(MAKE) $(AM_MAKEFLAGS) $$local_target) \
|| eval $$failcom; \
done; \
if test "$$dot_seen" = "no"; then \
$(MAKE) $(AM_MAKEFLAGS) "$$target-am" || exit 1; \
fi; test -z "$$fail"
-
-mostlyclean-recursive clean-recursive distclean-recursive \
-maintainer-clean-recursive:
- @failcom='exit 1'; \
- for f in x $$MAKEFLAGS; do \
- case $$f in \
- *=* | --[!k]*);; \
- *k*) failcom='fail=yes';; \
- esac; \
- done; \
- dot_seen=no; \
- case "$@" in \
- distclean-* | maintainer-clean-*) list='$(DIST_SUBDIRS)' ;; \
- *) list='$(SUBDIRS)' ;; \
- esac; \
- rev=''; for subdir in $$list; do \
- if test "$$subdir" = "."; then :; else \
- rev="$$subdir $$rev"; \
- fi; \
- done; \
- rev="$$rev ."; \
- target=`echo $@ | sed s/-recursive//`; \
- for subdir in $$rev; do \
- echo "Making $$target in $$subdir"; \
- if test "$$subdir" = "."; then \
- local_target="$$target-am"; \
- else \
- local_target="$$target"; \
- fi; \
- (cd $$subdir && $(MAKE) $(AM_MAKEFLAGS) $$local_target) \
- || eval $$failcom; \
- done && test -z "$$fail"
tags-recursive:
list='$(SUBDIRS)'; for subdir in $$list; do \
- test "$$subdir" = . || (cd $$subdir && $(MAKE) $(AM_MAKEFLAGS) tags); \
+ test "$$subdir" = . || ($(am__cd) $$subdir && $(MAKE) $(AM_MAKEFLAGS) tags); \
done
ctags-recursive:
list='$(SUBDIRS)'; for subdir in $$list; do \
- test "$$subdir" = . || (cd $$subdir && $(MAKE) $(AM_MAKEFLAGS) ctags); \
+ test "$$subdir" = . || ($(am__cd) $$subdir && $(MAKE) $(AM_MAKEFLAGS) ctags); \
+ done
+cscopelist-recursive:
+ list='$(SUBDIRS)'; for subdir in $$list; do \
+ test "$$subdir" = . || ($(am__cd) $$subdir && $(MAKE) $(AM_MAKEFLAGS) cscopelist); \
done
ID: $(HEADERS) $(SOURCES) $(LISP) $(TAGS_FILES)
@@ -309,14 +356,14 @@ ID: $(HEADERS) $(SOURCES) $(LISP) $(TAGS_FILES)
unique=`for i in $$list; do \
if test -f "$$i"; then echo $$i; else echo $(srcdir)/$$i; fi; \
done | \
- $(AWK) ' { files[$$0] = 1; } \
- END { for (i in files) print i; }'`; \
+ $(AWK) '{ files[$$0] = 1; nonempty = 1; } \
+ END { if (nonempty) { for (i in files) print i; }; }'`; \
mkid -fID $$unique
tags: TAGS
TAGS: tags-recursive $(HEADERS) $(SOURCES) config.h.in $(TAGS_DEPENDENCIES) \
$(TAGS_FILES) $(LISP)
- tags=; \
+ set x; \
here=`pwd`; \
if ($(ETAGS) --etags-include --version) >/dev/null 2>&1; then \
include_option=--etags-include; \
@@ -328,116 +375,167 @@ TAGS: tags-recursive $(HEADERS) $(SOURCES) config.h.in $(TAGS_DEPENDENCIES) \
list='$(SUBDIRS)'; for subdir in $$list; do \
if test "$$subdir" = .; then :; else \
test ! -f $$subdir/TAGS || \
- tags="$$tags $$include_option=$$here/$$subdir/TAGS"; \
+ set "$$@" "$$include_option=$$here/$$subdir/TAGS"; \
fi; \
done; \
list='$(SOURCES) $(HEADERS) config.h.in $(LISP) $(TAGS_FILES)'; \
unique=`for i in $$list; do \
if test -f "$$i"; then echo $$i; else echo $(srcdir)/$$i; fi; \
done | \
- $(AWK) ' { files[$$0] = 1; } \
- END { for (i in files) print i; }'`; \
- if test -z "$(ETAGS_ARGS)$$tags$$unique"; then :; else \
+ $(AWK) '{ files[$$0] = 1; nonempty = 1; } \
+ END { if (nonempty) { for (i in files) print i; }; }'`; \
+ shift; \
+ if test -z "$(ETAGS_ARGS)$$*$$unique"; then :; else \
test -n "$$unique" || unique=$$empty_fix; \
- $(ETAGS) $(ETAGSFLAGS) $(AM_ETAGSFLAGS) $(ETAGS_ARGS) \
- $$tags $$unique; \
+ if test $$# -gt 0; then \
+ $(ETAGS) $(ETAGSFLAGS) $(AM_ETAGSFLAGS) $(ETAGS_ARGS) \
+ "$$@" $$unique; \
+ else \
+ $(ETAGS) $(ETAGSFLAGS) $(AM_ETAGSFLAGS) $(ETAGS_ARGS) \
+ $$unique; \
+ fi; \
fi
ctags: CTAGS
CTAGS: ctags-recursive $(HEADERS) $(SOURCES) config.h.in $(TAGS_DEPENDENCIES) \
$(TAGS_FILES) $(LISP)
- tags=; \
- here=`pwd`; \
list='$(SOURCES) $(HEADERS) config.h.in $(LISP) $(TAGS_FILES)'; \
unique=`for i in $$list; do \
if test -f "$$i"; then echo $$i; else echo $(srcdir)/$$i; fi; \
done | \
- $(AWK) ' { files[$$0] = 1; } \
- END { for (i in files) print i; }'`; \
- test -z "$(CTAGS_ARGS)$$tags$$unique" \
+ $(AWK) '{ files[$$0] = 1; nonempty = 1; } \
+ END { if (nonempty) { for (i in files) print i; }; }'`; \
+ test -z "$(CTAGS_ARGS)$$unique" \
|| $(CTAGS) $(CTAGSFLAGS) $(AM_CTAGSFLAGS) $(CTAGS_ARGS) \
- $$tags $$unique
+ $$unique
GTAGS:
here=`$(am__cd) $(top_builddir) && pwd` \
- && cd $(top_srcdir) \
- && gtags -i $(GTAGS_ARGS) $$here
+ && $(am__cd) $(top_srcdir) \
+ && gtags -i $(GTAGS_ARGS) "$$here"
+
+cscope: cscope.files
+ test ! -s cscope.files \
+ || $(CSCOPE) -b -q $(AM_CSCOPEFLAGS) $(CSCOPEFLAGS) -i cscope.files $(CSCOPE_ARGS)
+
+clean-cscope:
+ -rm -f cscope.files
+
+cscope.files: clean-cscope cscopelist-recursive cscopelist
+
+cscopelist: cscopelist-recursive $(HEADERS) $(SOURCES) $(LISP)
+ list='$(SOURCES) $(HEADERS) $(LISP)'; \
+ case "$(srcdir)" in \
+ [\\/]* | ?:[\\/]*) sdir="$(srcdir)" ;; \
+ *) sdir=$(subdir)/$(srcdir) ;; \
+ esac; \
+ for i in $$list; do \
+ if test -f "$$i"; then \
+ echo "$(subdir)/$$i"; \
+ else \
+ echo "$$sdir/$$i"; \
+ fi; \
+ done >> $(top_builddir)/cscope.files
distclean-tags:
-rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
+ -rm -f cscope.out cscope.in.out cscope.po.out cscope.files
distdir: $(DISTFILES)
$(am__remove_distdir)
- mkdir $(distdir)
- @srcdirstrip=`echo "$(srcdir)" | sed 's|.|.|g'`; \
- topsrcdirstrip=`echo "$(top_srcdir)" | sed 's|.|.|g'`; \
- list='$(DISTFILES)'; for file in $$list; do \
- case $$file in \
- $(srcdir)/*) file=`echo "$$file" | sed "s|^$$srcdirstrip/||"`;; \
- $(top_srcdir)/*) file=`echo "$$file" | sed "s|^$$topsrcdirstrip/|$(top_builddir)/|"`;; \
- esac; \
+ test -d "$(distdir)" || mkdir "$(distdir)"
+ @srcdirstrip=`echo "$(srcdir)" | sed 's/[].[^$$\\*]/\\\\&/g'`; \
+ topsrcdirstrip=`echo "$(top_srcdir)" | sed 's/[].[^$$\\*]/\\\\&/g'`; \
+ list='$(DISTFILES)'; \
+ dist_files=`for file in $$list; do echo $$file; done | \
+ sed -e "s|^$$srcdirstrip/||;t" \
+ -e "s|^$$topsrcdirstrip/|$(top_builddir)/|;t"`; \
+ case $$dist_files in \
+ */*) $(MKDIR_P) `echo "$$dist_files" | \
+ sed '/\//!d;s|^|$(distdir)/|;s,/[^/]*$$,,' | \
+ sort -u` ;; \
+ esac; \
+ for file in $$dist_files; do \
if test -f $$file || test -d $$file; then d=.; else d=$(srcdir); fi; \
- dir=`echo "$$file" | sed -e 's,/[^/]*$$,,'`; \
- if test "$$dir" != "$$file" && test "$$dir" != "."; then \
- dir="/$$dir"; \
- $(mkdir_p) "$(distdir)$$dir"; \
- else \
- dir=''; \
- fi; \
if test -d $$d/$$file; then \
+ dir=`echo "/$$file" | sed -e 's,/[^/]*$$,,'`; \
+ if test -d "$(distdir)/$$file"; then \
+ find "$(distdir)/$$file" -type d ! -perm -700 -exec chmod u+rwx {} \;; \
+ fi; \
if test -d $(srcdir)/$$file && test $$d != $(srcdir); then \
- cp -pR $(srcdir)/$$file $(distdir)$$dir || exit 1; \
+ cp -fpR $(srcdir)/$$file "$(distdir)$$dir" || exit 1; \
+ find "$(distdir)/$$file" -type d ! -perm -700 -exec chmod u+rwx {} \;; \
fi; \
- cp -pR $$d/$$file $(distdir)$$dir || exit 1; \
+ cp -fpR $$d/$$file "$(distdir)$$dir" || exit 1; \
else \
- test -f $(distdir)/$$file \
- || cp -p $$d/$$file $(distdir)/$$file \
+ test -f "$(distdir)/$$file" \
+ || cp -p $$d/$$file "$(distdir)/$$file" \
|| exit 1; \
fi; \
done
- list='$(DIST_SUBDIRS)'; for subdir in $$list; do \
+ @list='$(DIST_SUBDIRS)'; for subdir in $$list; do \
if test "$$subdir" = .; then :; else \
- test -d "$(distdir)/$$subdir" \
- || $(mkdir_p) "$(distdir)/$$subdir" \
- || exit 1; \
- distdir=`$(am__cd) $(distdir) && pwd`; \
- top_distdir=`$(am__cd) $(top_distdir) && pwd`; \
- (cd $$subdir && \
+ $(am__make_dryrun) \
+ || test -d "$(distdir)/$$subdir" \
+ || $(MKDIR_P) "$(distdir)/$$subdir" \
+ || exit 1; \
+ dir1=$$subdir; dir2="$(distdir)/$$subdir"; \
+ $(am__relativize); \
+ new_distdir=$$reldir; \
+ dir1=$$subdir; dir2="$(top_distdir)"; \
+ $(am__relativize); \
+ new_top_distdir=$$reldir; \
+ echo " (cd $$subdir && $(MAKE) $(AM_MAKEFLAGS) top_distdir="$$new_top_distdir" distdir="$$new_distdir" \\"; \
+ echo " am__remove_distdir=: am__skip_length_check=: am__skip_mode_fix=: distdir)"; \
+ ($(am__cd) $$subdir && \
$(MAKE) $(AM_MAKEFLAGS) \
- top_distdir="$$top_distdir" \
- distdir="$$distdir/$$subdir" \
+ top_distdir="$$new_top_distdir" \
+ distdir="$$new_distdir" \
+ am__remove_distdir=: \
+ am__skip_length_check=: \
+ am__skip_mode_fix=: \
distdir) \
|| exit 1; \
fi; \
done
- -find $(distdir) -type d ! -perm -755 -exec chmod a+rwx,go+rx {} \; -o \
+ -test -n "$(am__skip_mode_fix)" \
+ || find "$(distdir)" -type d ! -perm -755 \
+ -exec chmod u+rwx,go+rx {} \; -o \
! -type d ! -perm -444 -links 1 -exec chmod a+r {} \; -o \
! -type d ! -perm -400 -exec chmod a+r {} \; -o \
- ! -type d ! -perm -444 -exec $(SHELL) $(install_sh) -c -m a+r {} {} \; \
- || chmod -R a+r $(distdir)
+ ! -type d ! -perm -444 -exec $(install_sh) -c -m a+r {} {} \; \
+ || chmod -R a+r "$(distdir)"
dist-gzip: distdir
tardir=$(distdir) && $(am__tar) | GZIP=$(GZIP_ENV) gzip -c >$(distdir).tar.gz
- $(am__remove_distdir)
+ $(am__post_remove_distdir)
dist-bzip2: distdir
- tardir=$(distdir) && $(am__tar) | bzip2 -9 -c >$(distdir).tar.bz2
- $(am__remove_distdir)
+ tardir=$(distdir) && $(am__tar) | BZIP2=$${BZIP2--9} bzip2 -c >$(distdir).tar.bz2
+ $(am__post_remove_distdir)
+
+dist-lzip: distdir
+ tardir=$(distdir) && $(am__tar) | lzip -c $${LZIP_OPT--9} >$(distdir).tar.lz
+ $(am__post_remove_distdir)
+
+dist-xz: distdir
+ tardir=$(distdir) && $(am__tar) | XZ_OPT=$${XZ_OPT--e} xz -c >$(distdir).tar.xz
+ $(am__post_remove_distdir)
dist-tarZ: distdir
tardir=$(distdir) && $(am__tar) | compress -c >$(distdir).tar.Z
- $(am__remove_distdir)
+ $(am__post_remove_distdir)
dist-shar: distdir
shar $(distdir) | GZIP=$(GZIP_ENV) gzip -c >$(distdir).shar.gz
- $(am__remove_distdir)
+ $(am__post_remove_distdir)
dist-zip: distdir
-rm -f $(distdir).zip
zip -rq $(distdir).zip $(distdir)
- $(am__remove_distdir)
+ $(am__post_remove_distdir)
-dist dist-all: distdir
- tardir=$(distdir) && $(am__tar) | GZIP=$(GZIP_ENV) gzip -c >$(distdir).tar.gz
- $(am__remove_distdir)
+dist dist-all:
+ $(MAKE) $(AM_MAKEFLAGS) $(DIST_TARGETS) am__post_remove_distdir='@:'
+ $(am__post_remove_distdir)
# This target untars the dist file and tries a VPATH configuration. Then
# it guarantees that the distribution is self-contained by making another
@@ -445,24 +543,31 @@ dist dist-all: distdir
distcheck: dist
case '$(DIST_ARCHIVES)' in \
*.tar.gz*) \
- GZIP=$(GZIP_ENV) gunzip -c $(distdir).tar.gz | $(am__untar) ;;\
+ GZIP=$(GZIP_ENV) gzip -dc $(distdir).tar.gz | $(am__untar) ;;\
*.tar.bz2*) \
- bunzip2 -c $(distdir).tar.bz2 | $(am__untar) ;;\
+ bzip2 -dc $(distdir).tar.bz2 | $(am__untar) ;;\
+ *.tar.lz*) \
+ lzip -dc $(distdir).tar.lz | $(am__untar) ;;\
+ *.tar.xz*) \
+ xz -dc $(distdir).tar.xz | $(am__untar) ;;\
*.tar.Z*) \
uncompress -c $(distdir).tar.Z | $(am__untar) ;;\
*.shar.gz*) \
- GZIP=$(GZIP_ENV) gunzip -c $(distdir).shar.gz | unshar ;;\
+ GZIP=$(GZIP_ENV) gzip -dc $(distdir).shar.gz | unshar ;;\
*.zip*) \
unzip $(distdir).zip ;;\
esac
- chmod -R a-w $(distdir); chmod u+w $(distdir)
- mkdir $(distdir)/_build
- mkdir $(distdir)/_inst
+ chmod -R a-w $(distdir)
+ chmod u+w $(distdir)
+ mkdir $(distdir)/_build $(distdir)/_inst
chmod a-w $(distdir)
+ test -d $(distdir)/_build || exit 0; \
dc_install_base=`$(am__cd) $(distdir)/_inst && pwd | sed -e 's,^[^:\\/]:[\\/],/,'` \
&& dc_destdir="$${TMPDIR-/tmp}/am-dc-$$$$/" \
- && cd $(distdir)/_build \
+ && am__cwd=`pwd` \
+ && $(am__cd) $(distdir)/_build \
&& ../configure --srcdir=.. --prefix="$$dc_install_base" \
+ $(AM_DISTCHECK_CONFIGURE_FLAGS) \
$(DISTCHECK_CONFIGURE_FLAGS) \
&& $(MAKE) $(AM_MAKEFLAGS) \
&& $(MAKE) $(AM_MAKEFLAGS) dvi \
@@ -483,14 +588,24 @@ distcheck: dist
&& rm -rf "$$dc_destdir" \
&& $(MAKE) $(AM_MAKEFLAGS) dist \
&& rm -rf $(DIST_ARCHIVES) \
- && $(MAKE) $(AM_MAKEFLAGS) distcleancheck
- $(am__remove_distdir)
+ && $(MAKE) $(AM_MAKEFLAGS) distcleancheck \
+ && cd "$$am__cwd" \
+ || exit 1
+ $(am__post_remove_distdir)
@(echo "$(distdir) archives ready for distribution: "; \
list='$(DIST_ARCHIVES)'; for i in $$list; do echo $$i; done) | \
- sed -e '1{h;s/./=/g;p;x;}' -e '$${p;x;}'
+ sed -e 1h -e 1s/./=/g -e 1p -e 1x -e '$$p' -e '$$x'
distuninstallcheck:
- @cd $(distuninstallcheck_dir) \
- && test `$(distuninstallcheck_listfiles) | wc -l` -le 1 \
+ @test -n '$(distuninstallcheck_dir)' || { \
+ echo 'ERROR: trying to run $@ with an empty' \
+ '$$(distuninstallcheck_dir)' >&2; \
+ exit 1; \
+ }; \
+ $(am__cd) '$(distuninstallcheck_dir)' || { \
+ echo 'ERROR: cannot chdir into $(distuninstallcheck_dir)' >&2; \
+ exit 1; \
+ }; \
+ test `$(am__distuninstallcheck_listfiles) | wc -l` -eq 0 \
|| { echo "ERROR: files left after uninstall:" ; \
if test -n "$(DESTDIR)"; then \
echo " (check DESTDIR support)"; \
@@ -521,16 +636,22 @@ install-am: all-am
installcheck: installcheck-recursive
install-strip:
- $(MAKE) $(AM_MAKEFLAGS) INSTALL_PROGRAM="$(INSTALL_STRIP_PROGRAM)" \
- install_sh_PROGRAM="$(INSTALL_STRIP_PROGRAM)" INSTALL_STRIP_FLAG=-s \
- `test -z '$(STRIP)' || \
- echo "INSTALL_PROGRAM_ENV=STRIPPROG='$(STRIP)'"` install
+ if test -z '$(STRIP)'; then \
+ $(MAKE) $(AM_MAKEFLAGS) INSTALL_PROGRAM="$(INSTALL_STRIP_PROGRAM)" \
+ install_sh_PROGRAM="$(INSTALL_STRIP_PROGRAM)" INSTALL_STRIP_FLAG=-s \
+ install; \
+ else \
+ $(MAKE) $(AM_MAKEFLAGS) INSTALL_PROGRAM="$(INSTALL_STRIP_PROGRAM)" \
+ install_sh_PROGRAM="$(INSTALL_STRIP_PROGRAM)" INSTALL_STRIP_FLAG=-s \
+ "INSTALL_PROGRAM_ENV=STRIPPROG='$(STRIP)'" install; \
+ fi
mostlyclean-generic:
clean-generic:
distclean-generic:
-test -z "$(CONFIG_CLEAN_FILES)" || rm -f $(CONFIG_CLEAN_FILES)
+ -test . = "$(srcdir)" || test -z "$(CONFIG_CLEAN_VPATH_FILES)" || rm -f $(CONFIG_CLEAN_VPATH_FILES)
maintainer-clean-generic:
@echo "This command is intended for maintainers to use"
@@ -550,18 +671,38 @@ dvi-am:
html: html-recursive
+html-am:
+
info: info-recursive
info-am:
install-data-am:
+install-dvi: install-dvi-recursive
+
+install-dvi-am:
+
install-exec-am:
+install-html: install-html-recursive
+
+install-html-am:
+
install-info: install-info-recursive
+install-info-am:
+
install-man:
+install-pdf: install-pdf-recursive
+
+install-pdf-am:
+
+install-ps: install-ps-recursive
+
+install-ps-am:
+
installcheck-am:
maintainer-clean: maintainer-clean-recursive
@@ -582,27 +723,31 @@ ps: ps-recursive
ps-am:
-uninstall-am: uninstall-info-am
-
-uninstall-info: uninstall-info-recursive
-
-.PHONY: $(RECURSIVE_TARGETS) CTAGS GTAGS all all-am am--refresh check \
- check-am clean clean-generic clean-recursive ctags \
- ctags-recursive dist dist-all dist-bzip2 dist-gzip dist-shar \
- dist-tarZ dist-zip distcheck distclean distclean-generic \
- distclean-hdr distclean-recursive distclean-tags \
- distcleancheck distdir distuninstallcheck dvi dvi-am html \
- html-am info info-am install install-am install-data \
- install-data-am install-exec install-exec-am install-info \
- install-info-am install-man install-strip installcheck \
- installcheck-am installdirs installdirs-am maintainer-clean \
- maintainer-clean-generic maintainer-clean-recursive \
- mostlyclean mostlyclean-generic mostlyclean-recursive pdf \
- pdf-am ps ps-am tags tags-recursive uninstall uninstall-am \
- uninstall-info-am
+uninstall-am:
+
+.MAKE: $(RECURSIVE_CLEAN_TARGETS) $(RECURSIVE_TARGETS) all \
+ cscopelist-recursive ctags-recursive install-am install-strip \
+ tags-recursive
+
+.PHONY: $(RECURSIVE_CLEAN_TARGETS) $(RECURSIVE_TARGETS) CTAGS GTAGS \
+ all all-am am--refresh check check-am clean clean-cscope \
+ clean-generic cscope cscopelist cscopelist-recursive ctags \
+ ctags-recursive dist dist-all dist-bzip2 dist-gzip dist-lzip \
+ dist-shar dist-tarZ dist-xz dist-zip distcheck distclean \
+ distclean-generic distclean-hdr distclean-tags distcleancheck \
+ distdir distuninstallcheck dvi dvi-am html html-am info \
+ info-am install install-am install-data install-data-am \
+ install-dvi install-dvi-am install-exec install-exec-am \
+ install-html install-html-am install-info install-info-am \
+ install-man install-pdf install-pdf-am install-ps \
+ install-ps-am install-strip installcheck installcheck-am \
+ installdirs installdirs-am maintainer-clean \
+ maintainer-clean-generic mostlyclean mostlyclean-generic pdf \
+ pdf-am ps ps-am tags tags-recursive uninstall uninstall-am
.PHONY: FORCE
+
# Tell versions [3.59,3.63) of GNU make to not export all variables.
# Otherwise a system limit (for SysV at least) may be exceeded.
.NOEXPORT:
diff --git a/aclocal.m4 b/aclocal.m4
index 7f99a5a..7cfd856 100644
--- a/aclocal.m4
+++ b/aclocal.m4
@@ -1,7 +1,7 @@
-# generated automatically by aclocal 1.9.6 -*- Autoconf -*-
+# generated automatically by aclocal 1.12.6 -*- Autoconf -*-
+
+# Copyright (C) 1996-2012 Free Software Foundation, Inc.
-# Copyright (C) 1996, 1997, 1998, 1999, 2000, 2001, 2002, 2003, 2004,
-# 2005 Free Software Foundation, Inc.
# This file is free software; the Free Software Foundation
# gives unlimited permission to copy and/or distribute it,
# with or without modifications, as long as this notice is preserved.
@@ -11,7 +11,15 @@
# even the implied warranty of MERCHANTABILITY or FITNESS FOR A
# PARTICULAR PURPOSE.
-# Copyright (C) 2002, 2003, 2005 Free Software Foundation, Inc.
+m4_ifndef([AC_AUTOCONF_VERSION],
+ [m4_copy([m4_PACKAGE_VERSION], [AC_AUTOCONF_VERSION])])dnl
+m4_if(m4_defn([AC_AUTOCONF_VERSION]), [2.69],,
+[m4_warning([this file was generated for autoconf 2.69.
+You have another version of autoconf. It may work, but is not guaranteed to.
+If you have problems, you may need to regenerate the build system entirely.
+To do so, use the procedure documented by the package, typically 'autoreconf'.])])
+
+# Copyright (C) 2002-2012 Free Software Foundation, Inc.
#
# This file is free software; the Free Software Foundation
# gives unlimited permission to copy and/or distribute it,
@@ -21,26 +29,102 @@
# ----------------------------
# Automake X.Y traces this macro to ensure aclocal.m4 has been
# generated from the m4 files accompanying Automake X.Y.
-AC_DEFUN([AM_AUTOMAKE_VERSION], [am__api_version="1.9"])
+# (This private macro should not be called outside this file.)
+AC_DEFUN([AM_AUTOMAKE_VERSION],
+[am__api_version='1.12'
+dnl Some users find AM_AUTOMAKE_VERSION and mistake it for a way to
+dnl require some minimum version. Point them to the right macro.
+m4_if([$1], [1.12.6], [],
+ [AC_FATAL([Do not call $0, use AM_INIT_AUTOMAKE([$1]).])])dnl
+])
+
+# _AM_AUTOCONF_VERSION(VERSION)
+# -----------------------------
+# aclocal traces this macro to find the Autoconf version.
+# This is a private macro too. Using m4_define simplifies
+# the logic in aclocal, which can simply ignore this definition.
+m4_define([_AM_AUTOCONF_VERSION], [])
# AM_SET_CURRENT_AUTOMAKE_VERSION
# -------------------------------
-# Call AM_AUTOMAKE_VERSION so it can be traced.
-# This function is AC_REQUIREd by AC_INIT_AUTOMAKE.
+# Call AM_AUTOMAKE_VERSION and AM_AUTOMAKE_VERSION so they can be traced.
+# This function is AC_REQUIREd by AM_INIT_AUTOMAKE.
AC_DEFUN([AM_SET_CURRENT_AUTOMAKE_VERSION],
- [AM_AUTOMAKE_VERSION([1.9.6])])
+[AM_AUTOMAKE_VERSION([1.12.6])dnl
+m4_ifndef([AC_AUTOCONF_VERSION],
+ [m4_copy([m4_PACKAGE_VERSION], [AC_AUTOCONF_VERSION])])dnl
+_AM_AUTOCONF_VERSION(m4_defn([AC_AUTOCONF_VERSION]))])
+
+# Copyright (C) 2011-2012 Free Software Foundation, Inc.
+#
+# This file is free software; the Free Software Foundation
+# gives unlimited permission to copy and/or distribute it,
+# with or without modifications, as long as this notice is preserved.
+
+# AM_PROG_AR([ACT-IF-FAIL])
+# -------------------------
+# Try to determine the archiver interface, and trigger the ar-lib wrapper
+# if it is needed. If the detection of archiver interface fails, run
+# ACT-IF-FAIL (default is to abort configure with a proper error message).
+AC_DEFUN([AM_PROG_AR],
+[AC_BEFORE([$0], [LT_INIT])dnl
+AC_BEFORE([$0], [AC_PROG_LIBTOOL])dnl
+AC_REQUIRE([AM_AUX_DIR_EXPAND])dnl
+AC_REQUIRE_AUX_FILE([ar-lib])dnl
+AC_CHECK_TOOLS([AR], [ar lib "link -lib"], [false])
+: ${AR=ar}
+
+AC_CACHE_CHECK([the archiver ($AR) interface], [am_cv_ar_interface],
+ [am_cv_ar_interface=ar
+ AC_COMPILE_IFELSE([AC_LANG_SOURCE([[int some_variable = 0;]])],
+ [am_ar_try='$AR cru libconftest.a conftest.$ac_objext >&AS_MESSAGE_LOG_FD'
+ AC_TRY_EVAL([am_ar_try])
+ if test "$ac_status" -eq 0; then
+ am_cv_ar_interface=ar
+ else
+ am_ar_try='$AR -NOLOGO -OUT:conftest.lib conftest.$ac_objext >&AS_MESSAGE_LOG_FD'
+ AC_TRY_EVAL([am_ar_try])
+ if test "$ac_status" -eq 0; then
+ am_cv_ar_interface=lib
+ else
+ am_cv_ar_interface=unknown
+ fi
+ fi
+ rm -f conftest.lib libconftest.a
+ ])
+ ])
+
+case $am_cv_ar_interface in
+ar)
+ ;;
+lib)
+ # Microsoft lib, so override with the ar-lib wrapper script.
+ # FIXME: It is wrong to rewrite AR.
+ # But if we don't then we get into trouble of one sort or another.
+ # A longer-term fix would be to have automake use am__AR in this case,
+ # and then we could set am__AR="$am_aux_dir/ar-lib \$(AR)" or something
+ # similar.
+ AR="$am_aux_dir/ar-lib $AR"
+ ;;
+unknown)
+ m4_default([$1],
+ [AC_MSG_ERROR([could not determine $AR interface])])
+ ;;
+esac
+AC_SUBST([AR])dnl
+])
# AM_AUX_DIR_EXPAND -*- Autoconf -*-
-# Copyright (C) 2001, 2003, 2005 Free Software Foundation, Inc.
+# Copyright (C) 2001-2012 Free Software Foundation, Inc.
#
# This file is free software; the Free Software Foundation
# gives unlimited permission to copy and/or distribute it,
# with or without modifications, as long as this notice is preserved.
# For projects using AC_CONFIG_AUX_DIR([foo]), Autoconf sets
-# $ac_aux_dir to `$srcdir/foo'. In other projects, it is set to
-# `$srcdir', `$srcdir/..', or `$srcdir/../..'.
+# $ac_aux_dir to '$srcdir/foo'. In other projects, it is set to
+# '$srcdir', '$srcdir/..', or '$srcdir/../..'.
#
# Of course, Automake must honor this variable whenever it calls a
# tool from the auxiliary directory. The problem is that $srcdir (and
@@ -59,7 +143,7 @@ AC_DEFUN([AM_SET_CURRENT_AUTOMAKE_VERSION],
#
# The reason of the latter failure is that $top_srcdir and $ac_aux_dir
# are both prefixed by $srcdir. In an in-source build this is usually
-# harmless because $srcdir is `.', but things will broke when you
+# harmless because $srcdir is '.', but things will broke when you
# start a VPATH build or use an absolute $srcdir.
#
# So we could use something similar to $top_srcdir/$ac_aux_dir/missing,
@@ -85,24 +169,24 @@ am_aux_dir=`cd $ac_aux_dir && pwd`
# AM_CONDITIONAL -*- Autoconf -*-
-# Copyright (C) 1997, 2000, 2001, 2003, 2004, 2005
-# Free Software Foundation, Inc.
+# Copyright (C) 1997-2012 Free Software Foundation, Inc.
#
# This file is free software; the Free Software Foundation
# gives unlimited permission to copy and/or distribute it,
# with or without modifications, as long as this notice is preserved.
-# serial 7
-
# AM_CONDITIONAL(NAME, SHELL-CONDITION)
# -------------------------------------
# Define a conditional.
AC_DEFUN([AM_CONDITIONAL],
-[AC_PREREQ(2.52)dnl
- ifelse([$1], [TRUE], [AC_FATAL([$0: invalid condition: $1])],
- [$1], [FALSE], [AC_FATAL([$0: invalid condition: $1])])dnl
-AC_SUBST([$1_TRUE])
-AC_SUBST([$1_FALSE])
+[AC_PREREQ([2.52])dnl
+ m4_if([$1], [TRUE], [AC_FATAL([$0: invalid condition: $1])],
+ [$1], [FALSE], [AC_FATAL([$0: invalid condition: $1])])dnl
+AC_SUBST([$1_TRUE])dnl
+AC_SUBST([$1_FALSE])dnl
+_AM_SUBST_NOTMAKE([$1_TRUE])dnl
+_AM_SUBST_NOTMAKE([$1_FALSE])dnl
+m4_define([_AM_COND_VALUE_$1], [$2])dnl
if $2; then
$1_TRUE=
$1_FALSE='#'
@@ -116,17 +200,14 @@ AC_CONFIG_COMMANDS_PRE(
Usually this means the macro was only invoked conditionally.]])
fi])])
-
-# Copyright (C) 1999, 2000, 2001, 2002, 2003, 2004, 2005
-# Free Software Foundation, Inc.
+# Copyright (C) 1999-2012 Free Software Foundation, Inc.
#
# This file is free software; the Free Software Foundation
# gives unlimited permission to copy and/or distribute it,
# with or without modifications, as long as this notice is preserved.
-# serial 8
-# There are a few dirty hacks below to avoid letting `AC_PROG_CC' be
+# There are a few dirty hacks below to avoid letting 'AC_PROG_CC' be
# written in clear, in which case automake, when reading aclocal.m4,
# will think it sees a *use*, and therefore will trigger all it's
# C support machinery. Also note that it means that autoscan, seeing
@@ -136,7 +217,7 @@ fi])])
# _AM_DEPENDENCIES(NAME)
# ----------------------
# See how the compiler implements dependency checking.
-# NAME is "CC", "CXX", "GCJ", or "OBJC".
+# NAME is "CC", "CXX", "OBJC", "OBJCXX", "UPC", or "GJC".
# We try a few techniques and use that to set a single cache variable.
#
# We don't AC_REQUIRE the corresponding AC_PROG_CC since the latter was
@@ -149,11 +230,13 @@ AC_REQUIRE([AM_OUTPUT_DEPENDENCY_COMMANDS])dnl
AC_REQUIRE([AM_MAKE_INCLUDE])dnl
AC_REQUIRE([AM_DEP_TRACK])dnl
-ifelse([$1], CC, [depcc="$CC" am_compiler_list=],
- [$1], CXX, [depcc="$CXX" am_compiler_list=],
- [$1], OBJC, [depcc="$OBJC" am_compiler_list='gcc3 gcc'],
- [$1], GCJ, [depcc="$GCJ" am_compiler_list='gcc3 gcc'],
- [depcc="$$1" am_compiler_list=])
+m4_if([$1], [CC], [depcc="$CC" am_compiler_list=],
+ [$1], [CXX], [depcc="$CXX" am_compiler_list=],
+ [$1], [OBJC], [depcc="$OBJC" am_compiler_list='gcc3 gcc'],
+ [$1], [OBJCXX], [depcc="$OBJCXX" am_compiler_list='gcc3 gcc'],
+ [$1], [UPC], [depcc="$UPC" am_compiler_list=],
+ [$1], [GCJ], [depcc="$GCJ" am_compiler_list='gcc3 gcc'],
+ [depcc="$$1" am_compiler_list=])
AC_CACHE_CHECK([dependency style of $depcc],
[am_cv_$1_dependencies_compiler_type],
@@ -161,8 +244,9 @@ AC_CACHE_CHECK([dependency style of $depcc],
# We make a subdir and do the tests there. Otherwise we can end up
# making bogus files that we don't know about and never remove. For
# instance it was reported that on HP-UX the gcc test will end up
- # making a dummy file named `D' -- because `-MD' means `put the output
- # in D'.
+ # making a dummy file named 'D' -- because '-MD' means "put the output
+ # in D".
+ rm -rf conftest.dir
mkdir conftest.dir
# Copy depcomp to subdir because otherwise we won't find it if we're
# using a relative directory.
@@ -180,6 +264,16 @@ AC_CACHE_CHECK([dependency style of $depcc],
if test "$am_compiler_list" = ""; then
am_compiler_list=`sed -n ['s/^#*\([a-zA-Z0-9]*\))$/\1/p'] < ./depcomp`
fi
+ am__universal=false
+ m4_case([$1], [CC],
+ [case " $depcc " in #(
+ *\ -arch\ *\ -arch\ *) am__universal=true ;;
+ esac],
+ [CXX],
+ [case " $depcc " in #(
+ *\ -arch\ *\ -arch\ *) am__universal=true ;;
+ esac])
+
for depmode in $am_compiler_list; do
# Setup a source with many dependencies, because some compilers
# like to wrap large dependency lists on column 80 (with \), and
@@ -191,34 +285,49 @@ AC_CACHE_CHECK([dependency style of $depcc],
: > sub/conftest.c
for i in 1 2 3 4 5 6; do
echo '#include "conftst'$i'.h"' >> sub/conftest.c
- # Using `: > sub/conftst$i.h' creates only sub/conftst1.h with
- # Solaris 8's {/usr,}/bin/sh.
- touch sub/conftst$i.h
+ # Using ": > sub/conftst$i.h" creates only sub/conftst1.h with
+ # Solaris 10 /bin/sh.
+ echo '/* dummy */' > sub/conftst$i.h
done
echo "${am__include} ${am__quote}sub/conftest.Po${am__quote}" > confmf
+ # We check with '-c' and '-o' for the sake of the "dashmstdout"
+ # mode. It turns out that the SunPro C++ compiler does not properly
+ # handle '-M -o', and we need to detect this. Also, some Intel
+ # versions had trouble with output in subdirs.
+ am__obj=sub/conftest.${OBJEXT-o}
+ am__minus_obj="-o $am__obj"
case $depmode in
+ gcc)
+ # This depmode causes a compiler race in universal mode.
+ test "$am__universal" = false || continue
+ ;;
nosideeffect)
- # after this tag, mechanisms are not by side-effect, so they'll
- # only be used when explicitly requested
+ # After this tag, mechanisms are not by side-effect, so they'll
+ # only be used when explicitly requested.
if test "x$enable_dependency_tracking" = xyes; then
continue
else
break
fi
;;
+ msvc7 | msvc7msys | msvisualcpp | msvcmsys)
+ # This compiler won't grok '-c -o', but also, the minuso test has
+ # not run yet. These depmodes are late enough in the game, and
+ # so weak that their functioning should not be impacted.
+ am__obj=conftest.${OBJEXT-o}
+ am__minus_obj=
+ ;;
none) break ;;
esac
- # We check with `-c' and `-o' for the sake of the "dashmstdout"
- # mode. It turns out that the SunPro C++ compiler does not properly
- # handle `-M -o', and we need to detect this.
if depmode=$depmode \
- source=sub/conftest.c object=sub/conftest.${OBJEXT-o} \
+ source=sub/conftest.c object=$am__obj \
depfile=sub/conftest.Po tmpdepfile=sub/conftest.TPo \
- $SHELL ./depcomp $depcc -c -o sub/conftest.${OBJEXT-o} sub/conftest.c \
+ $SHELL ./depcomp $depcc -c $am__minus_obj sub/conftest.c \
>/dev/null 2>conftest.err &&
+ grep sub/conftst1.h sub/conftest.Po > /dev/null 2>&1 &&
grep sub/conftst6.h sub/conftest.Po > /dev/null 2>&1 &&
- grep sub/conftest.${OBJEXT-o} sub/conftest.Po > /dev/null 2>&1 &&
+ grep $am__obj sub/conftest.Po > /dev/null 2>&1 &&
${MAKE-make} -s -f confmf > /dev/null 2>&1; then
# icc doesn't choke on unknown options, it will just issue warnings
# or remarks (even with -Werror). So we grep stderr for any message
@@ -251,7 +360,7 @@ AM_CONDITIONAL([am__fastdep$1], [
# AM_SET_DEPDIR
# -------------
# Choose a directory name for dependency files.
-# This macro is AC_REQUIREd in _AM_DEPENDENCIES
+# This macro is AC_REQUIREd in _AM_DEPENDENCIES.
AC_DEFUN([AM_SET_DEPDIR],
[AC_REQUIRE([AM_SET_LEADING_DOT])dnl
AC_SUBST([DEPDIR], ["${am__leading_dot}deps"])dnl
@@ -261,69 +370,85 @@ AC_SUBST([DEPDIR], ["${am__leading_dot}deps"])dnl
# AM_DEP_TRACK
# ------------
AC_DEFUN([AM_DEP_TRACK],
-[AC_ARG_ENABLE(dependency-tracking,
-[ --disable-dependency-tracking speeds up one-time build
- --enable-dependency-tracking do not reject slow dependency extractors])
+[AC_ARG_ENABLE([dependency-tracking], [dnl
+AS_HELP_STRING(
+ [--enable-dependency-tracking],
+ [do not reject slow dependency extractors])
+AS_HELP_STRING(
+ [--disable-dependency-tracking],
+ [speeds up one-time build])])
if test "x$enable_dependency_tracking" != xno; then
am_depcomp="$ac_aux_dir/depcomp"
AMDEPBACKSLASH='\'
+ am__nodep='_no'
fi
AM_CONDITIONAL([AMDEP], [test "x$enable_dependency_tracking" != xno])
-AC_SUBST([AMDEPBACKSLASH])
+AC_SUBST([AMDEPBACKSLASH])dnl
+_AM_SUBST_NOTMAKE([AMDEPBACKSLASH])dnl
+AC_SUBST([am__nodep])dnl
+_AM_SUBST_NOTMAKE([am__nodep])dnl
])
# Generate code to set up dependency tracking. -*- Autoconf -*-
-# Copyright (C) 1999, 2000, 2001, 2002, 2003, 2004, 2005
-# Free Software Foundation, Inc.
+# Copyright (C) 1999-2012 Free Software Foundation, Inc.
#
# This file is free software; the Free Software Foundation
# gives unlimited permission to copy and/or distribute it,
# with or without modifications, as long as this notice is preserved.
-#serial 3
# _AM_OUTPUT_DEPENDENCY_COMMANDS
# ------------------------------
AC_DEFUN([_AM_OUTPUT_DEPENDENCY_COMMANDS],
-[for mf in $CONFIG_FILES; do
- # Strip MF so we end up with the name of the file.
- mf=`echo "$mf" | sed -e 's/:.*$//'`
- # Check whether this is an Automake generated Makefile or not.
- # We used to match only the files named `Makefile.in', but
- # some people rename them; so instead we look at the file content.
- # Grep'ing the first line is not enough: some people post-process
- # each Makefile.in and add a new line on top of each file to say so.
- # So let's grep whole file.
- if grep '^#.*generated by automake' $mf > /dev/null 2>&1; then
- dirpart=`AS_DIRNAME("$mf")`
- else
- continue
- fi
- # Extract the definition of DEPDIR, am__include, and am__quote
- # from the Makefile without running `make'.
- DEPDIR=`sed -n 's/^DEPDIR = //p' < "$mf"`
- test -z "$DEPDIR" && continue
- am__include=`sed -n 's/^am__include = //p' < "$mf"`
- test -z "am__include" && continue
- am__quote=`sed -n 's/^am__quote = //p' < "$mf"`
- # When using ansi2knr, U may be empty or an underscore; expand it
- U=`sed -n 's/^U = //p' < "$mf"`
- # Find all dependency output files, they are included files with
- # $(DEPDIR) in their names. We invoke sed twice because it is the
- # simplest approach to changing $(DEPDIR) to its actual value in the
- # expansion.
- for file in `sed -n "
- s/^$am__include $am__quote\(.*(DEPDIR).*\)$am__quote"'$/\1/p' <"$mf" | \
- sed -e 's/\$(DEPDIR)/'"$DEPDIR"'/g' -e 's/\$U/'"$U"'/g'`; do
- # Make sure the directory exists.
- test -f "$dirpart/$file" && continue
- fdir=`AS_DIRNAME(["$file"])`
- AS_MKDIR_P([$dirpart/$fdir])
- # echo "creating $dirpart/$file"
- echo '# dummy' > "$dirpart/$file"
+[{
+ # Autoconf 2.62 quotes --file arguments for eval, but not when files
+ # are listed without --file. Let's play safe and only enable the eval
+ # if we detect the quoting.
+ case $CONFIG_FILES in
+ *\'*) eval set x "$CONFIG_FILES" ;;
+ *) set x $CONFIG_FILES ;;
+ esac
+ shift
+ for mf
+ do
+ # Strip MF so we end up with the name of the file.
+ mf=`echo "$mf" | sed -e 's/:.*$//'`
+ # Check whether this is an Automake generated Makefile or not.
+ # We used to match only the files named 'Makefile.in', but
+ # some people rename them; so instead we look at the file content.
+ # Grep'ing the first line is not enough: some people post-process
+ # each Makefile.in and add a new line on top of each file to say so.
+ # Grep'ing the whole file is not good either: AIX grep has a line
+ # limit of 2048, but all sed's we know have understand at least 4000.
+ if sed -n 's,^#.*generated by automake.*,X,p' "$mf" | grep X >/dev/null 2>&1; then
+ dirpart=`AS_DIRNAME("$mf")`
+ else
+ continue
+ fi
+ # Extract the definition of DEPDIR, am__include, and am__quote
+ # from the Makefile without running 'make'.
+ DEPDIR=`sed -n 's/^DEPDIR = //p' < "$mf"`
+ test -z "$DEPDIR" && continue
+ am__include=`sed -n 's/^am__include = //p' < "$mf"`
+ test -z "am__include" && continue
+ am__quote=`sed -n 's/^am__quote = //p' < "$mf"`
+ # Find all dependency output files, they are included files with
+ # $(DEPDIR) in their names. We invoke sed twice because it is the
+ # simplest approach to changing $(DEPDIR) to its actual value in the
+ # expansion.
+ for file in `sed -n "
+ s/^$am__include $am__quote\(.*(DEPDIR).*\)$am__quote"'$/\1/p' <"$mf" | \
+ sed -e 's/\$(DEPDIR)/'"$DEPDIR"'/g'`; do
+ # Make sure the directory exists.
+ test -f "$dirpart/$file" && continue
+ fdir=`AS_DIRNAME(["$file"])`
+ AS_MKDIR_P([$dirpart/$fdir])
+ # echo "creating $dirpart/$file"
+ echo '# dummy' > "$dirpart/$file"
+ done
done
-done
+}
])# _AM_OUTPUT_DEPENDENCY_COMMANDS
@@ -332,7 +457,7 @@ done
# This macro should only be invoked once -- use via AC_REQUIRE.
#
# This code is only required when automatic dependency tracking
-# is enabled. FIXME. This creates each `.P' file that we will
+# is enabled. FIXME. This creates each '.P' file that we will
# need in order to bootstrap the dependency handling code.
AC_DEFUN([AM_OUTPUT_DEPENDENCY_COMMANDS],
[AC_CONFIG_COMMANDS([depfiles],
@@ -342,15 +467,12 @@ AC_DEFUN([AM_OUTPUT_DEPENDENCY_COMMANDS],
# Do all the work for Automake. -*- Autoconf -*-
-# Copyright (C) 1996, 1997, 1998, 1999, 2000, 2001, 2002, 2003, 2004, 2005
-# Free Software Foundation, Inc.
+# Copyright (C) 1996-2012 Free Software Foundation, Inc.
#
# This file is free software; the Free Software Foundation
# gives unlimited permission to copy and/or distribute it,
# with or without modifications, as long as this notice is preserved.
-# serial 12
-
# This macro actually does too much. Some checks are only needed if
# your package does certain things. But this isn't really a big deal.
@@ -366,16 +488,20 @@ AC_DEFUN([AM_OUTPUT_DEPENDENCY_COMMANDS],
# arguments mandatory, and then we can depend on a new Autoconf
# release and drop the old call support.
AC_DEFUN([AM_INIT_AUTOMAKE],
-[AC_PREREQ([2.58])dnl
+[AC_PREREQ([2.62])dnl
dnl Autoconf wants to disallow AM_ names. We explicitly allow
dnl the ones we care about.
m4_pattern_allow([^AM_[A-Z]+FLAGS$])dnl
AC_REQUIRE([AM_SET_CURRENT_AUTOMAKE_VERSION])dnl
AC_REQUIRE([AC_PROG_INSTALL])dnl
-# test to see if srcdir already configured
-if test "`cd $srcdir && pwd`" != "`pwd`" &&
- test -f $srcdir/config.status; then
- AC_MSG_ERROR([source directory already configured; run "make distclean" there first])
+if test "`cd $srcdir && pwd`" != "`pwd`"; then
+ # Use -I$(srcdir) only when $(srcdir) != ., so that make's output
+ # is not polluted with repeated "-I."
+ AC_SUBST([am__isrc], [' -I$(srcdir)'])_AM_SUBST_NOTMAKE([am__isrc])dnl
+ # test to see if srcdir already configured
+ if test -f $srcdir/config.status; then
+ AC_MSG_ERROR([source directory already configured; run "make distclean" there first])
+ fi
fi
# test whether we have cygpath
@@ -391,48 +517,85 @@ AC_SUBST([CYGPATH_W])
# Define the identity of the package.
dnl Distinguish between old-style and new-style calls.
m4_ifval([$2],
-[m4_ifval([$3], [_AM_SET_OPTION([no-define])])dnl
+[AC_DIAGNOSE([obsolete],
+[$0: two- and three-arguments forms are deprecated. For more info, see:
+http://www.gnu.org/software/automake/manual/automake.html#Modernize-AM_INIT_AUTOMAKE-invocation])
+m4_ifval([$3], [_AM_SET_OPTION([no-define])])dnl
AC_SUBST([PACKAGE], [$1])dnl
AC_SUBST([VERSION], [$2])],
[_AM_SET_OPTIONS([$1])dnl
+dnl Diagnose old-style AC_INIT with new-style AM_AUTOMAKE_INIT.
+m4_if(
+ m4_ifdef([AC_PACKAGE_NAME], [ok]):m4_ifdef([AC_PACKAGE_VERSION], [ok]),
+ [ok:ok],,
+ [m4_fatal([AC_INIT should be called with package and version arguments])])dnl
AC_SUBST([PACKAGE], ['AC_PACKAGE_TARNAME'])dnl
AC_SUBST([VERSION], ['AC_PACKAGE_VERSION'])])dnl
_AM_IF_OPTION([no-define],,
-[AC_DEFINE_UNQUOTED(PACKAGE, "$PACKAGE", [Name of package])
- AC_DEFINE_UNQUOTED(VERSION, "$VERSION", [Version number of package])])dnl
+[AC_DEFINE_UNQUOTED([PACKAGE], ["$PACKAGE"], [Name of package])
+ AC_DEFINE_UNQUOTED([VERSION], ["$VERSION"], [Version number of package])])dnl
# Some tools Automake needs.
AC_REQUIRE([AM_SANITY_CHECK])dnl
AC_REQUIRE([AC_ARG_PROGRAM])dnl
-AM_MISSING_PROG(ACLOCAL, aclocal-${am__api_version})
-AM_MISSING_PROG(AUTOCONF, autoconf)
-AM_MISSING_PROG(AUTOMAKE, automake-${am__api_version})
-AM_MISSING_PROG(AUTOHEADER, autoheader)
-AM_MISSING_PROG(MAKEINFO, makeinfo)
-AM_PROG_INSTALL_SH
-AM_PROG_INSTALL_STRIP
-AC_REQUIRE([AM_PROG_MKDIR_P])dnl
+AM_MISSING_PROG([ACLOCAL], [aclocal-${am__api_version}])
+AM_MISSING_PROG([AUTOCONF], [autoconf])
+AM_MISSING_PROG([AUTOMAKE], [automake-${am__api_version}])
+AM_MISSING_PROG([AUTOHEADER], [autoheader])
+AM_MISSING_PROG([MAKEINFO], [makeinfo])
+AC_REQUIRE([AM_PROG_INSTALL_SH])dnl
+AC_REQUIRE([AM_PROG_INSTALL_STRIP])dnl
+AC_REQUIRE([AC_PROG_MKDIR_P])dnl
+# For better backward compatibility. To be removed once Automake 1.9.x
+# dies out for good. For more background, see:
+# <http://lists.gnu.org/archive/html/automake/2012-07/msg00001.html>
+# <http://lists.gnu.org/archive/html/automake/2012-07/msg00014.html>
+AC_SUBST([mkdir_p], ['$(MKDIR_P)'])
# We need awk for the "check" target. The system "awk" is bad on
# some platforms.
AC_REQUIRE([AC_PROG_AWK])dnl
AC_REQUIRE([AC_PROG_MAKE_SET])dnl
AC_REQUIRE([AM_SET_LEADING_DOT])dnl
_AM_IF_OPTION([tar-ustar], [_AM_PROG_TAR([ustar])],
- [_AM_IF_OPTION([tar-pax], [_AM_PROG_TAR([pax])],
- [_AM_PROG_TAR([v7])])])
+ [_AM_IF_OPTION([tar-pax], [_AM_PROG_TAR([pax])],
+ [_AM_PROG_TAR([v7])])])
_AM_IF_OPTION([no-dependencies],,
[AC_PROVIDE_IFELSE([AC_PROG_CC],
- [_AM_DEPENDENCIES(CC)],
- [define([AC_PROG_CC],
- defn([AC_PROG_CC])[_AM_DEPENDENCIES(CC)])])dnl
+ [_AM_DEPENDENCIES([CC])],
+ [m4_define([AC_PROG_CC],
+ m4_defn([AC_PROG_CC])[_AM_DEPENDENCIES([CC])])])dnl
AC_PROVIDE_IFELSE([AC_PROG_CXX],
- [_AM_DEPENDENCIES(CXX)],
- [define([AC_PROG_CXX],
- defn([AC_PROG_CXX])[_AM_DEPENDENCIES(CXX)])])dnl
+ [_AM_DEPENDENCIES([CXX])],
+ [m4_define([AC_PROG_CXX],
+ m4_defn([AC_PROG_CXX])[_AM_DEPENDENCIES([CXX])])])dnl
+AC_PROVIDE_IFELSE([AC_PROG_OBJC],
+ [_AM_DEPENDENCIES([OBJC])],
+ [m4_define([AC_PROG_OBJC],
+ m4_defn([AC_PROG_OBJC])[_AM_DEPENDENCIES([OBJC])])])dnl
+dnl Support for Objective C++ was only introduced in Autoconf 2.65,
+dnl but we still cater to Autoconf 2.62.
+m4_ifdef([AC_PROG_OBJCXX],
+[AC_PROVIDE_IFELSE([AC_PROG_OBJCXX],
+ [_AM_DEPENDENCIES([OBJCXX])],
+ [m4_define([AC_PROG_OBJCXX],
+ m4_defn([AC_PROG_OBJCXX])[_AM_DEPENDENCIES([OBJCXX])])])])dnl
])
+_AM_IF_OPTION([silent-rules], [AC_REQUIRE([AM_SILENT_RULES])])dnl
+dnl The 'parallel-tests' driver may need to know about EXEEXT, so add the
+dnl 'am__EXEEXT' conditional if _AM_COMPILER_EXEEXT was seen. This macro
+dnl is hooked onto _AC_COMPILER_EXEEXT early, see below.
+AC_CONFIG_COMMANDS_PRE(dnl
+[m4_provide_if([_AM_COMPILER_EXEEXT],
+ [AM_CONDITIONAL([am__EXEEXT], [test -n "$EXEEXT"])])])dnl
])
+dnl Hook into '_AC_COMPILER_EXEEXT' early to learn its expansion. Do not
+dnl add the conditional right here, as _AC_COMPILER_EXEEXT may be further
+dnl mangled by Autoconf and run in a shell conditional statement.
+m4_define([_AC_COMPILER_EXEEXT],
+m4_defn([_AC_COMPILER_EXEEXT])[m4_provide([_AM_COMPILER_EXEEXT])])
+
# When config.status generates a header, we must update the stamp-h file.
# This file resides in the same directory as the config header
@@ -443,18 +606,19 @@ AC_PROVIDE_IFELSE([AC_PROG_CXX],
# our stamp files there.
AC_DEFUN([_AC_AM_CONFIG_HEADER_HOOK],
[# Compute $1's index in $config_headers.
+_am_arg=$1
_am_stamp_count=1
for _am_header in $config_headers :; do
case $_am_header in
- $1 | $1:* )
+ $_am_arg | $_am_arg:* )
break ;;
* )
_am_stamp_count=`expr $_am_stamp_count + 1` ;;
esac
done
-echo "timestamp for $1" >`AS_DIRNAME([$1])`/stamp-h[]$_am_stamp_count])
+echo "timestamp for $_am_arg" >`AS_DIRNAME(["$_am_arg"])`/stamp-h[]$_am_stamp_count])
-# Copyright (C) 2001, 2003, 2005 Free Software Foundation, Inc.
+# Copyright (C) 2001-2012 Free Software Foundation, Inc.
#
# This file is free software; the Free Software Foundation
# gives unlimited permission to copy and/or distribute it,
@@ -465,17 +629,22 @@ echo "timestamp for $1" >`AS_DIRNAME([$1])`/stamp-h[]$_am_stamp_count])
# Define $install_sh.
AC_DEFUN([AM_PROG_INSTALL_SH],
[AC_REQUIRE([AM_AUX_DIR_EXPAND])dnl
-install_sh=${install_sh-"$am_aux_dir/install-sh"}
-AC_SUBST(install_sh)])
+if test x"${install_sh}" != xset; then
+ case $am_aux_dir in
+ *\ * | *\ *)
+ install_sh="\${SHELL} '$am_aux_dir/install-sh'" ;;
+ *)
+ install_sh="\${SHELL} $am_aux_dir/install-sh"
+ esac
+fi
+AC_SUBST([install_sh])])
-# Copyright (C) 2003, 2005 Free Software Foundation, Inc.
+# Copyright (C) 2003-2012 Free Software Foundation, Inc.
#
# This file is free software; the Free Software Foundation
# gives unlimited permission to copy and/or distribute it,
# with or without modifications, as long as this notice is preserved.
-# serial 2
-
# Check whether the underlying file-system supports filenames
# with a leading dot. For instance MS-DOS doesn't.
AC_DEFUN([AM_SET_LEADING_DOT],
@@ -491,14 +660,12 @@ AC_SUBST([am__leading_dot])])
# Check to see how 'make' treats includes. -*- Autoconf -*-
-# Copyright (C) 2001, 2002, 2003, 2005 Free Software Foundation, Inc.
+# Copyright (C) 2001-2012 Free Software Foundation, Inc.
#
# This file is free software; the Free Software Foundation
# gives unlimited permission to copy and/or distribute it,
# with or without modifications, as long as this notice is preserved.
-# serial 3
-
# AM_MAKE_INCLUDE()
# -----------------
# Check to see how make treats includes.
@@ -506,7 +673,7 @@ AC_DEFUN([AM_MAKE_INCLUDE],
[am_make=${MAKE-make}
cat > confinc << 'END'
am__doit:
- @echo done
+ @echo this is the am__doit target
.PHONY: am__doit
END
# If we don't find an include directive, just comment out the code.
@@ -516,24 +683,24 @@ am__quote=
_am_result=none
# First try GNU make style include.
echo "include confinc" > confmf
-# We grep out `Entering directory' and `Leaving directory'
-# messages which can occur if `w' ends up in MAKEFLAGS.
-# In particular we don't look at `^make:' because GNU make might
-# be invoked under some other name (usually "gmake"), in which
-# case it prints its new name instead of `make'.
-if test "`$am_make -s -f confmf 2> /dev/null | grep -v 'ing directory'`" = "done"; then
- am__include=include
- am__quote=
- _am_result=GNU
-fi
+# Ignore all kinds of additional output from 'make'.
+case `$am_make -s -f confmf 2> /dev/null` in #(
+*the\ am__doit\ target*)
+ am__include=include
+ am__quote=
+ _am_result=GNU
+ ;;
+esac
# Now try BSD make style include.
if test "$am__include" = "#"; then
echo '.include "confinc"' > confmf
- if test "`$am_make -s -f confmf 2> /dev/null`" = "done"; then
- am__include=.include
- am__quote="\""
- _am_result=BSD
- fi
+ case `$am_make -s -f confmf 2> /dev/null` in #(
+ *the\ am__doit\ target*)
+ am__include=.include
+ am__quote="\""
+ _am_result=BSD
+ ;;
+ esac
fi
AC_SUBST([am__include])
AC_SUBST([am__quote])
@@ -543,15 +710,12 @@ rm -f confinc confmf
# Fake the existence of programs that GNU maintainers use. -*- Autoconf -*-
-# Copyright (C) 1997, 1999, 2000, 2001, 2003, 2005
-# Free Software Foundation, Inc.
+# Copyright (C) 1997-2012 Free Software Foundation, Inc.
#
# This file is free software; the Free Software Foundation
# gives unlimited permission to copy and/or distribute it,
# with or without modifications, as long as this notice is preserved.
-# serial 4
-
# AM_MISSING_PROG(NAME, PROGRAM)
# ------------------------------
AC_DEFUN([AM_MISSING_PROG],
@@ -559,112 +723,54 @@ AC_DEFUN([AM_MISSING_PROG],
$1=${$1-"${am_missing_run}$2"}
AC_SUBST($1)])
-
# AM_MISSING_HAS_RUN
# ------------------
# Define MISSING if not defined so far and test if it supports --run.
# If it does, set am_missing_run to use it, otherwise, to nothing.
AC_DEFUN([AM_MISSING_HAS_RUN],
[AC_REQUIRE([AM_AUX_DIR_EXPAND])dnl
-test x"${MISSING+set}" = xset || MISSING="\${SHELL} $am_aux_dir/missing"
+AC_REQUIRE_AUX_FILE([missing])dnl
+if test x"${MISSING+set}" != xset; then
+ case $am_aux_dir in
+ *\ * | *\ *)
+ MISSING="\${SHELL} \"$am_aux_dir/missing\"" ;;
+ *)
+ MISSING="\${SHELL} $am_aux_dir/missing" ;;
+ esac
+fi
# Use eval to expand $SHELL
if eval "$MISSING --run true"; then
am_missing_run="$MISSING --run "
else
am_missing_run=
- AC_MSG_WARN([`missing' script is too old or missing])
+ AC_MSG_WARN(['missing' script is too old or missing])
fi
])
-# Copyright (C) 2003, 2004, 2005 Free Software Foundation, Inc.
-#
-# This file is free software; the Free Software Foundation
-# gives unlimited permission to copy and/or distribute it,
-# with or without modifications, as long as this notice is preserved.
-
-# AM_PROG_MKDIR_P
-# ---------------
-# Check whether `mkdir -p' is supported, fallback to mkinstalldirs otherwise.
-#
-# Automake 1.8 used `mkdir -m 0755 -p --' to ensure that directories
-# created by `make install' are always world readable, even if the
-# installer happens to have an overly restrictive umask (e.g. 077).
-# This was a mistake. There are at least two reasons why we must not
-# use `-m 0755':
-# - it causes special bits like SGID to be ignored,
-# - it may be too restrictive (some setups expect 775 directories).
-#
-# Do not use -m 0755 and let people choose whatever they expect by
-# setting umask.
-#
-# We cannot accept any implementation of `mkdir' that recognizes `-p'.
-# Some implementations (such as Solaris 8's) are not thread-safe: if a
-# parallel make tries to run `mkdir -p a/b' and `mkdir -p a/c'
-# concurrently, both version can detect that a/ is missing, but only
-# one can create it and the other will error out. Consequently we
-# restrict ourselves to GNU make (using the --version option ensures
-# this.)
-AC_DEFUN([AM_PROG_MKDIR_P],
-[if mkdir -p --version . >/dev/null 2>&1 && test ! -d ./--version; then
- # We used to keeping the `.' as first argument, in order to
- # allow $(mkdir_p) to be used without argument. As in
- # $(mkdir_p) $(somedir)
- # where $(somedir) is conditionally defined. However this is wrong
- # for two reasons:
- # 1. if the package is installed by a user who cannot write `.'
- # make install will fail,
- # 2. the above comment should most certainly read
- # $(mkdir_p) $(DESTDIR)$(somedir)
- # so it does not work when $(somedir) is undefined and
- # $(DESTDIR) is not.
- # To support the latter case, we have to write
- # test -z "$(somedir)" || $(mkdir_p) $(DESTDIR)$(somedir),
- # so the `.' trick is pointless.
- mkdir_p='mkdir -p --'
-else
- # On NextStep and OpenStep, the `mkdir' command does not
- # recognize any option. It will interpret all options as
- # directories to create, and then abort because `.' already
- # exists.
- for d in ./-p ./--version;
- do
- test -d $d && rmdir $d
- done
- # $(mkinstalldirs) is defined by Automake if mkinstalldirs exists.
- if test -f "$ac_aux_dir/mkinstalldirs"; then
- mkdir_p='$(mkinstalldirs)'
- else
- mkdir_p='$(install_sh) -d'
- fi
-fi
-AC_SUBST([mkdir_p])])
-
# Helper functions for option handling. -*- Autoconf -*-
-# Copyright (C) 2001, 2002, 2003, 2005 Free Software Foundation, Inc.
+# Copyright (C) 2001-2012 Free Software Foundation, Inc.
#
# This file is free software; the Free Software Foundation
# gives unlimited permission to copy and/or distribute it,
# with or without modifications, as long as this notice is preserved.
-# serial 3
-
# _AM_MANGLE_OPTION(NAME)
# -----------------------
AC_DEFUN([_AM_MANGLE_OPTION],
[[_AM_OPTION_]m4_bpatsubst($1, [[^a-zA-Z0-9_]], [_])])
# _AM_SET_OPTION(NAME)
-# ------------------------------
+# --------------------
# Set option NAME. Presently that only means defining a flag for this option.
AC_DEFUN([_AM_SET_OPTION],
-[m4_define(_AM_MANGLE_OPTION([$1]), 1)])
+[m4_define(_AM_MANGLE_OPTION([$1]), [1])])
# _AM_SET_OPTIONS(OPTIONS)
-# ----------------------------------
+# ------------------------
# OPTIONS is a space-separated list of Automake options.
AC_DEFUN([_AM_SET_OPTIONS],
-[AC_FOREACH([_AM_Option], [$1], [_AM_SET_OPTION(_AM_Option)])])
+[m4_foreach_w([_AM_Option], [$1], [_AM_SET_OPTION(_AM_Option)])])
# _AM_IF_OPTION(OPTION, IF-SET, [IF-NOT-SET])
# -------------------------------------------
@@ -672,13 +778,13 @@ AC_DEFUN([_AM_SET_OPTIONS],
AC_DEFUN([_AM_IF_OPTION],
[m4_ifset(_AM_MANGLE_OPTION([$1]), [$2], [$3])])
-# Copyright (C) 1999, 2000, 2001, 2002, 2003, 2004, 2005
-# Free Software Foundation, Inc.
+# Copyright (C) 1999-2012 Free Software Foundation, Inc.
#
# This file is free software; the Free Software Foundation
# gives unlimited permission to copy and/or distribute it,
# with or without modifications, as long as this notice is preserved.
+
# AM_PATH_PYTHON([MINIMUM-VERSION], [ACTION-IF-FOUND], [ACTION-IF-NOT-FOUND])
# ---------------------------------------------------------------------------
# Adds support for distributing Python modules and packages. To
@@ -703,13 +809,13 @@ AC_DEFUN([_AM_IF_OPTION],
# numbers and dots only.
AC_DEFUN([AM_PATH_PYTHON],
[
- dnl Find a Python interpreter. Python versions prior to 1.5 are not
- dnl supported because the default installation locations changed from
- dnl $prefix/lib/site-python in 1.4 to $prefix/lib/python1.5/site-packages
- dnl in 1.5.
+ dnl Find a Python interpreter. Python versions prior to 2.0 are not
+ dnl supported. (2.0 was released on October 16, 2000).
m4_define_default([_AM_PYTHON_INTERPRETER_LIST],
- [python python2 python2.5 python2.4 python2.3 python2.2 dnl
-python2.1 python2.0 python1.6 python1.5])
+[python python2 python3 python3.3 python3.2 python3.1 python3.0 python2.7 dnl
+ python2.6 python2.5 python2.4 python2.3 python2.2 python2.1 python2.0])
+
+ AC_ARG_VAR([PYTHON], [the Python interpreter])
m4_if([$1],[],[
dnl No version check is needed.
@@ -722,10 +828,11 @@ python2.1 python2.0 python1.6 python1.5])
dnl A version check is needed.
if test -n "$PYTHON"; then
# If the user set $PYTHON, use it and don't search something else.
- AC_MSG_CHECKING([whether $PYTHON version >= $1])
+ AC_MSG_CHECKING([whether $PYTHON version is >= $1])
AM_PYTHON_CHECK_VERSION([$PYTHON], [$1],
- [AC_MSG_RESULT(yes)],
- [AC_MSG_ERROR(too old)])
+ [AC_MSG_RESULT([yes])],
+ [AC_MSG_RESULT([no])
+ AC_MSG_ERROR([Python interpreter is too old])])
am_display_PYTHON=$PYTHON
else
# Otherwise, try each interpreter until we find one that satisfies
@@ -756,7 +863,7 @@ python2.1 python2.0 python1.6 python1.5])
dnl library.
AC_CACHE_CHECK([for $am_display_PYTHON version], [am_cv_python_version],
- [am_cv_python_version=`$PYTHON -c "import sys; print sys.version[[:3]]"`])
+ [am_cv_python_version=`$PYTHON -c "import sys; sys.stdout.write(sys.version[[:3]])"`])
AC_SUBST([PYTHON_VERSION], [$am_cv_python_version])
dnl Use the values of $prefix and $exec_prefix for the corresponding
@@ -771,9 +878,28 @@ python2.1 python2.0 python1.6 python1.5])
dnl to know which OS platform Python thinks this is.
AC_CACHE_CHECK([for $am_display_PYTHON platform], [am_cv_python_platform],
- [am_cv_python_platform=`$PYTHON -c "import sys; print sys.platform"`])
+ [am_cv_python_platform=`$PYTHON -c "import sys; sys.stdout.write(sys.platform)"`])
AC_SUBST([PYTHON_PLATFORM], [$am_cv_python_platform])
+ # Just factor out some code duplication.
+ am_python_setup_sysconfig="\
+import sys
+# Prefer sysconfig over distutils.sysconfig, for better compatibility
+# with python 3.x. See automake bug#10227.
+try:
+ import sysconfig
+except ImportError:
+ can_use_sysconfig = 0
+else:
+ can_use_sysconfig = 1
+# Can't use sysconfig in CPython 2.7, since it's broken in virtualenvs:
+# <https://github.com/pypa/virtualenv/issues/118>
+try:
+ from platform import python_implementation
+ if python_implementation() == 'CPython' and sys.version[[:3]] == '2.7':
+ can_use_sysconfig = 0
+except ImportError:
+ pass"
dnl Set up 4 directories:
@@ -781,13 +907,38 @@ python2.1 python2.0 python1.6 python1.5])
dnl site-packages directory, not the python standard library
dnl directory like in previous automake betas. This behavior
dnl is more consistent with lispdir.m4 for example.
- dnl Query distutils for this directory. distutils does not exist in
- dnl Python 1.5, so we fall back to the hardcoded directory if it
- dnl doesn't work.
+ dnl Query distutils for this directory.
AC_CACHE_CHECK([for $am_display_PYTHON script directory],
[am_cv_python_pythondir],
- [am_cv_python_pythondir=`$PYTHON -c "from distutils import sysconfig; print sysconfig.get_python_lib(0,0,prefix='$PYTHON_PREFIX')" 2>/dev/null ||
- echo "$PYTHON_PREFIX/lib/python$PYTHON_VERSION/site-packages"`])
+ [if test "x$prefix" = xNONE
+ then
+ am_py_prefix=$ac_default_prefix
+ else
+ am_py_prefix=$prefix
+ fi
+ am_cv_python_pythondir=`$PYTHON -c "
+$am_python_setup_sysconfig
+if can_use_sysconfig:
+ sitedir = sysconfig.get_path('purelib', vars={'base':'$am_py_prefix'})
+else:
+ from distutils import sysconfig
+ sitedir = sysconfig.get_python_lib(0, 0, prefix='$am_py_prefix')
+sys.stdout.write(sitedir)"`
+ case $am_cv_python_pythondir in
+ $am_py_prefix*)
+ am__strip_prefix=`echo "$am_py_prefix" | sed 's|.|.|g'`
+ am_cv_python_pythondir=`echo "$am_cv_python_pythondir" | sed "s,^$am__strip_prefix,$PYTHON_PREFIX,"`
+ ;;
+ *)
+ case $am_py_prefix in
+ /usr|/System*) ;;
+ *)
+ am_cv_python_pythondir=$PYTHON_PREFIX/lib/python$PYTHON_VERSION/site-packages
+ ;;
+ esac
+ ;;
+ esac
+ ])
AC_SUBST([pythondir], [$am_cv_python_pythondir])
dnl pkgpythondir -- $PACKAGE directory under pythondir. Was
@@ -798,13 +949,38 @@ python2.1 python2.0 python1.6 python1.5])
dnl pyexecdir -- directory for installing python extension modules
dnl (shared libraries)
- dnl Query distutils for this directory. distutils does not exist in
- dnl Python 1.5, so we fall back to the hardcoded directory if it
- dnl doesn't work.
+ dnl Query distutils for this directory.
AC_CACHE_CHECK([for $am_display_PYTHON extension module directory],
[am_cv_python_pyexecdir],
- [am_cv_python_pyexecdir=`$PYTHON -c "from distutils import sysconfig; print sysconfig.get_python_lib(1,0,prefix='$PYTHON_EXEC_PREFIX')" 2>/dev/null ||
- echo "${PYTHON_EXEC_PREFIX}/lib/python${PYTHON_VERSION}/site-packages"`])
+ [if test "x$exec_prefix" = xNONE
+ then
+ am_py_exec_prefix=$am_py_prefix
+ else
+ am_py_exec_prefix=$exec_prefix
+ fi
+ am_cv_python_pyexecdir=`$PYTHON -c "
+$am_python_setup_sysconfig
+if can_use_sysconfig:
+ sitedir = sysconfig.get_path('platlib', vars={'platbase':'$am_py_prefix'})
+else:
+ from distutils import sysconfig
+ sitedir = sysconfig.get_python_lib(1, 0, prefix='$am_py_prefix')
+sys.stdout.write(sitedir)"`
+ case $am_cv_python_pyexecdir in
+ $am_py_exec_prefix*)
+ am__strip_prefix=`echo "$am_py_exec_prefix" | sed 's|.|.|g'`
+ am_cv_python_pyexecdir=`echo "$am_cv_python_pyexecdir" | sed "s,^$am__strip_prefix,$PYTHON_EXEC_PREFIX,"`
+ ;;
+ *)
+ case $am_py_exec_prefix in
+ /usr|/System*) ;;
+ *)
+ am_cv_python_pyexecdir=$PYTHON_EXEC_PREFIX/lib/python$PYTHON_VERSION/site-packages
+ ;;
+ esac
+ ;;
+ esac
+ ])
AC_SUBST([pyexecdir], [$am_cv_python_pyexecdir])
dnl pkgpyexecdir -- $(pyexecdir)/$(PACKAGE)
@@ -824,19 +1000,20 @@ python2.1 python2.0 python1.6 python1.5])
# Run ACTION-IF-FALSE otherwise.
# This test uses sys.hexversion instead of the string equivalent (first
# word of sys.version), in order to cope with versions such as 2.2c1.
-# hexversion has been introduced in Python 1.5.2; it's probably not
-# worth to support older versions (1.5.1 was released on October 31, 1998).
+# This supports Python 2.0 or higher. (2.0 was released on October 16, 2000).
AC_DEFUN([AM_PYTHON_CHECK_VERSION],
- [prog="import sys, string
+ [prog="import sys
# split strings by '.' and convert to numeric. Append some zeros
# because we need at least 4 digits for the hex conversion.
-minver = map(int, string.split('$2', '.')) + [[0, 0, 0]]
+# map returns an iterator in Python 3.0 and a list in 2.x
+minver = list(map(int, '$2'.split('.'))) + [[0, 0, 0]]
minverhex = 0
-for i in xrange(0, 4): minverhex = (minverhex << 8) + minver[[i]]
+# xrange is not present in Python 3.0 and range returns an iterator
+for i in list(range(0, 4)): minverhex = (minverhex << 8) + minver[[i]]
sys.exit(sys.hexversion < minverhex)"
AS_IF([AM_RUN_LOG([$1 -c "$prog"])], [$3], [$4])])
-# Copyright (C) 2001, 2003, 2005 Free Software Foundation, Inc.
+# Copyright (C) 2001-2012 Free Software Foundation, Inc.
#
# This file is free software; the Free Software Foundation
# gives unlimited permission to copy and/or distribute it,
@@ -855,45 +1032,60 @@ AC_DEFUN([AM_RUN_LOG],
# Check to make sure that the build environment is sane. -*- Autoconf -*-
-# Copyright (C) 1996, 1997, 2000, 2001, 2003, 2005
-# Free Software Foundation, Inc.
+# Copyright (C) 1996-2012 Free Software Foundation, Inc.
#
# This file is free software; the Free Software Foundation
# gives unlimited permission to copy and/or distribute it,
# with or without modifications, as long as this notice is preserved.
-# serial 4
-
# AM_SANITY_CHECK
# ---------------
AC_DEFUN([AM_SANITY_CHECK],
[AC_MSG_CHECKING([whether build environment is sane])
-# Just in case
-sleep 1
-echo timestamp > conftest.file
-# Do `set' in a subshell so we don't clobber the current shell's
+# Reject unsafe characters in $srcdir or the absolute working directory
+# name. Accept space and tab only in the latter.
+am_lf='
+'
+case `pwd` in
+ *[[\\\"\#\$\&\'\`$am_lf]]*)
+ AC_MSG_ERROR([unsafe absolute working directory name]);;
+esac
+case $srcdir in
+ *[[\\\"\#\$\&\'\`$am_lf\ \ ]]*)
+ AC_MSG_ERROR([unsafe srcdir value: '$srcdir']);;
+esac
+
+# Do 'set' in a subshell so we don't clobber the current shell's
# arguments. Must try -L first in case configure is actually a
# symlink; some systems play weird games with the mod time of symlinks
# (eg FreeBSD returns the mod time of the symlink's containing
# directory).
if (
- set X `ls -Lt $srcdir/configure conftest.file 2> /dev/null`
- if test "$[*]" = "X"; then
- # -L didn't work.
- set X `ls -t $srcdir/configure conftest.file`
- fi
- rm -f conftest.file
- if test "$[*]" != "X $srcdir/configure conftest.file" \
- && test "$[*]" != "X conftest.file $srcdir/configure"; then
-
- # If neither matched, then we have a broken ls. This can happen
- # if, for instance, CONFIG_SHELL is bash and it inherits a
- # broken ls alias from the environment. This has actually
- # happened. Such a system could not be considered "sane".
- AC_MSG_ERROR([ls -t appears to fail. Make sure there is not a broken
-alias in your environment])
- fi
-
+ am_has_slept=no
+ for am_try in 1 2; do
+ echo "timestamp, slept: $am_has_slept" > conftest.file
+ set X `ls -Lt "$srcdir/configure" conftest.file 2> /dev/null`
+ if test "$[*]" = "X"; then
+ # -L didn't work.
+ set X `ls -t "$srcdir/configure" conftest.file`
+ fi
+ if test "$[*]" != "X $srcdir/configure conftest.file" \
+ && test "$[*]" != "X conftest.file $srcdir/configure"; then
+
+ # If neither matched, then we have a broken ls. This can happen
+ # if, for instance, CONFIG_SHELL is bash and it inherits a
+ # broken ls alias from the environment. This has actually
+ # happened. Such a system could not be considered "sane".
+ AC_MSG_ERROR([ls -t appears to fail. Make sure there is not a broken
+ alias in your environment])
+ fi
+ if test "$[2]" = conftest.file || test $am_try -eq 2; then
+ break
+ fi
+ # Just in case.
+ sleep 1
+ am_has_slept=yes
+ done
test "$[2]" = conftest.file
)
then
@@ -903,9 +1095,25 @@ else
AC_MSG_ERROR([newly created file is older than distributed files!
Check your system clock])
fi
-AC_MSG_RESULT(yes)])
+AC_MSG_RESULT([yes])
+# If we didn't sleep, we still need to ensure time stamps of config.status and
+# generated files are strictly newer.
+am_sleep_pid=
+if grep 'slept: no' conftest.file >/dev/null 2>&1; then
+ ( sleep 1 ) &
+ am_sleep_pid=$!
+fi
+AC_CONFIG_COMMANDS_PRE(
+ [AC_MSG_CHECKING([that generated files are newer than configure])
+ if test -n "$am_sleep_pid"; then
+ # Hide warnings about reused PIDs.
+ wait $am_sleep_pid 2>/dev/null
+ fi
+ AC_MSG_RESULT([done])])
+rm -f conftest.file
+])
-# Copyright (C) 2001, 2003, 2005 Free Software Foundation, Inc.
+# Copyright (C) 2001-2012 Free Software Foundation, Inc.
#
# This file is free software; the Free Software Foundation
# gives unlimited permission to copy and/or distribute it,
@@ -913,40 +1121,55 @@ AC_MSG_RESULT(yes)])
# AM_PROG_INSTALL_STRIP
# ---------------------
-# One issue with vendor `install' (even GNU) is that you can't
+# One issue with vendor 'install' (even GNU) is that you can't
# specify the program used to strip binaries. This is especially
# annoying in cross-compiling environments, where the build's strip
# is unlikely to handle the host's binaries.
# Fortunately install-sh will honor a STRIPPROG variable, so we
-# always use install-sh in `make install-strip', and initialize
+# always use install-sh in "make install-strip", and initialize
# STRIPPROG with the value of the STRIP variable (set by the user).
AC_DEFUN([AM_PROG_INSTALL_STRIP],
[AC_REQUIRE([AM_PROG_INSTALL_SH])dnl
-# Installed binaries are usually stripped using `strip' when the user
-# run `make install-strip'. However `strip' might not be the right
+# Installed binaries are usually stripped using 'strip' when the user
+# run "make install-strip". However 'strip' might not be the right
# tool to use in cross-compilation environments, therefore Automake
-# will honor the `STRIP' environment variable to overrule this program.
-dnl Don't test for $cross_compiling = yes, because it might be `maybe'.
+# will honor the 'STRIP' environment variable to overrule this program.
+dnl Don't test for $cross_compiling = yes, because it might be 'maybe'.
if test "$cross_compiling" != no; then
AC_CHECK_TOOL([STRIP], [strip], :)
fi
-INSTALL_STRIP_PROGRAM="\${SHELL} \$(install_sh) -c -s"
+INSTALL_STRIP_PROGRAM="\$(install_sh) -c -s"
AC_SUBST([INSTALL_STRIP_PROGRAM])])
+# Copyright (C) 2006-2012 Free Software Foundation, Inc.
+#
+# This file is free software; the Free Software Foundation
+# gives unlimited permission to copy and/or distribute it,
+# with or without modifications, as long as this notice is preserved.
+
+# _AM_SUBST_NOTMAKE(VARIABLE)
+# ---------------------------
+# Prevent Automake from outputting VARIABLE = @VARIABLE@ in Makefile.in.
+# This macro is traced by Automake.
+AC_DEFUN([_AM_SUBST_NOTMAKE])
+
+# AM_SUBST_NOTMAKE(VARIABLE)
+# --------------------------
+# Public sister of _AM_SUBST_NOTMAKE.
+AC_DEFUN([AM_SUBST_NOTMAKE], [_AM_SUBST_NOTMAKE($@)])
+
# Check how to create a tarball. -*- Autoconf -*-
-# Copyright (C) 2004, 2005 Free Software Foundation, Inc.
+# Copyright (C) 2004-2012 Free Software Foundation, Inc.
#
# This file is free software; the Free Software Foundation
# gives unlimited permission to copy and/or distribute it,
# with or without modifications, as long as this notice is preserved.
-# serial 2
-
# _AM_PROG_TAR(FORMAT)
# --------------------
# Check how to create a tarball in format FORMAT.
-# FORMAT should be one of `v7', `ustar', or `pax'.
+# FORMAT should be one of 'v7', 'ustar', or 'pax'.
#
# Substitute a variable $(am__tar) that is a command
# writing to stdout a FORMAT-tarball containing the directory
@@ -957,10 +1180,11 @@ AC_SUBST([INSTALL_STRIP_PROGRAM])])
# a tarball read from stdin.
# $(am__untar) < result.tar
AC_DEFUN([_AM_PROG_TAR],
-[# Always define AMTAR for backward compatibility.
-AM_MISSING_PROG([AMTAR], [tar])
+[# Always define AMTAR for backward compatibility. Yes, it's still used
+# in the wild :-( We should find a proper way to deprecate it ...
+AC_SUBST([AMTAR], ['$${TAR-tar}'])
m4_if([$1], [v7],
- [am__tar='${AMTAR} chof - "$$tardir"'; am__untar='${AMTAR} xf -'],
+ [am__tar='$${TAR-tar} chof - "$$tardir"' am__untar='$${TAR-tar} xf -'],
[m4_case([$1], [ustar],, [pax],,
[m4_fatal([Unknown tar format])])
AC_MSG_CHECKING([how to create a $1 tar archive])
@@ -968,7 +1192,7 @@ AC_MSG_CHECKING([how to create a $1 tar archive])
_am_tools='gnutar m4_if([$1], [ustar], [plaintar]) pax cpio none'
_am_tools=${am_cv_prog_tar_$1-$_am_tools}
# Do not fold the above two line into one, because Tru64 sh and
-# Solaris sh will not grok spaces in the rhs of `-'.
+# Solaris sh will not grok spaces in the rhs of '-'.
for _am_tool in $_am_tools
do
case $_am_tool in
diff --git a/ar-lib b/ar-lib
new file mode 100755
index 0000000..67f5f36
--- /dev/null
+++ b/ar-lib
@@ -0,0 +1,270 @@
+#! /bin/sh
+# Wrapper for Microsoft lib.exe
+
+me=ar-lib
+scriptversion=2012-03-01.08; # UTC
+
+# Copyright (C) 2010-2012 Free Software Foundation, Inc.
+# Written by Peter Rosin <peda at lysator.liu.se>.
+#
+# This program is free software; you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation; either version 2, or (at your option)
+# any later version.
+#
+# This program is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+# GNU General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with this program. If not, see <http://www.gnu.org/licenses/>.
+
+# As a special exception to the GNU General Public License, if you
+# distribute this file as part of a program that contains a
+# configuration script generated by Autoconf, you may include it under
+# the same distribution terms that you use for the rest of that program.
+
+# This file is maintained in Automake, please report
+# bugs to <bug-automake at gnu.org> or send patches to
+# <automake-patches at gnu.org>.
+
+
+# func_error message
+func_error ()
+{
+ echo "$me: $1" 1>&2
+ exit 1
+}
+
+file_conv=
+
+# func_file_conv build_file
+# Convert a $build file to $host form and store it in $file
+# Currently only supports Windows hosts.
+func_file_conv ()
+{
+ file=$1
+ case $file in
+ / | /[!/]*) # absolute file, and not a UNC file
+ if test -z "$file_conv"; then
+ # lazily determine how to convert abs files
+ case `uname -s` in
+ MINGW*)
+ file_conv=mingw
+ ;;
+ CYGWIN*)
+ file_conv=cygwin
+ ;;
+ *)
+ file_conv=wine
+ ;;
+ esac
+ fi
+ case $file_conv in
+ mingw)
+ file=`cmd //C echo "$file " | sed -e 's/"\(.*\) " *$/\1/'`
+ ;;
+ cygwin)
+ file=`cygpath -m "$file" || echo "$file"`
+ ;;
+ wine)
+ file=`winepath -w "$file" || echo "$file"`
+ ;;
+ esac
+ ;;
+ esac
+}
+
+# func_at_file at_file operation archive
+# Iterate over all members in AT_FILE performing OPERATION on ARCHIVE
+# for each of them.
+# When interpreting the content of the @FILE, do NOT use func_file_conv,
+# since the user would need to supply preconverted file names to
+# binutils ar, at least for MinGW.
+func_at_file ()
+{
+ operation=$2
+ archive=$3
+ at_file_contents=`cat "$1"`
+ eval set x "$at_file_contents"
+ shift
+
+ for member
+ do
+ $AR -NOLOGO $operation:"$member" "$archive" || exit $?
+ done
+}
+
+case $1 in
+ '')
+ func_error "no command. Try '$0 --help' for more information."
+ ;;
+ -h | --h*)
+ cat <<EOF
+Usage: $me [--help] [--version] PROGRAM ACTION ARCHIVE [MEMBER...]
+
+Members may be specified in a file named with @FILE.
+EOF
+ exit $?
+ ;;
+ -v | --v*)
+ echo "$me, version $scriptversion"
+ exit $?
+ ;;
+esac
+
+if test $# -lt 3; then
+ func_error "you must specify a program, an action and an archive"
+fi
+
+AR=$1
+shift
+while :
+do
+ if test $# -lt 2; then
+ func_error "you must specify a program, an action and an archive"
+ fi
+ case $1 in
+ -lib | -LIB \
+ | -ltcg | -LTCG \
+ | -machine* | -MACHINE* \
+ | -subsystem* | -SUBSYSTEM* \
+ | -verbose | -VERBOSE \
+ | -wx* | -WX* )
+ AR="$AR $1"
+ shift
+ ;;
+ *)
+ action=$1
+ shift
+ break
+ ;;
+ esac
+done
+orig_archive=$1
+shift
+func_file_conv "$orig_archive"
+archive=$file
+
+# strip leading dash in $action
+action=${action#-}
+
+delete=
+extract=
+list=
+quick=
+replace=
+index=
+create=
+
+while test -n "$action"
+do
+ case $action in
+ d*) delete=yes ;;
+ x*) extract=yes ;;
+ t*) list=yes ;;
+ q*) quick=yes ;;
+ r*) replace=yes ;;
+ s*) index=yes ;;
+ S*) ;; # the index is always updated implicitly
+ c*) create=yes ;;
+ u*) ;; # TODO: don't ignore the update modifier
+ v*) ;; # TODO: don't ignore the verbose modifier
+ *)
+ func_error "unknown action specified"
+ ;;
+ esac
+ action=${action#?}
+done
+
+case $delete$extract$list$quick$replace,$index in
+ yes,* | ,yes)
+ ;;
+ yesyes*)
+ func_error "more than one action specified"
+ ;;
+ *)
+ func_error "no action specified"
+ ;;
+esac
+
+if test -n "$delete"; then
+ if test ! -f "$orig_archive"; then
+ func_error "archive not found"
+ fi
+ for member
+ do
+ case $1 in
+ @*)
+ func_at_file "${1#@}" -REMOVE "$archive"
+ ;;
+ *)
+ func_file_conv "$1"
+ $AR -NOLOGO -REMOVE:"$file" "$archive" || exit $?
+ ;;
+ esac
+ done
+
+elif test -n "$extract"; then
+ if test ! -f "$orig_archive"; then
+ func_error "archive not found"
+ fi
+ if test $# -gt 0; then
+ for member
+ do
+ case $1 in
+ @*)
+ func_at_file "${1#@}" -EXTRACT "$archive"
+ ;;
+ *)
+ func_file_conv "$1"
+ $AR -NOLOGO -EXTRACT:"$file" "$archive" || exit $?
+ ;;
+ esac
+ done
+ else
+ $AR -NOLOGO -LIST "$archive" | sed -e 's/\\/\\\\/g' | while read member
+ do
+ $AR -NOLOGO -EXTRACT:"$member" "$archive" || exit $?
+ done
+ fi
+
+elif test -n "$quick$replace"; then
+ if test ! -f "$orig_archive"; then
+ if test -z "$create"; then
+ echo "$me: creating $orig_archive"
+ fi
+ orig_archive=
+ else
+ orig_archive=$archive
+ fi
+
+ for member
+ do
+ case $1 in
+ @*)
+ func_file_conv "${1#@}"
+ set x "$@" "@$file"
+ ;;
+ *)
+ func_file_conv "$1"
+ set x "$@" "$file"
+ ;;
+ esac
+ shift
+ shift
+ done
+
+ if test -n "$orig_archive"; then
+ $AR -NOLOGO -OUT:"$archive" "$orig_archive" "$@" || exit $?
+ else
+ $AR -NOLOGO -OUT:"$archive" "$@" || exit $?
+ fi
+
+elif test -n "$list"; then
+ if test ! -f "$orig_archive"; then
+ func_error "archive not found"
+ fi
+ $AR -NOLOGO -LIST "$archive" || exit $?
+fi
diff --git a/config.h.in b/config.h.in
index 693eccf..3da512f 100644
--- a/config.h.in
+++ b/config.h.in
@@ -82,6 +82,9 @@
/* Define to the one symbol short name of this package. */
#undef PACKAGE_TARNAME
+/* Define to the home page for this package. */
+#undef PACKAGE_URL
+
/* Define to the version of this package. */
#undef PACKAGE_VERSION
@@ -94,6 +97,11 @@
/* Version number of package */
#undef VERSION
+/* Enable large inode numbers on Mac OS X 10.5. */
+#ifndef _DARWIN_USE_64_BIT_INODE
+# define _DARWIN_USE_64_BIT_INODE 1
+#endif
+
/* Number of bits in a file offset, on hosts where this is settable. */
#undef _FILE_OFFSET_BITS
@@ -115,5 +123,5 @@
/* Define to `int' if <sys/types.h> does not define. */
#undef pid_t
-/* Define to `unsigned' if <sys/types.h> does not define. */
+/* Define to `unsigned int' if <sys/types.h> does not define. */
#undef size_t
diff --git a/configure b/configure
index 9cb7b48..15df28d 100755
--- a/configure
+++ b/configure
@@ -1,83 +1,462 @@
#! /bin/sh
# Guess values for system-dependent variables and create Makefiles.
-# Generated by GNU Autoconf 2.59 for tophat 2.0.13.
+# Generated by GNU Autoconf 2.69 for tophat 2.0.14.
#
# Report bugs to <tophat.cufflinks at gmail.com>.
#
-# Copyright (C) 2003 Free Software Foundation, Inc.
+#
+# Copyright (C) 1992-1996, 1998-2012 Free Software Foundation, Inc.
+#
+#
# This configure script is free software; the Free Software Foundation
# gives unlimited permission to copy, distribute and modify it.
-## --------------------- ##
-## M4sh Initialization. ##
-## --------------------- ##
+## -------------------- ##
+## M4sh Initialization. ##
+## -------------------- ##
-# Be Bourne compatible
-if test -n "${ZSH_VERSION+set}" && (emulate sh) >/dev/null 2>&1; then
+# Be more Bourne compatible
+DUALCASE=1; export DUALCASE # for MKS sh
+if test -n "${ZSH_VERSION+set}" && (emulate sh) >/dev/null 2>&1; then :
emulate sh
NULLCMD=:
- # Zsh 3.x and 4.x performs word splitting on ${1+"$@"}, which
+ # Pre-4.2 versions of Zsh do word splitting on ${1+"$@"}, which
# is contrary to our usage. Disable this feature.
alias -g '${1+"$@"}'='"$@"'
-elif test -n "${BASH_VERSION+set}" && (set -o posix) >/dev/null 2>&1; then
- set -o posix
+ setopt NO_GLOB_SUBST
+else
+ case `(set -o) 2>/dev/null` in #(
+ *posix*) :
+ set -o posix ;; #(
+ *) :
+ ;;
+esac
fi
-DUALCASE=1; export DUALCASE # for MKS sh
-# Support unset when possible.
-if ( (MAIL=60; unset MAIL) || exit) >/dev/null 2>&1; then
- as_unset=unset
-else
- as_unset=false
+
+as_nl='
+'
+export as_nl
+# Printing a long string crashes Solaris 7 /usr/bin/printf.
+as_echo='\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\'
+as_echo=$as_echo$as_echo$as_echo$as_echo$as_echo
+as_echo=$as_echo$as_echo$as_echo$as_echo$as_echo$as_echo
+# Prefer a ksh shell builtin over an external printf program on Solaris,
+# but without wasting forks for bash or zsh.
+if test -z "$BASH_VERSION$ZSH_VERSION" \
+ && (test "X`print -r -- $as_echo`" = "X$as_echo") 2>/dev/null; then
+ as_echo='print -r --'
+ as_echo_n='print -rn --'
+elif (test "X`printf %s $as_echo`" = "X$as_echo") 2>/dev/null; then
+ as_echo='printf %s\n'
+ as_echo_n='printf %s'
+else
+ if test "X`(/usr/ucb/echo -n -n $as_echo) 2>/dev/null`" = "X-n $as_echo"; then
+ as_echo_body='eval /usr/ucb/echo -n "$1$as_nl"'
+ as_echo_n='/usr/ucb/echo -n'
+ else
+ as_echo_body='eval expr "X$1" : "X\\(.*\\)"'
+ as_echo_n_body='eval
+ arg=$1;
+ case $arg in #(
+ *"$as_nl"*)
+ expr "X$arg" : "X\\(.*\\)$as_nl";
+ arg=`expr "X$arg" : ".*$as_nl\\(.*\\)"`;;
+ esac;
+ expr "X$arg" : "X\\(.*\\)" | tr -d "$as_nl"
+ '
+ export as_echo_n_body
+ as_echo_n='sh -c $as_echo_n_body as_echo'
+ fi
+ export as_echo_body
+ as_echo='sh -c $as_echo_body as_echo'
+fi
+
+# The user is always right.
+if test "${PATH_SEPARATOR+set}" != set; then
+ PATH_SEPARATOR=:
+ (PATH='/bin;/bin'; FPATH=$PATH; sh -c :) >/dev/null 2>&1 && {
+ (PATH='/bin:/bin'; FPATH=$PATH; sh -c :) >/dev/null 2>&1 ||
+ PATH_SEPARATOR=';'
+ }
fi
-# Work around bugs in pre-3.0 UWIN ksh.
-$as_unset ENV MAIL MAILPATH
+# IFS
+# We need space, tab and new line, in precisely that order. Quoting is
+# there to prevent editors from complaining about space-tab.
+# (If _AS_PATH_WALK were called with IFS unset, it would disable word
+# splitting by setting IFS to empty value.)
+IFS=" "" $as_nl"
+
+# Find who we are. Look in the path if we contain no directory separator.
+as_myself=
+case $0 in #((
+ *[\\/]* ) as_myself=$0 ;;
+ *) as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
+for as_dir in $PATH
+do
+ IFS=$as_save_IFS
+ test -z "$as_dir" && as_dir=.
+ test -r "$as_dir/$0" && as_myself=$as_dir/$0 && break
+ done
+IFS=$as_save_IFS
+
+ ;;
+esac
+# We did not find ourselves, most probably we were run as `sh COMMAND'
+# in which case we are not to be found in the path.
+if test "x$as_myself" = x; then
+ as_myself=$0
+fi
+if test ! -f "$as_myself"; then
+ $as_echo "$as_myself: error: cannot find myself; rerun with an absolute file name" >&2
+ exit 1
+fi
+
+# Unset variables that we do not need and which cause bugs (e.g. in
+# pre-3.0 UWIN ksh). But do not cause bugs in bash 2.01; the "|| exit 1"
+# suppresses any "Segmentation fault" message there. '((' could
+# trigger a bug in pdksh 5.2.14.
+for as_var in BASH_ENV ENV MAIL MAILPATH
+do eval test x\${$as_var+set} = xset \
+ && ( (unset $as_var) || exit 1) >/dev/null 2>&1 && unset $as_var || :
+done
PS1='$ '
PS2='> '
PS4='+ '
# NLS nuisances.
-for as_var in \
- LANG LANGUAGE LC_ADDRESS LC_ALL LC_COLLATE LC_CTYPE LC_IDENTIFICATION \
- LC_MEASUREMENT LC_MESSAGES LC_MONETARY LC_NAME LC_NUMERIC LC_PAPER \
- LC_TELEPHONE LC_TIME
+LC_ALL=C
+export LC_ALL
+LANGUAGE=C
+export LANGUAGE
+
+# CDPATH.
+(unset CDPATH) >/dev/null 2>&1 && unset CDPATH
+
+# Use a proper internal environment variable to ensure we don't fall
+ # into an infinite loop, continuously re-executing ourselves.
+ if test x"${_as_can_reexec}" != xno && test "x$CONFIG_SHELL" != x; then
+ _as_can_reexec=no; export _as_can_reexec;
+ # We cannot yet assume a decent shell, so we have to provide a
+# neutralization value for shells without unset; and this also
+# works around shells that cannot unset nonexistent variables.
+# Preserve -v and -x to the replacement shell.
+BASH_ENV=/dev/null
+ENV=/dev/null
+(unset BASH_ENV) >/dev/null 2>&1 && unset BASH_ENV ENV
+case $- in # ((((
+ *v*x* | *x*v* ) as_opts=-vx ;;
+ *v* ) as_opts=-v ;;
+ *x* ) as_opts=-x ;;
+ * ) as_opts= ;;
+esac
+exec $CONFIG_SHELL $as_opts "$as_myself" ${1+"$@"}
+# Admittedly, this is quite paranoid, since all the known shells bail
+# out after a failed `exec'.
+$as_echo "$0: could not re-execute with $CONFIG_SHELL" >&2
+as_fn_exit 255
+ fi
+ # We don't want this to propagate to other subprocesses.
+ { _as_can_reexec=; unset _as_can_reexec;}
+if test "x$CONFIG_SHELL" = x; then
+ as_bourne_compatible="if test -n \"\${ZSH_VERSION+set}\" && (emulate sh) >/dev/null 2>&1; then :
+ emulate sh
+ NULLCMD=:
+ # Pre-4.2 versions of Zsh do word splitting on \${1+\"\$@\"}, which
+ # is contrary to our usage. Disable this feature.
+ alias -g '\${1+\"\$@\"}'='\"\$@\"'
+ setopt NO_GLOB_SUBST
+else
+ case \`(set -o) 2>/dev/null\` in #(
+ *posix*) :
+ set -o posix ;; #(
+ *) :
+ ;;
+esac
+fi
+"
+ as_required="as_fn_return () { (exit \$1); }
+as_fn_success () { as_fn_return 0; }
+as_fn_failure () { as_fn_return 1; }
+as_fn_ret_success () { return 0; }
+as_fn_ret_failure () { return 1; }
+
+exitcode=0
+as_fn_success || { exitcode=1; echo as_fn_success failed.; }
+as_fn_failure && { exitcode=1; echo as_fn_failure succeeded.; }
+as_fn_ret_success || { exitcode=1; echo as_fn_ret_success failed.; }
+as_fn_ret_failure && { exitcode=1; echo as_fn_ret_failure succeeded.; }
+if ( set x; as_fn_ret_success y && test x = \"\$1\" ); then :
+
+else
+ exitcode=1; echo positional parameters were not saved.
+fi
+test x\$exitcode = x0 || exit 1
+test -x / || exit 1"
+ as_suggested=" as_lineno_1=";as_suggested=$as_suggested$LINENO;as_suggested=$as_suggested" as_lineno_1a=\$LINENO
+ as_lineno_2=";as_suggested=$as_suggested$LINENO;as_suggested=$as_suggested" as_lineno_2a=\$LINENO
+ eval 'test \"x\$as_lineno_1'\$as_run'\" != \"x\$as_lineno_2'\$as_run'\" &&
+ test \"x\`expr \$as_lineno_1'\$as_run' + 1\`\" = \"x\$as_lineno_2'\$as_run'\"' || exit 1
+test \$(( 1 + 1 )) = 2 || exit 1"
+ if (eval "$as_required") 2>/dev/null; then :
+ as_have_required=yes
+else
+ as_have_required=no
+fi
+ if test x$as_have_required = xyes && (eval "$as_suggested") 2>/dev/null; then :
+
+else
+ as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
+as_found=false
+for as_dir in /bin$PATH_SEPARATOR/usr/bin$PATH_SEPARATOR$PATH
do
- if (set +x; test -z "`(eval $as_var=C; export $as_var) 2>&1`"); then
- eval $as_var=C; export $as_var
+ IFS=$as_save_IFS
+ test -z "$as_dir" && as_dir=.
+ as_found=:
+ case $as_dir in #(
+ /*)
+ for as_base in sh bash ksh sh5; do
+ # Try only shells that exist, to save several forks.
+ as_shell=$as_dir/$as_base
+ if { test -f "$as_shell" || test -f "$as_shell.exe"; } &&
+ { $as_echo "$as_bourne_compatible""$as_required" | as_run=a "$as_shell"; } 2>/dev/null; then :
+ CONFIG_SHELL=$as_shell as_have_required=yes
+ if { $as_echo "$as_bourne_compatible""$as_suggested" | as_run=a "$as_shell"; } 2>/dev/null; then :
+ break 2
+fi
+fi
+ done;;
+ esac
+ as_found=false
+done
+$as_found || { if { test -f "$SHELL" || test -f "$SHELL.exe"; } &&
+ { $as_echo "$as_bourne_compatible""$as_required" | as_run=a "$SHELL"; } 2>/dev/null; then :
+ CONFIG_SHELL=$SHELL as_have_required=yes
+fi; }
+IFS=$as_save_IFS
+
+
+ if test "x$CONFIG_SHELL" != x; then :
+ export CONFIG_SHELL
+ # We cannot yet assume a decent shell, so we have to provide a
+# neutralization value for shells without unset; and this also
+# works around shells that cannot unset nonexistent variables.
+# Preserve -v and -x to the replacement shell.
+BASH_ENV=/dev/null
+ENV=/dev/null
+(unset BASH_ENV) >/dev/null 2>&1 && unset BASH_ENV ENV
+case $- in # ((((
+ *v*x* | *x*v* ) as_opts=-vx ;;
+ *v* ) as_opts=-v ;;
+ *x* ) as_opts=-x ;;
+ * ) as_opts= ;;
+esac
+exec $CONFIG_SHELL $as_opts "$as_myself" ${1+"$@"}
+# Admittedly, this is quite paranoid, since all the known shells bail
+# out after a failed `exec'.
+$as_echo "$0: could not re-execute with $CONFIG_SHELL" >&2
+exit 255
+fi
+
+ if test x$as_have_required = xno; then :
+ $as_echo "$0: This script requires a shell more modern than all"
+ $as_echo "$0: the shells that I found on your system."
+ if test x${ZSH_VERSION+set} = xset ; then
+ $as_echo "$0: In particular, zsh $ZSH_VERSION has bugs and should"
+ $as_echo "$0: be upgraded to zsh 4.3.4 or later."
else
- $as_unset $as_var
+ $as_echo "$0: Please tell bug-autoconf at gnu.org and
+$0: tophat.cufflinks at gmail.com about your system, including
+$0: any error possibly output before this message. Then
+$0: install a modern shell, or manually run the script
+$0: under such a shell if you do have one."
fi
-done
+ exit 1
+fi
+fi
+fi
+SHELL=${CONFIG_SHELL-/bin/sh}
+export SHELL
+# Unset more variables known to interfere with behavior of common tools.
+CLICOLOR_FORCE= GREP_OPTIONS=
+unset CLICOLOR_FORCE GREP_OPTIONS
+
+## --------------------- ##
+## M4sh Shell Functions. ##
+## --------------------- ##
+# as_fn_unset VAR
+# ---------------
+# Portably unset VAR.
+as_fn_unset ()
+{
+ { eval $1=; unset $1;}
+}
+as_unset=as_fn_unset
-# Required to use basename.
-if expr a : '\(a\)' >/dev/null 2>&1; then
+# as_fn_set_status STATUS
+# -----------------------
+# Set $? to STATUS, without forking.
+as_fn_set_status ()
+{
+ return $1
+} # as_fn_set_status
+
+# as_fn_exit STATUS
+# -----------------
+# Exit the shell with STATUS, even in a "trap 0" or "set -e" context.
+as_fn_exit ()
+{
+ set +e
+ as_fn_set_status $1
+ exit $1
+} # as_fn_exit
+
+# as_fn_mkdir_p
+# -------------
+# Create "$as_dir" as a directory, including parents if necessary.
+as_fn_mkdir_p ()
+{
+
+ case $as_dir in #(
+ -*) as_dir=./$as_dir;;
+ esac
+ test -d "$as_dir" || eval $as_mkdir_p || {
+ as_dirs=
+ while :; do
+ case $as_dir in #(
+ *\'*) as_qdir=`$as_echo "$as_dir" | sed "s/'/'\\\\\\\\''/g"`;; #'(
+ *) as_qdir=$as_dir;;
+ esac
+ as_dirs="'$as_qdir' $as_dirs"
+ as_dir=`$as_dirname -- "$as_dir" ||
+$as_expr X"$as_dir" : 'X\(.*[^/]\)//*[^/][^/]*/*$' \| \
+ X"$as_dir" : 'X\(//\)[^/]' \| \
+ X"$as_dir" : 'X\(//\)$' \| \
+ X"$as_dir" : 'X\(/\)' \| . 2>/dev/null ||
+$as_echo X"$as_dir" |
+ sed '/^X\(.*[^/]\)\/\/*[^/][^/]*\/*$/{
+ s//\1/
+ q
+ }
+ /^X\(\/\/\)[^/].*/{
+ s//\1/
+ q
+ }
+ /^X\(\/\/\)$/{
+ s//\1/
+ q
+ }
+ /^X\(\/\).*/{
+ s//\1/
+ q
+ }
+ s/.*/./; q'`
+ test -d "$as_dir" && break
+ done
+ test -z "$as_dirs" || eval "mkdir $as_dirs"
+ } || test -d "$as_dir" || as_fn_error $? "cannot create directory $as_dir"
+
+
+} # as_fn_mkdir_p
+
+# as_fn_executable_p FILE
+# -----------------------
+# Test if FILE is an executable regular file.
+as_fn_executable_p ()
+{
+ test -f "$1" && test -x "$1"
+} # as_fn_executable_p
+# as_fn_append VAR VALUE
+# ----------------------
+# Append the text in VALUE to the end of the definition contained in VAR. Take
+# advantage of any shell optimizations that allow amortized linear growth over
+# repeated appends, instead of the typical quadratic growth present in naive
+# implementations.
+if (eval "as_var=1; as_var+=2; test x\$as_var = x12") 2>/dev/null; then :
+ eval 'as_fn_append ()
+ {
+ eval $1+=\$2
+ }'
+else
+ as_fn_append ()
+ {
+ eval $1=\$$1\$2
+ }
+fi # as_fn_append
+
+# as_fn_arith ARG...
+# ------------------
+# Perform arithmetic evaluation on the ARGs, and store the result in the
+# global $as_val. Take advantage of shells that can avoid forks. The arguments
+# must be portable across $(()) and expr.
+if (eval "test \$(( 1 + 1 )) = 2") 2>/dev/null; then :
+ eval 'as_fn_arith ()
+ {
+ as_val=$(( $* ))
+ }'
+else
+ as_fn_arith ()
+ {
+ as_val=`expr "$@" || test $? -eq 1`
+ }
+fi # as_fn_arith
+
+
+# as_fn_error STATUS ERROR [LINENO LOG_FD]
+# ----------------------------------------
+# Output "`basename $0`: error: ERROR" to stderr. If LINENO and LOG_FD are
+# provided, also output the error to LOG_FD, referencing LINENO. Then exit the
+# script with STATUS, using 1 if that was 0.
+as_fn_error ()
+{
+ as_status=$1; test $as_status -eq 0 && as_status=1
+ if test "$4"; then
+ as_lineno=${as_lineno-"$3"} as_lineno_stack=as_lineno_stack=$as_lineno_stack
+ $as_echo "$as_me:${as_lineno-$LINENO}: error: $2" >&$4
+ fi
+ $as_echo "$as_me: error: $2" >&2
+ as_fn_exit $as_status
+} # as_fn_error
+
+if expr a : '\(a\)' >/dev/null 2>&1 &&
+ test "X`expr 00001 : '.*\(...\)'`" = X001; then
as_expr=expr
else
as_expr=false
fi
-if (basename /) >/dev/null 2>&1 && test "X`basename / 2>&1`" = "X/"; then
+if (basename -- /) >/dev/null 2>&1 && test "X`basename -- / 2>&1`" = "X/"; then
as_basename=basename
else
as_basename=false
fi
+if (as_dir=`dirname -- /` && test "X$as_dir" = X/) >/dev/null 2>&1; then
+ as_dirname=dirname
+else
+ as_dirname=false
+fi
-# Name of the executable.
-as_me=`$as_basename "$0" ||
+as_me=`$as_basename -- "$0" ||
$as_expr X/"$0" : '.*/\([^/][^/]*\)/*$' \| \
X"$0" : 'X\(//\)$' \| \
- X"$0" : 'X\(/\)$' \| \
- . : '\(.\)' 2>/dev/null ||
-echo X/"$0" |
- sed '/^.*\/\([^/][^/]*\)\/*$/{ s//\1/; q; }
- /^X\/\(\/\/\)$/{ s//\1/; q; }
- /^X\/\(\/\).*/{ s//\1/; q; }
- s/.*/./; q'`
-
+ X"$0" : 'X\(/\)' \| . 2>/dev/null ||
+$as_echo X/"$0" |
+ sed '/^.*\/\([^/][^/]*\)\/*$/{
+ s//\1/
+ q
+ }
+ /^X\/\(\/\/\)$/{
+ s//\1/
+ q
+ }
+ /^X\/\(\/\).*/{
+ s//\1/
+ q
+ }
+ s/.*/./; q'`
-# PATH needs CR, and LINENO needs CR and PATH.
# Avoid depending upon Character Ranges.
as_cr_letters='abcdefghijklmnopqrstuvwxyz'
as_cr_LETTERS='ABCDEFGHIJKLMNOPQRSTUVWXYZ'
@@ -85,146 +464,91 @@ as_cr_Letters=$as_cr_letters$as_cr_LETTERS
as_cr_digits='0123456789'
as_cr_alnum=$as_cr_Letters$as_cr_digits
-# The user is always right.
-if test "${PATH_SEPARATOR+set}" != set; then
- echo "#! /bin/sh" >conf$$.sh
- echo "exit 0" >>conf$$.sh
- chmod +x conf$$.sh
- if (PATH="/nonexistent;."; conf$$.sh) >/dev/null 2>&1; then
- PATH_SEPARATOR=';'
- else
- PATH_SEPARATOR=:
- fi
- rm -f conf$$.sh
-fi
-
-
- as_lineno_1=$LINENO
- as_lineno_2=$LINENO
- as_lineno_3=`(expr $as_lineno_1 + 1) 2>/dev/null`
- test "x$as_lineno_1" != "x$as_lineno_2" &&
- test "x$as_lineno_3" = "x$as_lineno_2" || {
- # Find who we are. Look in the path if we contain no path at all
- # relative or not.
- case $0 in
- *[\\/]* ) as_myself=$0 ;;
- *) as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
-for as_dir in $PATH
-do
- IFS=$as_save_IFS
- test -z "$as_dir" && as_dir=.
- test -r "$as_dir/$0" && as_myself=$as_dir/$0 && break
-done
-
- ;;
- esac
- # We did not find ourselves, most probably we were run as `sh COMMAND'
- # in which case we are not to be found in the path.
- if test "x$as_myself" = x; then
- as_myself=$0
- fi
- if test ! -f "$as_myself"; then
- { echo "$as_me: error: cannot find myself; rerun with an absolute path" >&2
- { (exit 1); exit 1; }; }
- fi
- case $CONFIG_SHELL in
- '')
- as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
-for as_dir in /bin$PATH_SEPARATOR/usr/bin$PATH_SEPARATOR$PATH
-do
- IFS=$as_save_IFS
- test -z "$as_dir" && as_dir=.
- for as_base in sh bash ksh sh5; do
- case $as_dir in
- /*)
- if ("$as_dir/$as_base" -c '
- as_lineno_1=$LINENO
- as_lineno_2=$LINENO
- as_lineno_3=`(expr $as_lineno_1 + 1) 2>/dev/null`
- test "x$as_lineno_1" != "x$as_lineno_2" &&
- test "x$as_lineno_3" = "x$as_lineno_2" ') 2>/dev/null; then
- $as_unset BASH_ENV || test "${BASH_ENV+set}" != set || { BASH_ENV=; export BASH_ENV; }
- $as_unset ENV || test "${ENV+set}" != set || { ENV=; export ENV; }
- CONFIG_SHELL=$as_dir/$as_base
- export CONFIG_SHELL
- exec "$CONFIG_SHELL" "$0" ${1+"$@"}
- fi;;
- esac
- done
-done
-;;
- esac
- # Create $as_me.lineno as a copy of $as_myself, but with $LINENO
- # uniformly replaced by the line number. The first 'sed' inserts a
- # line-number line before each line; the second 'sed' does the real
- # work. The second script uses 'N' to pair each line-number line
- # with the numbered line, and appends trailing '-' during
- # substitution so that $LINENO is not a special case at line end.
- # (Raja R Harinath suggested sed '=', and Paul Eggert wrote the
- # second 'sed' script. Blame Lee E. McMahon for sed's syntax. :-)
- sed '=' <$as_myself |
+ as_lineno_1=$LINENO as_lineno_1a=$LINENO
+ as_lineno_2=$LINENO as_lineno_2a=$LINENO
+ eval 'test "x$as_lineno_1'$as_run'" != "x$as_lineno_2'$as_run'" &&
+ test "x`expr $as_lineno_1'$as_run' + 1`" = "x$as_lineno_2'$as_run'"' || {
+ # Blame Lee E. McMahon (1931-1989) for sed's syntax. :-)
+ sed -n '
+ p
+ /[$]LINENO/=
+ ' <$as_myself |
sed '
+ s/[$]LINENO.*/&-/
+ t lineno
+ b
+ :lineno
N
- s,$,-,
- : loop
- s,^\(['$as_cr_digits']*\)\(.*\)[$]LINENO\([^'$as_cr_alnum'_]\),\1\2\1\3,
+ :loop
+ s/[$]LINENO\([^'$as_cr_alnum'_].*\n\)\(.*\)/\2\1\2/
t loop
- s,-$,,
- s,^['$as_cr_digits']*\n,,
+ s/-\n.*//
' >$as_me.lineno &&
- chmod +x $as_me.lineno ||
- { echo "$as_me: error: cannot create $as_me.lineno; rerun with a POSIX shell" >&2
- { (exit 1); exit 1; }; }
+ chmod +x "$as_me.lineno" ||
+ { $as_echo "$as_me: error: cannot create $as_me.lineno; rerun with a POSIX shell" >&2; as_fn_exit 1; }
+ # If we had to re-execute with $CONFIG_SHELL, we're ensured to have
+ # already done that, so ensure we don't try to do so again and fall
+ # in an infinite loop. This has already happened in practice.
+ _as_can_reexec=no; export _as_can_reexec
# Don't try to exec as it changes $[0], causing all sort of problems
# (the dirname of $[0] is not the place where we might find the
- # original and so on. Autoconf is especially sensible to this).
- . ./$as_me.lineno
+ # original and so on. Autoconf is especially sensitive to this).
+ . "./$as_me.lineno"
# Exit status is that of the last command.
exit
}
-
-case `echo "testing\c"; echo 1,2,3`,`echo -n testing; echo 1,2,3` in
- *c*,-n*) ECHO_N= ECHO_C='
-' ECHO_T=' ' ;;
- *c*,* ) ECHO_N=-n ECHO_C= ECHO_T= ;;
- *) ECHO_N= ECHO_C='\c' ECHO_T= ;;
+ECHO_C= ECHO_N= ECHO_T=
+case `echo -n x` in #(((((
+-n*)
+ case `echo 'xy\c'` in
+ *c*) ECHO_T=' ';; # ECHO_T is single tab character.
+ xy) ECHO_C='\c';;
+ *) echo `echo ksh88 bug on AIX 6.1` > /dev/null
+ ECHO_T=' ';;
+ esac;;
+*)
+ ECHO_N='-n';;
esac
-if expr a : '\(a\)' >/dev/null 2>&1; then
- as_expr=expr
+rm -f conf$$ conf$$.exe conf$$.file
+if test -d conf$$.dir; then
+ rm -f conf$$.dir/conf$$.file
else
- as_expr=false
+ rm -f conf$$.dir
+ mkdir conf$$.dir 2>/dev/null
fi
-
-rm -f conf$$ conf$$.exe conf$$.file
-echo >conf$$.file
-if ln -s conf$$.file conf$$ 2>/dev/null; then
- # We could just check for DJGPP; but this test a) works b) is more generic
- # and c) will remain valid once DJGPP supports symlinks (DJGPP 2.04).
- if test -f conf$$.exe; then
- # Don't use ln at all; we don't have any links
- as_ln_s='cp -p'
- else
+if (echo >conf$$.file) 2>/dev/null; then
+ if ln -s conf$$.file conf$$ 2>/dev/null; then
as_ln_s='ln -s'
+ # ... but there are two gotchas:
+ # 1) On MSYS, both `ln -s file dir' and `ln file dir' fail.
+ # 2) DJGPP < 2.04 has no symlinks; `ln -s' creates a wrapper executable.
+ # In both cases, we have to default to `cp -pR'.
+ ln -s conf$$.file conf$$.dir 2>/dev/null && test ! -f conf$$.exe ||
+ as_ln_s='cp -pR'
+ elif ln conf$$.file conf$$ 2>/dev/null; then
+ as_ln_s=ln
+ else
+ as_ln_s='cp -pR'
fi
-elif ln conf$$.file conf$$ 2>/dev/null; then
- as_ln_s=ln
else
- as_ln_s='cp -p'
+ as_ln_s='cp -pR'
fi
-rm -f conf$$ conf$$.exe conf$$.file
+rm -f conf$$ conf$$.exe conf$$.dir/conf$$.file conf$$.file
+rmdir conf$$.dir 2>/dev/null
if mkdir -p . 2>/dev/null; then
- as_mkdir_p=:
+ as_mkdir_p='mkdir -p "$as_dir"'
else
test -d ./-p && rmdir ./-p
as_mkdir_p=false
fi
-as_executable_p="test -f"
+as_test_x='test -x'
+as_executable_p=as_fn_executable_p
# Sed expression to map a string onto a valid CPP name.
as_tr_cpp="eval sed 'y%*$as_cr_letters%P$as_cr_LETTERS%;s%[^_$as_cr_alnum]%_%g'"
@@ -233,90 +557,220 @@ as_tr_cpp="eval sed 'y%*$as_cr_letters%P$as_cr_LETTERS%;s%[^_$as_cr_alnum]%_%g'"
as_tr_sh="eval sed 'y%*+%pp%;s%[^_$as_cr_alnum]%_%g'"
-# IFS
-# We need space, tab and new line, in precisely that order.
-as_nl='
-'
-IFS=" $as_nl"
-
-# CDPATH.
-$as_unset CDPATH
-
+test -n "$DJDIR" || exec 7<&0 </dev/null
+exec 6>&1
# Name of the host.
-# hostname on some systems (SVR3.2, Linux) returns a bogus exit status,
+# hostname on some systems (SVR3.2, old GNU/Linux) returns a bogus exit status,
# so uname gets run too.
ac_hostname=`(hostname || uname -n) 2>/dev/null | sed 1q`
-exec 6>&1
-
#
# Initializations.
#
ac_default_prefix=/usr/local
+ac_clean_files=
ac_config_libobj_dir=.
+LIBOBJS=
cross_compiling=no
subdirs=
MFLAGS=
MAKEFLAGS=
-SHELL=${CONFIG_SHELL-/bin/sh}
-
-# Maximum number of lines to put in a shell here document.
-# This variable seems obsolete. It should probably be removed, and
-# only ac_max_sed_lines should be used.
-: ${ac_max_here_lines=38}
# Identity of this package.
PACKAGE_NAME='tophat'
PACKAGE_TARNAME='tophat'
-PACKAGE_VERSION='2.0.13'
-PACKAGE_STRING='tophat 2.0.13'
+PACKAGE_VERSION='2.0.14'
+PACKAGE_STRING='tophat 2.0.14'
PACKAGE_BUGREPORT='tophat.cufflinks at gmail.com'
+PACKAGE_URL=''
ac_unique_file="config.h.in"
# Factoring default headers for most tests.
ac_includes_default="\
#include <stdio.h>
-#if HAVE_SYS_TYPES_H
+#ifdef HAVE_SYS_TYPES_H
# include <sys/types.h>
#endif
-#if HAVE_SYS_STAT_H
+#ifdef HAVE_SYS_STAT_H
# include <sys/stat.h>
#endif
-#if STDC_HEADERS
+#ifdef STDC_HEADERS
# include <stdlib.h>
# include <stddef.h>
#else
-# if HAVE_STDLIB_H
+# ifdef HAVE_STDLIB_H
# include <stdlib.h>
# endif
#endif
-#if HAVE_STRING_H
-# if !STDC_HEADERS && HAVE_MEMORY_H
+#ifdef HAVE_STRING_H
+# if !defined STDC_HEADERS && defined HAVE_MEMORY_H
# include <memory.h>
# endif
# include <string.h>
#endif
-#if HAVE_STRINGS_H
+#ifdef HAVE_STRINGS_H
# include <strings.h>
#endif
-#if HAVE_INTTYPES_H
+#ifdef HAVE_INTTYPES_H
# include <inttypes.h>
-#else
-# if HAVE_STDINT_H
-# include <stdint.h>
-# endif
#endif
-#if HAVE_UNISTD_H
+#ifdef HAVE_STDINT_H
+# include <stdint.h>
+#endif
+#ifdef HAVE_UNISTD_H
# include <unistd.h>
#endif"
-ac_subst_vars='SHELL PATH_SEPARATOR PACKAGE_NAME PACKAGE_TARNAME PACKAGE_VERSION PACKAGE_STRING PACKAGE_BUGREPORT exec_prefix prefix program_transform_name bindir sbindir libexecdir datadir sysconfdir sharedstatedir localstatedir libdir includedir oldincludedir infodir mandir build_alias host_alias target_alias DEFS ECHO_C ECHO_N ECHO_T LIBS INSTALL_PROGRAM INSTALL_SCRIPT INSTALL_DATA CYGPATH_W PACKAGE VERSION ACLOCAL AUTOCONF AUTOMAKE AUTOHEADER MAKEINFO install_sh STRIP ac_ct_STRIP INS [...]
+ac_subst_vars='am__EXEEXT_FALSE
+am__EXEEXT_TRUE
+LTLIBOBJS
+host_os
+host_vendor
+host_cpu
+host
+build_os
+build_vendor
+build_cpu
+build
+LIBOBJS
+EGREP
+GREP
+CXXCPP
+BAM_LIB
+BAM_LDFLAGS
+BAM_CPPFLAGS
+BOOST_THREAD_LIBS
+BOOST_LDFLAGS
+BOOST_CPPFLAGS
+pkgpyexecdir
+pyexecdir
+pkgpythondir
+pythondir
+PYTHON_PLATFORM
+PYTHON_EXEC_PREFIX
+PYTHON_PREFIX
+PYTHON_VERSION
+RANLIB
+am__fastdepCC_FALSE
+am__fastdepCC_TRUE
+CCDEPMODE
+ac_ct_CC
+CFLAGS
+CC
+ac_ct_AR
+AR
+am__fastdepCXX_FALSE
+am__fastdepCXX_TRUE
+CXXDEPMODE
+am__nodep
+AMDEPBACKSLASH
+AMDEP_FALSE
+AMDEP_TRUE
+am__quote
+am__include
+DEPDIR
+OBJEXT
+EXEEXT
+ac_ct_CXX
+CPPFLAGS
+LDFLAGS
+CXXFLAGS
+CXX
+PYTHON
+am__untar
+am__tar
+AMTAR
+am__leading_dot
+SET_MAKE
+AWK
+mkdir_p
+MKDIR_P
+INSTALL_STRIP_PROGRAM
+STRIP
+install_sh
+MAKEINFO
+AUTOHEADER
+AUTOMAKE
+AUTOCONF
+ACLOCAL
+VERSION
+PACKAGE
+CYGPATH_W
+am__isrc
+INSTALL_DATA
+INSTALL_SCRIPT
+INSTALL_PROGRAM
+target_alias
+host_alias
+build_alias
+LIBS
+ECHO_T
+ECHO_N
+ECHO_C
+DEFS
+mandir
+localedir
+libdir
+psdir
+pdfdir
+dvidir
+htmldir
+infodir
+docdir
+oldincludedir
+includedir
+localstatedir
+sharedstatedir
+sysconfdir
+datadir
+datarootdir
+libexecdir
+sbindir
+bindir
+program_transform_name
+prefix
+exec_prefix
+PACKAGE_URL
+PACKAGE_BUGREPORT
+PACKAGE_STRING
+PACKAGE_VERSION
+PACKAGE_TARNAME
+PACKAGE_NAME
+PATH_SEPARATOR
+SHELL'
ac_subst_files=''
+ac_user_opts='
+enable_option_checking
+enable_dependency_tracking
+with_boost
+with_boost_libdir
+with_boost_thread
+enable_largefile
+enable_intel64
+enable_debug
+enable_optim
+'
+ ac_precious_vars='build_alias
+host_alias
+target_alias
+PYTHON
+CXX
+CXXFLAGS
+LDFLAGS
+LIBS
+CPPFLAGS
+CCC
+CC
+CFLAGS
+CXXCPP'
+
# Initialize some variables set by options.
ac_init_help=
ac_init_version=false
+ac_unrecognized_opts=
+ac_unrecognized_sep=
# The variables have the same names as the options, with
# dashes changed to underlines.
cache_file=/dev/null
@@ -339,34 +793,49 @@ x_libraries=NONE
# and all the variables that are supposed to be based on exec_prefix
# by default will actually change.
# Use braces instead of parens because sh, perl, etc. also accept them.
+# (The list follows the same order as the GNU Coding Standards.)
bindir='${exec_prefix}/bin'
sbindir='${exec_prefix}/sbin'
libexecdir='${exec_prefix}/libexec'
-datadir='${prefix}/share'
+datarootdir='${prefix}/share'
+datadir='${datarootdir}'
sysconfdir='${prefix}/etc'
sharedstatedir='${prefix}/com'
localstatedir='${prefix}/var'
-libdir='${exec_prefix}/lib'
includedir='${prefix}/include'
oldincludedir='/usr/include'
-infodir='${prefix}/info'
-mandir='${prefix}/man'
+docdir='${datarootdir}/doc/${PACKAGE_TARNAME}'
+infodir='${datarootdir}/info'
+htmldir='${docdir}'
+dvidir='${docdir}'
+pdfdir='${docdir}'
+psdir='${docdir}'
+libdir='${exec_prefix}/lib'
+localedir='${datarootdir}/locale'
+mandir='${datarootdir}/man'
ac_prev=
+ac_dashdash=
for ac_option
do
# If the previous option needs an argument, assign it.
if test -n "$ac_prev"; then
- eval "$ac_prev=\$ac_option"
+ eval $ac_prev=\$ac_option
ac_prev=
continue
fi
- ac_optarg=`expr "x$ac_option" : 'x[^=]*=\(.*\)'`
+ case $ac_option in
+ *=?*) ac_optarg=`expr "X$ac_option" : '[^=]*=\(.*\)'` ;;
+ *=) ac_optarg= ;;
+ *) ac_optarg=yes ;;
+ esac
# Accept the important Cygnus configure options, so we can diagnose typos.
- case $ac_option in
+ case $ac_dashdash$ac_option in
+ --)
+ ac_dashdash=yes ;;
-bindir | --bindir | --bindi | --bind | --bin | --bi)
ac_prev=bindir ;;
@@ -388,33 +857,59 @@ do
--config-cache | -C)
cache_file=config.cache ;;
- -datadir | --datadir | --datadi | --datad | --data | --dat | --da)
+ -datadir | --datadir | --datadi | --datad)
ac_prev=datadir ;;
- -datadir=* | --datadir=* | --datadi=* | --datad=* | --data=* | --dat=* \
- | --da=*)
+ -datadir=* | --datadir=* | --datadi=* | --datad=*)
datadir=$ac_optarg ;;
+ -datarootdir | --datarootdir | --datarootdi | --datarootd | --dataroot \
+ | --dataroo | --dataro | --datar)
+ ac_prev=datarootdir ;;
+ -datarootdir=* | --datarootdir=* | --datarootdi=* | --datarootd=* \
+ | --dataroot=* | --dataroo=* | --dataro=* | --datar=*)
+ datarootdir=$ac_optarg ;;
+
-disable-* | --disable-*)
- ac_feature=`expr "x$ac_option" : 'x-*disable-\(.*\)'`
+ ac_useropt=`expr "x$ac_option" : 'x-*disable-\(.*\)'`
# Reject names that are not valid shell variable names.
- expr "x$ac_feature" : ".*[^-_$as_cr_alnum]" >/dev/null &&
- { echo "$as_me: error: invalid feature name: $ac_feature" >&2
- { (exit 1); exit 1; }; }
- ac_feature=`echo $ac_feature | sed 's/-/_/g'`
- eval "enable_$ac_feature=no" ;;
+ expr "x$ac_useropt" : ".*[^-+._$as_cr_alnum]" >/dev/null &&
+ as_fn_error $? "invalid feature name: $ac_useropt"
+ ac_useropt_orig=$ac_useropt
+ ac_useropt=`$as_echo "$ac_useropt" | sed 's/[-+.]/_/g'`
+ case $ac_user_opts in
+ *"
+"enable_$ac_useropt"
+"*) ;;
+ *) ac_unrecognized_opts="$ac_unrecognized_opts$ac_unrecognized_sep--disable-$ac_useropt_orig"
+ ac_unrecognized_sep=', ';;
+ esac
+ eval enable_$ac_useropt=no ;;
+
+ -docdir | --docdir | --docdi | --doc | --do)
+ ac_prev=docdir ;;
+ -docdir=* | --docdir=* | --docdi=* | --doc=* | --do=*)
+ docdir=$ac_optarg ;;
+
+ -dvidir | --dvidir | --dvidi | --dvid | --dvi | --dv)
+ ac_prev=dvidir ;;
+ -dvidir=* | --dvidir=* | --dvidi=* | --dvid=* | --dvi=* | --dv=*)
+ dvidir=$ac_optarg ;;
-enable-* | --enable-*)
- ac_feature=`expr "x$ac_option" : 'x-*enable-\([^=]*\)'`
+ ac_useropt=`expr "x$ac_option" : 'x-*enable-\([^=]*\)'`
# Reject names that are not valid shell variable names.
- expr "x$ac_feature" : ".*[^-_$as_cr_alnum]" >/dev/null &&
- { echo "$as_me: error: invalid feature name: $ac_feature" >&2
- { (exit 1); exit 1; }; }
- ac_feature=`echo $ac_feature | sed 's/-/_/g'`
- case $ac_option in
- *=*) ac_optarg=`echo "$ac_optarg" | sed "s/'/'\\\\\\\\''/g"`;;
- *) ac_optarg=yes ;;
+ expr "x$ac_useropt" : ".*[^-+._$as_cr_alnum]" >/dev/null &&
+ as_fn_error $? "invalid feature name: $ac_useropt"
+ ac_useropt_orig=$ac_useropt
+ ac_useropt=`$as_echo "$ac_useropt" | sed 's/[-+.]/_/g'`
+ case $ac_user_opts in
+ *"
+"enable_$ac_useropt"
+"*) ;;
+ *) ac_unrecognized_opts="$ac_unrecognized_opts$ac_unrecognized_sep--enable-$ac_useropt_orig"
+ ac_unrecognized_sep=', ';;
esac
- eval "enable_$ac_feature='$ac_optarg'" ;;
+ eval enable_$ac_useropt=\$ac_optarg ;;
-exec-prefix | --exec_prefix | --exec-prefix | --exec-prefi \
| --exec-pref | --exec-pre | --exec-pr | --exec-p | --exec- \
@@ -441,6 +936,12 @@ do
-host=* | --host=* | --hos=* | --ho=*)
host_alias=$ac_optarg ;;
+ -htmldir | --htmldir | --htmldi | --htmld | --html | --htm | --ht)
+ ac_prev=htmldir ;;
+ -htmldir=* | --htmldir=* | --htmldi=* | --htmld=* | --html=* | --htm=* \
+ | --ht=*)
+ htmldir=$ac_optarg ;;
+
-includedir | --includedir | --includedi | --included | --include \
| --includ | --inclu | --incl | --inc)
ac_prev=includedir ;;
@@ -465,13 +966,16 @@ do
| --libexe=* | --libex=* | --libe=*)
libexecdir=$ac_optarg ;;
+ -localedir | --localedir | --localedi | --localed | --locale)
+ ac_prev=localedir ;;
+ -localedir=* | --localedir=* | --localedi=* | --localed=* | --locale=*)
+ localedir=$ac_optarg ;;
+
-localstatedir | --localstatedir | --localstatedi | --localstated \
- | --localstate | --localstat | --localsta | --localst \
- | --locals | --local | --loca | --loc | --lo)
+ | --localstate | --localstat | --localsta | --localst | --locals)
ac_prev=localstatedir ;;
-localstatedir=* | --localstatedir=* | --localstatedi=* | --localstated=* \
- | --localstate=* | --localstat=* | --localsta=* | --localst=* \
- | --locals=* | --local=* | --loca=* | --loc=* | --lo=*)
+ | --localstate=* | --localstat=* | --localsta=* | --localst=* | --locals=*)
localstatedir=$ac_optarg ;;
-mandir | --mandir | --mandi | --mand | --man | --ma | --m)
@@ -536,6 +1040,16 @@ do
| --progr-tra=* | --program-tr=* | --program-t=*)
program_transform_name=$ac_optarg ;;
+ -pdfdir | --pdfdir | --pdfdi | --pdfd | --pdf | --pd)
+ ac_prev=pdfdir ;;
+ -pdfdir=* | --pdfdir=* | --pdfdi=* | --pdfd=* | --pdf=* | --pd=*)
+ pdfdir=$ac_optarg ;;
+
+ -psdir | --psdir | --psdi | --psd | --ps)
+ ac_prev=psdir ;;
+ -psdir=* | --psdir=* | --psdi=* | --psd=* | --ps=*)
+ psdir=$ac_optarg ;;
+
-q | -quiet | --quiet | --quie | --qui | --qu | --q \
| -silent | --silent | --silen | --sile | --sil)
silent=yes ;;
@@ -586,26 +1100,36 @@ do
ac_init_version=: ;;
-with-* | --with-*)
- ac_package=`expr "x$ac_option" : 'x-*with-\([^=]*\)'`
+ ac_useropt=`expr "x$ac_option" : 'x-*with-\([^=]*\)'`
# Reject names that are not valid shell variable names.
- expr "x$ac_package" : ".*[^-_$as_cr_alnum]" >/dev/null &&
- { echo "$as_me: error: invalid package name: $ac_package" >&2
- { (exit 1); exit 1; }; }
- ac_package=`echo $ac_package| sed 's/-/_/g'`
- case $ac_option in
- *=*) ac_optarg=`echo "$ac_optarg" | sed "s/'/'\\\\\\\\''/g"`;;
- *) ac_optarg=yes ;;
+ expr "x$ac_useropt" : ".*[^-+._$as_cr_alnum]" >/dev/null &&
+ as_fn_error $? "invalid package name: $ac_useropt"
+ ac_useropt_orig=$ac_useropt
+ ac_useropt=`$as_echo "$ac_useropt" | sed 's/[-+.]/_/g'`
+ case $ac_user_opts in
+ *"
+"with_$ac_useropt"
+"*) ;;
+ *) ac_unrecognized_opts="$ac_unrecognized_opts$ac_unrecognized_sep--with-$ac_useropt_orig"
+ ac_unrecognized_sep=', ';;
esac
- eval "with_$ac_package='$ac_optarg'" ;;
+ eval with_$ac_useropt=\$ac_optarg ;;
-without-* | --without-*)
- ac_package=`expr "x$ac_option" : 'x-*without-\(.*\)'`
+ ac_useropt=`expr "x$ac_option" : 'x-*without-\(.*\)'`
# Reject names that are not valid shell variable names.
- expr "x$ac_package" : ".*[^-_$as_cr_alnum]" >/dev/null &&
- { echo "$as_me: error: invalid package name: $ac_package" >&2
- { (exit 1); exit 1; }; }
- ac_package=`echo $ac_package | sed 's/-/_/g'`
- eval "with_$ac_package=no" ;;
+ expr "x$ac_useropt" : ".*[^-+._$as_cr_alnum]" >/dev/null &&
+ as_fn_error $? "invalid package name: $ac_useropt"
+ ac_useropt_orig=$ac_useropt
+ ac_useropt=`$as_echo "$ac_useropt" | sed 's/[-+.]/_/g'`
+ case $ac_user_opts in
+ *"
+"with_$ac_useropt"
+"*) ;;
+ *) ac_unrecognized_opts="$ac_unrecognized_opts$ac_unrecognized_sep--without-$ac_useropt_orig"
+ ac_unrecognized_sep=', ';;
+ esac
+ eval with_$ac_useropt=no ;;
--x)
# Obsolete; use --with-x.
@@ -625,27 +1149,26 @@ do
| --x-librar=* | --x-libra=* | --x-libr=* | --x-lib=* | --x-li=* | --x-l=*)
x_libraries=$ac_optarg ;;
- -*) { echo "$as_me: error: unrecognized option: $ac_option
-Try \`$0 --help' for more information." >&2
- { (exit 1); exit 1; }; }
+ -*) as_fn_error $? "unrecognized option: \`$ac_option'
+Try \`$0 --help' for more information"
;;
*=*)
ac_envvar=`expr "x$ac_option" : 'x\([^=]*\)='`
# Reject names that are not valid shell variable names.
- expr "x$ac_envvar" : ".*[^_$as_cr_alnum]" >/dev/null &&
- { echo "$as_me: error: invalid variable name: $ac_envvar" >&2
- { (exit 1); exit 1; }; }
- ac_optarg=`echo "$ac_optarg" | sed "s/'/'\\\\\\\\''/g"`
- eval "$ac_envvar='$ac_optarg'"
+ case $ac_envvar in #(
+ '' | [0-9]* | *[!_$as_cr_alnum]* )
+ as_fn_error $? "invalid variable name: \`$ac_envvar'" ;;
+ esac
+ eval $ac_envvar=\$ac_optarg
export $ac_envvar ;;
*)
# FIXME: should be removed in autoconf 3.0.
- echo "$as_me: WARNING: you should use --build, --host, --target" >&2
+ $as_echo "$as_me: WARNING: you should use --build, --host, --target" >&2
expr "x$ac_option" : ".*[^-._$as_cr_alnum]" >/dev/null &&
- echo "$as_me: WARNING: invalid host type: $ac_option" >&2
- : ${build_alias=$ac_option} ${host_alias=$ac_option} ${target_alias=$ac_option}
+ $as_echo "$as_me: WARNING: invalid host type: $ac_option" >&2
+ : "${build_alias=$ac_option} ${host_alias=$ac_option} ${target_alias=$ac_option}"
;;
esac
@@ -653,31 +1176,36 @@ done
if test -n "$ac_prev"; then
ac_option=--`echo $ac_prev | sed 's/_/-/g'`
- { echo "$as_me: error: missing argument to $ac_option" >&2
- { (exit 1); exit 1; }; }
+ as_fn_error $? "missing argument to $ac_option"
fi
-# Be sure to have absolute paths.
-for ac_var in exec_prefix prefix
-do
- eval ac_val=$`echo $ac_var`
- case $ac_val in
- [\\/$]* | ?:[\\/]* | NONE | '' ) ;;
- *) { echo "$as_me: error: expected an absolute directory name for --$ac_var: $ac_val" >&2
- { (exit 1); exit 1; }; };;
+if test -n "$ac_unrecognized_opts"; then
+ case $enable_option_checking in
+ no) ;;
+ fatal) as_fn_error $? "unrecognized options: $ac_unrecognized_opts" ;;
+ *) $as_echo "$as_me: WARNING: unrecognized options: $ac_unrecognized_opts" >&2 ;;
esac
-done
+fi
-# Be sure to have absolute paths.
-for ac_var in bindir sbindir libexecdir datadir sysconfdir sharedstatedir \
- localstatedir libdir includedir oldincludedir infodir mandir
+# Check all directory arguments for consistency.
+for ac_var in exec_prefix prefix bindir sbindir libexecdir datarootdir \
+ datadir sysconfdir sharedstatedir localstatedir includedir \
+ oldincludedir docdir infodir htmldir dvidir pdfdir psdir \
+ libdir localedir mandir
do
- eval ac_val=$`echo $ac_var`
+ eval ac_val=\$$ac_var
+ # Remove trailing slashes.
case $ac_val in
- [\\/$]* | ?:[\\/]* ) ;;
- *) { echo "$as_me: error: expected an absolute directory name for --$ac_var: $ac_val" >&2
- { (exit 1); exit 1; }; };;
+ */ )
+ ac_val=`expr "X$ac_val" : 'X\(.*[^/]\)' \| "X$ac_val" : 'X\(.*\)'`
+ eval $ac_var=\$ac_val;;
esac
+ # Be sure to have absolute directory names.
+ case $ac_val in
+ [\\/$]* | ?:[\\/]* ) continue;;
+ NONE | '' ) case $ac_var in *prefix ) continue;; esac;;
+ esac
+ as_fn_error $? "expected an absolute directory name for --$ac_var: $ac_val"
done
# There might be people who depend on the old broken behavior: `$host'
@@ -691,8 +1219,6 @@ target=$target_alias
if test "x$host_alias" != x; then
if test "x$build_alias" = x; then
cross_compiling=maybe
- echo "$as_me: WARNING: If you wanted to set the --build type, don't use --host.
- If a cross compiler is detected then cross compile mode will be used." >&2
elif test "x$build_alias" != "x$host_alias"; then
cross_compiling=yes
fi
@@ -704,86 +1230,72 @@ test -n "$host_alias" && ac_tool_prefix=$host_alias-
test "$silent" = yes && exec 6>/dev/null
+ac_pwd=`pwd` && test -n "$ac_pwd" &&
+ac_ls_di=`ls -di .` &&
+ac_pwd_ls_di=`cd "$ac_pwd" && ls -di .` ||
+ as_fn_error $? "working directory cannot be determined"
+test "X$ac_ls_di" = "X$ac_pwd_ls_di" ||
+ as_fn_error $? "pwd does not report name of working directory"
+
+
# Find the source files, if location was not specified.
if test -z "$srcdir"; then
ac_srcdir_defaulted=yes
- # Try the directory containing this script, then its parent.
- ac_confdir=`(dirname "$0") 2>/dev/null ||
-$as_expr X"$0" : 'X\(.*[^/]\)//*[^/][^/]*/*$' \| \
- X"$0" : 'X\(//\)[^/]' \| \
- X"$0" : 'X\(//\)$' \| \
- X"$0" : 'X\(/\)' \| \
- . : '\(.\)' 2>/dev/null ||
-echo X"$0" |
- sed '/^X\(.*[^/]\)\/\/*[^/][^/]*\/*$/{ s//\1/; q; }
- /^X\(\/\/\)[^/].*/{ s//\1/; q; }
- /^X\(\/\/\)$/{ s//\1/; q; }
- /^X\(\/\).*/{ s//\1/; q; }
- s/.*/./; q'`
+ # Try the directory containing this script, then the parent directory.
+ ac_confdir=`$as_dirname -- "$as_myself" ||
+$as_expr X"$as_myself" : 'X\(.*[^/]\)//*[^/][^/]*/*$' \| \
+ X"$as_myself" : 'X\(//\)[^/]' \| \
+ X"$as_myself" : 'X\(//\)$' \| \
+ X"$as_myself" : 'X\(/\)' \| . 2>/dev/null ||
+$as_echo X"$as_myself" |
+ sed '/^X\(.*[^/]\)\/\/*[^/][^/]*\/*$/{
+ s//\1/
+ q
+ }
+ /^X\(\/\/\)[^/].*/{
+ s//\1/
+ q
+ }
+ /^X\(\/\/\)$/{
+ s//\1/
+ q
+ }
+ /^X\(\/\).*/{
+ s//\1/
+ q
+ }
+ s/.*/./; q'`
srcdir=$ac_confdir
- if test ! -r $srcdir/$ac_unique_file; then
+ if test ! -r "$srcdir/$ac_unique_file"; then
srcdir=..
fi
else
ac_srcdir_defaulted=no
fi
-if test ! -r $srcdir/$ac_unique_file; then
- if test "$ac_srcdir_defaulted" = yes; then
- { echo "$as_me: error: cannot find sources ($ac_unique_file) in $ac_confdir or .." >&2
- { (exit 1); exit 1; }; }
- else
- { echo "$as_me: error: cannot find sources ($ac_unique_file) in $srcdir" >&2
- { (exit 1); exit 1; }; }
- fi
-fi
-(cd $srcdir && test -r ./$ac_unique_file) 2>/dev/null ||
- { echo "$as_me: error: sources are in $srcdir, but \`cd $srcdir' does not work" >&2
- { (exit 1); exit 1; }; }
-srcdir=`echo "$srcdir" | sed 's%\([^\\/]\)[\\/]*$%\1%'`
-ac_env_build_alias_set=${build_alias+set}
-ac_env_build_alias_value=$build_alias
-ac_cv_env_build_alias_set=${build_alias+set}
-ac_cv_env_build_alias_value=$build_alias
-ac_env_host_alias_set=${host_alias+set}
-ac_env_host_alias_value=$host_alias
-ac_cv_env_host_alias_set=${host_alias+set}
-ac_cv_env_host_alias_value=$host_alias
-ac_env_target_alias_set=${target_alias+set}
-ac_env_target_alias_value=$target_alias
-ac_cv_env_target_alias_set=${target_alias+set}
-ac_cv_env_target_alias_value=$target_alias
-ac_env_PYTHON_set=${PYTHON+set}
-ac_env_PYTHON_value=$PYTHON
-ac_cv_env_PYTHON_set=${PYTHON+set}
-ac_cv_env_PYTHON_value=$PYTHON
-ac_env_CXX_set=${CXX+set}
-ac_env_CXX_value=$CXX
-ac_cv_env_CXX_set=${CXX+set}
-ac_cv_env_CXX_value=$CXX
-ac_env_CXXFLAGS_set=${CXXFLAGS+set}
-ac_env_CXXFLAGS_value=$CXXFLAGS
-ac_cv_env_CXXFLAGS_set=${CXXFLAGS+set}
-ac_cv_env_CXXFLAGS_value=$CXXFLAGS
-ac_env_LDFLAGS_set=${LDFLAGS+set}
-ac_env_LDFLAGS_value=$LDFLAGS
-ac_cv_env_LDFLAGS_set=${LDFLAGS+set}
-ac_cv_env_LDFLAGS_value=$LDFLAGS
-ac_env_CPPFLAGS_set=${CPPFLAGS+set}
-ac_env_CPPFLAGS_value=$CPPFLAGS
-ac_cv_env_CPPFLAGS_set=${CPPFLAGS+set}
-ac_cv_env_CPPFLAGS_value=$CPPFLAGS
-ac_env_CC_set=${CC+set}
-ac_env_CC_value=$CC
-ac_cv_env_CC_set=${CC+set}
-ac_cv_env_CC_value=$CC
-ac_env_CFLAGS_set=${CFLAGS+set}
-ac_env_CFLAGS_value=$CFLAGS
-ac_cv_env_CFLAGS_set=${CFLAGS+set}
-ac_cv_env_CFLAGS_value=$CFLAGS
-ac_env_CXXCPP_set=${CXXCPP+set}
-ac_env_CXXCPP_value=$CXXCPP
-ac_cv_env_CXXCPP_set=${CXXCPP+set}
-ac_cv_env_CXXCPP_value=$CXXCPP
+if test ! -r "$srcdir/$ac_unique_file"; then
+ test "$ac_srcdir_defaulted" = yes && srcdir="$ac_confdir or .."
+ as_fn_error $? "cannot find sources ($ac_unique_file) in $srcdir"
+fi
+ac_msg="sources are in $srcdir, but \`cd $srcdir' does not work"
+ac_abs_confdir=`(
+ cd "$srcdir" && test -r "./$ac_unique_file" || as_fn_error $? "$ac_msg"
+ pwd)`
+# When building in place, set srcdir=.
+if test "$ac_abs_confdir" = "$ac_pwd"; then
+ srcdir=.
+fi
+# Remove unnecessary trailing slashes from srcdir.
+# Double slashes in file names in object file debugging info
+# mess up M-x gdb in Emacs.
+case $srcdir in
+*/) srcdir=`expr "X$srcdir" : 'X\(.*[^/]\)' \| "X$srcdir" : 'X\(.*\)'`;;
+esac
+for ac_var in $ac_precious_vars; do
+ eval ac_env_${ac_var}_set=\${${ac_var}+set}
+ eval ac_env_${ac_var}_value=\$${ac_var}
+ eval ac_cv_env_${ac_var}_set=\${${ac_var}+set}
+ eval ac_cv_env_${ac_var}_value=\$${ac_var}
+done
#
# Report the --help message.
@@ -792,7 +1304,7 @@ if test "$ac_init_help" = "long"; then
# Omit some internal or obsolete options to make the list less imposing.
# This message is too long to be a string in the A/UX 3.1 sh.
cat <<_ACEOF
-\`configure' configures tophat 2.0.13 to adapt to many kinds of systems.
+\`configure' configures tophat 2.0.14 to adapt to many kinds of systems.
Usage: $0 [OPTION]... [VAR=VALUE]...
@@ -806,20 +1318,17 @@ Configuration:
--help=short display options specific to this package
--help=recursive display the short help of all the included packages
-V, --version display version information and exit
- -q, --quiet, --silent do not print \`checking...' messages
+ -q, --quiet, --silent do not print \`checking ...' messages
--cache-file=FILE cache test results in FILE [disabled]
-C, --config-cache alias for \`--cache-file=config.cache'
-n, --no-create do not create output files
--srcdir=DIR find the sources in DIR [configure dir or \`..']
-_ACEOF
-
- cat <<_ACEOF
Installation directories:
--prefix=PREFIX install architecture-independent files in PREFIX
- [$ac_default_prefix]
+ [$ac_default_prefix]
--exec-prefix=EPREFIX install architecture-dependent files in EPREFIX
- [PREFIX]
+ [PREFIX]
By default, \`make install' will install all the files in
\`$ac_default_prefix/bin', \`$ac_default_prefix/lib' etc. You can specify
@@ -829,18 +1338,25 @@ for instance \`--prefix=\$HOME'.
For better control, use the options below.
Fine tuning of the installation directories:
- --bindir=DIR user executables [EPREFIX/bin]
- --sbindir=DIR system admin executables [EPREFIX/sbin]
- --libexecdir=DIR program executables [EPREFIX/libexec]
- --datadir=DIR read-only architecture-independent data [PREFIX/share]
- --sysconfdir=DIR read-only single-machine data [PREFIX/etc]
- --sharedstatedir=DIR modifiable architecture-independent data [PREFIX/com]
- --localstatedir=DIR modifiable single-machine data [PREFIX/var]
- --libdir=DIR object code libraries [EPREFIX/lib]
- --includedir=DIR C header files [PREFIX/include]
- --oldincludedir=DIR C header files for non-gcc [/usr/include]
- --infodir=DIR info documentation [PREFIX/info]
- --mandir=DIR man documentation [PREFIX/man]
+ --bindir=DIR user executables [EPREFIX/bin]
+ --sbindir=DIR system admin executables [EPREFIX/sbin]
+ --libexecdir=DIR program executables [EPREFIX/libexec]
+ --sysconfdir=DIR read-only single-machine data [PREFIX/etc]
+ --sharedstatedir=DIR modifiable architecture-independent data [PREFIX/com]
+ --localstatedir=DIR modifiable single-machine data [PREFIX/var]
+ --libdir=DIR object code libraries [EPREFIX/lib]
+ --includedir=DIR C header files [PREFIX/include]
+ --oldincludedir=DIR C header files for non-gcc [/usr/include]
+ --datarootdir=DIR read-only arch.-independent data root [PREFIX/share]
+ --datadir=DIR read-only architecture-independent data [DATAROOTDIR]
+ --infodir=DIR info documentation [DATAROOTDIR/info]
+ --localedir=DIR locale-dependent data [DATAROOTDIR/locale]
+ --mandir=DIR man documentation [DATAROOTDIR/man]
+ --docdir=DIR documentation root [DATAROOTDIR/doc/tophat]
+ --htmldir=DIR html documentation [DOCDIR]
+ --dvidir=DIR dvi documentation [DOCDIR]
+ --pdfdir=DIR pdf documentation [DOCDIR]
+ --psdir=DIR ps documentation [DOCDIR]
_ACEOF
cat <<\_ACEOF
@@ -858,15 +1374,18 @@ fi
if test -n "$ac_init_help"; then
case $ac_init_help in
- short | recursive ) echo "Configuration of tophat 2.0.13:";;
+ short | recursive ) echo "Configuration of tophat 2.0.14:";;
esac
cat <<\_ACEOF
Optional Features:
+ --disable-option-checking ignore unrecognized --enable/--with options
--disable-FEATURE do not include FEATURE (same as --enable-FEATURE=no)
--enable-FEATURE[=ARG] include FEATURE [ARG=yes]
- --disable-dependency-tracking speeds up one-time build
- --enable-dependency-tracking do not reject slow dependency extractors
+ --enable-dependency-tracking
+ do not reject slow dependency extractors
+ --disable-dependency-tracking
+ speeds up one-time build
--disable-largefile omit support for large files
--enable-intel64 optimize for Intel64 CPU such as Xeon and Core2
--enable-debug enable debugging info (default is no)
@@ -876,8 +1395,7 @@ Optional Features:
Optional Packages:
--with-PACKAGE[=ARG] use PACKAGE [ARG=yes]
--without-PACKAGE do not use PACKAGE (same as --with-PACKAGE=no)
- --with-boost[=DIR]
- use boost (default is yes) - it is possible to
+ --with-boost[=DIR] use boost (default is yes) - it is possible to
specify the root directory for boost (optional)
--with-boost-libdir=LIB_DIR
Force given directory for boost libraries. Note that
@@ -893,8 +1411,9 @@ Some influential environment variables:
CXXFLAGS C++ compiler flags
LDFLAGS linker flags, e.g. -L<lib dir> if you have libraries in a
nonstandard directory <lib dir>
- CPPFLAGS C/C++ preprocessor flags, e.g. -I<include dir> if you have
- headers in a nonstandard directory <include dir>
+ LIBS libraries to pass to the linker, e.g. -l<library>
+ CPPFLAGS (Objective) C/C++ preprocessor flags, e.g. -I<include dir> if
+ you have headers in a nonstandard directory <include dir>
CC C compiler command
CFLAGS C compiler flags
CXXCPP C++ preprocessor
@@ -904,156 +1423,572 @@ it to find libraries and programs with nonstandard names/locations.
Report bugs to <tophat.cufflinks at gmail.com>.
_ACEOF
+ac_status=$?
fi
if test "$ac_init_help" = "recursive"; then
# If there are subdirs, report their specific --help.
- ac_popdir=`pwd`
for ac_dir in : $ac_subdirs_all; do test "x$ac_dir" = x: && continue
- test -d $ac_dir || continue
+ test -d "$ac_dir" ||
+ { cd "$srcdir" && ac_pwd=`pwd` && srcdir=. && test -d "$ac_dir"; } ||
+ continue
ac_builddir=.
-if test "$ac_dir" != .; then
- ac_dir_suffix=/`echo "$ac_dir" | sed 's,^\.[\\/],,'`
- # A "../" for each directory in $ac_dir_suffix.
- ac_top_builddir=`echo "$ac_dir_suffix" | sed 's,/[^\\/]*,../,g'`
-else
- ac_dir_suffix= ac_top_builddir=
-fi
+case "$ac_dir" in
+.) ac_dir_suffix= ac_top_builddir_sub=. ac_top_build_prefix= ;;
+*)
+ ac_dir_suffix=/`$as_echo "$ac_dir" | sed 's|^\.[\\/]||'`
+ # A ".." for each directory in $ac_dir_suffix.
+ ac_top_builddir_sub=`$as_echo "$ac_dir_suffix" | sed 's|/[^\\/]*|/..|g;s|/||'`
+ case $ac_top_builddir_sub in
+ "") ac_top_builddir_sub=. ac_top_build_prefix= ;;
+ *) ac_top_build_prefix=$ac_top_builddir_sub/ ;;
+ esac ;;
+esac
+ac_abs_top_builddir=$ac_pwd
+ac_abs_builddir=$ac_pwd$ac_dir_suffix
+# for backward compatibility:
+ac_top_builddir=$ac_top_build_prefix
case $srcdir in
- .) # No --srcdir option. We are building in place.
+ .) # We are building in place.
ac_srcdir=.
- if test -z "$ac_top_builddir"; then
- ac_top_srcdir=.
- else
- ac_top_srcdir=`echo $ac_top_builddir | sed 's,/$,,'`
- fi ;;
- [\\/]* | ?:[\\/]* ) # Absolute path.
+ ac_top_srcdir=$ac_top_builddir_sub
+ ac_abs_top_srcdir=$ac_pwd ;;
+ [\\/]* | ?:[\\/]* ) # Absolute name.
ac_srcdir=$srcdir$ac_dir_suffix;
- ac_top_srcdir=$srcdir ;;
- *) # Relative path.
- ac_srcdir=$ac_top_builddir$srcdir$ac_dir_suffix
- ac_top_srcdir=$ac_top_builddir$srcdir ;;
-esac
-
-# Do not use `cd foo && pwd` to compute absolute paths, because
-# the directories may not exist.
-case `pwd` in
-.) ac_abs_builddir="$ac_dir";;
-*)
- case "$ac_dir" in
- .) ac_abs_builddir=`pwd`;;
- [\\/]* | ?:[\\/]* ) ac_abs_builddir="$ac_dir";;
- *) ac_abs_builddir=`pwd`/"$ac_dir";;
- esac;;
+ ac_top_srcdir=$srcdir
+ ac_abs_top_srcdir=$srcdir ;;
+ *) # Relative name.
+ ac_srcdir=$ac_top_build_prefix$srcdir$ac_dir_suffix
+ ac_top_srcdir=$ac_top_build_prefix$srcdir
+ ac_abs_top_srcdir=$ac_pwd/$srcdir ;;
esac
-case $ac_abs_builddir in
-.) ac_abs_top_builddir=${ac_top_builddir}.;;
-*)
- case ${ac_top_builddir}. in
- .) ac_abs_top_builddir=$ac_abs_builddir;;
- [\\/]* | ?:[\\/]* ) ac_abs_top_builddir=${ac_top_builddir}.;;
- *) ac_abs_top_builddir=$ac_abs_builddir/${ac_top_builddir}.;;
- esac;;
-esac
-case $ac_abs_builddir in
-.) ac_abs_srcdir=$ac_srcdir;;
-*)
- case $ac_srcdir in
- .) ac_abs_srcdir=$ac_abs_builddir;;
- [\\/]* | ?:[\\/]* ) ac_abs_srcdir=$ac_srcdir;;
- *) ac_abs_srcdir=$ac_abs_builddir/$ac_srcdir;;
- esac;;
-esac
-case $ac_abs_builddir in
-.) ac_abs_top_srcdir=$ac_top_srcdir;;
-*)
- case $ac_top_srcdir in
- .) ac_abs_top_srcdir=$ac_abs_builddir;;
- [\\/]* | ?:[\\/]* ) ac_abs_top_srcdir=$ac_top_srcdir;;
- *) ac_abs_top_srcdir=$ac_abs_builddir/$ac_top_srcdir;;
- esac;;
-esac
-
- cd $ac_dir
- # Check for guested configure; otherwise get Cygnus style configure.
- if test -f $ac_srcdir/configure.gnu; then
- echo
- $SHELL $ac_srcdir/configure.gnu --help=recursive
- elif test -f $ac_srcdir/configure; then
- echo
- $SHELL $ac_srcdir/configure --help=recursive
- elif test -f $ac_srcdir/configure.ac ||
- test -f $ac_srcdir/configure.in; then
- echo
- $ac_configure --help
+ac_abs_srcdir=$ac_abs_top_srcdir$ac_dir_suffix
+
+ cd "$ac_dir" || { ac_status=$?; continue; }
+ # Check for guested configure.
+ if test -f "$ac_srcdir/configure.gnu"; then
+ echo &&
+ $SHELL "$ac_srcdir/configure.gnu" --help=recursive
+ elif test -f "$ac_srcdir/configure"; then
+ echo &&
+ $SHELL "$ac_srcdir/configure" --help=recursive
else
- echo "$as_me: WARNING: no configuration information is in $ac_dir" >&2
- fi
- cd $ac_popdir
+ $as_echo "$as_me: WARNING: no configuration information is in $ac_dir" >&2
+ fi || ac_status=$?
+ cd "$ac_pwd" || { ac_status=$?; break; }
done
fi
-test -n "$ac_init_help" && exit 0
+test -n "$ac_init_help" && exit $ac_status
if $ac_init_version; then
cat <<\_ACEOF
-tophat configure 2.0.13
-generated by GNU Autoconf 2.59
+tophat configure 2.0.14
+generated by GNU Autoconf 2.69
-Copyright (C) 2003 Free Software Foundation, Inc.
+Copyright (C) 2012 Free Software Foundation, Inc.
This configure script is free software; the Free Software Foundation
gives unlimited permission to copy, distribute and modify it.
_ACEOF
- exit 0
+ exit
fi
-exec 5>config.log
-cat >&5 <<_ACEOF
-This file contains any messages produced by compilers while
-running configure, to aid debugging if configure makes a mistake.
-It was created by tophat $as_me 2.0.13, which was
-generated by GNU Autoconf 2.59. Invocation command line was
-
- $ $0 $@
+## ------------------------ ##
+## Autoconf initialization. ##
+## ------------------------ ##
-_ACEOF
+# ac_fn_cxx_try_compile LINENO
+# ----------------------------
+# Try to compile conftest.$ac_ext, and return whether this succeeded.
+ac_fn_cxx_try_compile ()
{
-cat <<_ASUNAME
-## --------- ##
-## Platform. ##
-## --------- ##
-
-hostname = `(hostname || uname -n) 2>/dev/null | sed 1q`
-uname -m = `(uname -m) 2>/dev/null || echo unknown`
-uname -r = `(uname -r) 2>/dev/null || echo unknown`
-uname -s = `(uname -s) 2>/dev/null || echo unknown`
-uname -v = `(uname -v) 2>/dev/null || echo unknown`
-
-/usr/bin/uname -p = `(/usr/bin/uname -p) 2>/dev/null || echo unknown`
-/bin/uname -X = `(/bin/uname -X) 2>/dev/null || echo unknown`
+ as_lineno=${as_lineno-"$1"} as_lineno_stack=as_lineno_stack=$as_lineno_stack
+ rm -f conftest.$ac_objext
+ if { { ac_try="$ac_compile"
+case "(($ac_try" in
+ *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
+ *) ac_try_echo=$ac_try;;
+esac
+eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\""
+$as_echo "$ac_try_echo"; } >&5
+ (eval "$ac_compile") 2>conftest.err
+ ac_status=$?
+ if test -s conftest.err; then
+ grep -v '^ *+' conftest.err >conftest.er1
+ cat conftest.er1 >&5
+ mv -f conftest.er1 conftest.err
+ fi
+ $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
+ test $ac_status = 0; } && {
+ test -z "$ac_cxx_werror_flag" ||
+ test ! -s conftest.err
+ } && test -s conftest.$ac_objext; then :
+ ac_retval=0
+else
+ $as_echo "$as_me: failed program was:" >&5
+sed 's/^/| /' conftest.$ac_ext >&5
-/bin/arch = `(/bin/arch) 2>/dev/null || echo unknown`
-/usr/bin/arch -k = `(/usr/bin/arch -k) 2>/dev/null || echo unknown`
-/usr/convex/getsysinfo = `(/usr/convex/getsysinfo) 2>/dev/null || echo unknown`
-hostinfo = `(hostinfo) 2>/dev/null || echo unknown`
-/bin/machine = `(/bin/machine) 2>/dev/null || echo unknown`
-/usr/bin/oslevel = `(/usr/bin/oslevel) 2>/dev/null || echo unknown`
-/bin/universe = `(/bin/universe) 2>/dev/null || echo unknown`
+ ac_retval=1
+fi
+ eval $as_lineno_stack; ${as_lineno_stack:+:} unset as_lineno
+ as_fn_set_status $ac_retval
-_ASUNAME
+} # ac_fn_cxx_try_compile
-as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
-for as_dir in $PATH
-do
- IFS=$as_save_IFS
- test -z "$as_dir" && as_dir=.
- echo "PATH: $as_dir"
-done
+# ac_fn_c_try_compile LINENO
+# --------------------------
+# Try to compile conftest.$ac_ext, and return whether this succeeded.
+ac_fn_c_try_compile ()
+{
+ as_lineno=${as_lineno-"$1"} as_lineno_stack=as_lineno_stack=$as_lineno_stack
+ rm -f conftest.$ac_objext
+ if { { ac_try="$ac_compile"
+case "(($ac_try" in
+ *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
+ *) ac_try_echo=$ac_try;;
+esac
+eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\""
+$as_echo "$ac_try_echo"; } >&5
+ (eval "$ac_compile") 2>conftest.err
+ ac_status=$?
+ if test -s conftest.err; then
+ grep -v '^ *+' conftest.err >conftest.er1
+ cat conftest.er1 >&5
+ mv -f conftest.er1 conftest.err
+ fi
+ $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
+ test $ac_status = 0; } && {
+ test -z "$ac_c_werror_flag" ||
+ test ! -s conftest.err
+ } && test -s conftest.$ac_objext; then :
+ ac_retval=0
+else
+ $as_echo "$as_me: failed program was:" >&5
+sed 's/^/| /' conftest.$ac_ext >&5
-} >&5
+ ac_retval=1
+fi
+ eval $as_lineno_stack; ${as_lineno_stack:+:} unset as_lineno
+ as_fn_set_status $ac_retval
-cat >&5 <<_ACEOF
+} # ac_fn_c_try_compile
+
+# ac_fn_cxx_try_link LINENO
+# -------------------------
+# Try to link conftest.$ac_ext, and return whether this succeeded.
+ac_fn_cxx_try_link ()
+{
+ as_lineno=${as_lineno-"$1"} as_lineno_stack=as_lineno_stack=$as_lineno_stack
+ rm -f conftest.$ac_objext conftest$ac_exeext
+ if { { ac_try="$ac_link"
+case "(($ac_try" in
+ *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
+ *) ac_try_echo=$ac_try;;
+esac
+eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\""
+$as_echo "$ac_try_echo"; } >&5
+ (eval "$ac_link") 2>conftest.err
+ ac_status=$?
+ if test -s conftest.err; then
+ grep -v '^ *+' conftest.err >conftest.er1
+ cat conftest.er1 >&5
+ mv -f conftest.er1 conftest.err
+ fi
+ $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
+ test $ac_status = 0; } && {
+ test -z "$ac_cxx_werror_flag" ||
+ test ! -s conftest.err
+ } && test -s conftest$ac_exeext && {
+ test "$cross_compiling" = yes ||
+ test -x conftest$ac_exeext
+ }; then :
+ ac_retval=0
+else
+ $as_echo "$as_me: failed program was:" >&5
+sed 's/^/| /' conftest.$ac_ext >&5
+
+ ac_retval=1
+fi
+ # Delete the IPA/IPO (Inter Procedural Analysis/Optimization) information
+ # created by the PGI compiler (conftest_ipa8_conftest.oo), as it would
+ # interfere with the next link command; also delete a directory that is
+ # left behind by Apple's compiler. We do this before executing the actions.
+ rm -rf conftest.dSYM conftest_ipa8_conftest.oo
+ eval $as_lineno_stack; ${as_lineno_stack:+:} unset as_lineno
+ as_fn_set_status $ac_retval
+
+} # ac_fn_cxx_try_link
+
+# ac_fn_cxx_try_cpp LINENO
+# ------------------------
+# Try to preprocess conftest.$ac_ext, and return whether this succeeded.
+ac_fn_cxx_try_cpp ()
+{
+ as_lineno=${as_lineno-"$1"} as_lineno_stack=as_lineno_stack=$as_lineno_stack
+ if { { ac_try="$ac_cpp conftest.$ac_ext"
+case "(($ac_try" in
+ *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
+ *) ac_try_echo=$ac_try;;
+esac
+eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\""
+$as_echo "$ac_try_echo"; } >&5
+ (eval "$ac_cpp conftest.$ac_ext") 2>conftest.err
+ ac_status=$?
+ if test -s conftest.err; then
+ grep -v '^ *+' conftest.err >conftest.er1
+ cat conftest.er1 >&5
+ mv -f conftest.er1 conftest.err
+ fi
+ $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
+ test $ac_status = 0; } > conftest.i && {
+ test -z "$ac_cxx_preproc_warn_flag$ac_cxx_werror_flag" ||
+ test ! -s conftest.err
+ }; then :
+ ac_retval=0
+else
+ $as_echo "$as_me: failed program was:" >&5
+sed 's/^/| /' conftest.$ac_ext >&5
+
+ ac_retval=1
+fi
+ eval $as_lineno_stack; ${as_lineno_stack:+:} unset as_lineno
+ as_fn_set_status $ac_retval
+
+} # ac_fn_cxx_try_cpp
+
+# ac_fn_cxx_check_header_mongrel LINENO HEADER VAR INCLUDES
+# ---------------------------------------------------------
+# Tests whether HEADER exists, giving a warning if it cannot be compiled using
+# the include files in INCLUDES and setting the cache variable VAR
+# accordingly.
+ac_fn_cxx_check_header_mongrel ()
+{
+ as_lineno=${as_lineno-"$1"} as_lineno_stack=as_lineno_stack=$as_lineno_stack
+ if eval \${$3+:} false; then :
+ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for $2" >&5
+$as_echo_n "checking for $2... " >&6; }
+if eval \${$3+:} false; then :
+ $as_echo_n "(cached) " >&6
+fi
+eval ac_res=\$$3
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_res" >&5
+$as_echo "$ac_res" >&6; }
+else
+ # Is the header compilable?
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking $2 usability" >&5
+$as_echo_n "checking $2 usability... " >&6; }
+cat confdefs.h - <<_ACEOF >conftest.$ac_ext
+/* end confdefs.h. */
+$4
+#include <$2>
+_ACEOF
+if ac_fn_cxx_try_compile "$LINENO"; then :
+ ac_header_compiler=yes
+else
+ ac_header_compiler=no
+fi
+rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_header_compiler" >&5
+$as_echo "$ac_header_compiler" >&6; }
+
+# Is the header present?
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking $2 presence" >&5
+$as_echo_n "checking $2 presence... " >&6; }
+cat confdefs.h - <<_ACEOF >conftest.$ac_ext
+/* end confdefs.h. */
+#include <$2>
+_ACEOF
+if ac_fn_cxx_try_cpp "$LINENO"; then :
+ ac_header_preproc=yes
+else
+ ac_header_preproc=no
+fi
+rm -f conftest.err conftest.i conftest.$ac_ext
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_header_preproc" >&5
+$as_echo "$ac_header_preproc" >&6; }
+
+# So? What about this header?
+case $ac_header_compiler:$ac_header_preproc:$ac_cxx_preproc_warn_flag in #((
+ yes:no: )
+ { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: $2: accepted by the compiler, rejected by the preprocessor!" >&5
+$as_echo "$as_me: WARNING: $2: accepted by the compiler, rejected by the preprocessor!" >&2;}
+ { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: $2: proceeding with the compiler's result" >&5
+$as_echo "$as_me: WARNING: $2: proceeding with the compiler's result" >&2;}
+ ;;
+ no:yes:* )
+ { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: $2: present but cannot be compiled" >&5
+$as_echo "$as_me: WARNING: $2: present but cannot be compiled" >&2;}
+ { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: $2: check for missing prerequisite headers?" >&5
+$as_echo "$as_me: WARNING: $2: check for missing prerequisite headers?" >&2;}
+ { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: $2: see the Autoconf documentation" >&5
+$as_echo "$as_me: WARNING: $2: see the Autoconf documentation" >&2;}
+ { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: $2: section \"Present But Cannot Be Compiled\"" >&5
+$as_echo "$as_me: WARNING: $2: section \"Present But Cannot Be Compiled\"" >&2;}
+ { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: $2: proceeding with the compiler's result" >&5
+$as_echo "$as_me: WARNING: $2: proceeding with the compiler's result" >&2;}
+( $as_echo "## ----------------------------------------- ##
+## Report this to tophat.cufflinks at gmail.com ##
+## ----------------------------------------- ##"
+ ) | sed "s/^/$as_me: WARNING: /" >&2
+ ;;
+esac
+ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for $2" >&5
+$as_echo_n "checking for $2... " >&6; }
+if eval \${$3+:} false; then :
+ $as_echo_n "(cached) " >&6
+else
+ eval "$3=\$ac_header_compiler"
+fi
+eval ac_res=\$$3
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_res" >&5
+$as_echo "$ac_res" >&6; }
+fi
+ eval $as_lineno_stack; ${as_lineno_stack:+:} unset as_lineno
+
+} # ac_fn_cxx_check_header_mongrel
+
+# ac_fn_cxx_try_run LINENO
+# ------------------------
+# Try to link conftest.$ac_ext, and return whether this succeeded. Assumes
+# that executables *can* be run.
+ac_fn_cxx_try_run ()
+{
+ as_lineno=${as_lineno-"$1"} as_lineno_stack=as_lineno_stack=$as_lineno_stack
+ if { { ac_try="$ac_link"
+case "(($ac_try" in
+ *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
+ *) ac_try_echo=$ac_try;;
+esac
+eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\""
+$as_echo "$ac_try_echo"; } >&5
+ (eval "$ac_link") 2>&5
+ ac_status=$?
+ $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
+ test $ac_status = 0; } && { ac_try='./conftest$ac_exeext'
+ { { case "(($ac_try" in
+ *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
+ *) ac_try_echo=$ac_try;;
+esac
+eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\""
+$as_echo "$ac_try_echo"; } >&5
+ (eval "$ac_try") 2>&5
+ ac_status=$?
+ $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
+ test $ac_status = 0; }; }; then :
+ ac_retval=0
+else
+ $as_echo "$as_me: program exited with status $ac_status" >&5
+ $as_echo "$as_me: failed program was:" >&5
+sed 's/^/| /' conftest.$ac_ext >&5
+
+ ac_retval=$ac_status
+fi
+ rm -rf conftest.dSYM conftest_ipa8_conftest.oo
+ eval $as_lineno_stack; ${as_lineno_stack:+:} unset as_lineno
+ as_fn_set_status $ac_retval
+
+} # ac_fn_cxx_try_run
+
+# ac_fn_cxx_check_header_compile LINENO HEADER VAR INCLUDES
+# ---------------------------------------------------------
+# Tests whether HEADER exists and can be compiled using the include files in
+# INCLUDES, setting the cache variable VAR accordingly.
+ac_fn_cxx_check_header_compile ()
+{
+ as_lineno=${as_lineno-"$1"} as_lineno_stack=as_lineno_stack=$as_lineno_stack
+ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for $2" >&5
+$as_echo_n "checking for $2... " >&6; }
+if eval \${$3+:} false; then :
+ $as_echo_n "(cached) " >&6
+else
+ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
+/* end confdefs.h. */
+$4
+#include <$2>
+_ACEOF
+if ac_fn_cxx_try_compile "$LINENO"; then :
+ eval "$3=yes"
+else
+ eval "$3=no"
+fi
+rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
+fi
+eval ac_res=\$$3
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_res" >&5
+$as_echo "$ac_res" >&6; }
+ eval $as_lineno_stack; ${as_lineno_stack:+:} unset as_lineno
+
+} # ac_fn_cxx_check_header_compile
+
+# ac_fn_cxx_check_type LINENO TYPE VAR INCLUDES
+# ---------------------------------------------
+# Tests whether TYPE exists after having included INCLUDES, setting cache
+# variable VAR accordingly.
+ac_fn_cxx_check_type ()
+{
+ as_lineno=${as_lineno-"$1"} as_lineno_stack=as_lineno_stack=$as_lineno_stack
+ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for $2" >&5
+$as_echo_n "checking for $2... " >&6; }
+if eval \${$3+:} false; then :
+ $as_echo_n "(cached) " >&6
+else
+ eval "$3=no"
+ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
+/* end confdefs.h. */
+$4
+int
+main ()
+{
+if (sizeof ($2))
+ return 0;
+ ;
+ return 0;
+}
+_ACEOF
+if ac_fn_cxx_try_compile "$LINENO"; then :
+ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
+/* end confdefs.h. */
+$4
+int
+main ()
+{
+if (sizeof (($2)))
+ return 0;
+ ;
+ return 0;
+}
+_ACEOF
+if ac_fn_cxx_try_compile "$LINENO"; then :
+
+else
+ eval "$3=yes"
+fi
+rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
+fi
+rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
+fi
+eval ac_res=\$$3
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_res" >&5
+$as_echo "$ac_res" >&6; }
+ eval $as_lineno_stack; ${as_lineno_stack:+:} unset as_lineno
+
+} # ac_fn_cxx_check_type
+
+# ac_fn_cxx_check_func LINENO FUNC VAR
+# ------------------------------------
+# Tests whether FUNC exists, setting the cache variable VAR accordingly
+ac_fn_cxx_check_func ()
+{
+ as_lineno=${as_lineno-"$1"} as_lineno_stack=as_lineno_stack=$as_lineno_stack
+ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for $2" >&5
+$as_echo_n "checking for $2... " >&6; }
+if eval \${$3+:} false; then :
+ $as_echo_n "(cached) " >&6
+else
+ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
+/* end confdefs.h. */
+/* Define $2 to an innocuous variant, in case <limits.h> declares $2.
+ For example, HP-UX 11i <limits.h> declares gettimeofday. */
+#define $2 innocuous_$2
+
+/* System header to define __stub macros and hopefully few prototypes,
+ which can conflict with char $2 (); below.
+ Prefer <limits.h> to <assert.h> if __STDC__ is defined, since
+ <limits.h> exists even on freestanding compilers. */
+
+#ifdef __STDC__
+# include <limits.h>
+#else
+# include <assert.h>
+#endif
+
+#undef $2
+
+/* Override any GCC internal prototype to avoid an error.
+ Use char because int might match the return type of a GCC
+ builtin and then its argument prototype would still apply. */
+#ifdef __cplusplus
+extern "C"
+#endif
+char $2 ();
+/* The GNU C library defines this for functions which it implements
+ to always fail with ENOSYS. Some functions are actually named
+ something starting with __ and the normal name is an alias. */
+#if defined __stub_$2 || defined __stub___$2
+choke me
+#endif
+
+int
+main ()
+{
+return $2 ();
+ ;
+ return 0;
+}
+_ACEOF
+if ac_fn_cxx_try_link "$LINENO"; then :
+ eval "$3=yes"
+else
+ eval "$3=no"
+fi
+rm -f core conftest.err conftest.$ac_objext \
+ conftest$ac_exeext conftest.$ac_ext
+fi
+eval ac_res=\$$3
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_res" >&5
+$as_echo "$ac_res" >&6; }
+ eval $as_lineno_stack; ${as_lineno_stack:+:} unset as_lineno
+
+} # ac_fn_cxx_check_func
+cat >config.log <<_ACEOF
+This file contains any messages produced by compilers while
+running configure, to aid debugging if configure makes a mistake.
+
+It was created by tophat $as_me 2.0.14, which was
+generated by GNU Autoconf 2.69. Invocation command line was
+
+ $ $0 $@
+
+_ACEOF
+exec 5>>config.log
+{
+cat <<_ASUNAME
+## --------- ##
+## Platform. ##
+## --------- ##
+
+hostname = `(hostname || uname -n) 2>/dev/null | sed 1q`
+uname -m = `(uname -m) 2>/dev/null || echo unknown`
+uname -r = `(uname -r) 2>/dev/null || echo unknown`
+uname -s = `(uname -s) 2>/dev/null || echo unknown`
+uname -v = `(uname -v) 2>/dev/null || echo unknown`
+
+/usr/bin/uname -p = `(/usr/bin/uname -p) 2>/dev/null || echo unknown`
+/bin/uname -X = `(/bin/uname -X) 2>/dev/null || echo unknown`
+
+/bin/arch = `(/bin/arch) 2>/dev/null || echo unknown`
+/usr/bin/arch -k = `(/usr/bin/arch -k) 2>/dev/null || echo unknown`
+/usr/convex/getsysinfo = `(/usr/convex/getsysinfo) 2>/dev/null || echo unknown`
+/usr/bin/hostinfo = `(/usr/bin/hostinfo) 2>/dev/null || echo unknown`
+/bin/machine = `(/bin/machine) 2>/dev/null || echo unknown`
+/usr/bin/oslevel = `(/usr/bin/oslevel) 2>/dev/null || echo unknown`
+/bin/universe = `(/bin/universe) 2>/dev/null || echo unknown`
+
+_ASUNAME
+
+as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
+for as_dir in $PATH
+do
+ IFS=$as_save_IFS
+ test -z "$as_dir" && as_dir=.
+ $as_echo "PATH: $as_dir"
+ done
+IFS=$as_save_IFS
+
+} >&5
+
+cat >&5 <<_ACEOF
## ----------- ##
@@ -1071,7 +2006,6 @@ _ACEOF
ac_configure_args=
ac_configure_args0=
ac_configure_args1=
-ac_sep=
ac_must_keep_next=false
for ac_pass in 1 2
do
@@ -1082,13 +2016,13 @@ do
-q | -quiet | --quiet | --quie | --qui | --qu | --q \
| -silent | --silent | --silen | --sile | --sil)
continue ;;
- *" "*|*" "*|*[\[\]\~\#\$\^\&\*\(\)\{\}\\\|\;\<\>\?\"\']*)
- ac_arg=`echo "$ac_arg" | sed "s/'/'\\\\\\\\''/g"` ;;
+ *\'*)
+ ac_arg=`$as_echo "$ac_arg" | sed "s/'/'\\\\\\\\''/g"` ;;
esac
case $ac_pass in
- 1) ac_configure_args0="$ac_configure_args0 '$ac_arg'" ;;
+ 1) as_fn_append ac_configure_args0 " '$ac_arg'" ;;
2)
- ac_configure_args1="$ac_configure_args1 '$ac_arg'"
+ as_fn_append ac_configure_args1 " '$ac_arg'"
if test $ac_must_keep_next = true; then
ac_must_keep_next=false # Got value, back to normal.
else
@@ -1104,104 +2038,115 @@ do
-* ) ac_must_keep_next=true ;;
esac
fi
- ac_configure_args="$ac_configure_args$ac_sep'$ac_arg'"
- # Get rid of the leading space.
- ac_sep=" "
+ as_fn_append ac_configure_args " '$ac_arg'"
;;
esac
done
done
-$as_unset ac_configure_args0 || test "${ac_configure_args0+set}" != set || { ac_configure_args0=; export ac_configure_args0; }
-$as_unset ac_configure_args1 || test "${ac_configure_args1+set}" != set || { ac_configure_args1=; export ac_configure_args1; }
+{ ac_configure_args0=; unset ac_configure_args0;}
+{ ac_configure_args1=; unset ac_configure_args1;}
# When interrupted or exit'd, cleanup temporary files, and complete
# config.log. We remove comments because anyway the quotes in there
# would cause problems or look ugly.
-# WARNING: Be sure not to use single quotes in there, as some shells,
-# such as our DU 5.0 friend, will then `close' the trap.
+# WARNING: Use '\'' to represent an apostrophe within the trap.
+# WARNING: Do not start the trap code with a newline, due to a FreeBSD 4.0 bug.
trap 'exit_status=$?
# Save into config.log some information that might help in debugging.
{
echo
- cat <<\_ASBOX
-## ---------------- ##
+ $as_echo "## ---------------- ##
## Cache variables. ##
-## ---------------- ##
-_ASBOX
+## ---------------- ##"
echo
# The following way of writing the cache mishandles newlines in values,
-{
+(
+ for ac_var in `(set) 2>&1 | sed -n '\''s/^\([a-zA-Z_][a-zA-Z0-9_]*\)=.*/\1/p'\''`; do
+ eval ac_val=\$$ac_var
+ case $ac_val in #(
+ *${as_nl}*)
+ case $ac_var in #(
+ *_cv_*) { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: cache variable $ac_var contains a newline" >&5
+$as_echo "$as_me: WARNING: cache variable $ac_var contains a newline" >&2;} ;;
+ esac
+ case $ac_var in #(
+ _ | IFS | as_nl) ;; #(
+ BASH_ARGV | BASH_SOURCE) eval $ac_var= ;; #(
+ *) { eval $ac_var=; unset $ac_var;} ;;
+ esac ;;
+ esac
+ done
(set) 2>&1 |
- case `(ac_space='"'"' '"'"'; set | grep ac_space) 2>&1` in
- *ac_space=\ *)
+ case $as_nl`(ac_space='\'' '\''; set) 2>&1` in #(
+ *${as_nl}ac_space=\ *)
sed -n \
- "s/'"'"'/'"'"'\\\\'"'"''"'"'/g;
- s/^\\([_$as_cr_alnum]*_cv_[_$as_cr_alnum]*\\)=\\(.*\\)/\\1='"'"'\\2'"'"'/p"
- ;;
+ "s/'\''/'\''\\\\'\'''\''/g;
+ s/^\\([_$as_cr_alnum]*_cv_[_$as_cr_alnum]*\\)=\\(.*\\)/\\1='\''\\2'\''/p"
+ ;; #(
*)
- sed -n \
- "s/^\\([_$as_cr_alnum]*_cv_[_$as_cr_alnum]*\\)=\\(.*\\)/\\1=\\2/p"
+ sed -n "/^[_$as_cr_alnum]*_cv_[_$as_cr_alnum]*=/p"
;;
- esac;
-}
+ esac |
+ sort
+)
echo
- cat <<\_ASBOX
-## ----------------- ##
+ $as_echo "## ----------------- ##
## Output variables. ##
-## ----------------- ##
-_ASBOX
+## ----------------- ##"
echo
for ac_var in $ac_subst_vars
do
- eval ac_val=$`echo $ac_var`
- echo "$ac_var='"'"'$ac_val'"'"'"
+ eval ac_val=\$$ac_var
+ case $ac_val in
+ *\'\''*) ac_val=`$as_echo "$ac_val" | sed "s/'\''/'\''\\\\\\\\'\'''\''/g"`;;
+ esac
+ $as_echo "$ac_var='\''$ac_val'\''"
done | sort
echo
if test -n "$ac_subst_files"; then
- cat <<\_ASBOX
-## ------------- ##
-## Output files. ##
-## ------------- ##
-_ASBOX
+ $as_echo "## ------------------- ##
+## File substitutions. ##
+## ------------------- ##"
echo
for ac_var in $ac_subst_files
do
- eval ac_val=$`echo $ac_var`
- echo "$ac_var='"'"'$ac_val'"'"'"
+ eval ac_val=\$$ac_var
+ case $ac_val in
+ *\'\''*) ac_val=`$as_echo "$ac_val" | sed "s/'\''/'\''\\\\\\\\'\'''\''/g"`;;
+ esac
+ $as_echo "$ac_var='\''$ac_val'\''"
done | sort
echo
fi
if test -s confdefs.h; then
- cat <<\_ASBOX
-## ----------- ##
+ $as_echo "## ----------- ##
## confdefs.h. ##
-## ----------- ##
-_ASBOX
+## ----------- ##"
echo
- sed "/^$/d" confdefs.h | sort
+ cat confdefs.h
echo
fi
test "$ac_signal" != 0 &&
- echo "$as_me: caught signal $ac_signal"
- echo "$as_me: exit $exit_status"
+ $as_echo "$as_me: caught signal $ac_signal"
+ $as_echo "$as_me: exit $exit_status"
} >&5
- rm -f core *.core &&
- rm -rf conftest* confdefs* conf$$* $ac_clean_files &&
+ rm -f core *.core core.conftest.* &&
+ rm -f -r conftest* confdefs* conf$$* $ac_clean_files &&
exit $exit_status
- ' 0
+' 0
for ac_signal in 1 2 13 15; do
- trap 'ac_signal='$ac_signal'; { (exit 1); exit 1; }' $ac_signal
+ trap 'ac_signal='$ac_signal'; as_fn_exit 1' $ac_signal
done
ac_signal=0
# confdefs.h avoids OS command line length limits that DEFS can exceed.
-rm -rf conftest* confdefs.h
-# AIX cpp loses on an empty file, so make sure it contains at least a newline.
-echo >confdefs.h
+rm -f -r conftest* confdefs.h
+
+$as_echo "/* confdefs.h */" > confdefs.h
# Predefined preprocessor variables.
@@ -1209,112 +2154,137 @@ cat >>confdefs.h <<_ACEOF
#define PACKAGE_NAME "$PACKAGE_NAME"
_ACEOF
-
cat >>confdefs.h <<_ACEOF
#define PACKAGE_TARNAME "$PACKAGE_TARNAME"
_ACEOF
-
cat >>confdefs.h <<_ACEOF
#define PACKAGE_VERSION "$PACKAGE_VERSION"
_ACEOF
-
cat >>confdefs.h <<_ACEOF
#define PACKAGE_STRING "$PACKAGE_STRING"
_ACEOF
-
cat >>confdefs.h <<_ACEOF
#define PACKAGE_BUGREPORT "$PACKAGE_BUGREPORT"
_ACEOF
+cat >>confdefs.h <<_ACEOF
+#define PACKAGE_URL "$PACKAGE_URL"
+_ACEOF
+
# Let the site file select an alternate cache file if it wants to.
-# Prefer explicitly selected file to automatically selected ones.
-if test -z "$CONFIG_SITE"; then
- if test "x$prefix" != xNONE; then
- CONFIG_SITE="$prefix/share/config.site $prefix/etc/config.site"
- else
- CONFIG_SITE="$ac_default_prefix/share/config.site $ac_default_prefix/etc/config.site"
- fi
+# Prefer an explicitly selected file to automatically selected ones.
+ac_site_file1=NONE
+ac_site_file2=NONE
+if test -n "$CONFIG_SITE"; then
+ # We do not want a PATH search for config.site.
+ case $CONFIG_SITE in #((
+ -*) ac_site_file1=./$CONFIG_SITE;;
+ */*) ac_site_file1=$CONFIG_SITE;;
+ *) ac_site_file1=./$CONFIG_SITE;;
+ esac
+elif test "x$prefix" != xNONE; then
+ ac_site_file1=$prefix/share/config.site
+ ac_site_file2=$prefix/etc/config.site
+else
+ ac_site_file1=$ac_default_prefix/share/config.site
+ ac_site_file2=$ac_default_prefix/etc/config.site
fi
-for ac_site_file in $CONFIG_SITE; do
- if test -r "$ac_site_file"; then
- { echo "$as_me:$LINENO: loading site script $ac_site_file" >&5
-echo "$as_me: loading site script $ac_site_file" >&6;}
+for ac_site_file in "$ac_site_file1" "$ac_site_file2"
+do
+ test "x$ac_site_file" = xNONE && continue
+ if test /dev/null != "$ac_site_file" && test -r "$ac_site_file"; then
+ { $as_echo "$as_me:${as_lineno-$LINENO}: loading site script $ac_site_file" >&5
+$as_echo "$as_me: loading site script $ac_site_file" >&6;}
sed 's/^/| /' "$ac_site_file" >&5
- . "$ac_site_file"
+ . "$ac_site_file" \
+ || { { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
+$as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
+as_fn_error $? "failed to load site script $ac_site_file
+See \`config.log' for more details" "$LINENO" 5; }
fi
done
if test -r "$cache_file"; then
- # Some versions of bash will fail to source /dev/null (special
- # files actually), so we avoid doing that.
- if test -f "$cache_file"; then
- { echo "$as_me:$LINENO: loading cache $cache_file" >&5
-echo "$as_me: loading cache $cache_file" >&6;}
+ # Some versions of bash will fail to source /dev/null (special files
+ # actually), so we avoid doing that. DJGPP emulates it as a regular file.
+ if test /dev/null != "$cache_file" && test -f "$cache_file"; then
+ { $as_echo "$as_me:${as_lineno-$LINENO}: loading cache $cache_file" >&5
+$as_echo "$as_me: loading cache $cache_file" >&6;}
case $cache_file in
- [\\/]* | ?:[\\/]* ) . $cache_file;;
- *) . ./$cache_file;;
+ [\\/]* | ?:[\\/]* ) . "$cache_file";;
+ *) . "./$cache_file";;
esac
fi
else
- { echo "$as_me:$LINENO: creating cache $cache_file" >&5
-echo "$as_me: creating cache $cache_file" >&6;}
+ { $as_echo "$as_me:${as_lineno-$LINENO}: creating cache $cache_file" >&5
+$as_echo "$as_me: creating cache $cache_file" >&6;}
>$cache_file
fi
# Check that the precious variables saved in the cache have kept the same
# value.
ac_cache_corrupted=false
-for ac_var in `(set) 2>&1 |
- sed -n 's/^ac_env_\([a-zA-Z_0-9]*\)_set=.*/\1/p'`; do
+for ac_var in $ac_precious_vars; do
eval ac_old_set=\$ac_cv_env_${ac_var}_set
eval ac_new_set=\$ac_env_${ac_var}_set
- eval ac_old_val="\$ac_cv_env_${ac_var}_value"
- eval ac_new_val="\$ac_env_${ac_var}_value"
+ eval ac_old_val=\$ac_cv_env_${ac_var}_value
+ eval ac_new_val=\$ac_env_${ac_var}_value
case $ac_old_set,$ac_new_set in
set,)
- { echo "$as_me:$LINENO: error: \`$ac_var' was set to \`$ac_old_val' in the previous run" >&5
-echo "$as_me: error: \`$ac_var' was set to \`$ac_old_val' in the previous run" >&2;}
+ { $as_echo "$as_me:${as_lineno-$LINENO}: error: \`$ac_var' was set to \`$ac_old_val' in the previous run" >&5
+$as_echo "$as_me: error: \`$ac_var' was set to \`$ac_old_val' in the previous run" >&2;}
ac_cache_corrupted=: ;;
,set)
- { echo "$as_me:$LINENO: error: \`$ac_var' was not set in the previous run" >&5
-echo "$as_me: error: \`$ac_var' was not set in the previous run" >&2;}
+ { $as_echo "$as_me:${as_lineno-$LINENO}: error: \`$ac_var' was not set in the previous run" >&5
+$as_echo "$as_me: error: \`$ac_var' was not set in the previous run" >&2;}
ac_cache_corrupted=: ;;
,);;
*)
if test "x$ac_old_val" != "x$ac_new_val"; then
- { echo "$as_me:$LINENO: error: \`$ac_var' has changed since the previous run:" >&5
-echo "$as_me: error: \`$ac_var' has changed since the previous run:" >&2;}
- { echo "$as_me:$LINENO: former value: $ac_old_val" >&5
-echo "$as_me: former value: $ac_old_val" >&2;}
- { echo "$as_me:$LINENO: current value: $ac_new_val" >&5
-echo "$as_me: current value: $ac_new_val" >&2;}
- ac_cache_corrupted=:
+ # differences in whitespace do not lead to failure.
+ ac_old_val_w=`echo x $ac_old_val`
+ ac_new_val_w=`echo x $ac_new_val`
+ if test "$ac_old_val_w" != "$ac_new_val_w"; then
+ { $as_echo "$as_me:${as_lineno-$LINENO}: error: \`$ac_var' has changed since the previous run:" >&5
+$as_echo "$as_me: error: \`$ac_var' has changed since the previous run:" >&2;}
+ ac_cache_corrupted=:
+ else
+ { $as_echo "$as_me:${as_lineno-$LINENO}: warning: ignoring whitespace changes in \`$ac_var' since the previous run:" >&5
+$as_echo "$as_me: warning: ignoring whitespace changes in \`$ac_var' since the previous run:" >&2;}
+ eval $ac_var=\$ac_old_val
+ fi
+ { $as_echo "$as_me:${as_lineno-$LINENO}: former value: \`$ac_old_val'" >&5
+$as_echo "$as_me: former value: \`$ac_old_val'" >&2;}
+ { $as_echo "$as_me:${as_lineno-$LINENO}: current value: \`$ac_new_val'" >&5
+$as_echo "$as_me: current value: \`$ac_new_val'" >&2;}
fi;;
esac
# Pass precious variables to config.status.
if test "$ac_new_set" = set; then
case $ac_new_val in
- *" "*|*" "*|*[\[\]\~\#\$\^\&\*\(\)\{\}\\\|\;\<\>\?\"\']*)
- ac_arg=$ac_var=`echo "$ac_new_val" | sed "s/'/'\\\\\\\\''/g"` ;;
+ *\'*) ac_arg=$ac_var=`$as_echo "$ac_new_val" | sed "s/'/'\\\\\\\\''/g"` ;;
*) ac_arg=$ac_var=$ac_new_val ;;
esac
case " $ac_configure_args " in
*" '$ac_arg' "*) ;; # Avoid dups. Use of quotes ensures accuracy.
- *) ac_configure_args="$ac_configure_args '$ac_arg'" ;;
+ *) as_fn_append ac_configure_args " '$ac_arg'" ;;
esac
fi
done
if $ac_cache_corrupted; then
- { echo "$as_me:$LINENO: error: changes in the environment can compromise the build" >&5
-echo "$as_me: error: changes in the environment can compromise the build" >&2;}
- { { echo "$as_me:$LINENO: error: run \`make distclean' and/or \`rm $cache_file' and start over" >&5
-echo "$as_me: error: run \`make distclean' and/or \`rm $cache_file' and start over" >&2;}
- { (exit 1); exit 1; }; }
+ { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
+$as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
+ { $as_echo "$as_me:${as_lineno-$LINENO}: error: changes in the environment can compromise the build" >&5
+$as_echo "$as_me: error: changes in the environment can compromise the build" >&2;}
+ as_fn_error $? "run \`make distclean' and/or \`rm $cache_file' and start over" "$LINENO" 5
fi
+## -------------------- ##
+## Main body of script. ##
+## -------------------- ##
ac_ext=c
ac_cpp='$CPP $CPPFLAGS'
@@ -1324,65 +2294,43 @@ ac_compiler_gnu=$ac_cv_c_compiler_gnu
+$as_echo "#define SVN_REVISION \"4318\"" >>confdefs.h
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-cat >>confdefs.h <<\_ACEOF
-#define SVN_REVISION "4306M"
-_ACEOF
-
-
-
- ac_config_headers="$ac_config_headers config.h"
+ac_config_headers="$ac_config_headers config.h"
# AC_CONFIG_AUX_DIR([build-aux])
-am__api_version="1.9"
+am__api_version='1.12'
+
ac_aux_dir=
-for ac_dir in $srcdir $srcdir/.. $srcdir/../..; do
- if test -f $ac_dir/install-sh; then
+for ac_dir in "$srcdir" "$srcdir/.." "$srcdir/../.."; do
+ if test -f "$ac_dir/install-sh"; then
ac_aux_dir=$ac_dir
ac_install_sh="$ac_aux_dir/install-sh -c"
break
- elif test -f $ac_dir/install.sh; then
+ elif test -f "$ac_dir/install.sh"; then
ac_aux_dir=$ac_dir
ac_install_sh="$ac_aux_dir/install.sh -c"
break
- elif test -f $ac_dir/shtool; then
+ elif test -f "$ac_dir/shtool"; then
ac_aux_dir=$ac_dir
ac_install_sh="$ac_aux_dir/shtool install -c"
break
fi
done
if test -z "$ac_aux_dir"; then
- { { echo "$as_me:$LINENO: error: cannot find install-sh or install.sh in $srcdir $srcdir/.. $srcdir/../.." >&5
-echo "$as_me: error: cannot find install-sh or install.sh in $srcdir $srcdir/.. $srcdir/../.." >&2;}
- { (exit 1); exit 1; }; }
+ as_fn_error $? "cannot find install-sh, install.sh, or shtool in \"$srcdir\" \"$srcdir/..\" \"$srcdir/../..\"" "$LINENO" 5
fi
-ac_config_guess="$SHELL $ac_aux_dir/config.guess"
-ac_config_sub="$SHELL $ac_aux_dir/config.sub"
-ac_configure="$SHELL $ac_aux_dir/configure" # This should be Cygnus configure.
+
+# These three variables are undocumented and unsupported,
+# and are intended to be withdrawn in a future Autoconf release.
+# They can cause serious problems if a builder's source tree is in a directory
+# whose full name contains unusual characters.
+ac_config_guess="$SHELL $ac_aux_dir/config.guess" # Please don't use this var.
+ac_config_sub="$SHELL $ac_aux_dir/config.sub" # Please don't use this var.
+ac_configure="$SHELL $ac_aux_dir/configure" # Please don't use this var.
+
# Find a good install program. We prefer a C program (faster),
# so one script is as good as another. But avoid the broken or
@@ -1397,22 +2345,23 @@ ac_configure="$SHELL $ac_aux_dir/configure" # This should be Cygnus configure.
# SVR4 /usr/ucb/install, which tries to use the nonexistent group "staff"
# OS/2's system install, which has a completely different semantic
# ./install, which can be erroneously created by make from ./install.sh.
-echo "$as_me:$LINENO: checking for a BSD-compatible install" >&5
-echo $ECHO_N "checking for a BSD-compatible install... $ECHO_C" >&6
+# Reject install programs that cannot install multiple files.
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for a BSD-compatible install" >&5
+$as_echo_n "checking for a BSD-compatible install... " >&6; }
if test -z "$INSTALL"; then
-if test "${ac_cv_path_install+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
+if ${ac_cv_path_install+:} false; then :
+ $as_echo_n "(cached) " >&6
else
as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
for as_dir in $PATH
do
IFS=$as_save_IFS
test -z "$as_dir" && as_dir=.
- # Account for people who put trailing slashes in PATH elements.
-case $as_dir/ in
- ./ | .// | /cC/* | \
+ # Account for people who put trailing slashes in PATH elements.
+case $as_dir/ in #((
+ ./ | .// | /[cC]/* | \
/etc/* | /usr/sbin/* | /usr/etc/* | /sbin/* | /usr/afsws/bin/* | \
- ?:\\/os2\\/install\\/* | ?:\\/OS2\\/INSTALL\\/* | \
+ ?:[\\/]os2[\\/]install[\\/]* | ?:[\\/]OS2[\\/]INSTALL[\\/]* | \
/usr/ucb/* ) ;;
*)
# OSF1 and SCO ODT 3.0 have their own names for install.
@@ -1420,7 +2369,7 @@ case $as_dir/ in
# by default.
for ac_prog in ginstall scoinst install; do
for ac_exec_ext in '' $ac_executable_extensions; do
- if $as_executable_p "$as_dir/$ac_prog$ac_exec_ext"; then
+ if as_fn_executable_p "$as_dir/$ac_prog$ac_exec_ext"; then
if test $ac_prog = install &&
grep dspmsg "$as_dir/$ac_prog$ac_exec_ext" >/dev/null 2>&1; then
# AIX install. It has an incompatible calling convention.
@@ -1430,30 +2379,43 @@ case $as_dir/ in
# program-specific install script used by HP pwplus--don't use.
:
else
- ac_cv_path_install="$as_dir/$ac_prog$ac_exec_ext -c"
- break 3
+ rm -rf conftest.one conftest.two conftest.dir
+ echo one > conftest.one
+ echo two > conftest.two
+ mkdir conftest.dir
+ if "$as_dir/$ac_prog$ac_exec_ext" -c conftest.one conftest.two "`pwd`/conftest.dir" &&
+ test -s conftest.one && test -s conftest.two &&
+ test -s conftest.dir/conftest.one &&
+ test -s conftest.dir/conftest.two
+ then
+ ac_cv_path_install="$as_dir/$ac_prog$ac_exec_ext -c"
+ break 3
+ fi
fi
fi
done
done
;;
esac
-done
+ done
+IFS=$as_save_IFS
+
+rm -rf conftest.one conftest.two conftest.dir
fi
if test "${ac_cv_path_install+set}" = set; then
INSTALL=$ac_cv_path_install
else
- # As a last resort, use the slow shell script. We don't cache a
- # path for INSTALL within a source directory, because that will
+ # As a last resort, use the slow shell script. Don't cache a
+ # value for INSTALL within a source directory, because that will
# break other packages using the cache if that directory is
- # removed, or if the path is relative.
+ # removed, or if the value is a relative name.
INSTALL=$ac_install_sh
fi
fi
-echo "$as_me:$LINENO: result: $INSTALL" >&5
-echo "${ECHO_T}$INSTALL" >&6
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $INSTALL" >&5
+$as_echo "$INSTALL" >&6; }
# Use test -z because SunOS4 sh mishandles braces in ${var-val}.
# It thinks the first close brace ends the variable substitution.
@@ -1463,118 +2425,262 @@ test -z "$INSTALL_SCRIPT" && INSTALL_SCRIPT='${INSTALL}'
test -z "$INSTALL_DATA" && INSTALL_DATA='${INSTALL} -m 644'
-echo "$as_me:$LINENO: checking whether build environment is sane" >&5
-echo $ECHO_N "checking whether build environment is sane... $ECHO_C" >&6
-# Just in case
-sleep 1
-echo timestamp > conftest.file
-# Do `set' in a subshell so we don't clobber the current shell's
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking whether build environment is sane" >&5
+$as_echo_n "checking whether build environment is sane... " >&6; }
+# Reject unsafe characters in $srcdir or the absolute working directory
+# name. Accept space and tab only in the latter.
+am_lf='
+'
+case `pwd` in
+ *[\\\"\#\$\&\'\`$am_lf]*)
+ as_fn_error $? "unsafe absolute working directory name" "$LINENO" 5;;
+esac
+case $srcdir in
+ *[\\\"\#\$\&\'\`$am_lf\ \ ]*)
+ as_fn_error $? "unsafe srcdir value: '$srcdir'" "$LINENO" 5;;
+esac
+
+# Do 'set' in a subshell so we don't clobber the current shell's
# arguments. Must try -L first in case configure is actually a
# symlink; some systems play weird games with the mod time of symlinks
# (eg FreeBSD returns the mod time of the symlink's containing
# directory).
if (
- set X `ls -Lt $srcdir/configure conftest.file 2> /dev/null`
- if test "$*" = "X"; then
- # -L didn't work.
- set X `ls -t $srcdir/configure conftest.file`
- fi
- rm -f conftest.file
- if test "$*" != "X $srcdir/configure conftest.file" \
- && test "$*" != "X conftest.file $srcdir/configure"; then
-
- # If neither matched, then we have a broken ls. This can happen
- # if, for instance, CONFIG_SHELL is bash and it inherits a
- # broken ls alias from the environment. This has actually
- # happened. Such a system could not be considered "sane".
- { { echo "$as_me:$LINENO: error: ls -t appears to fail. Make sure there is not a broken
-alias in your environment" >&5
-echo "$as_me: error: ls -t appears to fail. Make sure there is not a broken
-alias in your environment" >&2;}
- { (exit 1); exit 1; }; }
- fi
-
+ am_has_slept=no
+ for am_try in 1 2; do
+ echo "timestamp, slept: $am_has_slept" > conftest.file
+ set X `ls -Lt "$srcdir/configure" conftest.file 2> /dev/null`
+ if test "$*" = "X"; then
+ # -L didn't work.
+ set X `ls -t "$srcdir/configure" conftest.file`
+ fi
+ if test "$*" != "X $srcdir/configure conftest.file" \
+ && test "$*" != "X conftest.file $srcdir/configure"; then
+
+ # If neither matched, then we have a broken ls. This can happen
+ # if, for instance, CONFIG_SHELL is bash and it inherits a
+ # broken ls alias from the environment. This has actually
+ # happened. Such a system could not be considered "sane".
+ as_fn_error $? "ls -t appears to fail. Make sure there is not a broken
+ alias in your environment" "$LINENO" 5
+ fi
+ if test "$2" = conftest.file || test $am_try -eq 2; then
+ break
+ fi
+ # Just in case.
+ sleep 1
+ am_has_slept=yes
+ done
test "$2" = conftest.file
)
then
# Ok.
:
else
- { { echo "$as_me:$LINENO: error: newly created file is older than distributed files!
-Check your system clock" >&5
-echo "$as_me: error: newly created file is older than distributed files!
-Check your system clock" >&2;}
- { (exit 1); exit 1; }; }
+ as_fn_error $? "newly created file is older than distributed files!
+Check your system clock" "$LINENO" 5
+fi
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
+$as_echo "yes" >&6; }
+# If we didn't sleep, we still need to ensure time stamps of config.status and
+# generated files are strictly newer.
+am_sleep_pid=
+if grep 'slept: no' conftest.file >/dev/null 2>&1; then
+ ( sleep 1 ) &
+ am_sleep_pid=$!
fi
-echo "$as_me:$LINENO: result: yes" >&5
-echo "${ECHO_T}yes" >&6
+
+rm -f conftest.file
+
test "$program_prefix" != NONE &&
- program_transform_name="s,^,$program_prefix,;$program_transform_name"
+ program_transform_name="s&^&$program_prefix&;$program_transform_name"
# Use a double $ so make ignores it.
test "$program_suffix" != NONE &&
- program_transform_name="s,\$,$program_suffix,;$program_transform_name"
-# Double any \ or $. echo might interpret backslashes.
+ program_transform_name="s&\$&$program_suffix&;$program_transform_name"
+# Double any \ or $.
# By default was `s,x,x', remove it if useless.
-cat <<\_ACEOF >conftest.sed
-s/[\\$]/&&/g;s/;s,x,x,$//
-_ACEOF
-program_transform_name=`echo $program_transform_name | sed -f conftest.sed`
-rm conftest.sed
+ac_script='s/[\\$]/&&/g;s/;s,x,x,$//'
+program_transform_name=`$as_echo "$program_transform_name" | sed "$ac_script"`
# expand $ac_aux_dir to an absolute path
am_aux_dir=`cd $ac_aux_dir && pwd`
-test x"${MISSING+set}" = xset || MISSING="\${SHELL} $am_aux_dir/missing"
+if test x"${MISSING+set}" != xset; then
+ case $am_aux_dir in
+ *\ * | *\ *)
+ MISSING="\${SHELL} \"$am_aux_dir/missing\"" ;;
+ *)
+ MISSING="\${SHELL} $am_aux_dir/missing" ;;
+ esac
+fi
# Use eval to expand $SHELL
if eval "$MISSING --run true"; then
am_missing_run="$MISSING --run "
else
am_missing_run=
- { echo "$as_me:$LINENO: WARNING: \`missing' script is too old or missing" >&5
-echo "$as_me: WARNING: \`missing' script is too old or missing" >&2;}
-fi
-
-if mkdir -p --version . >/dev/null 2>&1 && test ! -d ./--version; then
- # We used to keeping the `.' as first argument, in order to
- # allow $(mkdir_p) to be used without argument. As in
- # $(mkdir_p) $(somedir)
- # where $(somedir) is conditionally defined. However this is wrong
- # for two reasons:
- # 1. if the package is installed by a user who cannot write `.'
- # make install will fail,
- # 2. the above comment should most certainly read
- # $(mkdir_p) $(DESTDIR)$(somedir)
- # so it does not work when $(somedir) is undefined and
- # $(DESTDIR) is not.
- # To support the latter case, we have to write
- # test -z "$(somedir)" || $(mkdir_p) $(DESTDIR)$(somedir),
- # so the `.' trick is pointless.
- mkdir_p='mkdir -p --'
-else
- # On NextStep and OpenStep, the `mkdir' command does not
- # recognize any option. It will interpret all options as
- # directories to create, and then abort because `.' already
- # exists.
- for d in ./-p ./--version;
- do
- test -d $d && rmdir $d
- done
- # $(mkinstalldirs) is defined by Automake if mkinstalldirs exists.
- if test -f "$ac_aux_dir/mkinstalldirs"; then
- mkdir_p='$(mkinstalldirs)'
+ { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: 'missing' script is too old or missing" >&5
+$as_echo "$as_me: WARNING: 'missing' script is too old or missing" >&2;}
+fi
+
+if test x"${install_sh}" != xset; then
+ case $am_aux_dir in
+ *\ * | *\ *)
+ install_sh="\${SHELL} '$am_aux_dir/install-sh'" ;;
+ *)
+ install_sh="\${SHELL} $am_aux_dir/install-sh"
+ esac
+fi
+
+# Installed binaries are usually stripped using 'strip' when the user
+# run "make install-strip". However 'strip' might not be the right
+# tool to use in cross-compilation environments, therefore Automake
+# will honor the 'STRIP' environment variable to overrule this program.
+if test "$cross_compiling" != no; then
+ if test -n "$ac_tool_prefix"; then
+ # Extract the first word of "${ac_tool_prefix}strip", so it can be a program name with args.
+set dummy ${ac_tool_prefix}strip; ac_word=$2
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
+$as_echo_n "checking for $ac_word... " >&6; }
+if ${ac_cv_prog_STRIP+:} false; then :
+ $as_echo_n "(cached) " >&6
+else
+ if test -n "$STRIP"; then
+ ac_cv_prog_STRIP="$STRIP" # Let the user override the test.
+else
+as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
+for as_dir in $PATH
+do
+ IFS=$as_save_IFS
+ test -z "$as_dir" && as_dir=.
+ for ac_exec_ext in '' $ac_executable_extensions; do
+ if as_fn_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
+ ac_cv_prog_STRIP="${ac_tool_prefix}strip"
+ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
+ break 2
+ fi
+done
+ done
+IFS=$as_save_IFS
+
+fi
+fi
+STRIP=$ac_cv_prog_STRIP
+if test -n "$STRIP"; then
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $STRIP" >&5
+$as_echo "$STRIP" >&6; }
+else
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
+$as_echo "no" >&6; }
+fi
+
+
+fi
+if test -z "$ac_cv_prog_STRIP"; then
+ ac_ct_STRIP=$STRIP
+ # Extract the first word of "strip", so it can be a program name with args.
+set dummy strip; ac_word=$2
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
+$as_echo_n "checking for $ac_word... " >&6; }
+if ${ac_cv_prog_ac_ct_STRIP+:} false; then :
+ $as_echo_n "(cached) " >&6
+else
+ if test -n "$ac_ct_STRIP"; then
+ ac_cv_prog_ac_ct_STRIP="$ac_ct_STRIP" # Let the user override the test.
+else
+as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
+for as_dir in $PATH
+do
+ IFS=$as_save_IFS
+ test -z "$as_dir" && as_dir=.
+ for ac_exec_ext in '' $ac_executable_extensions; do
+ if as_fn_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
+ ac_cv_prog_ac_ct_STRIP="strip"
+ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
+ break 2
+ fi
+done
+ done
+IFS=$as_save_IFS
+
+fi
+fi
+ac_ct_STRIP=$ac_cv_prog_ac_ct_STRIP
+if test -n "$ac_ct_STRIP"; then
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_ct_STRIP" >&5
+$as_echo "$ac_ct_STRIP" >&6; }
+else
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
+$as_echo "no" >&6; }
+fi
+
+ if test "x$ac_ct_STRIP" = x; then
+ STRIP=":"
+ else
+ case $cross_compiling:$ac_tool_warned in
+yes:)
+{ $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: using cross tools not prefixed with host triplet" >&5
+$as_echo "$as_me: WARNING: using cross tools not prefixed with host triplet" >&2;}
+ac_tool_warned=yes ;;
+esac
+ STRIP=$ac_ct_STRIP
+ fi
+else
+ STRIP="$ac_cv_prog_STRIP"
+fi
+
+fi
+INSTALL_STRIP_PROGRAM="\$(install_sh) -c -s"
+
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for a thread-safe mkdir -p" >&5
+$as_echo_n "checking for a thread-safe mkdir -p... " >&6; }
+if test -z "$MKDIR_P"; then
+ if ${ac_cv_path_mkdir+:} false; then :
+ $as_echo_n "(cached) " >&6
+else
+ as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
+for as_dir in $PATH$PATH_SEPARATOR/opt/sfw/bin
+do
+ IFS=$as_save_IFS
+ test -z "$as_dir" && as_dir=.
+ for ac_prog in mkdir gmkdir; do
+ for ac_exec_ext in '' $ac_executable_extensions; do
+ as_fn_executable_p "$as_dir/$ac_prog$ac_exec_ext" || continue
+ case `"$as_dir/$ac_prog$ac_exec_ext" --version 2>&1` in #(
+ 'mkdir (GNU coreutils) '* | \
+ 'mkdir (coreutils) '* | \
+ 'mkdir (fileutils) '4.1*)
+ ac_cv_path_mkdir=$as_dir/$ac_prog$ac_exec_ext
+ break 3;;
+ esac
+ done
+ done
+ done
+IFS=$as_save_IFS
+
+fi
+
+ test -d ./--version && rmdir ./--version
+ if test "${ac_cv_path_mkdir+set}" = set; then
+ MKDIR_P="$ac_cv_path_mkdir -p"
else
- mkdir_p='$(install_sh) -d'
+ # As a last resort, use the slow shell script. Don't cache a
+ # value for MKDIR_P within a source directory, because that will
+ # break other packages using the cache if that directory is
+ # removed, or if the value is a relative name.
+ MKDIR_P="$ac_install_sh -d"
fi
fi
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $MKDIR_P" >&5
+$as_echo "$MKDIR_P" >&6; }
for ac_prog in gawk mawk nawk awk
do
# Extract the first word of "$ac_prog", so it can be a program name with args.
set dummy $ac_prog; ac_word=$2
-echo "$as_me:$LINENO: checking for $ac_word" >&5
-echo $ECHO_N "checking for $ac_word... $ECHO_C" >&6
-if test "${ac_cv_prog_AWK+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
+$as_echo_n "checking for $ac_word... " >&6; }
+if ${ac_cv_prog_AWK+:} false; then :
+ $as_echo_n "(cached) " >&6
else
if test -n "$AWK"; then
ac_cv_prog_AWK="$AWK" # Let the user override the test.
@@ -1584,55 +2690,59 @@ for as_dir in $PATH
do
IFS=$as_save_IFS
test -z "$as_dir" && as_dir=.
- for ac_exec_ext in '' $ac_executable_extensions; do
- if $as_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
+ for ac_exec_ext in '' $ac_executable_extensions; do
+ if as_fn_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
ac_cv_prog_AWK="$ac_prog"
- echo "$as_me:$LINENO: found $as_dir/$ac_word$ac_exec_ext" >&5
+ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
break 2
fi
done
-done
+ done
+IFS=$as_save_IFS
fi
fi
AWK=$ac_cv_prog_AWK
if test -n "$AWK"; then
- echo "$as_me:$LINENO: result: $AWK" >&5
-echo "${ECHO_T}$AWK" >&6
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $AWK" >&5
+$as_echo "$AWK" >&6; }
else
- echo "$as_me:$LINENO: result: no" >&5
-echo "${ECHO_T}no" >&6
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
+$as_echo "no" >&6; }
fi
+
test -n "$AWK" && break
done
-echo "$as_me:$LINENO: checking whether ${MAKE-make} sets \$(MAKE)" >&5
-echo $ECHO_N "checking whether ${MAKE-make} sets \$(MAKE)... $ECHO_C" >&6
-set dummy ${MAKE-make}; ac_make=`echo "$2" | sed 'y,:./+-,___p_,'`
-if eval "test \"\${ac_cv_prog_make_${ac_make}_set+set}\" = set"; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking whether ${MAKE-make} sets \$(MAKE)" >&5
+$as_echo_n "checking whether ${MAKE-make} sets \$(MAKE)... " >&6; }
+set x ${MAKE-make}
+ac_make=`$as_echo "$2" | sed 's/+/p/g; s/[^a-zA-Z0-9_]/_/g'`
+if eval \${ac_cv_prog_make_${ac_make}_set+:} false; then :
+ $as_echo_n "(cached) " >&6
else
cat >conftest.make <<\_ACEOF
+SHELL = /bin/sh
all:
- @echo 'ac_maketemp="$(MAKE)"'
+ @echo '@@@%%%=$(MAKE)=@@@%%%'
_ACEOF
-# GNU make sometimes prints "make[1]: Entering...", which would confuse us.
-eval `${MAKE-make} -f conftest.make 2>/dev/null | grep temp=`
-if test -n "$ac_maketemp"; then
- eval ac_cv_prog_make_${ac_make}_set=yes
-else
- eval ac_cv_prog_make_${ac_make}_set=no
-fi
+# GNU make sometimes prints "make[1]: Entering ...", which would confuse us.
+case `${MAKE-make} -f conftest.make 2>/dev/null` in
+ *@@@%%%=?*=@@@%%%*)
+ eval ac_cv_prog_make_${ac_make}_set=yes;;
+ *)
+ eval ac_cv_prog_make_${ac_make}_set=no;;
+esac
rm -f conftest.make
fi
-if eval "test \"`echo '$ac_cv_prog_make_'${ac_make}_set`\" = yes"; then
- echo "$as_me:$LINENO: result: yes" >&5
-echo "${ECHO_T}yes" >&6
+if eval test \$ac_cv_prog_make_${ac_make}_set = yes; then
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
+$as_echo "yes" >&6; }
SET_MAKE=
else
- echo "$as_me:$LINENO: result: no" >&5
-echo "${ECHO_T}no" >&6
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
+$as_echo "no" >&6; }
SET_MAKE="MAKE=${MAKE-make}"
fi
@@ -1645,12 +2755,14 @@ else
fi
rmdir .tst 2>/dev/null
-# test to see if srcdir already configured
-if test "`cd $srcdir && pwd`" != "`pwd`" &&
- test -f $srcdir/config.status; then
- { { echo "$as_me:$LINENO: error: source directory already configured; run \"make distclean\" there first" >&5
-echo "$as_me: error: source directory already configured; run \"make distclean\" there first" >&2;}
- { (exit 1); exit 1; }; }
+if test "`cd $srcdir && pwd`" != "`pwd`"; then
+ # Use -I$(srcdir) only when $(srcdir) != ., so that make's output
+ # is not polluted with repeated "-I."
+ am__isrc=' -I$(srcdir)'
+ # test to see if srcdir already configured
+ if test -f $srcdir/config.status; then
+ as_fn_error $? "source directory already configured; run \"make distclean\" there first" "$LINENO" 5
+ fi
fi
# test whether we have cygpath
@@ -1665,7 +2777,7 @@ fi
# Define the identity of the package.
PACKAGE='tophat'
- VERSION='2.0.13'
+ VERSION='2.0.14'
cat >>confdefs.h <<_ACEOF
@@ -1693,103 +2805,19 @@ AUTOHEADER=${AUTOHEADER-"${am_missing_run}autoheader"}
MAKEINFO=${MAKEINFO-"${am_missing_run}makeinfo"}
-install_sh=${install_sh-"$am_aux_dir/install-sh"}
-
-# Installed binaries are usually stripped using `strip' when the user
-# run `make install-strip'. However `strip' might not be the right
-# tool to use in cross-compilation environments, therefore Automake
-# will honor the `STRIP' environment variable to overrule this program.
-if test "$cross_compiling" != no; then
- if test -n "$ac_tool_prefix"; then
- # Extract the first word of "${ac_tool_prefix}strip", so it can be a program name with args.
-set dummy ${ac_tool_prefix}strip; ac_word=$2
-echo "$as_me:$LINENO: checking for $ac_word" >&5
-echo $ECHO_N "checking for $ac_word... $ECHO_C" >&6
-if test "${ac_cv_prog_STRIP+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- if test -n "$STRIP"; then
- ac_cv_prog_STRIP="$STRIP" # Let the user override the test.
-else
-as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
-for as_dir in $PATH
-do
- IFS=$as_save_IFS
- test -z "$as_dir" && as_dir=.
- for ac_exec_ext in '' $ac_executable_extensions; do
- if $as_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
- ac_cv_prog_STRIP="${ac_tool_prefix}strip"
- echo "$as_me:$LINENO: found $as_dir/$ac_word$ac_exec_ext" >&5
- break 2
- fi
-done
-done
-
-fi
-fi
-STRIP=$ac_cv_prog_STRIP
-if test -n "$STRIP"; then
- echo "$as_me:$LINENO: result: $STRIP" >&5
-echo "${ECHO_T}$STRIP" >&6
-else
- echo "$as_me:$LINENO: result: no" >&5
-echo "${ECHO_T}no" >&6
-fi
-
-fi
-if test -z "$ac_cv_prog_STRIP"; then
- ac_ct_STRIP=$STRIP
- # Extract the first word of "strip", so it can be a program name with args.
-set dummy strip; ac_word=$2
-echo "$as_me:$LINENO: checking for $ac_word" >&5
-echo $ECHO_N "checking for $ac_word... $ECHO_C" >&6
-if test "${ac_cv_prog_ac_ct_STRIP+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- if test -n "$ac_ct_STRIP"; then
- ac_cv_prog_ac_ct_STRIP="$ac_ct_STRIP" # Let the user override the test.
-else
-as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
-for as_dir in $PATH
-do
- IFS=$as_save_IFS
- test -z "$as_dir" && as_dir=.
- for ac_exec_ext in '' $ac_executable_extensions; do
- if $as_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
- ac_cv_prog_ac_ct_STRIP="strip"
- echo "$as_me:$LINENO: found $as_dir/$ac_word$ac_exec_ext" >&5
- break 2
- fi
-done
-done
-
- test -z "$ac_cv_prog_ac_ct_STRIP" && ac_cv_prog_ac_ct_STRIP=":"
-fi
-fi
-ac_ct_STRIP=$ac_cv_prog_ac_ct_STRIP
-if test -n "$ac_ct_STRIP"; then
- echo "$as_me:$LINENO: result: $ac_ct_STRIP" >&5
-echo "${ECHO_T}$ac_ct_STRIP" >&6
-else
- echo "$as_me:$LINENO: result: no" >&5
-echo "${ECHO_T}no" >&6
-fi
-
- STRIP=$ac_ct_STRIP
-else
- STRIP="$ac_cv_prog_STRIP"
-fi
-
-fi
-INSTALL_STRIP_PROGRAM="\${SHELL} \$(install_sh) -c -s"
+# For better backward compatibility. To be removed once Automake 1.9.x
+# dies out for good. For more background, see:
+# <http://lists.gnu.org/archive/html/automake/2012-07/msg00001.html>
+# <http://lists.gnu.org/archive/html/automake/2012-07/msg00014.html>
+mkdir_p='$(MKDIR_P)'
# We need awk for the "check" target. The system "awk" is bad on
# some platforms.
-# Always define AMTAR for backward compatibility.
-
-AMTAR=${AMTAR-"${am_missing_run}tar"}
+# Always define AMTAR for backward compatibility. Yes, it's still used
+# in the wild :-( We should find a proper way to deprecate it ...
+AMTAR='$${TAR-tar}'
-am__tar='${AMTAR} chof - "$$tardir"'; am__untar='${AMTAR} xf -'
+am__tar='$${TAR-tar} chof - "$$tardir"' am__untar='$${TAR-tar} xf -'
@@ -1801,20 +2829,24 @@ am__tar='${AMTAR} chof - "$$tardir"'; am__untar='${AMTAR} xf -'
# Make sure CXXFLAGS is defined so that AC_PROG_CXX doesn't set it.
CXXFLAGS="$CXXFLAGS"
CFLAGS="$CFLAGS"
-ac_ext=cc
+ac_ext=cpp
ac_cpp='$CXXCPP $CPPFLAGS'
ac_compile='$CXX -c $CXXFLAGS $CPPFLAGS conftest.$ac_ext >&5'
ac_link='$CXX -o conftest$ac_exeext $CXXFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5'
ac_compiler_gnu=$ac_cv_cxx_compiler_gnu
-if test -n "$ac_tool_prefix"; then
- for ac_prog in $CCC g++ c++ gpp aCC CC cxx cc++ cl FCC KCC RCC xlC_r xlC
+if test -z "$CXX"; then
+ if test -n "$CCC"; then
+ CXX=$CCC
+ else
+ if test -n "$ac_tool_prefix"; then
+ for ac_prog in g++ c++ gpp aCC CC cxx cc++ cl.exe FCC KCC RCC xlC_r xlC
do
# Extract the first word of "$ac_tool_prefix$ac_prog", so it can be a program name with args.
set dummy $ac_tool_prefix$ac_prog; ac_word=$2
-echo "$as_me:$LINENO: checking for $ac_word" >&5
-echo $ECHO_N "checking for $ac_word... $ECHO_C" >&6
-if test "${ac_cv_prog_CXX+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
+$as_echo_n "checking for $ac_word... " >&6; }
+if ${ac_cv_prog_CXX+:} false; then :
+ $as_echo_n "(cached) " >&6
else
if test -n "$CXX"; then
ac_cv_prog_CXX="$CXX" # Let the user override the test.
@@ -1824,39 +2856,41 @@ for as_dir in $PATH
do
IFS=$as_save_IFS
test -z "$as_dir" && as_dir=.
- for ac_exec_ext in '' $ac_executable_extensions; do
- if $as_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
+ for ac_exec_ext in '' $ac_executable_extensions; do
+ if as_fn_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
ac_cv_prog_CXX="$ac_tool_prefix$ac_prog"
- echo "$as_me:$LINENO: found $as_dir/$ac_word$ac_exec_ext" >&5
+ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
break 2
fi
done
-done
+ done
+IFS=$as_save_IFS
fi
fi
CXX=$ac_cv_prog_CXX
if test -n "$CXX"; then
- echo "$as_me:$LINENO: result: $CXX" >&5
-echo "${ECHO_T}$CXX" >&6
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $CXX" >&5
+$as_echo "$CXX" >&6; }
else
- echo "$as_me:$LINENO: result: no" >&5
-echo "${ECHO_T}no" >&6
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
+$as_echo "no" >&6; }
fi
+
test -n "$CXX" && break
done
fi
if test -z "$CXX"; then
ac_ct_CXX=$CXX
- for ac_prog in $CCC g++ c++ gpp aCC CC cxx cc++ cl FCC KCC RCC xlC_r xlC
+ for ac_prog in g++ c++ gpp aCC CC cxx cc++ cl.exe FCC KCC RCC xlC_r xlC
do
# Extract the first word of "$ac_prog", so it can be a program name with args.
set dummy $ac_prog; ac_word=$2
-echo "$as_me:$LINENO: checking for $ac_word" >&5
-echo $ECHO_N "checking for $ac_word... $ECHO_C" >&6
-if test "${ac_cv_prog_ac_ct_CXX+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
+$as_echo_n "checking for $ac_word... " >&6; }
+if ${ac_cv_prog_ac_ct_CXX+:} false; then :
+ $as_echo_n "(cached) " >&6
else
if test -n "$ac_ct_CXX"; then
ac_cv_prog_ac_ct_CXX="$ac_ct_CXX" # Let the user override the test.
@@ -1866,59 +2900,72 @@ for as_dir in $PATH
do
IFS=$as_save_IFS
test -z "$as_dir" && as_dir=.
- for ac_exec_ext in '' $ac_executable_extensions; do
- if $as_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
+ for ac_exec_ext in '' $ac_executable_extensions; do
+ if as_fn_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
ac_cv_prog_ac_ct_CXX="$ac_prog"
- echo "$as_me:$LINENO: found $as_dir/$ac_word$ac_exec_ext" >&5
+ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
break 2
fi
done
-done
+ done
+IFS=$as_save_IFS
fi
fi
ac_ct_CXX=$ac_cv_prog_ac_ct_CXX
if test -n "$ac_ct_CXX"; then
- echo "$as_me:$LINENO: result: $ac_ct_CXX" >&5
-echo "${ECHO_T}$ac_ct_CXX" >&6
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_ct_CXX" >&5
+$as_echo "$ac_ct_CXX" >&6; }
else
- echo "$as_me:$LINENO: result: no" >&5
-echo "${ECHO_T}no" >&6
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
+$as_echo "no" >&6; }
fi
+
test -n "$ac_ct_CXX" && break
done
-test -n "$ac_ct_CXX" || ac_ct_CXX="g++"
- CXX=$ac_ct_CXX
+ if test "x$ac_ct_CXX" = x; then
+ CXX="g++"
+ else
+ case $cross_compiling:$ac_tool_warned in
+yes:)
+{ $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: using cross tools not prefixed with host triplet" >&5
+$as_echo "$as_me: WARNING: using cross tools not prefixed with host triplet" >&2;}
+ac_tool_warned=yes ;;
+esac
+ CXX=$ac_ct_CXX
+ fi
fi
-
+ fi
+fi
# Provide some information about the compiler.
-echo "$as_me:$LINENO:" \
- "checking for C++ compiler version" >&5
-ac_compiler=`set X $ac_compile; echo $2`
-{ (eval echo "$as_me:$LINENO: \"$ac_compiler --version </dev/null >&5\"") >&5
- (eval $ac_compiler --version </dev/null >&5) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }
-{ (eval echo "$as_me:$LINENO: \"$ac_compiler -v </dev/null >&5\"") >&5
- (eval $ac_compiler -v </dev/null >&5) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }
-{ (eval echo "$as_me:$LINENO: \"$ac_compiler -V </dev/null >&5\"") >&5
- (eval $ac_compiler -V </dev/null >&5) 2>&5
+$as_echo "$as_me:${as_lineno-$LINENO}: checking for C++ compiler version" >&5
+set X $ac_compile
+ac_compiler=$2
+for ac_option in --version -v -V -qversion; do
+ { { ac_try="$ac_compiler $ac_option >&5"
+case "(($ac_try" in
+ *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
+ *) ac_try_echo=$ac_try;;
+esac
+eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\""
+$as_echo "$ac_try_echo"; } >&5
+ (eval "$ac_compiler $ac_option >&5") 2>conftest.err
ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }
+ if test -s conftest.err; then
+ sed '10a\
+... rest of stderr output deleted ...
+ 10q' conftest.err >conftest.er1
+ cat conftest.er1 >&5
+ fi
+ rm -f conftest.er1 conftest.err
+ $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
+ test $ac_status = 0; }
+done
-cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
+cat confdefs.h - <<_ACEOF >conftest.$ac_ext
/* end confdefs.h. */
int
@@ -1930,112 +2977,108 @@ main ()
}
_ACEOF
ac_clean_files_save=$ac_clean_files
-ac_clean_files="$ac_clean_files a.out a.exe b.out"
+ac_clean_files="$ac_clean_files a.out a.out.dSYM a.exe b.out"
# Try to create an executable without -o first, disregard a.out.
# It will help us diagnose broken compilers, and finding out an intuition
# of exeext.
-echo "$as_me:$LINENO: checking for C++ compiler default output file name" >&5
-echo $ECHO_N "checking for C++ compiler default output file name... $ECHO_C" >&6
-ac_link_default=`echo "$ac_link" | sed 's/ -o *conftest[^ ]*//'`
-if { (eval echo "$as_me:$LINENO: \"$ac_link_default\"") >&5
- (eval $ac_link_default) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; then
- # Find the output, starting from the most likely. This scheme is
-# not robust to junk in `.', hence go to wildcards (a.*) only as a last
-# resort.
-
-# Be careful to initialize this variable, since it used to be cached.
-# Otherwise an old cache value of `no' led to `EXEEXT = no' in a Makefile.
-ac_cv_exeext=
-# b.out is created by i960 compilers.
-for ac_file in a_out.exe a.exe conftest.exe a.out conftest a.* conftest.* b.out
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking whether the C++ compiler works" >&5
+$as_echo_n "checking whether the C++ compiler works... " >&6; }
+ac_link_default=`$as_echo "$ac_link" | sed 's/ -o *conftest[^ ]*//'`
+
+# The possible output files:
+ac_files="a.out conftest.exe conftest a.exe a_out.exe b.out conftest.*"
+
+ac_rmfiles=
+for ac_file in $ac_files
+do
+ case $ac_file in
+ *.$ac_ext | *.xcoff | *.tds | *.d | *.pdb | *.xSYM | *.bb | *.bbg | *.map | *.inf | *.dSYM | *.o | *.obj ) ;;
+ * ) ac_rmfiles="$ac_rmfiles $ac_file";;
+ esac
+done
+rm -f $ac_rmfiles
+
+if { { ac_try="$ac_link_default"
+case "(($ac_try" in
+ *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
+ *) ac_try_echo=$ac_try;;
+esac
+eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\""
+$as_echo "$ac_try_echo"; } >&5
+ (eval "$ac_link_default") 2>&5
+ ac_status=$?
+ $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
+ test $ac_status = 0; }; then :
+ # Autoconf-2.13 could set the ac_cv_exeext variable to `no'.
+# So ignore a value of `no', otherwise this would lead to `EXEEXT = no'
+# in a Makefile. We should not override ac_cv_exeext if it was cached,
+# so that the user can short-circuit this test for compilers unknown to
+# Autoconf.
+for ac_file in $ac_files ''
do
test -f "$ac_file" || continue
case $ac_file in
- *.$ac_ext | *.xcoff | *.tds | *.d | *.pdb | *.xSYM | *.bb | *.bbg | *.o | *.obj )
- ;;
- conftest.$ac_ext )
- # This is the source file.
+ *.$ac_ext | *.xcoff | *.tds | *.d | *.pdb | *.xSYM | *.bb | *.bbg | *.map | *.inf | *.dSYM | *.o | *.obj )
;;
[ab].out )
# We found the default executable, but exeext='' is most
# certainly right.
break;;
*.* )
- ac_cv_exeext=`expr "$ac_file" : '[^.]*\(\..*\)'`
- # FIXME: I believe we export ac_cv_exeext for Libtool,
- # but it would be cool to find out if it's true. Does anybody
- # maintain Libtool? --akim.
- export ac_cv_exeext
+ if test "${ac_cv_exeext+set}" = set && test "$ac_cv_exeext" != no;
+ then :; else
+ ac_cv_exeext=`expr "$ac_file" : '[^.]*\(\..*\)'`
+ fi
+ # We set ac_cv_exeext here because the later test for it is not
+ # safe: cross compilers may not add the suffix if given an `-o'
+ # argument, so we may need to know it at that point already.
+ # Even if this section looks crufty: it has the advantage of
+ # actually working.
break;;
* )
break;;
esac
done
+test "$ac_cv_exeext" = no && ac_cv_exeext=
+
else
- echo "$as_me: failed program was:" >&5
+ ac_file=''
+fi
+if test -z "$ac_file"; then :
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
+$as_echo "no" >&6; }
+$as_echo "$as_me: failed program was:" >&5
sed 's/^/| /' conftest.$ac_ext >&5
-{ { echo "$as_me:$LINENO: error: C++ compiler cannot create executables
-See \`config.log' for more details." >&5
-echo "$as_me: error: C++ compiler cannot create executables
-See \`config.log' for more details." >&2;}
- { (exit 77); exit 77; }; }
+{ { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
+$as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
+as_fn_error 77 "C++ compiler cannot create executables
+See \`config.log' for more details" "$LINENO" 5; }
+else
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
+$as_echo "yes" >&6; }
fi
-
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for C++ compiler default output file name" >&5
+$as_echo_n "checking for C++ compiler default output file name... " >&6; }
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_file" >&5
+$as_echo "$ac_file" >&6; }
ac_exeext=$ac_cv_exeext
-echo "$as_me:$LINENO: result: $ac_file" >&5
-echo "${ECHO_T}$ac_file" >&6
-
-# Check the compiler produces executables we can run. If not, either
-# the compiler is broken, or we cross compile.
-echo "$as_me:$LINENO: checking whether the C++ compiler works" >&5
-echo $ECHO_N "checking whether the C++ compiler works... $ECHO_C" >&6
-# FIXME: These cross compiler hacks should be removed for Autoconf 3.0
-# If not cross compiling, check that we can run a simple program.
-if test "$cross_compiling" != yes; then
- if { ac_try='./$ac_file'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
- cross_compiling=no
- else
- if test "$cross_compiling" = maybe; then
- cross_compiling=yes
- else
- { { echo "$as_me:$LINENO: error: cannot run C++ compiled programs.
-If you meant to cross compile, use \`--host'.
-See \`config.log' for more details." >&5
-echo "$as_me: error: cannot run C++ compiled programs.
-If you meant to cross compile, use \`--host'.
-See \`config.log' for more details." >&2;}
- { (exit 1); exit 1; }; }
- fi
- fi
-fi
-echo "$as_me:$LINENO: result: yes" >&5
-echo "${ECHO_T}yes" >&6
-rm -f a.out a.exe conftest$ac_cv_exeext b.out
+rm -f -r a.out a.out.dSYM a.exe conftest$ac_cv_exeext b.out
ac_clean_files=$ac_clean_files_save
-# Check the compiler produces executables we can run. If not, either
-# the compiler is broken, or we cross compile.
-echo "$as_me:$LINENO: checking whether we are cross compiling" >&5
-echo $ECHO_N "checking whether we are cross compiling... $ECHO_C" >&6
-echo "$as_me:$LINENO: result: $cross_compiling" >&5
-echo "${ECHO_T}$cross_compiling" >&6
-
-echo "$as_me:$LINENO: checking for suffix of executables" >&5
-echo $ECHO_N "checking for suffix of executables... $ECHO_C" >&6
-if { (eval echo "$as_me:$LINENO: \"$ac_link\"") >&5
- (eval $ac_link) 2>&5
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for suffix of executables" >&5
+$as_echo_n "checking for suffix of executables... " >&6; }
+if { { ac_try="$ac_link"
+case "(($ac_try" in
+ *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
+ *) ac_try_echo=$ac_try;;
+esac
+eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\""
+$as_echo "$ac_try_echo"; } >&5
+ (eval "$ac_link") 2>&5
ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; then
+ $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
+ test $ac_status = 0; }; then :
# If both `conftest.exe' and `conftest' are `present' (well, observable)
# catch `conftest.exe'. For instance with Cygwin, `ls conftest' will
# work properly (i.e., refer to `conftest.exe'), while it won't with
@@ -2043,38 +3086,90 @@ if { (eval echo "$as_me:$LINENO: \"$ac_link\"") >&5
for ac_file in conftest.exe conftest conftest.*; do
test -f "$ac_file" || continue
case $ac_file in
- *.$ac_ext | *.xcoff | *.tds | *.d | *.pdb | *.xSYM | *.bb | *.bbg | *.o | *.obj ) ;;
+ *.$ac_ext | *.xcoff | *.tds | *.d | *.pdb | *.xSYM | *.bb | *.bbg | *.map | *.inf | *.dSYM | *.o | *.obj ) ;;
*.* ) ac_cv_exeext=`expr "$ac_file" : '[^.]*\(\..*\)'`
- export ac_cv_exeext
break;;
* ) break;;
esac
done
else
- { { echo "$as_me:$LINENO: error: cannot compute suffix of executables: cannot compile and link
-See \`config.log' for more details." >&5
-echo "$as_me: error: cannot compute suffix of executables: cannot compile and link
-See \`config.log' for more details." >&2;}
- { (exit 1); exit 1; }; }
+ { { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
+$as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
+as_fn_error $? "cannot compute suffix of executables: cannot compile and link
+See \`config.log' for more details" "$LINENO" 5; }
fi
-
-rm -f conftest$ac_cv_exeext
-echo "$as_me:$LINENO: result: $ac_cv_exeext" >&5
-echo "${ECHO_T}$ac_cv_exeext" >&6
+rm -f conftest conftest$ac_cv_exeext
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_exeext" >&5
+$as_echo "$ac_cv_exeext" >&6; }
rm -f conftest.$ac_ext
EXEEXT=$ac_cv_exeext
ac_exeext=$EXEEXT
-echo "$as_me:$LINENO: checking for suffix of object files" >&5
-echo $ECHO_N "checking for suffix of object files... $ECHO_C" >&6
-if test "${ac_cv_objext+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
+cat confdefs.h - <<_ACEOF >conftest.$ac_ext
+/* end confdefs.h. */
+#include <stdio.h>
+int
+main ()
+{
+FILE *f = fopen ("conftest.out", "w");
+ return ferror (f) || fclose (f) != 0;
+
+ ;
+ return 0;
+}
_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
+ac_clean_files="$ac_clean_files conftest.out"
+# Check that the compiler produces executables we can run. If not, either
+# the compiler is broken, or we cross compile.
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking whether we are cross compiling" >&5
+$as_echo_n "checking whether we are cross compiling... " >&6; }
+if test "$cross_compiling" != yes; then
+ { { ac_try="$ac_link"
+case "(($ac_try" in
+ *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
+ *) ac_try_echo=$ac_try;;
+esac
+eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\""
+$as_echo "$ac_try_echo"; } >&5
+ (eval "$ac_link") 2>&5
+ ac_status=$?
+ $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
+ test $ac_status = 0; }
+ if { ac_try='./conftest$ac_cv_exeext'
+ { { case "(($ac_try" in
+ *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
+ *) ac_try_echo=$ac_try;;
+esac
+eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\""
+$as_echo "$ac_try_echo"; } >&5
+ (eval "$ac_try") 2>&5
+ ac_status=$?
+ $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
+ test $ac_status = 0; }; }; then
+ cross_compiling=no
+ else
+ if test "$cross_compiling" = maybe; then
+ cross_compiling=yes
+ else
+ { { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
+$as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
+as_fn_error $? "cannot run C++ compiled programs.
+If you meant to cross compile, use \`--host'.
+See \`config.log' for more details" "$LINENO" 5; }
+ fi
+ fi
+fi
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $cross_compiling" >&5
+$as_echo "$cross_compiling" >&6; }
+
+rm -f conftest.$ac_ext conftest$ac_cv_exeext conftest.out
+ac_clean_files=$ac_clean_files_save
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for suffix of object files" >&5
+$as_echo_n "checking for suffix of object files... " >&6; }
+if ${ac_cv_objext+:} false; then :
+ $as_echo_n "(cached) " >&6
+else
+ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
/* end confdefs.h. */
int
@@ -2086,45 +3181,46 @@ main ()
}
_ACEOF
rm -f conftest.o conftest.obj
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; then
- for ac_file in `(ls conftest.o conftest.obj; ls conftest.*) 2>/dev/null`; do
+if { { ac_try="$ac_compile"
+case "(($ac_try" in
+ *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
+ *) ac_try_echo=$ac_try;;
+esac
+eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\""
+$as_echo "$ac_try_echo"; } >&5
+ (eval "$ac_compile") 2>&5
+ ac_status=$?
+ $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
+ test $ac_status = 0; }; then :
+ for ac_file in conftest.o conftest.obj conftest.*; do
+ test -f "$ac_file" || continue;
case $ac_file in
- *.$ac_ext | *.xcoff | *.tds | *.d | *.pdb | *.xSYM | *.bb | *.bbg ) ;;
+ *.$ac_ext | *.xcoff | *.tds | *.d | *.pdb | *.xSYM | *.bb | *.bbg | *.map | *.inf | *.dSYM ) ;;
*) ac_cv_objext=`expr "$ac_file" : '.*\.\(.*\)'`
break;;
esac
done
else
- echo "$as_me: failed program was:" >&5
+ $as_echo "$as_me: failed program was:" >&5
sed 's/^/| /' conftest.$ac_ext >&5
-{ { echo "$as_me:$LINENO: error: cannot compute suffix of object files: cannot compile
-See \`config.log' for more details." >&5
-echo "$as_me: error: cannot compute suffix of object files: cannot compile
-See \`config.log' for more details." >&2;}
- { (exit 1); exit 1; }; }
+{ { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
+$as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
+as_fn_error $? "cannot compute suffix of object files: cannot compile
+See \`config.log' for more details" "$LINENO" 5; }
fi
-
rm -f conftest.$ac_cv_objext conftest.$ac_ext
fi
-echo "$as_me:$LINENO: result: $ac_cv_objext" >&5
-echo "${ECHO_T}$ac_cv_objext" >&6
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_objext" >&5
+$as_echo "$ac_cv_objext" >&6; }
OBJEXT=$ac_cv_objext
ac_objext=$OBJEXT
-echo "$as_me:$LINENO: checking whether we are using the GNU C++ compiler" >&5
-echo $ECHO_N "checking whether we are using the GNU C++ compiler... $ECHO_C" >&6
-if test "${ac_cv_cxx_compiler_gnu+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking whether we are using the GNU C++ compiler" >&5
+$as_echo_n "checking whether we are using the GNU C++ compiler... " >&6; }
+if ${ac_cv_cxx_compiler_gnu+:} false; then :
+ $as_echo_n "(cached) " >&6
else
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
+ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
/* end confdefs.h. */
int
@@ -2138,55 +3234,34 @@ main ()
return 0;
}
_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_cxx_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
+if ac_fn_cxx_try_compile "$LINENO"; then :
ac_compiler_gnu=yes
else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-ac_compiler_gnu=no
+ ac_compiler_gnu=no
fi
-rm -f conftest.err conftest.$ac_objext conftest.$ac_ext
+rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
ac_cv_cxx_compiler_gnu=$ac_compiler_gnu
fi
-echo "$as_me:$LINENO: result: $ac_cv_cxx_compiler_gnu" >&5
-echo "${ECHO_T}$ac_cv_cxx_compiler_gnu" >&6
-GXX=`test $ac_compiler_gnu = yes && echo yes`
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_cxx_compiler_gnu" >&5
+$as_echo "$ac_cv_cxx_compiler_gnu" >&6; }
+if test $ac_compiler_gnu = yes; then
+ GXX=yes
+else
+ GXX=
+fi
ac_test_CXXFLAGS=${CXXFLAGS+set}
ac_save_CXXFLAGS=$CXXFLAGS
-CXXFLAGS="-g"
-echo "$as_me:$LINENO: checking whether $CXX accepts -g" >&5
-echo $ECHO_N "checking whether $CXX accepts -g... $ECHO_C" >&6
-if test "${ac_cv_prog_cxx_g+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking whether $CXX accepts -g" >&5
+$as_echo_n "checking whether $CXX accepts -g... " >&6; }
+if ${ac_cv_prog_cxx_g+:} false; then :
+ $as_echo_n "(cached) " >&6
+else
+ ac_save_cxx_werror_flag=$ac_cxx_werror_flag
+ ac_cxx_werror_flag=yes
+ ac_cv_prog_cxx_g=no
+ CXXFLAGS="-g"
+ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
/* end confdefs.h. */
int
@@ -2197,160 +3272,64 @@ main ()
return 0;
}
_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_cxx_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
+if ac_fn_cxx_try_compile "$LINENO"; then :
ac_cv_prog_cxx_g=yes
else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
+ CXXFLAGS=""
+ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
+/* end confdefs.h. */
-ac_cv_prog_cxx_g=no
-fi
-rm -f conftest.err conftest.$ac_objext conftest.$ac_ext
-fi
-echo "$as_me:$LINENO: result: $ac_cv_prog_cxx_g" >&5
-echo "${ECHO_T}$ac_cv_prog_cxx_g" >&6
-if test "$ac_test_CXXFLAGS" = set; then
- CXXFLAGS=$ac_save_CXXFLAGS
-elif test $ac_cv_prog_cxx_g = yes; then
- if test "$GXX" = yes; then
- CXXFLAGS="-g -O2"
- else
- CXXFLAGS="-g"
- fi
-else
- if test "$GXX" = yes; then
- CXXFLAGS="-O2"
- else
- CXXFLAGS=
- fi
-fi
-for ac_declaration in \
- '' \
- 'extern "C" void std::exit (int) throw (); using std::exit;' \
- 'extern "C" void std::exit (int); using std::exit;' \
- 'extern "C" void exit (int) throw ();' \
- 'extern "C" void exit (int);' \
- 'void exit (int);'
-do
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-$ac_declaration
-#include <stdlib.h>
int
main ()
{
-exit (42);
+
;
return 0;
}
_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_cxx_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
- :
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
+if ac_fn_cxx_try_compile "$LINENO"; then :
-continue
-fi
-rm -f conftest.err conftest.$ac_objext conftest.$ac_ext
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
+else
+ ac_cxx_werror_flag=$ac_save_cxx_werror_flag
+ CXXFLAGS="-g"
+ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
/* end confdefs.h. */
-$ac_declaration
+
int
main ()
{
-exit (42);
+
;
return 0;
}
_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_cxx_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
- break
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
+if ac_fn_cxx_try_compile "$LINENO"; then :
+ ac_cv_prog_cxx_g=yes
fi
-rm -f conftest.err conftest.$ac_objext conftest.$ac_ext
-done
-rm -f conftest*
-if test -n "$ac_declaration"; then
- echo '#ifdef __cplusplus' >>confdefs.h
- echo $ac_declaration >>confdefs.h
- echo '#endif' >>confdefs.h
+rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
+fi
+rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
+fi
+rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
+ ac_cxx_werror_flag=$ac_save_cxx_werror_flag
+fi
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_prog_cxx_g" >&5
+$as_echo "$ac_cv_prog_cxx_g" >&6; }
+if test "$ac_test_CXXFLAGS" = set; then
+ CXXFLAGS=$ac_save_CXXFLAGS
+elif test $ac_cv_prog_cxx_g = yes; then
+ if test "$GXX" = yes; then
+ CXXFLAGS="-g -O2"
+ else
+ CXXFLAGS="-g"
+ fi
+else
+ if test "$GXX" = yes; then
+ CXXFLAGS="-O2"
+ else
+ CXXFLAGS=
+ fi
fi
-
ac_ext=c
ac_cpp='$CPP $CPPFLAGS'
ac_compile='$CC -c $CFLAGS $CPPFLAGS conftest.$ac_ext >&5'
@@ -2358,60 +3337,59 @@ ac_link='$CC -o conftest$ac_exeext $CFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $
ac_compiler_gnu=$ac_cv_c_compiler_gnu
DEPDIR="${am__leading_dot}deps"
- ac_config_commands="$ac_config_commands depfiles"
+ac_config_commands="$ac_config_commands depfiles"
am_make=${MAKE-make}
cat > confinc << 'END'
am__doit:
- @echo done
+ @echo this is the am__doit target
.PHONY: am__doit
END
# If we don't find an include directive, just comment out the code.
-echo "$as_me:$LINENO: checking for style of include used by $am_make" >&5
-echo $ECHO_N "checking for style of include used by $am_make... $ECHO_C" >&6
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for style of include used by $am_make" >&5
+$as_echo_n "checking for style of include used by $am_make... " >&6; }
am__include="#"
am__quote=
_am_result=none
# First try GNU make style include.
echo "include confinc" > confmf
-# We grep out `Entering directory' and `Leaving directory'
-# messages which can occur if `w' ends up in MAKEFLAGS.
-# In particular we don't look at `^make:' because GNU make might
-# be invoked under some other name (usually "gmake"), in which
-# case it prints its new name instead of `make'.
-if test "`$am_make -s -f confmf 2> /dev/null | grep -v 'ing directory'`" = "done"; then
- am__include=include
- am__quote=
- _am_result=GNU
-fi
+# Ignore all kinds of additional output from 'make'.
+case `$am_make -s -f confmf 2> /dev/null` in #(
+*the\ am__doit\ target*)
+ am__include=include
+ am__quote=
+ _am_result=GNU
+ ;;
+esac
# Now try BSD make style include.
if test "$am__include" = "#"; then
echo '.include "confinc"' > confmf
- if test "`$am_make -s -f confmf 2> /dev/null`" = "done"; then
- am__include=.include
- am__quote="\""
- _am_result=BSD
- fi
+ case `$am_make -s -f confmf 2> /dev/null` in #(
+ *the\ am__doit\ target*)
+ am__include=.include
+ am__quote="\""
+ _am_result=BSD
+ ;;
+ esac
fi
-echo "$as_me:$LINENO: result: $_am_result" >&5
-echo "${ECHO_T}$_am_result" >&6
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $_am_result" >&5
+$as_echo "$_am_result" >&6; }
rm -f confinc confmf
-# Check whether --enable-dependency-tracking or --disable-dependency-tracking was given.
-if test "${enable_dependency_tracking+set}" = set; then
- enableval="$enable_dependency_tracking"
+# Check whether --enable-dependency-tracking was given.
+if test "${enable_dependency_tracking+set}" = set; then :
+ enableval=$enable_dependency_tracking;
+fi
-fi;
if test "x$enable_dependency_tracking" != xno; then
am_depcomp="$ac_aux_dir/depcomp"
AMDEPBACKSLASH='\'
+ am__nodep='_no'
fi
-
-
-if test "x$enable_dependency_tracking" != xno; then
+ if test "x$enable_dependency_tracking" != xno; then
AMDEP_TRUE=
AMDEP_FALSE='#'
else
@@ -2421,20 +3399,20 @@ fi
-
depcc="$CXX" am_compiler_list=
-echo "$as_me:$LINENO: checking dependency style of $depcc" >&5
-echo $ECHO_N "checking dependency style of $depcc... $ECHO_C" >&6
-if test "${am_cv_CXX_dependencies_compiler_type+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking dependency style of $depcc" >&5
+$as_echo_n "checking dependency style of $depcc... " >&6; }
+if ${am_cv_CXX_dependencies_compiler_type+:} false; then :
+ $as_echo_n "(cached) " >&6
else
if test -z "$AMDEP_TRUE" && test -f "$am_depcomp"; then
# We make a subdir and do the tests there. Otherwise we can end up
# making bogus files that we don't know about and never remove. For
# instance it was reported that on HP-UX the gcc test will end up
- # making a dummy file named `D' -- because `-MD' means `put the output
- # in D'.
+ # making a dummy file named 'D' -- because '-MD' means "put the output
+ # in D".
+ rm -rf conftest.dir
mkdir conftest.dir
# Copy depcomp to subdir because otherwise we won't find it if we're
# using a relative directory.
@@ -2452,6 +3430,11 @@ else
if test "$am_compiler_list" = ""; then
am_compiler_list=`sed -n 's/^#*\([a-zA-Z0-9]*\))$/\1/p' < ./depcomp`
fi
+ am__universal=false
+ case " $depcc " in #(
+ *\ -arch\ *\ -arch\ *) am__universal=true ;;
+ esac
+
for depmode in $am_compiler_list; do
# Setup a source with many dependencies, because some compilers
# like to wrap large dependency lists on column 80 (with \), and
@@ -2463,34 +3446,49 @@ else
: > sub/conftest.c
for i in 1 2 3 4 5 6; do
echo '#include "conftst'$i'.h"' >> sub/conftest.c
- # Using `: > sub/conftst$i.h' creates only sub/conftst1.h with
- # Solaris 8's {/usr,}/bin/sh.
- touch sub/conftst$i.h
+ # Using ": > sub/conftst$i.h" creates only sub/conftst1.h with
+ # Solaris 10 /bin/sh.
+ echo '/* dummy */' > sub/conftst$i.h
done
echo "${am__include} ${am__quote}sub/conftest.Po${am__quote}" > confmf
+ # We check with '-c' and '-o' for the sake of the "dashmstdout"
+ # mode. It turns out that the SunPro C++ compiler does not properly
+ # handle '-M -o', and we need to detect this. Also, some Intel
+ # versions had trouble with output in subdirs.
+ am__obj=sub/conftest.${OBJEXT-o}
+ am__minus_obj="-o $am__obj"
case $depmode in
+ gcc)
+ # This depmode causes a compiler race in universal mode.
+ test "$am__universal" = false || continue
+ ;;
nosideeffect)
- # after this tag, mechanisms are not by side-effect, so they'll
- # only be used when explicitly requested
+ # After this tag, mechanisms are not by side-effect, so they'll
+ # only be used when explicitly requested.
if test "x$enable_dependency_tracking" = xyes; then
continue
else
break
fi
;;
+ msvc7 | msvc7msys | msvisualcpp | msvcmsys)
+ # This compiler won't grok '-c -o', but also, the minuso test has
+ # not run yet. These depmodes are late enough in the game, and
+ # so weak that their functioning should not be impacted.
+ am__obj=conftest.${OBJEXT-o}
+ am__minus_obj=
+ ;;
none) break ;;
esac
- # We check with `-c' and `-o' for the sake of the "dashmstdout"
- # mode. It turns out that the SunPro C++ compiler does not properly
- # handle `-M -o', and we need to detect this.
if depmode=$depmode \
- source=sub/conftest.c object=sub/conftest.${OBJEXT-o} \
+ source=sub/conftest.c object=$am__obj \
depfile=sub/conftest.Po tmpdepfile=sub/conftest.TPo \
- $SHELL ./depcomp $depcc -c -o sub/conftest.${OBJEXT-o} sub/conftest.c \
+ $SHELL ./depcomp $depcc -c $am__minus_obj sub/conftest.c \
>/dev/null 2>conftest.err &&
+ grep sub/conftst1.h sub/conftest.Po > /dev/null 2>&1 &&
grep sub/conftst6.h sub/conftest.Po > /dev/null 2>&1 &&
- grep sub/conftest.${OBJEXT-o} sub/conftest.Po > /dev/null 2>&1 &&
+ grep $am__obj sub/conftest.Po > /dev/null 2>&1 &&
${MAKE-make} -s -f confmf > /dev/null 2>&1; then
# icc doesn't choke on unknown options, it will just issue warnings
# or remarks (even with -Werror). So we grep stderr for any message
@@ -2514,13 +3512,11 @@ else
fi
fi
-echo "$as_me:$LINENO: result: $am_cv_CXX_dependencies_compiler_type" >&5
-echo "${ECHO_T}$am_cv_CXX_dependencies_compiler_type" >&6
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $am_cv_CXX_dependencies_compiler_type" >&5
+$as_echo "$am_cv_CXX_dependencies_compiler_type" >&6; }
CXXDEPMODE=depmode=$am_cv_CXX_dependencies_compiler_type
-
-
-if
+ if
test "x$enable_dependency_tracking" != xno \
&& test "$am_cv_CXX_dependencies_compiler_type" = gcc3; then
am__fastdepCXX_TRUE=
@@ -2531,7 +3527,7 @@ else
fi
-ac_ext=cc
+ac_ext=cpp
ac_cpp='$CXXCPP $CPPFLAGS'
ac_compile='$CXX -c $CXXFLAGS $CPPFLAGS conftest.$ac_ext >&5'
ac_link='$CXX -o conftest$ac_exeext $CXXFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5'
@@ -2541,16 +3537,176 @@ ac_compiler_gnu=$ac_cv_cxx_compiler_gnu
# AC_LANG([C])
+if test -n "$ac_tool_prefix"; then
+ for ac_prog in ar lib "link -lib"
+ do
+ # Extract the first word of "$ac_tool_prefix$ac_prog", so it can be a program name with args.
+set dummy $ac_tool_prefix$ac_prog; ac_word=$2
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
+$as_echo_n "checking for $ac_word... " >&6; }
+if ${ac_cv_prog_AR+:} false; then :
+ $as_echo_n "(cached) " >&6
+else
+ if test -n "$AR"; then
+ ac_cv_prog_AR="$AR" # Let the user override the test.
+else
+as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
+for as_dir in $PATH
+do
+ IFS=$as_save_IFS
+ test -z "$as_dir" && as_dir=.
+ for ac_exec_ext in '' $ac_executable_extensions; do
+ if as_fn_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
+ ac_cv_prog_AR="$ac_tool_prefix$ac_prog"
+ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
+ break 2
+ fi
+done
+ done
+IFS=$as_save_IFS
+
+fi
+fi
+AR=$ac_cv_prog_AR
+if test -n "$AR"; then
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $AR" >&5
+$as_echo "$AR" >&6; }
+else
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
+$as_echo "no" >&6; }
+fi
+
+
+ test -n "$AR" && break
+ done
+fi
+if test -z "$AR"; then
+ ac_ct_AR=$AR
+ for ac_prog in ar lib "link -lib"
+do
+ # Extract the first word of "$ac_prog", so it can be a program name with args.
+set dummy $ac_prog; ac_word=$2
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
+$as_echo_n "checking for $ac_word... " >&6; }
+if ${ac_cv_prog_ac_ct_AR+:} false; then :
+ $as_echo_n "(cached) " >&6
+else
+ if test -n "$ac_ct_AR"; then
+ ac_cv_prog_ac_ct_AR="$ac_ct_AR" # Let the user override the test.
+else
+as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
+for as_dir in $PATH
+do
+ IFS=$as_save_IFS
+ test -z "$as_dir" && as_dir=.
+ for ac_exec_ext in '' $ac_executable_extensions; do
+ if as_fn_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
+ ac_cv_prog_ac_ct_AR="$ac_prog"
+ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
+ break 2
+ fi
+done
+ done
+IFS=$as_save_IFS
+
+fi
+fi
+ac_ct_AR=$ac_cv_prog_ac_ct_AR
+if test -n "$ac_ct_AR"; then
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_ct_AR" >&5
+$as_echo "$ac_ct_AR" >&6; }
+else
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
+$as_echo "no" >&6; }
+fi
+
+
+ test -n "$ac_ct_AR" && break
+done
+
+ if test "x$ac_ct_AR" = x; then
+ AR="false"
+ else
+ case $cross_compiling:$ac_tool_warned in
+yes:)
+{ $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: using cross tools not prefixed with host triplet" >&5
+$as_echo "$as_me: WARNING: using cross tools not prefixed with host triplet" >&2;}
+ac_tool_warned=yes ;;
+esac
+ AR=$ac_ct_AR
+ fi
+fi
+
+: ${AR=ar}
+
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking the archiver ($AR) interface" >&5
+$as_echo_n "checking the archiver ($AR) interface... " >&6; }
+if ${am_cv_ar_interface+:} false; then :
+ $as_echo_n "(cached) " >&6
+else
+ am_cv_ar_interface=ar
+ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
+/* end confdefs.h. */
+int some_variable = 0;
+_ACEOF
+if ac_fn_cxx_try_compile "$LINENO"; then :
+ am_ar_try='$AR cru libconftest.a conftest.$ac_objext >&5'
+ { { eval echo "\"\$as_me\":${as_lineno-$LINENO}: \"$am_ar_try\""; } >&5
+ (eval $am_ar_try) 2>&5
+ ac_status=$?
+ $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
+ test $ac_status = 0; }
+ if test "$ac_status" -eq 0; then
+ am_cv_ar_interface=ar
+ else
+ am_ar_try='$AR -NOLOGO -OUT:conftest.lib conftest.$ac_objext >&5'
+ { { eval echo "\"\$as_me\":${as_lineno-$LINENO}: \"$am_ar_try\""; } >&5
+ (eval $am_ar_try) 2>&5
+ ac_status=$?
+ $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
+ test $ac_status = 0; }
+ if test "$ac_status" -eq 0; then
+ am_cv_ar_interface=lib
+ else
+ am_cv_ar_interface=unknown
+ fi
+ fi
+ rm -f conftest.lib libconftest.a
+
+fi
+rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
+
+fi
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $am_cv_ar_interface" >&5
+$as_echo "$am_cv_ar_interface" >&6; }
+
+case $am_cv_ar_interface in
+ar)
+ ;;
+lib)
+ # Microsoft lib, so override with the ar-lib wrapper script.
+ # FIXME: It is wrong to rewrite AR.
+ # But if we don't then we get into trouble of one sort or another.
+ # A longer-term fix would be to have automake use am__AR in this case,
+ # and then we could set am__AR="$am_aux_dir/ar-lib \$(AR)" or something
+ # similar.
+ AR="$am_aux_dir/ar-lib $AR"
+ ;;
+unknown)
+ as_fn_error $? "could not determine $AR interface" "$LINENO" 5
+ ;;
+esac
+
# Checks for programs.
for ac_prog in gawk mawk nawk awk
do
# Extract the first word of "$ac_prog", so it can be a program name with args.
set dummy $ac_prog; ac_word=$2
-echo "$as_me:$LINENO: checking for $ac_word" >&5
-echo $ECHO_N "checking for $ac_word... $ECHO_C" >&6
-if test "${ac_cv_prog_AWK+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
+$as_echo_n "checking for $ac_word... " >&6; }
+if ${ac_cv_prog_AWK+:} false; then :
+ $as_echo_n "(cached) " >&6
else
if test -n "$AWK"; then
ac_cv_prog_AWK="$AWK" # Let the user override the test.
@@ -2560,43 +3716,49 @@ for as_dir in $PATH
do
IFS=$as_save_IFS
test -z "$as_dir" && as_dir=.
- for ac_exec_ext in '' $ac_executable_extensions; do
- if $as_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
+ for ac_exec_ext in '' $ac_executable_extensions; do
+ if as_fn_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
ac_cv_prog_AWK="$ac_prog"
- echo "$as_me:$LINENO: found $as_dir/$ac_word$ac_exec_ext" >&5
+ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
break 2
fi
done
-done
+ done
+IFS=$as_save_IFS
fi
fi
AWK=$ac_cv_prog_AWK
if test -n "$AWK"; then
- echo "$as_me:$LINENO: result: $AWK" >&5
-echo "${ECHO_T}$AWK" >&6
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $AWK" >&5
+$as_echo "$AWK" >&6; }
else
- echo "$as_me:$LINENO: result: no" >&5
-echo "${ECHO_T}no" >&6
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
+$as_echo "no" >&6; }
fi
+
test -n "$AWK" && break
done
-ac_ext=cc
+ac_ext=cpp
ac_cpp='$CXXCPP $CPPFLAGS'
ac_compile='$CXX -c $CXXFLAGS $CPPFLAGS conftest.$ac_ext >&5'
ac_link='$CXX -o conftest$ac_exeext $CXXFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5'
ac_compiler_gnu=$ac_cv_cxx_compiler_gnu
-if test -n "$ac_tool_prefix"; then
- for ac_prog in $CCC g++ c++ gpp aCC CC cxx cc++ cl FCC KCC RCC xlC_r xlC
+if test -z "$CXX"; then
+ if test -n "$CCC"; then
+ CXX=$CCC
+ else
+ if test -n "$ac_tool_prefix"; then
+ for ac_prog in g++ c++ gpp aCC CC cxx cc++ cl.exe FCC KCC RCC xlC_r xlC
do
# Extract the first word of "$ac_tool_prefix$ac_prog", so it can be a program name with args.
set dummy $ac_tool_prefix$ac_prog; ac_word=$2
-echo "$as_me:$LINENO: checking for $ac_word" >&5
-echo $ECHO_N "checking for $ac_word... $ECHO_C" >&6
-if test "${ac_cv_prog_CXX+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
+$as_echo_n "checking for $ac_word... " >&6; }
+if ${ac_cv_prog_CXX+:} false; then :
+ $as_echo_n "(cached) " >&6
else
if test -n "$CXX"; then
ac_cv_prog_CXX="$CXX" # Let the user override the test.
@@ -2606,39 +3768,41 @@ for as_dir in $PATH
do
IFS=$as_save_IFS
test -z "$as_dir" && as_dir=.
- for ac_exec_ext in '' $ac_executable_extensions; do
- if $as_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
+ for ac_exec_ext in '' $ac_executable_extensions; do
+ if as_fn_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
ac_cv_prog_CXX="$ac_tool_prefix$ac_prog"
- echo "$as_me:$LINENO: found $as_dir/$ac_word$ac_exec_ext" >&5
+ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
break 2
fi
done
-done
+ done
+IFS=$as_save_IFS
fi
fi
CXX=$ac_cv_prog_CXX
if test -n "$CXX"; then
- echo "$as_me:$LINENO: result: $CXX" >&5
-echo "${ECHO_T}$CXX" >&6
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $CXX" >&5
+$as_echo "$CXX" >&6; }
else
- echo "$as_me:$LINENO: result: no" >&5
-echo "${ECHO_T}no" >&6
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
+$as_echo "no" >&6; }
fi
+
test -n "$CXX" && break
done
fi
if test -z "$CXX"; then
ac_ct_CXX=$CXX
- for ac_prog in $CCC g++ c++ gpp aCC CC cxx cc++ cl FCC KCC RCC xlC_r xlC
+ for ac_prog in g++ c++ gpp aCC CC cxx cc++ cl.exe FCC KCC RCC xlC_r xlC
do
# Extract the first word of "$ac_prog", so it can be a program name with args.
set dummy $ac_prog; ac_word=$2
-echo "$as_me:$LINENO: checking for $ac_word" >&5
-echo $ECHO_N "checking for $ac_word... $ECHO_C" >&6
-if test "${ac_cv_prog_ac_ct_CXX+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
+$as_echo_n "checking for $ac_word... " >&6; }
+if ${ac_cv_prog_ac_ct_CXX+:} false; then :
+ $as_echo_n "(cached) " >&6
else
if test -n "$ac_ct_CXX"; then
ac_cv_prog_ac_ct_CXX="$ac_ct_CXX" # Let the user override the test.
@@ -2648,64 +3812,77 @@ for as_dir in $PATH
do
IFS=$as_save_IFS
test -z "$as_dir" && as_dir=.
- for ac_exec_ext in '' $ac_executable_extensions; do
- if $as_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
+ for ac_exec_ext in '' $ac_executable_extensions; do
+ if as_fn_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
ac_cv_prog_ac_ct_CXX="$ac_prog"
- echo "$as_me:$LINENO: found $as_dir/$ac_word$ac_exec_ext" >&5
+ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
break 2
fi
done
-done
+ done
+IFS=$as_save_IFS
fi
fi
ac_ct_CXX=$ac_cv_prog_ac_ct_CXX
if test -n "$ac_ct_CXX"; then
- echo "$as_me:$LINENO: result: $ac_ct_CXX" >&5
-echo "${ECHO_T}$ac_ct_CXX" >&6
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_ct_CXX" >&5
+$as_echo "$ac_ct_CXX" >&6; }
else
- echo "$as_me:$LINENO: result: no" >&5
-echo "${ECHO_T}no" >&6
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
+$as_echo "no" >&6; }
fi
+
test -n "$ac_ct_CXX" && break
done
-test -n "$ac_ct_CXX" || ac_ct_CXX="g++"
- CXX=$ac_ct_CXX
+ if test "x$ac_ct_CXX" = x; then
+ CXX="g++"
+ else
+ case $cross_compiling:$ac_tool_warned in
+yes:)
+{ $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: using cross tools not prefixed with host triplet" >&5
+$as_echo "$as_me: WARNING: using cross tools not prefixed with host triplet" >&2;}
+ac_tool_warned=yes ;;
+esac
+ CXX=$ac_ct_CXX
+ fi
fi
-
+ fi
+fi
# Provide some information about the compiler.
-echo "$as_me:$LINENO:" \
- "checking for C++ compiler version" >&5
-ac_compiler=`set X $ac_compile; echo $2`
-{ (eval echo "$as_me:$LINENO: \"$ac_compiler --version </dev/null >&5\"") >&5
- (eval $ac_compiler --version </dev/null >&5) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }
-{ (eval echo "$as_me:$LINENO: \"$ac_compiler -v </dev/null >&5\"") >&5
- (eval $ac_compiler -v </dev/null >&5) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }
-{ (eval echo "$as_me:$LINENO: \"$ac_compiler -V </dev/null >&5\"") >&5
- (eval $ac_compiler -V </dev/null >&5) 2>&5
+$as_echo "$as_me:${as_lineno-$LINENO}: checking for C++ compiler version" >&5
+set X $ac_compile
+ac_compiler=$2
+for ac_option in --version -v -V -qversion; do
+ { { ac_try="$ac_compiler $ac_option >&5"
+case "(($ac_try" in
+ *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
+ *) ac_try_echo=$ac_try;;
+esac
+eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\""
+$as_echo "$ac_try_echo"; } >&5
+ (eval "$ac_compiler $ac_option >&5") 2>conftest.err
ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }
+ if test -s conftest.err; then
+ sed '10a\
+... rest of stderr output deleted ...
+ 10q' conftest.err >conftest.er1
+ cat conftest.er1 >&5
+ fi
+ rm -f conftest.er1 conftest.err
+ $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
+ test $ac_status = 0; }
+done
-echo "$as_me:$LINENO: checking whether we are using the GNU C++ compiler" >&5
-echo $ECHO_N "checking whether we are using the GNU C++ compiler... $ECHO_C" >&6
-if test "${ac_cv_cxx_compiler_gnu+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking whether we are using the GNU C++ compiler" >&5
+$as_echo_n "checking whether we are using the GNU C++ compiler... " >&6; }
+if ${ac_cv_cxx_compiler_gnu+:} false; then :
+ $as_echo_n "(cached) " >&6
else
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
+ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
/* end confdefs.h. */
int
@@ -2719,55 +3896,34 @@ main ()
return 0;
}
_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_cxx_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
+if ac_fn_cxx_try_compile "$LINENO"; then :
ac_compiler_gnu=yes
else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-ac_compiler_gnu=no
+ ac_compiler_gnu=no
fi
-rm -f conftest.err conftest.$ac_objext conftest.$ac_ext
+rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
ac_cv_cxx_compiler_gnu=$ac_compiler_gnu
fi
-echo "$as_me:$LINENO: result: $ac_cv_cxx_compiler_gnu" >&5
-echo "${ECHO_T}$ac_cv_cxx_compiler_gnu" >&6
-GXX=`test $ac_compiler_gnu = yes && echo yes`
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_cxx_compiler_gnu" >&5
+$as_echo "$ac_cv_cxx_compiler_gnu" >&6; }
+if test $ac_compiler_gnu = yes; then
+ GXX=yes
+else
+ GXX=
+fi
ac_test_CXXFLAGS=${CXXFLAGS+set}
ac_save_CXXFLAGS=$CXXFLAGS
-CXXFLAGS="-g"
-echo "$as_me:$LINENO: checking whether $CXX accepts -g" >&5
-echo $ECHO_N "checking whether $CXX accepts -g... $ECHO_C" >&6
-if test "${ac_cv_prog_cxx_g+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking whether $CXX accepts -g" >&5
+$as_echo_n "checking whether $CXX accepts -g... " >&6; }
+if ${ac_cv_prog_cxx_g+:} false; then :
+ $as_echo_n "(cached) " >&6
+else
+ ac_save_cxx_werror_flag=$ac_cxx_werror_flag
+ ac_cxx_werror_flag=yes
+ ac_cv_prog_cxx_g=no
+ CXXFLAGS="-g"
+ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
/* end confdefs.h. */
int
@@ -2778,161 +3934,65 @@ main ()
return 0;
}
_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_cxx_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
+if ac_fn_cxx_try_compile "$LINENO"; then :
ac_cv_prog_cxx_g=yes
else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-ac_cv_prog_cxx_g=no
-fi
-rm -f conftest.err conftest.$ac_objext conftest.$ac_ext
-fi
-echo "$as_me:$LINENO: result: $ac_cv_prog_cxx_g" >&5
-echo "${ECHO_T}$ac_cv_prog_cxx_g" >&6
-if test "$ac_test_CXXFLAGS" = set; then
- CXXFLAGS=$ac_save_CXXFLAGS
-elif test $ac_cv_prog_cxx_g = yes; then
- if test "$GXX" = yes; then
- CXXFLAGS="-g -O2"
- else
- CXXFLAGS="-g"
- fi
-else
- if test "$GXX" = yes; then
- CXXFLAGS="-O2"
- else
- CXXFLAGS=
- fi
-fi
-for ac_declaration in \
- '' \
- 'extern "C" void std::exit (int) throw (); using std::exit;' \
- 'extern "C" void std::exit (int); using std::exit;' \
- 'extern "C" void exit (int) throw ();' \
- 'extern "C" void exit (int);' \
- 'void exit (int);'
-do
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
+ CXXFLAGS=""
+ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
/* end confdefs.h. */
-$ac_declaration
-#include <stdlib.h>
+
int
main ()
{
-exit (42);
+
;
return 0;
}
_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_cxx_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
- :
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
+if ac_fn_cxx_try_compile "$LINENO"; then :
-continue
-fi
-rm -f conftest.err conftest.$ac_objext conftest.$ac_ext
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
+else
+ ac_cxx_werror_flag=$ac_save_cxx_werror_flag
+ CXXFLAGS="-g"
+ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
/* end confdefs.h. */
-$ac_declaration
+
int
main ()
{
-exit (42);
+
;
return 0;
}
_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_cxx_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
- break
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
+if ac_fn_cxx_try_compile "$LINENO"; then :
+ ac_cv_prog_cxx_g=yes
fi
-rm -f conftest.err conftest.$ac_objext conftest.$ac_ext
-done
-rm -f conftest*
-if test -n "$ac_declaration"; then
- echo '#ifdef __cplusplus' >>confdefs.h
- echo $ac_declaration >>confdefs.h
- echo '#endif' >>confdefs.h
+rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
fi
-
-ac_ext=cc
+rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
+fi
+rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
+ ac_cxx_werror_flag=$ac_save_cxx_werror_flag
+fi
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_prog_cxx_g" >&5
+$as_echo "$ac_cv_prog_cxx_g" >&6; }
+if test "$ac_test_CXXFLAGS" = set; then
+ CXXFLAGS=$ac_save_CXXFLAGS
+elif test $ac_cv_prog_cxx_g = yes; then
+ if test "$GXX" = yes; then
+ CXXFLAGS="-g -O2"
+ else
+ CXXFLAGS="-g"
+ fi
+else
+ if test "$GXX" = yes; then
+ CXXFLAGS="-O2"
+ else
+ CXXFLAGS=
+ fi
+fi
+ac_ext=cpp
ac_cpp='$CXXCPP $CPPFLAGS'
ac_compile='$CXX -c $CXXFLAGS $CPPFLAGS conftest.$ac_ext >&5'
ac_link='$CXX -o conftest$ac_exeext $CXXFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5'
@@ -2940,17 +4000,18 @@ ac_compiler_gnu=$ac_cv_cxx_compiler_gnu
depcc="$CXX" am_compiler_list=
-echo "$as_me:$LINENO: checking dependency style of $depcc" >&5
-echo $ECHO_N "checking dependency style of $depcc... $ECHO_C" >&6
-if test "${am_cv_CXX_dependencies_compiler_type+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking dependency style of $depcc" >&5
+$as_echo_n "checking dependency style of $depcc... " >&6; }
+if ${am_cv_CXX_dependencies_compiler_type+:} false; then :
+ $as_echo_n "(cached) " >&6
else
if test -z "$AMDEP_TRUE" && test -f "$am_depcomp"; then
# We make a subdir and do the tests there. Otherwise we can end up
# making bogus files that we don't know about and never remove. For
# instance it was reported that on HP-UX the gcc test will end up
- # making a dummy file named `D' -- because `-MD' means `put the output
- # in D'.
+ # making a dummy file named 'D' -- because '-MD' means "put the output
+ # in D".
+ rm -rf conftest.dir
mkdir conftest.dir
# Copy depcomp to subdir because otherwise we won't find it if we're
# using a relative directory.
@@ -2968,6 +4029,11 @@ else
if test "$am_compiler_list" = ""; then
am_compiler_list=`sed -n 's/^#*\([a-zA-Z0-9]*\))$/\1/p' < ./depcomp`
fi
+ am__universal=false
+ case " $depcc " in #(
+ *\ -arch\ *\ -arch\ *) am__universal=true ;;
+ esac
+
for depmode in $am_compiler_list; do
# Setup a source with many dependencies, because some compilers
# like to wrap large dependency lists on column 80 (with \), and
@@ -2979,34 +4045,49 @@ else
: > sub/conftest.c
for i in 1 2 3 4 5 6; do
echo '#include "conftst'$i'.h"' >> sub/conftest.c
- # Using `: > sub/conftst$i.h' creates only sub/conftst1.h with
- # Solaris 8's {/usr,}/bin/sh.
- touch sub/conftst$i.h
+ # Using ": > sub/conftst$i.h" creates only sub/conftst1.h with
+ # Solaris 10 /bin/sh.
+ echo '/* dummy */' > sub/conftst$i.h
done
echo "${am__include} ${am__quote}sub/conftest.Po${am__quote}" > confmf
+ # We check with '-c' and '-o' for the sake of the "dashmstdout"
+ # mode. It turns out that the SunPro C++ compiler does not properly
+ # handle '-M -o', and we need to detect this. Also, some Intel
+ # versions had trouble with output in subdirs.
+ am__obj=sub/conftest.${OBJEXT-o}
+ am__minus_obj="-o $am__obj"
case $depmode in
+ gcc)
+ # This depmode causes a compiler race in universal mode.
+ test "$am__universal" = false || continue
+ ;;
nosideeffect)
- # after this tag, mechanisms are not by side-effect, so they'll
- # only be used when explicitly requested
+ # After this tag, mechanisms are not by side-effect, so they'll
+ # only be used when explicitly requested.
if test "x$enable_dependency_tracking" = xyes; then
continue
else
break
fi
;;
+ msvc7 | msvc7msys | msvisualcpp | msvcmsys)
+ # This compiler won't grok '-c -o', but also, the minuso test has
+ # not run yet. These depmodes are late enough in the game, and
+ # so weak that their functioning should not be impacted.
+ am__obj=conftest.${OBJEXT-o}
+ am__minus_obj=
+ ;;
none) break ;;
esac
- # We check with `-c' and `-o' for the sake of the "dashmstdout"
- # mode. It turns out that the SunPro C++ compiler does not properly
- # handle `-M -o', and we need to detect this.
if depmode=$depmode \
- source=sub/conftest.c object=sub/conftest.${OBJEXT-o} \
+ source=sub/conftest.c object=$am__obj \
depfile=sub/conftest.Po tmpdepfile=sub/conftest.TPo \
- $SHELL ./depcomp $depcc -c -o sub/conftest.${OBJEXT-o} sub/conftest.c \
+ $SHELL ./depcomp $depcc -c $am__minus_obj sub/conftest.c \
>/dev/null 2>conftest.err &&
+ grep sub/conftst1.h sub/conftest.Po > /dev/null 2>&1 &&
grep sub/conftst6.h sub/conftest.Po > /dev/null 2>&1 &&
- grep sub/conftest.${OBJEXT-o} sub/conftest.Po > /dev/null 2>&1 &&
+ grep $am__obj sub/conftest.Po > /dev/null 2>&1 &&
${MAKE-make} -s -f confmf > /dev/null 2>&1; then
# icc doesn't choke on unknown options, it will just issue warnings
# or remarks (even with -Werror). So we grep stderr for any message
@@ -3030,13 +4111,11 @@ else
fi
fi
-echo "$as_me:$LINENO: result: $am_cv_CXX_dependencies_compiler_type" >&5
-echo "${ECHO_T}$am_cv_CXX_dependencies_compiler_type" >&6
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $am_cv_CXX_dependencies_compiler_type" >&5
+$as_echo "$am_cv_CXX_dependencies_compiler_type" >&6; }
CXXDEPMODE=depmode=$am_cv_CXX_dependencies_compiler_type
-
-
-if
+ if
test "x$enable_dependency_tracking" != xno \
&& test "$am_cv_CXX_dependencies_compiler_type" = gcc3; then
am__fastdepCXX_TRUE=
@@ -3055,10 +4134,10 @@ ac_compiler_gnu=$ac_cv_c_compiler_gnu
if test -n "$ac_tool_prefix"; then
# Extract the first word of "${ac_tool_prefix}gcc", so it can be a program name with args.
set dummy ${ac_tool_prefix}gcc; ac_word=$2
-echo "$as_me:$LINENO: checking for $ac_word" >&5
-echo $ECHO_N "checking for $ac_word... $ECHO_C" >&6
-if test "${ac_cv_prog_CC+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
+$as_echo_n "checking for $ac_word... " >&6; }
+if ${ac_cv_prog_CC+:} false; then :
+ $as_echo_n "(cached) " >&6
else
if test -n "$CC"; then
ac_cv_prog_CC="$CC" # Let the user override the test.
@@ -3068,35 +4147,37 @@ for as_dir in $PATH
do
IFS=$as_save_IFS
test -z "$as_dir" && as_dir=.
- for ac_exec_ext in '' $ac_executable_extensions; do
- if $as_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
+ for ac_exec_ext in '' $ac_executable_extensions; do
+ if as_fn_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
ac_cv_prog_CC="${ac_tool_prefix}gcc"
- echo "$as_me:$LINENO: found $as_dir/$ac_word$ac_exec_ext" >&5
+ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
break 2
fi
done
-done
+ done
+IFS=$as_save_IFS
fi
fi
CC=$ac_cv_prog_CC
if test -n "$CC"; then
- echo "$as_me:$LINENO: result: $CC" >&5
-echo "${ECHO_T}$CC" >&6
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $CC" >&5
+$as_echo "$CC" >&6; }
else
- echo "$as_me:$LINENO: result: no" >&5
-echo "${ECHO_T}no" >&6
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
+$as_echo "no" >&6; }
fi
+
fi
if test -z "$ac_cv_prog_CC"; then
ac_ct_CC=$CC
# Extract the first word of "gcc", so it can be a program name with args.
set dummy gcc; ac_word=$2
-echo "$as_me:$LINENO: checking for $ac_word" >&5
-echo $ECHO_N "checking for $ac_word... $ECHO_C" >&6
-if test "${ac_cv_prog_ac_ct_CC+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
+$as_echo_n "checking for $ac_word... " >&6; }
+if ${ac_cv_prog_ac_ct_CC+:} false; then :
+ $as_echo_n "(cached) " >&6
else
if test -n "$ac_ct_CC"; then
ac_cv_prog_ac_ct_CC="$ac_ct_CC" # Let the user override the test.
@@ -3106,39 +4187,50 @@ for as_dir in $PATH
do
IFS=$as_save_IFS
test -z "$as_dir" && as_dir=.
- for ac_exec_ext in '' $ac_executable_extensions; do
- if $as_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
+ for ac_exec_ext in '' $ac_executable_extensions; do
+ if as_fn_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
ac_cv_prog_ac_ct_CC="gcc"
- echo "$as_me:$LINENO: found $as_dir/$ac_word$ac_exec_ext" >&5
+ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
break 2
fi
done
-done
+ done
+IFS=$as_save_IFS
fi
fi
ac_ct_CC=$ac_cv_prog_ac_ct_CC
if test -n "$ac_ct_CC"; then
- echo "$as_me:$LINENO: result: $ac_ct_CC" >&5
-echo "${ECHO_T}$ac_ct_CC" >&6
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_ct_CC" >&5
+$as_echo "$ac_ct_CC" >&6; }
else
- echo "$as_me:$LINENO: result: no" >&5
-echo "${ECHO_T}no" >&6
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
+$as_echo "no" >&6; }
fi
- CC=$ac_ct_CC
+ if test "x$ac_ct_CC" = x; then
+ CC=""
+ else
+ case $cross_compiling:$ac_tool_warned in
+yes:)
+{ $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: using cross tools not prefixed with host triplet" >&5
+$as_echo "$as_me: WARNING: using cross tools not prefixed with host triplet" >&2;}
+ac_tool_warned=yes ;;
+esac
+ CC=$ac_ct_CC
+ fi
else
CC="$ac_cv_prog_CC"
fi
if test -z "$CC"; then
- if test -n "$ac_tool_prefix"; then
- # Extract the first word of "${ac_tool_prefix}cc", so it can be a program name with args.
+ if test -n "$ac_tool_prefix"; then
+ # Extract the first word of "${ac_tool_prefix}cc", so it can be a program name with args.
set dummy ${ac_tool_prefix}cc; ac_word=$2
-echo "$as_me:$LINENO: checking for $ac_word" >&5
-echo $ECHO_N "checking for $ac_word... $ECHO_C" >&6
-if test "${ac_cv_prog_CC+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
+$as_echo_n "checking for $ac_word... " >&6; }
+if ${ac_cv_prog_CC+:} false; then :
+ $as_echo_n "(cached) " >&6
else
if test -n "$CC"; then
ac_cv_prog_CC="$CC" # Let the user override the test.
@@ -3148,77 +4240,37 @@ for as_dir in $PATH
do
IFS=$as_save_IFS
test -z "$as_dir" && as_dir=.
- for ac_exec_ext in '' $ac_executable_extensions; do
- if $as_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
+ for ac_exec_ext in '' $ac_executable_extensions; do
+ if as_fn_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
ac_cv_prog_CC="${ac_tool_prefix}cc"
- echo "$as_me:$LINENO: found $as_dir/$ac_word$ac_exec_ext" >&5
+ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
break 2
fi
done
-done
+ done
+IFS=$as_save_IFS
fi
fi
CC=$ac_cv_prog_CC
if test -n "$CC"; then
- echo "$as_me:$LINENO: result: $CC" >&5
-echo "${ECHO_T}$CC" >&6
-else
- echo "$as_me:$LINENO: result: no" >&5
-echo "${ECHO_T}no" >&6
-fi
-
-fi
-if test -z "$ac_cv_prog_CC"; then
- ac_ct_CC=$CC
- # Extract the first word of "cc", so it can be a program name with args.
-set dummy cc; ac_word=$2
-echo "$as_me:$LINENO: checking for $ac_word" >&5
-echo $ECHO_N "checking for $ac_word... $ECHO_C" >&6
-if test "${ac_cv_prog_ac_ct_CC+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- if test -n "$ac_ct_CC"; then
- ac_cv_prog_ac_ct_CC="$ac_ct_CC" # Let the user override the test.
-else
-as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
-for as_dir in $PATH
-do
- IFS=$as_save_IFS
- test -z "$as_dir" && as_dir=.
- for ac_exec_ext in '' $ac_executable_extensions; do
- if $as_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
- ac_cv_prog_ac_ct_CC="cc"
- echo "$as_me:$LINENO: found $as_dir/$ac_word$ac_exec_ext" >&5
- break 2
- fi
-done
-done
-
-fi
-fi
-ac_ct_CC=$ac_cv_prog_ac_ct_CC
-if test -n "$ac_ct_CC"; then
- echo "$as_me:$LINENO: result: $ac_ct_CC" >&5
-echo "${ECHO_T}$ac_ct_CC" >&6
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $CC" >&5
+$as_echo "$CC" >&6; }
else
- echo "$as_me:$LINENO: result: no" >&5
-echo "${ECHO_T}no" >&6
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
+$as_echo "no" >&6; }
fi
- CC=$ac_ct_CC
-else
- CC="$ac_cv_prog_CC"
-fi
+ fi
fi
if test -z "$CC"; then
# Extract the first word of "cc", so it can be a program name with args.
set dummy cc; ac_word=$2
-echo "$as_me:$LINENO: checking for $ac_word" >&5
-echo $ECHO_N "checking for $ac_word... $ECHO_C" >&6
-if test "${ac_cv_prog_CC+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
+$as_echo_n "checking for $ac_word... " >&6; }
+if ${ac_cv_prog_CC+:} false; then :
+ $as_echo_n "(cached) " >&6
else
if test -n "$CC"; then
ac_cv_prog_CC="$CC" # Let the user override the test.
@@ -3229,18 +4281,19 @@ for as_dir in $PATH
do
IFS=$as_save_IFS
test -z "$as_dir" && as_dir=.
- for ac_exec_ext in '' $ac_executable_extensions; do
- if $as_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
+ for ac_exec_ext in '' $ac_executable_extensions; do
+ if as_fn_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
if test "$as_dir/$ac_word$ac_exec_ext" = "/usr/ucb/cc"; then
ac_prog_rejected=yes
continue
fi
ac_cv_prog_CC="cc"
- echo "$as_me:$LINENO: found $as_dir/$ac_word$ac_exec_ext" >&5
+ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
break 2
fi
done
-done
+ done
+IFS=$as_save_IFS
if test $ac_prog_rejected = yes; then
# We found a bogon in the path, so make sure we never use it.
@@ -3258,24 +4311,25 @@ fi
fi
CC=$ac_cv_prog_CC
if test -n "$CC"; then
- echo "$as_me:$LINENO: result: $CC" >&5
-echo "${ECHO_T}$CC" >&6
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $CC" >&5
+$as_echo "$CC" >&6; }
else
- echo "$as_me:$LINENO: result: no" >&5
-echo "${ECHO_T}no" >&6
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
+$as_echo "no" >&6; }
fi
+
fi
if test -z "$CC"; then
if test -n "$ac_tool_prefix"; then
- for ac_prog in cl
+ for ac_prog in cl.exe
do
# Extract the first word of "$ac_tool_prefix$ac_prog", so it can be a program name with args.
set dummy $ac_tool_prefix$ac_prog; ac_word=$2
-echo "$as_me:$LINENO: checking for $ac_word" >&5
-echo $ECHO_N "checking for $ac_word... $ECHO_C" >&6
-if test "${ac_cv_prog_CC+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
+$as_echo_n "checking for $ac_word... " >&6; }
+if ${ac_cv_prog_CC+:} false; then :
+ $as_echo_n "(cached) " >&6
else
if test -n "$CC"; then
ac_cv_prog_CC="$CC" # Let the user override the test.
@@ -3285,39 +4339,41 @@ for as_dir in $PATH
do
IFS=$as_save_IFS
test -z "$as_dir" && as_dir=.
- for ac_exec_ext in '' $ac_executable_extensions; do
- if $as_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
+ for ac_exec_ext in '' $ac_executable_extensions; do
+ if as_fn_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
ac_cv_prog_CC="$ac_tool_prefix$ac_prog"
- echo "$as_me:$LINENO: found $as_dir/$ac_word$ac_exec_ext" >&5
+ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
break 2
fi
done
-done
+ done
+IFS=$as_save_IFS
fi
fi
CC=$ac_cv_prog_CC
if test -n "$CC"; then
- echo "$as_me:$LINENO: result: $CC" >&5
-echo "${ECHO_T}$CC" >&6
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $CC" >&5
+$as_echo "$CC" >&6; }
else
- echo "$as_me:$LINENO: result: no" >&5
-echo "${ECHO_T}no" >&6
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
+$as_echo "no" >&6; }
fi
+
test -n "$CC" && break
done
fi
if test -z "$CC"; then
ac_ct_CC=$CC
- for ac_prog in cl
+ for ac_prog in cl.exe
do
# Extract the first word of "$ac_prog", so it can be a program name with args.
set dummy $ac_prog; ac_word=$2
-echo "$as_me:$LINENO: checking for $ac_word" >&5
-echo $ECHO_N "checking for $ac_word... $ECHO_C" >&6
-if test "${ac_cv_prog_ac_ct_CC+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
+$as_echo_n "checking for $ac_word... " >&6; }
+if ${ac_cv_prog_ac_ct_CC+:} false; then :
+ $as_echo_n "(cached) " >&6
else
if test -n "$ac_ct_CC"; then
ac_cv_prog_ac_ct_CC="$ac_ct_CC" # Let the user override the test.
@@ -3327,71 +4383,83 @@ for as_dir in $PATH
do
IFS=$as_save_IFS
test -z "$as_dir" && as_dir=.
- for ac_exec_ext in '' $ac_executable_extensions; do
- if $as_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
+ for ac_exec_ext in '' $ac_executable_extensions; do
+ if as_fn_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
ac_cv_prog_ac_ct_CC="$ac_prog"
- echo "$as_me:$LINENO: found $as_dir/$ac_word$ac_exec_ext" >&5
+ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
break 2
fi
done
-done
+ done
+IFS=$as_save_IFS
fi
fi
ac_ct_CC=$ac_cv_prog_ac_ct_CC
if test -n "$ac_ct_CC"; then
- echo "$as_me:$LINENO: result: $ac_ct_CC" >&5
-echo "${ECHO_T}$ac_ct_CC" >&6
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_ct_CC" >&5
+$as_echo "$ac_ct_CC" >&6; }
else
- echo "$as_me:$LINENO: result: no" >&5
-echo "${ECHO_T}no" >&6
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
+$as_echo "no" >&6; }
fi
+
test -n "$ac_ct_CC" && break
done
- CC=$ac_ct_CC
+ if test "x$ac_ct_CC" = x; then
+ CC=""
+ else
+ case $cross_compiling:$ac_tool_warned in
+yes:)
+{ $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: using cross tools not prefixed with host triplet" >&5
+$as_echo "$as_me: WARNING: using cross tools not prefixed with host triplet" >&2;}
+ac_tool_warned=yes ;;
+esac
+ CC=$ac_ct_CC
+ fi
fi
fi
-test -z "$CC" && { { echo "$as_me:$LINENO: error: no acceptable C compiler found in \$PATH
-See \`config.log' for more details." >&5
-echo "$as_me: error: no acceptable C compiler found in \$PATH
-See \`config.log' for more details." >&2;}
- { (exit 1); exit 1; }; }
+test -z "$CC" && { { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
+$as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
+as_fn_error $? "no acceptable C compiler found in \$PATH
+See \`config.log' for more details" "$LINENO" 5; }
# Provide some information about the compiler.
-echo "$as_me:$LINENO:" \
- "checking for C compiler version" >&5
-ac_compiler=`set X $ac_compile; echo $2`
-{ (eval echo "$as_me:$LINENO: \"$ac_compiler --version </dev/null >&5\"") >&5
- (eval $ac_compiler --version </dev/null >&5) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }
-{ (eval echo "$as_me:$LINENO: \"$ac_compiler -v </dev/null >&5\"") >&5
- (eval $ac_compiler -v </dev/null >&5) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }
-{ (eval echo "$as_me:$LINENO: \"$ac_compiler -V </dev/null >&5\"") >&5
- (eval $ac_compiler -V </dev/null >&5) 2>&5
+$as_echo "$as_me:${as_lineno-$LINENO}: checking for C compiler version" >&5
+set X $ac_compile
+ac_compiler=$2
+for ac_option in --version -v -V -qversion; do
+ { { ac_try="$ac_compiler $ac_option >&5"
+case "(($ac_try" in
+ *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
+ *) ac_try_echo=$ac_try;;
+esac
+eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\""
+$as_echo "$ac_try_echo"; } >&5
+ (eval "$ac_compiler $ac_option >&5") 2>conftest.err
ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }
+ if test -s conftest.err; then
+ sed '10a\
+... rest of stderr output deleted ...
+ 10q' conftest.err >conftest.er1
+ cat conftest.er1 >&5
+ fi
+ rm -f conftest.er1 conftest.err
+ $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
+ test $ac_status = 0; }
+done
-echo "$as_me:$LINENO: checking whether we are using the GNU C compiler" >&5
-echo $ECHO_N "checking whether we are using the GNU C compiler... $ECHO_C" >&6
-if test "${ac_cv_c_compiler_gnu+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking whether we are using the GNU C compiler" >&5
+$as_echo_n "checking whether we are using the GNU C compiler... " >&6; }
+if ${ac_cv_c_compiler_gnu+:} false; then :
+ $as_echo_n "(cached) " >&6
else
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
+ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
/* end confdefs.h. */
int
@@ -3405,55 +4473,34 @@ main ()
return 0;
}
_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_c_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
+if ac_fn_c_try_compile "$LINENO"; then :
ac_compiler_gnu=yes
else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-ac_compiler_gnu=no
+ ac_compiler_gnu=no
fi
-rm -f conftest.err conftest.$ac_objext conftest.$ac_ext
+rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
ac_cv_c_compiler_gnu=$ac_compiler_gnu
fi
-echo "$as_me:$LINENO: result: $ac_cv_c_compiler_gnu" >&5
-echo "${ECHO_T}$ac_cv_c_compiler_gnu" >&6
-GCC=`test $ac_compiler_gnu = yes && echo yes`
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_c_compiler_gnu" >&5
+$as_echo "$ac_cv_c_compiler_gnu" >&6; }
+if test $ac_compiler_gnu = yes; then
+ GCC=yes
+else
+ GCC=
+fi
ac_test_CFLAGS=${CFLAGS+set}
ac_save_CFLAGS=$CFLAGS
-CFLAGS="-g"
-echo "$as_me:$LINENO: checking whether $CC accepts -g" >&5
-echo $ECHO_N "checking whether $CC accepts -g... $ECHO_C" >&6
-if test "${ac_cv_prog_cc_g+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking whether $CC accepts -g" >&5
+$as_echo_n "checking whether $CC accepts -g... " >&6; }
+if ${ac_cv_prog_cc_g+:} false; then :
+ $as_echo_n "(cached) " >&6
+else
+ ac_save_c_werror_flag=$ac_c_werror_flag
+ ac_c_werror_flag=yes
+ ac_cv_prog_cc_g=no
+ CFLAGS="-g"
+ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
/* end confdefs.h. */
int
@@ -3464,39 +4511,49 @@ main ()
return 0;
}
_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_c_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
+if ac_fn_c_try_compile "$LINENO"; then :
ac_cv_prog_cc_g=yes
else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
+ CFLAGS=""
+ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
+/* end confdefs.h. */
+
+int
+main ()
+{
+
+ ;
+ return 0;
+}
+_ACEOF
+if ac_fn_c_try_compile "$LINENO"; then :
+
+else
+ ac_c_werror_flag=$ac_save_c_werror_flag
+ CFLAGS="-g"
+ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
+/* end confdefs.h. */
-ac_cv_prog_cc_g=no
+int
+main ()
+{
+
+ ;
+ return 0;
+}
+_ACEOF
+if ac_fn_c_try_compile "$LINENO"; then :
+ ac_cv_prog_cc_g=yes
+fi
+rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
fi
-rm -f conftest.err conftest.$ac_objext conftest.$ac_ext
+rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
fi
-echo "$as_me:$LINENO: result: $ac_cv_prog_cc_g" >&5
-echo "${ECHO_T}$ac_cv_prog_cc_g" >&6
+rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
+ ac_c_werror_flag=$ac_save_c_werror_flag
+fi
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_prog_cc_g" >&5
+$as_echo "$ac_cv_prog_cc_g" >&6; }
if test "$ac_test_CFLAGS" = set; then
CFLAGS=$ac_save_CFLAGS
elif test $ac_cv_prog_cc_g = yes; then
@@ -3512,23 +4569,18 @@ else
CFLAGS=
fi
fi
-echo "$as_me:$LINENO: checking for $CC option to accept ANSI C" >&5
-echo $ECHO_N "checking for $CC option to accept ANSI C... $ECHO_C" >&6
-if test "${ac_cv_prog_cc_stdc+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $CC option to accept ISO C89" >&5
+$as_echo_n "checking for $CC option to accept ISO C89... " >&6; }
+if ${ac_cv_prog_cc_c89+:} false; then :
+ $as_echo_n "(cached) " >&6
else
- ac_cv_prog_cc_stdc=no
+ ac_cv_prog_cc_c89=no
ac_save_CC=$CC
-cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
+cat confdefs.h - <<_ACEOF >conftest.$ac_ext
/* end confdefs.h. */
#include <stdarg.h>
#include <stdio.h>
-#include <sys/types.h>
-#include <sys/stat.h>
+struct stat;
/* Most of the following tests are stolen from RCS 5.7's src/conf.sh. */
struct buf { int x; };
FILE * (*rcsopen) (struct buf *, struct stat *, int);
@@ -3551,12 +4603,17 @@ static char *f (char * (*g) (char **, int), char **p, ...)
/* OSF 4.0 Compaq cc is some sort of almost-ANSI by default. It has
function prototypes and stuff, but not '\xHH' hex character constants.
These don't provoke an error unfortunately, instead are silently treated
- as 'x'. The following induces an error, until -std1 is added to get
+ as 'x'. The following induces an error, until -std is added to get
proper ANSI mode. Curiously '\x00'!='x' always comes out true, for an
array size at least. It's necessary to write '\x00'==0 to get something
- that's true only with -std1. */
+ that's true only with -std. */
int osf4_cc_array ['\x00' == 0 ? 1 : -1];
+/* IBM C 6 for AIX is almost-ANSI by default, but it replaces macro parameters
+ inside strings and character constants. */
+#define FOO(x) 'x'
+int xlc6_cc_array[FOO(a) == 'x' ? 1 : -1];
+
int test (int i, double x);
struct s1 {int (*f) (int a);};
struct s2 {int (*f) (double a);};
@@ -3571,206 +4628,38 @@ return f (e, argv, 0) != argv[0] || f (e, argv, 1) != argv[1];
return 0;
}
_ACEOF
-# Don't try gcc -ansi; that turns off useful extensions and
-# breaks some systems' header files.
-# AIX -qlanglvl=ansi
-# Ultrix and OSF/1 -std1
-# HP-UX 10.20 and later -Ae
-# HP-UX older versions -Aa -D_HPUX_SOURCE
-# SVR4 -Xc -D__EXTENSIONS__
-for ac_arg in "" -qlanglvl=ansi -std1 -Ae "-Aa -D_HPUX_SOURCE" "-Xc -D__EXTENSIONS__"
+for ac_arg in '' -qlanglvl=extc89 -qlanglvl=ansi -std \
+ -Ae "-Aa -D_HPUX_SOURCE" "-Xc -D__EXTENSIONS__"
do
CC="$ac_save_CC $ac_arg"
- rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_c_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
- ac_cv_prog_cc_stdc=$ac_arg
-break
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
+ if ac_fn_c_try_compile "$LINENO"; then :
+ ac_cv_prog_cc_c89=$ac_arg
fi
-rm -f conftest.err conftest.$ac_objext
+rm -f core conftest.err conftest.$ac_objext
+ test "x$ac_cv_prog_cc_c89" != "xno" && break
done
-rm -f conftest.$ac_ext conftest.$ac_objext
+rm -f conftest.$ac_ext
CC=$ac_save_CC
fi
-
-case "x$ac_cv_prog_cc_stdc" in
- x|xno)
- echo "$as_me:$LINENO: result: none needed" >&5
-echo "${ECHO_T}none needed" >&6 ;;
+# AC_CACHE_VAL
+case "x$ac_cv_prog_cc_c89" in
+ x)
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: none needed" >&5
+$as_echo "none needed" >&6; } ;;
+ xno)
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: unsupported" >&5
+$as_echo "unsupported" >&6; } ;;
*)
- echo "$as_me:$LINENO: result: $ac_cv_prog_cc_stdc" >&5
-echo "${ECHO_T}$ac_cv_prog_cc_stdc" >&6
- CC="$CC $ac_cv_prog_cc_stdc" ;;
+ CC="$CC $ac_cv_prog_cc_c89"
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_prog_cc_c89" >&5
+$as_echo "$ac_cv_prog_cc_c89" >&6; } ;;
esac
+if test "x$ac_cv_prog_cc_c89" != xno; then :
-# Some people use a C++ compiler to compile C. Since we use `exit',
-# in C++ we need to declare it. In case someone uses the same compiler
-# for both compiling C and C++ we need to have the C++ compiler decide
-# the declaration of exit, since it's the most demanding environment.
-cat >conftest.$ac_ext <<_ACEOF
-#ifndef __cplusplus
- choke me
-#endif
-_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_c_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
- for ac_declaration in \
- '' \
- 'extern "C" void std::exit (int) throw (); using std::exit;' \
- 'extern "C" void std::exit (int); using std::exit;' \
- 'extern "C" void exit (int) throw ();' \
- 'extern "C" void exit (int);' \
- 'void exit (int);'
-do
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-$ac_declaration
-#include <stdlib.h>
-int
-main ()
-{
-exit (42);
- ;
- return 0;
-}
-_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_c_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
- :
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-continue
-fi
-rm -f conftest.err conftest.$ac_objext conftest.$ac_ext
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-$ac_declaration
-int
-main ()
-{
-exit (42);
- ;
- return 0;
-}
-_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_c_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
- break
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-fi
-rm -f conftest.err conftest.$ac_objext conftest.$ac_ext
-done
-rm -f conftest*
-if test -n "$ac_declaration"; then
- echo '#ifdef __cplusplus' >>confdefs.h
- echo $ac_declaration >>confdefs.h
- echo '#endif' >>confdefs.h
fi
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-fi
-rm -f conftest.err conftest.$ac_objext conftest.$ac_ext
-ac_ext=cc
+ac_ext=cpp
ac_cpp='$CXXCPP $CPPFLAGS'
ac_compile='$CXX -c $CXXFLAGS $CPPFLAGS conftest.$ac_ext >&5'
ac_link='$CXX -o conftest$ac_exeext $CXXFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5'
@@ -3778,17 +4667,18 @@ ac_compiler_gnu=$ac_cv_cxx_compiler_gnu
depcc="$CC" am_compiler_list=
-echo "$as_me:$LINENO: checking dependency style of $depcc" >&5
-echo $ECHO_N "checking dependency style of $depcc... $ECHO_C" >&6
-if test "${am_cv_CC_dependencies_compiler_type+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking dependency style of $depcc" >&5
+$as_echo_n "checking dependency style of $depcc... " >&6; }
+if ${am_cv_CC_dependencies_compiler_type+:} false; then :
+ $as_echo_n "(cached) " >&6
else
if test -z "$AMDEP_TRUE" && test -f "$am_depcomp"; then
# We make a subdir and do the tests there. Otherwise we can end up
# making bogus files that we don't know about and never remove. For
# instance it was reported that on HP-UX the gcc test will end up
- # making a dummy file named `D' -- because `-MD' means `put the output
- # in D'.
+ # making a dummy file named 'D' -- because '-MD' means "put the output
+ # in D".
+ rm -rf conftest.dir
mkdir conftest.dir
# Copy depcomp to subdir because otherwise we won't find it if we're
# using a relative directory.
@@ -3806,6 +4696,11 @@ else
if test "$am_compiler_list" = ""; then
am_compiler_list=`sed -n 's/^#*\([a-zA-Z0-9]*\))$/\1/p' < ./depcomp`
fi
+ am__universal=false
+ case " $depcc " in #(
+ *\ -arch\ *\ -arch\ *) am__universal=true ;;
+ esac
+
for depmode in $am_compiler_list; do
# Setup a source with many dependencies, because some compilers
# like to wrap large dependency lists on column 80 (with \), and
@@ -3817,34 +4712,49 @@ else
: > sub/conftest.c
for i in 1 2 3 4 5 6; do
echo '#include "conftst'$i'.h"' >> sub/conftest.c
- # Using `: > sub/conftst$i.h' creates only sub/conftst1.h with
- # Solaris 8's {/usr,}/bin/sh.
- touch sub/conftst$i.h
+ # Using ": > sub/conftst$i.h" creates only sub/conftst1.h with
+ # Solaris 10 /bin/sh.
+ echo '/* dummy */' > sub/conftst$i.h
done
echo "${am__include} ${am__quote}sub/conftest.Po${am__quote}" > confmf
+ # We check with '-c' and '-o' for the sake of the "dashmstdout"
+ # mode. It turns out that the SunPro C++ compiler does not properly
+ # handle '-M -o', and we need to detect this. Also, some Intel
+ # versions had trouble with output in subdirs.
+ am__obj=sub/conftest.${OBJEXT-o}
+ am__minus_obj="-o $am__obj"
case $depmode in
+ gcc)
+ # This depmode causes a compiler race in universal mode.
+ test "$am__universal" = false || continue
+ ;;
nosideeffect)
- # after this tag, mechanisms are not by side-effect, so they'll
- # only be used when explicitly requested
+ # After this tag, mechanisms are not by side-effect, so they'll
+ # only be used when explicitly requested.
if test "x$enable_dependency_tracking" = xyes; then
continue
else
break
fi
;;
+ msvc7 | msvc7msys | msvisualcpp | msvcmsys)
+ # This compiler won't grok '-c -o', but also, the minuso test has
+ # not run yet. These depmodes are late enough in the game, and
+ # so weak that their functioning should not be impacted.
+ am__obj=conftest.${OBJEXT-o}
+ am__minus_obj=
+ ;;
none) break ;;
esac
- # We check with `-c' and `-o' for the sake of the "dashmstdout"
- # mode. It turns out that the SunPro C++ compiler does not properly
- # handle `-M -o', and we need to detect this.
if depmode=$depmode \
- source=sub/conftest.c object=sub/conftest.${OBJEXT-o} \
+ source=sub/conftest.c object=$am__obj \
depfile=sub/conftest.Po tmpdepfile=sub/conftest.TPo \
- $SHELL ./depcomp $depcc -c -o sub/conftest.${OBJEXT-o} sub/conftest.c \
+ $SHELL ./depcomp $depcc -c $am__minus_obj sub/conftest.c \
>/dev/null 2>conftest.err &&
+ grep sub/conftst1.h sub/conftest.Po > /dev/null 2>&1 &&
grep sub/conftst6.h sub/conftest.Po > /dev/null 2>&1 &&
- grep sub/conftest.${OBJEXT-o} sub/conftest.Po > /dev/null 2>&1 &&
+ grep $am__obj sub/conftest.Po > /dev/null 2>&1 &&
${MAKE-make} -s -f confmf > /dev/null 2>&1; then
# icc doesn't choke on unknown options, it will just issue warnings
# or remarks (even with -Werror). So we grep stderr for any message
@@ -3868,13 +4778,11 @@ else
fi
fi
-echo "$as_me:$LINENO: result: $am_cv_CC_dependencies_compiler_type" >&5
-echo "${ECHO_T}$am_cv_CC_dependencies_compiler_type" >&6
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $am_cv_CC_dependencies_compiler_type" >&5
+$as_echo "$am_cv_CC_dependencies_compiler_type" >&6; }
CCDEPMODE=depmode=$am_cv_CC_dependencies_compiler_type
-
-
-if
+ if
test "x$enable_dependency_tracking" != xno \
&& test "$am_cv_CC_dependencies_compiler_type" = gcc3; then
am__fastdepCC_TRUE=
@@ -3885,42 +4793,44 @@ else
fi
-echo "$as_me:$LINENO: checking whether ${MAKE-make} sets \$(MAKE)" >&5
-echo $ECHO_N "checking whether ${MAKE-make} sets \$(MAKE)... $ECHO_C" >&6
-set dummy ${MAKE-make}; ac_make=`echo "$2" | sed 'y,:./+-,___p_,'`
-if eval "test \"\${ac_cv_prog_make_${ac_make}_set+set}\" = set"; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking whether ${MAKE-make} sets \$(MAKE)" >&5
+$as_echo_n "checking whether ${MAKE-make} sets \$(MAKE)... " >&6; }
+set x ${MAKE-make}
+ac_make=`$as_echo "$2" | sed 's/+/p/g; s/[^a-zA-Z0-9_]/_/g'`
+if eval \${ac_cv_prog_make_${ac_make}_set+:} false; then :
+ $as_echo_n "(cached) " >&6
else
cat >conftest.make <<\_ACEOF
+SHELL = /bin/sh
all:
- @echo 'ac_maketemp="$(MAKE)"'
+ @echo '@@@%%%=$(MAKE)=@@@%%%'
_ACEOF
-# GNU make sometimes prints "make[1]: Entering...", which would confuse us.
-eval `${MAKE-make} -f conftest.make 2>/dev/null | grep temp=`
-if test -n "$ac_maketemp"; then
- eval ac_cv_prog_make_${ac_make}_set=yes
-else
- eval ac_cv_prog_make_${ac_make}_set=no
-fi
+# GNU make sometimes prints "make[1]: Entering ...", which would confuse us.
+case `${MAKE-make} -f conftest.make 2>/dev/null` in
+ *@@@%%%=?*=@@@%%%*)
+ eval ac_cv_prog_make_${ac_make}_set=yes;;
+ *)
+ eval ac_cv_prog_make_${ac_make}_set=no;;
+esac
rm -f conftest.make
fi
-if eval "test \"`echo '$ac_cv_prog_make_'${ac_make}_set`\" = yes"; then
- echo "$as_me:$LINENO: result: yes" >&5
-echo "${ECHO_T}yes" >&6
+if eval test \$ac_cv_prog_make_${ac_make}_set = yes; then
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
+$as_echo "yes" >&6; }
SET_MAKE=
else
- echo "$as_me:$LINENO: result: no" >&5
-echo "${ECHO_T}no" >&6
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
+$as_echo "no" >&6; }
SET_MAKE="MAKE=${MAKE-make}"
fi
if test -n "$ac_tool_prefix"; then
# Extract the first word of "${ac_tool_prefix}ranlib", so it can be a program name with args.
set dummy ${ac_tool_prefix}ranlib; ac_word=$2
-echo "$as_me:$LINENO: checking for $ac_word" >&5
-echo $ECHO_N "checking for $ac_word... $ECHO_C" >&6
-if test "${ac_cv_prog_RANLIB+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
+$as_echo_n "checking for $ac_word... " >&6; }
+if ${ac_cv_prog_RANLIB+:} false; then :
+ $as_echo_n "(cached) " >&6
else
if test -n "$RANLIB"; then
ac_cv_prog_RANLIB="$RANLIB" # Let the user override the test.
@@ -3930,35 +4840,37 @@ for as_dir in $PATH
do
IFS=$as_save_IFS
test -z "$as_dir" && as_dir=.
- for ac_exec_ext in '' $ac_executable_extensions; do
- if $as_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
+ for ac_exec_ext in '' $ac_executable_extensions; do
+ if as_fn_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
ac_cv_prog_RANLIB="${ac_tool_prefix}ranlib"
- echo "$as_me:$LINENO: found $as_dir/$ac_word$ac_exec_ext" >&5
+ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
break 2
fi
done
-done
+ done
+IFS=$as_save_IFS
fi
fi
RANLIB=$ac_cv_prog_RANLIB
if test -n "$RANLIB"; then
- echo "$as_me:$LINENO: result: $RANLIB" >&5
-echo "${ECHO_T}$RANLIB" >&6
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $RANLIB" >&5
+$as_echo "$RANLIB" >&6; }
else
- echo "$as_me:$LINENO: result: no" >&5
-echo "${ECHO_T}no" >&6
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
+$as_echo "no" >&6; }
fi
+
fi
if test -z "$ac_cv_prog_RANLIB"; then
ac_ct_RANLIB=$RANLIB
# Extract the first word of "ranlib", so it can be a program name with args.
set dummy ranlib; ac_word=$2
-echo "$as_me:$LINENO: checking for $ac_word" >&5
-echo $ECHO_N "checking for $ac_word... $ECHO_C" >&6
-if test "${ac_cv_prog_ac_ct_RANLIB+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
+$as_echo_n "checking for $ac_word... " >&6; }
+if ${ac_cv_prog_ac_ct_RANLIB+:} false; then :
+ $as_echo_n "(cached) " >&6
else
if test -n "$ac_ct_RANLIB"; then
ac_cv_prog_ac_ct_RANLIB="$ac_ct_RANLIB" # Let the user override the test.
@@ -3968,110 +4880,44 @@ for as_dir in $PATH
do
IFS=$as_save_IFS
test -z "$as_dir" && as_dir=.
- for ac_exec_ext in '' $ac_executable_extensions; do
- if $as_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
+ for ac_exec_ext in '' $ac_executable_extensions; do
+ if as_fn_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
ac_cv_prog_ac_ct_RANLIB="ranlib"
- echo "$as_me:$LINENO: found $as_dir/$ac_word$ac_exec_ext" >&5
+ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
break 2
fi
done
-done
+ done
+IFS=$as_save_IFS
- test -z "$ac_cv_prog_ac_ct_RANLIB" && ac_cv_prog_ac_ct_RANLIB=":"
fi
fi
ac_ct_RANLIB=$ac_cv_prog_ac_ct_RANLIB
if test -n "$ac_ct_RANLIB"; then
- echo "$as_me:$LINENO: result: $ac_ct_RANLIB" >&5
-echo "${ECHO_T}$ac_ct_RANLIB" >&6
-else
- echo "$as_me:$LINENO: result: no" >&5
-echo "${ECHO_T}no" >&6
-fi
-
- RANLIB=$ac_ct_RANLIB
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_ct_RANLIB" >&5
+$as_echo "$ac_ct_RANLIB" >&6; }
else
- RANLIB="$ac_cv_prog_RANLIB"
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
+$as_echo "no" >&6; }
fi
-# Find a good install program. We prefer a C program (faster),
-# so one script is as good as another. But avoid the broken or
-# incompatible versions:
-# SysV /etc/install, /usr/sbin/install
-# SunOS /usr/etc/install
-# IRIX /sbin/install
-# AIX /bin/install
-# AmigaOS /C/install, which installs bootblocks on floppy discs
-# AIX 4 /usr/bin/installbsd, which doesn't work without a -g flag
-# AFS /usr/afsws/bin/install, which mishandles nonexistent args
-# SVR4 /usr/ucb/install, which tries to use the nonexistent group "staff"
-# OS/2's system install, which has a completely different semantic
-# ./install, which can be erroneously created by make from ./install.sh.
-echo "$as_me:$LINENO: checking for a BSD-compatible install" >&5
-echo $ECHO_N "checking for a BSD-compatible install... $ECHO_C" >&6
-if test -z "$INSTALL"; then
-if test "${ac_cv_path_install+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
-for as_dir in $PATH
-do
- IFS=$as_save_IFS
- test -z "$as_dir" && as_dir=.
- # Account for people who put trailing slashes in PATH elements.
-case $as_dir/ in
- ./ | .// | /cC/* | \
- /etc/* | /usr/sbin/* | /usr/etc/* | /sbin/* | /usr/afsws/bin/* | \
- ?:\\/os2\\/install\\/* | ?:\\/OS2\\/INSTALL\\/* | \
- /usr/ucb/* ) ;;
- *)
- # OSF1 and SCO ODT 3.0 have their own names for install.
- # Don't use installbsd from OSF since it installs stuff as root
- # by default.
- for ac_prog in ginstall scoinst install; do
- for ac_exec_ext in '' $ac_executable_extensions; do
- if $as_executable_p "$as_dir/$ac_prog$ac_exec_ext"; then
- if test $ac_prog = install &&
- grep dspmsg "$as_dir/$ac_prog$ac_exec_ext" >/dev/null 2>&1; then
- # AIX install. It has an incompatible calling convention.
- :
- elif test $ac_prog = install &&
- grep pwplus "$as_dir/$ac_prog$ac_exec_ext" >/dev/null 2>&1; then
- # program-specific install script used by HP pwplus--don't use.
- :
- else
- ac_cv_path_install="$as_dir/$ac_prog$ac_exec_ext -c"
- break 3
- fi
- fi
- done
- done
- ;;
-esac
-done
-
-
-fi
- if test "${ac_cv_path_install+set}" = set; then
- INSTALL=$ac_cv_path_install
+ if test "x$ac_ct_RANLIB" = x; then
+ RANLIB=":"
else
- # As a last resort, use the slow shell script. We don't cache a
- # path for INSTALL within a source directory, because that will
- # break other packages using the cache if that directory is
- # removed, or if the path is relative.
- INSTALL=$ac_install_sh
+ case $cross_compiling:$ac_tool_warned in
+yes:)
+{ $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: using cross tools not prefixed with host triplet" >&5
+$as_echo "$as_me: WARNING: using cross tools not prefixed with host triplet" >&2;}
+ac_tool_warned=yes ;;
+esac
+ RANLIB=$ac_ct_RANLIB
fi
+else
+ RANLIB="$ac_cv_prog_RANLIB"
fi
-echo "$as_me:$LINENO: result: $INSTALL" >&5
-echo "${ECHO_T}$INSTALL" >&6
-# Use test -z because SunOS4 sh mishandles braces in ${var-val}.
-# It thinks the first close brace ends the variable substitution.
-test -z "$INSTALL_PROGRAM" && INSTALL_PROGRAM='${INSTALL}'
-test -z "$INSTALL_SCRIPT" && INSTALL_SCRIPT='${INSTALL}'
-test -z "$INSTALL_DATA" && INSTALL_DATA='${INSTALL} -m 644'
@@ -4079,69 +4925,71 @@ test -z "$INSTALL_DATA" && INSTALL_DATA='${INSTALL} -m 644'
if test -n "$PYTHON"; then
# If the user set $PYTHON, use it and don't search something else.
- echo "$as_me:$LINENO: checking whether $PYTHON version >= 2.4" >&5
-echo $ECHO_N "checking whether $PYTHON version >= 2.4... $ECHO_C" >&6
- prog="import sys, string
+ { $as_echo "$as_me:${as_lineno-$LINENO}: checking whether $PYTHON version is >= 2.4" >&5
+$as_echo_n "checking whether $PYTHON version is >= 2.4... " >&6; }
+ prog="import sys
# split strings by '.' and convert to numeric. Append some zeros
# because we need at least 4 digits for the hex conversion.
-minver = map(int, string.split('2.4', '.')) + [0, 0, 0]
+# map returns an iterator in Python 3.0 and a list in 2.x
+minver = list(map(int, '2.4'.split('.'))) + [0, 0, 0]
minverhex = 0
-for i in xrange(0, 4): minverhex = (minverhex << 8) + minver[i]
+# xrange is not present in Python 3.0 and range returns an iterator
+for i in list(range(0, 4)): minverhex = (minverhex << 8) + minver[i]
sys.exit(sys.hexversion < minverhex)"
if { echo "$as_me:$LINENO: $PYTHON -c "$prog"" >&5
($PYTHON -c "$prog") >&5 2>&5
ac_status=$?
echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; then
- echo "$as_me:$LINENO: result: yes" >&5
-echo "${ECHO_T}yes" >&6
+ (exit $ac_status); }; then :
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
+$as_echo "yes" >&6; }
else
- { { echo "$as_me:$LINENO: error: too old" >&5
-echo "$as_me: error: too old" >&2;}
- { (exit 1); exit 1; }; }
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
+$as_echo "no" >&6; }
+ as_fn_error $? "Python interpreter is too old" "$LINENO" 5
fi
-
am_display_PYTHON=$PYTHON
else
# Otherwise, try each interpreter until we find one that satisfies
# VERSION.
- echo "$as_me:$LINENO: checking for a Python interpreter with version >= 2.4" >&5
-echo $ECHO_N "checking for a Python interpreter with version >= 2.4... $ECHO_C" >&6
-if test "${am_cv_pathless_PYTHON+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
+ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for a Python interpreter with version >= 2.4" >&5
+$as_echo_n "checking for a Python interpreter with version >= 2.4... " >&6; }
+if ${am_cv_pathless_PYTHON+:} false; then :
+ $as_echo_n "(cached) " >&6
else
- for am_cv_pathless_PYTHON in python python2 python2.5 python2.4 python2.3 python2.2 python2.1 python2.0 python1.6 python1.5 none; do
+ for am_cv_pathless_PYTHON in python python2 python3 python3.3 python3.2 python3.1 python3.0 python2.7 python2.6 python2.5 python2.4 python2.3 python2.2 python2.1 python2.0 none; do
test "$am_cv_pathless_PYTHON" = none && break
- prog="import sys, string
+ prog="import sys
# split strings by '.' and convert to numeric. Append some zeros
# because we need at least 4 digits for the hex conversion.
-minver = map(int, string.split('2.4', '.')) + [0, 0, 0]
+# map returns an iterator in Python 3.0 and a list in 2.x
+minver = list(map(int, '2.4'.split('.'))) + [0, 0, 0]
minverhex = 0
-for i in xrange(0, 4): minverhex = (minverhex << 8) + minver[i]
+# xrange is not present in Python 3.0 and range returns an iterator
+for i in list(range(0, 4)): minverhex = (minverhex << 8) + minver[i]
sys.exit(sys.hexversion < minverhex)"
if { echo "$as_me:$LINENO: $am_cv_pathless_PYTHON -c "$prog"" >&5
($am_cv_pathless_PYTHON -c "$prog") >&5 2>&5
ac_status=$?
echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; then
+ (exit $ac_status); }; then :
break
fi
-
done
fi
-echo "$as_me:$LINENO: result: $am_cv_pathless_PYTHON" >&5
-echo "${ECHO_T}$am_cv_pathless_PYTHON" >&6
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $am_cv_pathless_PYTHON" >&5
+$as_echo "$am_cv_pathless_PYTHON" >&6; }
# Set $PYTHON to the absolute path of $am_cv_pathless_PYTHON.
if test "$am_cv_pathless_PYTHON" = none; then
PYTHON=:
else
# Extract the first word of "$am_cv_pathless_PYTHON", so it can be a program name with args.
set dummy $am_cv_pathless_PYTHON; ac_word=$2
-echo "$as_me:$LINENO: checking for $ac_word" >&5
-echo $ECHO_N "checking for $ac_word... $ECHO_C" >&6
-if test "${ac_cv_path_PYTHON+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
+$as_echo_n "checking for $ac_word... " >&6; }
+if ${ac_cv_path_PYTHON+:} false; then :
+ $as_echo_n "(cached) " >&6
else
case $PYTHON in
[\\/]* | ?:[\\/]*)
@@ -4153,49 +5001,48 @@ for as_dir in $PATH
do
IFS=$as_save_IFS
test -z "$as_dir" && as_dir=.
- for ac_exec_ext in '' $ac_executable_extensions; do
- if $as_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
+ for ac_exec_ext in '' $ac_executable_extensions; do
+ if as_fn_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
ac_cv_path_PYTHON="$as_dir/$ac_word$ac_exec_ext"
- echo "$as_me:$LINENO: found $as_dir/$ac_word$ac_exec_ext" >&5
+ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
break 2
fi
done
-done
+ done
+IFS=$as_save_IFS
;;
esac
fi
PYTHON=$ac_cv_path_PYTHON
-
if test -n "$PYTHON"; then
- echo "$as_me:$LINENO: result: $PYTHON" >&5
-echo "${ECHO_T}$PYTHON" >&6
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $PYTHON" >&5
+$as_echo "$PYTHON" >&6; }
else
- echo "$as_me:$LINENO: result: no" >&5
-echo "${ECHO_T}no" >&6
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
+$as_echo "no" >&6; }
fi
+
fi
am_display_PYTHON=$am_cv_pathless_PYTHON
fi
if test "$PYTHON" = :; then
- { { echo "$as_me:$LINENO: error: no suitable Python interpreter found" >&5
-echo "$as_me: error: no suitable Python interpreter found" >&2;}
- { (exit 1); exit 1; }; }
+ as_fn_error $? "no suitable Python interpreter found" "$LINENO" 5
else
- echo "$as_me:$LINENO: checking for $am_display_PYTHON version" >&5
-echo $ECHO_N "checking for $am_display_PYTHON version... $ECHO_C" >&6
-if test "${am_cv_python_version+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
+ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for $am_display_PYTHON version" >&5
+$as_echo_n "checking for $am_display_PYTHON version... " >&6; }
+if ${am_cv_python_version+:} false; then :
+ $as_echo_n "(cached) " >&6
else
- am_cv_python_version=`$PYTHON -c "import sys; print sys.version[:3]"`
+ am_cv_python_version=`$PYTHON -c "import sys; sys.stdout.write(sys.version[:3])"`
fi
-echo "$as_me:$LINENO: result: $am_cv_python_version" >&5
-echo "${ECHO_T}$am_cv_python_version" >&6
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $am_cv_python_version" >&5
+$as_echo "$am_cv_python_version" >&6; }
PYTHON_VERSION=$am_cv_python_version
@@ -4206,30 +5053,76 @@ echo "${ECHO_T}$am_cv_python_version" >&6
- echo "$as_me:$LINENO: checking for $am_display_PYTHON platform" >&5
-echo $ECHO_N "checking for $am_display_PYTHON platform... $ECHO_C" >&6
-if test "${am_cv_python_platform+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
+ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for $am_display_PYTHON platform" >&5
+$as_echo_n "checking for $am_display_PYTHON platform... " >&6; }
+if ${am_cv_python_platform+:} false; then :
+ $as_echo_n "(cached) " >&6
else
- am_cv_python_platform=`$PYTHON -c "import sys; print sys.platform"`
+ am_cv_python_platform=`$PYTHON -c "import sys; sys.stdout.write(sys.platform)"`
fi
-echo "$as_me:$LINENO: result: $am_cv_python_platform" >&5
-echo "${ECHO_T}$am_cv_python_platform" >&6
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $am_cv_python_platform" >&5
+$as_echo "$am_cv_python_platform" >&6; }
PYTHON_PLATFORM=$am_cv_python_platform
+ # Just factor out some code duplication.
+ am_python_setup_sysconfig="\
+import sys
+# Prefer sysconfig over distutils.sysconfig, for better compatibility
+# with python 3.x. See automake bug#10227.
+try:
+ import sysconfig
+except ImportError:
+ can_use_sysconfig = 0
+else:
+ can_use_sysconfig = 1
+# Can't use sysconfig in CPython 2.7, since it's broken in virtualenvs:
+# <https://github.com/pypa/virtualenv/issues/118>
+try:
+ from platform import python_implementation
+ if python_implementation() == 'CPython' and sys.version[:3] == '2.7':
+ can_use_sysconfig = 0
+except ImportError:
+ pass"
+
+
+ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for $am_display_PYTHON script directory" >&5
+$as_echo_n "checking for $am_display_PYTHON script directory... " >&6; }
+if ${am_cv_python_pythondir+:} false; then :
+ $as_echo_n "(cached) " >&6
+else
+ if test "x$prefix" = xNONE
+ then
+ am_py_prefix=$ac_default_prefix
+ else
+ am_py_prefix=$prefix
+ fi
+ am_cv_python_pythondir=`$PYTHON -c "
+$am_python_setup_sysconfig
+if can_use_sysconfig:
+ sitedir = sysconfig.get_path('purelib', vars={'base':'$am_py_prefix'})
+else:
+ from distutils import sysconfig
+ sitedir = sysconfig.get_python_lib(0, 0, prefix='$am_py_prefix')
+sys.stdout.write(sitedir)"`
+ case $am_cv_python_pythondir in
+ $am_py_prefix*)
+ am__strip_prefix=`echo "$am_py_prefix" | sed 's|.|.|g'`
+ am_cv_python_pythondir=`echo "$am_cv_python_pythondir" | sed "s,^$am__strip_prefix,$PYTHON_PREFIX,"`
+ ;;
+ *)
+ case $am_py_prefix in
+ /usr|/System*) ;;
+ *)
+ am_cv_python_pythondir=$PYTHON_PREFIX/lib/python$PYTHON_VERSION/site-packages
+ ;;
+ esac
+ ;;
+ esac
-
- echo "$as_me:$LINENO: checking for $am_display_PYTHON script directory" >&5
-echo $ECHO_N "checking for $am_display_PYTHON script directory... $ECHO_C" >&6
-if test "${am_cv_python_pythondir+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- am_cv_python_pythondir=`$PYTHON -c "from distutils import sysconfig; print sysconfig.get_python_lib(0,0,prefix='$PYTHON_PREFIX')" 2>/dev/null ||
- echo "$PYTHON_PREFIX/lib/python$PYTHON_VERSION/site-packages"`
fi
-echo "$as_me:$LINENO: result: $am_cv_python_pythondir" >&5
-echo "${ECHO_T}$am_cv_python_pythondir" >&6
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $am_cv_python_pythondir" >&5
+$as_echo "$am_cv_python_pythondir" >&6; }
pythondir=$am_cv_python_pythondir
@@ -4237,16 +5130,43 @@ echo "${ECHO_T}$am_cv_python_pythondir" >&6
pkgpythondir=\${pythondir}/$PACKAGE
- echo "$as_me:$LINENO: checking for $am_display_PYTHON extension module directory" >&5
-echo $ECHO_N "checking for $am_display_PYTHON extension module directory... $ECHO_C" >&6
-if test "${am_cv_python_pyexecdir+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
+ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for $am_display_PYTHON extension module directory" >&5
+$as_echo_n "checking for $am_display_PYTHON extension module directory... " >&6; }
+if ${am_cv_python_pyexecdir+:} false; then :
+ $as_echo_n "(cached) " >&6
else
- am_cv_python_pyexecdir=`$PYTHON -c "from distutils import sysconfig; print sysconfig.get_python_lib(1,0,prefix='$PYTHON_EXEC_PREFIX')" 2>/dev/null ||
- echo "${PYTHON_EXEC_PREFIX}/lib/python${PYTHON_VERSION}/site-packages"`
+ if test "x$exec_prefix" = xNONE
+ then
+ am_py_exec_prefix=$am_py_prefix
+ else
+ am_py_exec_prefix=$exec_prefix
+ fi
+ am_cv_python_pyexecdir=`$PYTHON -c "
+$am_python_setup_sysconfig
+if can_use_sysconfig:
+ sitedir = sysconfig.get_path('platlib', vars={'platbase':'$am_py_prefix'})
+else:
+ from distutils import sysconfig
+ sitedir = sysconfig.get_python_lib(1, 0, prefix='$am_py_prefix')
+sys.stdout.write(sitedir)"`
+ case $am_cv_python_pyexecdir in
+ $am_py_exec_prefix*)
+ am__strip_prefix=`echo "$am_py_exec_prefix" | sed 's|.|.|g'`
+ am_cv_python_pyexecdir=`echo "$am_cv_python_pyexecdir" | sed "s,^$am__strip_prefix,$PYTHON_EXEC_PREFIX,"`
+ ;;
+ *)
+ case $am_py_exec_prefix in
+ /usr|/System*) ;;
+ *)
+ am_cv_python_pyexecdir=$PYTHON_EXEC_PREFIX/lib/python$PYTHON_VERSION/site-packages
+ ;;
+ esac
+ ;;
+ esac
+
fi
-echo "$as_me:$LINENO: result: $am_cv_python_pyexecdir" >&5
-echo "${ECHO_T}$am_cv_python_pyexecdir" >&6
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $am_cv_python_pyexecdir" >&5
+$as_echo "$am_cv_python_pyexecdir" >&6; }
pyexecdir=$am_cv_python_pyexecdir
@@ -4299,11 +5219,9 @@ echo "${ECHO_T}$am_cv_python_pyexecdir" >&6
# CXXFLAGS="$CXXFLAGS $threadLib"
-
-# Check whether --with-boost or --without-boost was given.
-if test "${with_boost+set}" = set; then
- withval="$with_boost"
-
+# Check whether --with-boost was given.
+if test "${with_boost+set}" = set; then :
+ withval=$with_boost;
if test "$withval" = "no"; then
want_boost="no"
elif test "$withval" = "yes"; then
@@ -4316,27 +5234,26 @@ if test "${with_boost+set}" = set; then
else
want_boost="yes"
-fi;
+fi
-# Check whether --with-boost-libdir or --without-boost-libdir was given.
-if test "${with_boost_libdir+set}" = set; then
- withval="$with_boost_libdir"
+# Check whether --with-boost-libdir was given.
+if test "${with_boost_libdir+set}" = set; then :
+ withval=$with_boost_libdir;
if test -d $withval
then
ac_boost_lib_path="$withval"
else
- { { echo "$as_me:$LINENO: error: --with-boost-libdir expected directory name" >&5
-echo "$as_me: error: --with-boost-libdir expected directory name" >&2;}
- { (exit 1); exit 1; }; }
+ as_fn_error $? "--with-boost-libdir expected directory name" "$LINENO" 5
fi
else
ac_boost_lib_path=""
-fi;
+fi
+
if test "x$want_boost" = "xyes"; then
boost_lib_version_req=1.38.0
@@ -4348,8 +5265,8 @@ if test "x$want_boost" = "xyes"; then
boost_lib_version_req_sub_minor="0"
fi
WANT_BOOST_VERSION=`expr $boost_lib_version_req_major \* 100000 \+ $boost_lib_version_req_minor \* 100 \+ $boost_lib_version_req_sub_minor`
- echo "$as_me:$LINENO: checking for boostlib >= $boost_lib_version_req" >&5
-echo $ECHO_N "checking for boostlib >= $boost_lib_version_req... $ECHO_C" >&6
+ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for boostlib >= $boost_lib_version_req" >&5
+$as_echo_n "checking for boostlib >= $boost_lib_version_req... " >&6; }
succeeded=no
if test "$ac_boost_path" != ""; then
@@ -4377,17 +5294,13 @@ echo $ECHO_N "checking for boostlib >= $boost_lib_version_req... $ECHO_C" >&6
LDFLAGS="$LDFLAGS $BOOST_LDFLAGS"
export LDFLAGS
- ac_ext=cc
+ ac_ext=cpp
ac_cpp='$CXXCPP $CPPFLAGS'
ac_compile='$CXX -c $CXXFLAGS $CPPFLAGS conftest.$ac_ext >&5'
ac_link='$CXX -o conftest$ac_exeext $CXXFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5'
ac_compiler_gnu=$ac_cv_cxx_compiler_gnu
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
+ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
/* end confdefs.h. */
#include <boost/version.hpp>
@@ -4406,43 +5319,16 @@ main ()
return 0;
}
_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_cxx_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
+if ac_fn_cxx_try_compile "$LINENO"; then :
- echo "$as_me:$LINENO: result: yes" >&5
-echo "${ECHO_T}yes" >&6
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
+$as_echo "yes" >&6; }
succeeded=yes
found_system=yes
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-
-
fi
-rm -f conftest.err conftest.$ac_objext conftest.$ac_ext
- ac_ext=cc
+rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
+ ac_ext=cpp
ac_cpp='$CXXCPP $CPPFLAGS'
ac_compile='$CXX -c $CXXFLAGS $CPPFLAGS conftest.$ac_ext >&5'
ac_link='$CXX -o conftest$ac_exeext $CXXFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5'
@@ -4494,8 +5380,8 @@ ac_compiler_gnu=$ac_cv_cxx_compiler_gnu
stage_version_shorten=`expr $stage_version : '\([0-9]*\.[0-9]*\)'`
V_CHECK=`expr $stage_version_shorten \>\= $_version`
if test "$V_CHECK" = "1" -a "$ac_boost_lib_path" = "" ; then
- { echo "$as_me:$LINENO: We will use a staged boost library from $BOOST_ROOT" >&5
-echo "$as_me: We will use a staged boost library from $BOOST_ROOT" >&6;}
+ { $as_echo "$as_me:${as_lineno-$LINENO}: We will use a staged boost library from $BOOST_ROOT" >&5
+$as_echo "$as_me: We will use a staged boost library from $BOOST_ROOT" >&6;}
BOOST_CPPFLAGS="-I$BOOST_ROOT"
BOOST_LDFLAGS="-L$BOOST_ROOT/stage/lib"
fi
@@ -4508,17 +5394,13 @@ echo "$as_me: We will use a staged boost library from $BOOST_ROOT" >&6;}
LDFLAGS="$LDFLAGS $BOOST_LDFLAGS"
export LDFLAGS
- ac_ext=cc
+ ac_ext=cpp
ac_cpp='$CXXCPP $CPPFLAGS'
ac_compile='$CXX -c $CXXFLAGS $CPPFLAGS conftest.$ac_ext >&5'
ac_link='$CXX -o conftest$ac_exeext $CXXFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5'
ac_compiler_gnu=$ac_cv_cxx_compiler_gnu
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
+ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
/* end confdefs.h. */
#include <boost/version.hpp>
@@ -4537,43 +5419,16 @@ main ()
return 0;
}
_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_cxx_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
+if ac_fn_cxx_try_compile "$LINENO"; then :
- echo "$as_me:$LINENO: result: yes" >&5
-echo "${ECHO_T}yes" >&6
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
+$as_echo "yes" >&6; }
succeeded=yes
found_system=yes
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-
-
fi
-rm -f conftest.err conftest.$ac_objext conftest.$ac_ext
- ac_ext=cc
+rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
+ ac_ext=cpp
ac_cpp='$CXXCPP $CPPFLAGS'
ac_compile='$CXX -c $CXXFLAGS $CPPFLAGS conftest.$ac_ext >&5'
ac_link='$CXX -o conftest$ac_exeext $CXXFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5'
@@ -4583,20 +5438,16 @@ ac_compiler_gnu=$ac_cv_cxx_compiler_gnu
if test "$succeeded" != "yes" ; then
if test "$_version" = "0" ; then
- { { echo "$as_me:$LINENO: error: We could not detect the boost libraries (version $boost_lib_version_req_shorten or higher). If you have a staged boost library (still not installed) please specify \$BOOST_ROOT in your environment and do not give a PATH to --with-boost option. If you are sure you have boost installed, then check your version number looking in <boost/version.hpp>. See http://randspringer.de/boost for more documentation." >&5
-echo "$as_me: error: We could not detect the boost libraries (version $boost_lib_version_req_shorten or higher). If you have a staged boost library (still not installed) please specify \$BOOST_ROOT in your environment and do not give a PATH to --with-boost option. If you are sure you have boost installed, then check your version number looking in <boost/version.hpp>. See http://randspringer.de/boost for more documentation." >&2;}
- { (exit 1); exit 1; }; }
+ as_fn_error $? "We could not detect the boost libraries (version $boost_lib_version_req_shorten or higher). If you have a staged boost library (still not installed) please specify \$BOOST_ROOT in your environment and do not give a PATH to --with-boost option. If you are sure you have boost installed, then check your version number looking in <boost/version.hpp>. See http://randspringer.de/boost for more documentation." "$LINENO" 5
else
- { echo "$as_me:$LINENO: Your boost libraries seem to old (version $_version)." >&5
-echo "$as_me: Your boost libraries seem to old (version $_version)." >&6;}
+ { $as_echo "$as_me:${as_lineno-$LINENO}: Your boost libraries seem to old (version $_version)." >&5
+$as_echo "$as_me: Your boost libraries seem to old (version $_version)." >&6;}
fi
else
-cat >>confdefs.h <<\_ACEOF
-#define HAVE_BOOST
-_ACEOF
+$as_echo "#define HAVE_BOOST /**/" >>confdefs.h
fi
@@ -4605,24 +5456,19 @@ _ACEOF
fi
-echo "$as_me:$LINENO: checking whether the compiler implements namespaces" >&5
-echo $ECHO_N "checking whether the compiler implements namespaces... $ECHO_C" >&6
-if test "${ac_cv_cxx_namespaces+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking whether the compiler implements namespaces" >&5
+$as_echo_n "checking whether the compiler implements namespaces... " >&6; }
+if ${ac_cv_cxx_namespaces+:} false; then :
+ $as_echo_n "(cached) " >&6
else
-
- ac_ext=cc
+ ac_ext=cpp
ac_cpp='$CXXCPP $CPPFLAGS'
ac_compile='$CXX -c $CXXFLAGS $CPPFLAGS conftest.$ac_ext >&5'
ac_link='$CXX -o conftest$ac_exeext $CXXFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5'
ac_compiler_gnu=$ac_cv_cxx_compiler_gnu
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
+ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
/* end confdefs.h. */
namespace Outer { namespace Inner { int i = 0; }}
int
@@ -4633,37 +5479,13 @@ using namespace Outer::Inner; return i;
return 0;
}
_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_cxx_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
+if ac_fn_cxx_try_compile "$LINENO"; then :
ac_cv_cxx_namespaces=yes
else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-ac_cv_cxx_namespaces=no
+ ac_cv_cxx_namespaces=no
fi
-rm -f conftest.err conftest.$ac_objext conftest.$ac_ext
- ac_ext=cc
+rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
+ ac_ext=cpp
ac_cpp='$CXXCPP $CPPFLAGS'
ac_compile='$CXX -c $CXXFLAGS $CPPFLAGS conftest.$ac_ext >&5'
ac_link='$CXX -o conftest$ac_exeext $CXXFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5'
@@ -4671,19 +5493,16 @@ ac_compiler_gnu=$ac_cv_cxx_compiler_gnu
fi
-echo "$as_me:$LINENO: result: $ac_cv_cxx_namespaces" >&5
-echo "${ECHO_T}$ac_cv_cxx_namespaces" >&6
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_cxx_namespaces" >&5
+$as_echo "$ac_cv_cxx_namespaces" >&6; }
if test "$ac_cv_cxx_namespaces" = yes; then
-cat >>confdefs.h <<\_ACEOF
-#define HAVE_NAMESPACES
-_ACEOF
+$as_echo "#define HAVE_NAMESPACES /**/" >>confdefs.h
fi
-
-ac_ext=cc
+ac_ext=cpp
ac_cpp='$CXXCPP $CPPFLAGS'
ac_compile='$CXX -c $CXXFLAGS $CPPFLAGS conftest.$ac_ext >&5'
ac_link='$CXX -o conftest$ac_exeext $CXXFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5'
@@ -4701,16 +5520,12 @@ export LDFLAGS
CXXFLAGS="-pthread $CXXFLAGS"
-echo "$as_me:$LINENO: checking whether the Boost::Thread library is available" >&5
-echo $ECHO_N "checking whether the Boost::Thread library is available... $ECHO_C" >&6
-if test "${ax_cv_boost_thread+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking whether the Boost::Thread library is available" >&5
+$as_echo_n "checking whether the Boost::Thread library is available... " >&6; }
+if ${ax_cv_boost_thread+:} false; then :
+ $as_echo_n "(cached) " >&6
else
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
+ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
/* end confdefs.h. */
#include <boost/thread/thread.hpp>
int
@@ -4721,40 +5536,16 @@ boost::thread_group thrds; return 0;
return 0;
}
_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_cxx_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
+if ac_fn_cxx_try_compile "$LINENO"; then :
ax_cv_boost_thread=yes
else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-ax_cv_boost_thread=no
+ ax_cv_boost_thread=no
fi
-rm -f conftest.err conftest.$ac_objext conftest.$ac_ext
+rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
fi
-echo "$as_me:$LINENO: result: $ax_cv_boost_thread" >&5
-echo "${ECHO_T}$ax_cv_boost_thread" >&6
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ax_cv_boost_thread" >&5
+$as_echo "$ax_cv_boost_thread" >&6; }
if test "$ax_cv_boost_thread" = yes; then
@@ -4762,96 +5553,63 @@ if test "$ax_cv_boost_thread" = yes; then
-cat >>confdefs.h <<\_ACEOF
-#define HAVE_BOOST_THREAD
-_ACEOF
+$as_echo "#define HAVE_BOOST_THREAD /**/" >>confdefs.h
-# Check whether --with-boost-thread or --without-boost-thread was given.
-if test "${with_boost_thread+set}" = set; then
- withval="$with_boost_thread"
- if test "x$with_boost_thread" != "xno"; then
+# Check whether --with-boost-thread was given.
+if test "${with_boost_thread+set}" = set; then :
+ withval=$with_boost_thread; if test "x$with_boost_thread" != "xno"; then
ax_boost_thread_lib=boost_thread$with_boost_thread
fi
-fi;
+fi
+
for ax_lib in $ax_boost_thread_lib boost_thread boost_thread-mt; do
- as_ac_Lib=`echo "ac_cv_lib_$ax_lib''_main" | $as_tr_sh`
-echo "$as_me:$LINENO: checking for main in -l$ax_lib" >&5
-echo $ECHO_N "checking for main in -l$ax_lib... $ECHO_C" >&6
-if eval "test \"\${$as_ac_Lib+set}\" = set"; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
+ as_ac_Lib=`$as_echo "ac_cv_lib_$ax_lib''_main" | $as_tr_sh`
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for main in -l$ax_lib" >&5
+$as_echo_n "checking for main in -l$ax_lib... " >&6; }
+if eval \${$as_ac_Lib+:} false; then :
+ $as_echo_n "(cached) " >&6
else
ac_check_lib_save_LIBS=$LIBS
LIBS="-l$ax_lib $LIBS"
-cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
+cat confdefs.h - <<_ACEOF >conftest.$ac_ext
/* end confdefs.h. */
int
main ()
{
-main ();
+return main ();
;
return 0;
}
_ACEOF
-rm -f conftest.$ac_objext conftest$ac_exeext
-if { (eval echo "$as_me:$LINENO: \"$ac_link\"") >&5
- (eval $ac_link) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_cxx_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest$ac_exeext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
+if ac_fn_cxx_try_link "$LINENO"; then :
eval "$as_ac_Lib=yes"
else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-eval "$as_ac_Lib=no"
+ eval "$as_ac_Lib=no"
fi
-rm -f conftest.err conftest.$ac_objext \
- conftest$ac_exeext conftest.$ac_ext
+rm -f core conftest.err conftest.$ac_objext \
+ conftest$ac_exeext conftest.$ac_ext
LIBS=$ac_check_lib_save_LIBS
fi
-echo "$as_me:$LINENO: result: `eval echo '${'$as_ac_Lib'}'`" >&5
-echo "${ECHO_T}`eval echo '${'$as_ac_Lib'}'`" >&6
-if test `eval echo '${'$as_ac_Lib'}'` = yes; then
+eval ac_res=\$$as_ac_Lib
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_res" >&5
+$as_echo "$ac_res" >&6; }
+if eval test \"x\$"$as_ac_Lib"\" = x"yes"; then :
BOOST_THREAD_LIBS=-l$ax_lib; break
fi
done
# in recent Boost versions, boost::thread depends on boost::system
- echo "$as_me:$LINENO: checking whether Boost::Thread needs Boost::System library" >&5
-echo $ECHO_N "checking whether Boost::Thread needs Boost::System library... $ECHO_C" >&6
-if test "${ax_cv_boost_thread_system+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
+ { $as_echo "$as_me:${as_lineno-$LINENO}: checking whether Boost::Thread needs Boost::System library" >&5
+$as_echo_n "checking whether Boost::Thread needs Boost::System library... " >&6; }
+if ${ax_cv_boost_thread_system+:} false; then :
+ $as_echo_n "(cached) " >&6
else
LIBS="$LIBS $BOOST_THREAD_LIBS"
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
+ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
/* end confdefs.h. */
#include <boost/thread/thread.hpp>
int
@@ -4862,42 +5620,14 @@ boost::thread_group thrds; return 0;
return 0;
}
_ACEOF
-rm -f conftest.$ac_objext conftest$ac_exeext
-if { (eval echo "$as_me:$LINENO: \"$ac_link\"") >&5
- (eval $ac_link) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_cxx_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest$ac_exeext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
+if ac_fn_cxx_try_link "$LINENO"; then :
ax_cv_boost_thread_system=no
else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-LIBS="$LIBS $BOOST_THREAD_LIBS -lboost_system$with_boost_thread"
- cat >conftest.$ac_ext <<_ACEOF
-
- /* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
+ LIBS="$LIBS $BOOST_THREAD_LIBS -lboost_system$with_boost_thread"
+ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
/* end confdefs.h. */
-#include <boost/thread/thread.hpp>
+
+ #include <boost/thread/thread.hpp>
int
main ()
{
@@ -4907,52 +5637,26 @@ boost::thread_group thrds; return 0;
}
_ACEOF
-rm -f conftest.$ac_objext conftest$ac_exeext
-if { (eval echo "$as_me:$LINENO: \"$ac_link\"") >&5
- (eval $ac_link) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_cxx_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest$ac_exeext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
+if ac_fn_cxx_try_link "$LINENO"; then :
BOOST_THREAD_LIBS="$BOOST_THREAD_LIBS -lboost_system$with_boost_thread"
ax_cv_boost_thread_system=yes
else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-{ { echo "$as_me:$LINENO: error: Cannot use Boost::Thread" >&5
-echo "$as_me: error: Cannot use Boost::Thread" >&2;}
- { (exit 1); exit 1; }; }
+ as_fn_error $? "Cannot use Boost::Thread" "$LINENO" 5
fi
-rm -f conftest.err conftest.$ac_objext \
- conftest$ac_exeext conftest.$ac_ext
+rm -f core conftest.err conftest.$ac_objext \
+ conftest$ac_exeext conftest.$ac_ext
fi
-rm -f conftest.err conftest.$ac_objext \
- conftest$ac_exeext conftest.$ac_ext
+rm -f core conftest.err conftest.$ac_objext \
+ conftest$ac_exeext conftest.$ac_ext
fi
-echo "$as_me:$LINENO: result: $ax_cv_boost_thread_system" >&5
-echo "${ECHO_T}$ax_cv_boost_thread_system" >&6
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ax_cv_boost_thread_system" >&5
+$as_echo "$ax_cv_boost_thread_system" >&6; }
CXXFLAGS=$CXXFLAGS_SAVE
LIBS=$LIBS_SAVE
- ac_ext=cc
+ ac_ext=cpp
ac_cpp='$CXXCPP $CPPFLAGS'
ac_compile='$CXX -c $CXXFLAGS $CPPFLAGS conftest.$ac_ext >&5'
ac_link='$CXX -o conftest$ac_exeext $CXXFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5'
@@ -4965,14 +5669,10 @@ CPPFLAGS="$CPPFLAGS_SAVED"
LDFLAGS="$LDFLAGS_SAVED"
if test -z "$BOOST_THREAD_LIBS"; then
- { { echo "$as_me:$LINENO: error: boost.thread not found. Aborting." >&5
-echo "$as_me: error: boost.thread not found. Aborting." >&2;}
- { (exit 1); exit 1; }; }
+ as_fn_error $? "boost.thread not found. Aborting." "$LINENO" 5
fi
-
-
# BAM related:
ac_bam_path=samtools-0.1.18
BAM_LIB="-lbam"
@@ -4984,16 +5684,16 @@ fi
# Checks for header files.
-ac_ext=cc
+ac_ext=cpp
ac_cpp='$CXXCPP $CPPFLAGS'
ac_compile='$CXX -c $CXXFLAGS $CPPFLAGS conftest.$ac_ext >&5'
ac_link='$CXX -o conftest$ac_exeext $CXXFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5'
ac_compiler_gnu=$ac_cv_cxx_compiler_gnu
-echo "$as_me:$LINENO: checking how to run the C++ preprocessor" >&5
-echo $ECHO_N "checking how to run the C++ preprocessor... $ECHO_C" >&6
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking how to run the C++ preprocessor" >&5
+$as_echo_n "checking how to run the C++ preprocessor... " >&6; }
if test -z "$CXXCPP"; then
- if test "${ac_cv_prog_CXXCPP+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
+ if ${ac_cv_prog_CXXCPP+:} false; then :
+ $as_echo_n "(cached) " >&6
else
# Double quotes because CXXCPP needs to be expanded
for CXXCPP in "$CXX -E" "/lib/cpp"
@@ -5007,11 +5707,7 @@ do
# <limits.h> exists even on freestanding compilers.
# On the NeXT, cc -E runs the code through the compiler's parser,
# not just through cpp. "Syntax error" is here to catch this case.
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
+ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
/* end confdefs.h. */
#ifdef __STDC__
# include <limits.h>
@@ -5020,78 +5716,34 @@ cat >>conftest.$ac_ext <<_ACEOF
#endif
Syntax error
_ACEOF
-if { (eval echo "$as_me:$LINENO: \"$ac_cpp conftest.$ac_ext\"") >&5
- (eval $ac_cpp conftest.$ac_ext) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } >/dev/null; then
- if test -s conftest.err; then
- ac_cpp_err=$ac_cxx_preproc_warn_flag
- ac_cpp_err=$ac_cpp_err$ac_cxx_werror_flag
- else
- ac_cpp_err=
- fi
-else
- ac_cpp_err=yes
-fi
-if test -z "$ac_cpp_err"; then
- :
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
+if ac_fn_cxx_try_cpp "$LINENO"; then :
+else
# Broken: fails on valid input.
continue
fi
-rm -f conftest.err conftest.$ac_ext
+rm -f conftest.err conftest.i conftest.$ac_ext
- # OK, works on sane cases. Now check whether non-existent headers
+ # OK, works on sane cases. Now check whether nonexistent headers
# can be detected and how.
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
+ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
/* end confdefs.h. */
#include <ac_nonexistent.h>
_ACEOF
-if { (eval echo "$as_me:$LINENO: \"$ac_cpp conftest.$ac_ext\"") >&5
- (eval $ac_cpp conftest.$ac_ext) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } >/dev/null; then
- if test -s conftest.err; then
- ac_cpp_err=$ac_cxx_preproc_warn_flag
- ac_cpp_err=$ac_cpp_err$ac_cxx_werror_flag
- else
- ac_cpp_err=
- fi
-else
- ac_cpp_err=yes
-fi
-if test -z "$ac_cpp_err"; then
+if ac_fn_cxx_try_cpp "$LINENO"; then :
# Broken: success on invalid input.
continue
else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
# Passes both tests.
ac_preproc_ok=:
break
fi
-rm -f conftest.err conftest.$ac_ext
+rm -f conftest.err conftest.i conftest.$ac_ext
done
# Because of `break', _AC_PREPROC_IFELSE's cleaning code was skipped.
-rm -f conftest.err conftest.$ac_ext
-if $ac_preproc_ok; then
+rm -f conftest.i conftest.err conftest.$ac_ext
+if $ac_preproc_ok; then :
break
fi
@@ -5103,8 +5755,8 @@ fi
else
ac_cv_prog_CXXCPP=$CXXCPP
fi
-echo "$as_me:$LINENO: result: $CXXCPP" >&5
-echo "${ECHO_T}$CXXCPP" >&6
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $CXXCPP" >&5
+$as_echo "$CXXCPP" >&6; }
ac_preproc_ok=false
for ac_cxx_preproc_warn_flag in '' yes
do
@@ -5114,11 +5766,7 @@ do
# <limits.h> exists even on freestanding compilers.
# On the NeXT, cc -E runs the code through the compiler's parser,
# not just through cpp. "Syntax error" is here to catch this case.
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
+ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
/* end confdefs.h. */
#ifdef __STDC__
# include <limits.h>
@@ -5127,119 +5775,185 @@ cat >>conftest.$ac_ext <<_ACEOF
#endif
Syntax error
_ACEOF
-if { (eval echo "$as_me:$LINENO: \"$ac_cpp conftest.$ac_ext\"") >&5
- (eval $ac_cpp conftest.$ac_ext) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } >/dev/null; then
- if test -s conftest.err; then
- ac_cpp_err=$ac_cxx_preproc_warn_flag
- ac_cpp_err=$ac_cpp_err$ac_cxx_werror_flag
- else
- ac_cpp_err=
- fi
-else
- ac_cpp_err=yes
-fi
-if test -z "$ac_cpp_err"; then
- :
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
+if ac_fn_cxx_try_cpp "$LINENO"; then :
+else
# Broken: fails on valid input.
continue
fi
-rm -f conftest.err conftest.$ac_ext
+rm -f conftest.err conftest.i conftest.$ac_ext
- # OK, works on sane cases. Now check whether non-existent headers
+ # OK, works on sane cases. Now check whether nonexistent headers
# can be detected and how.
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
+ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
/* end confdefs.h. */
#include <ac_nonexistent.h>
_ACEOF
-if { (eval echo "$as_me:$LINENO: \"$ac_cpp conftest.$ac_ext\"") >&5
- (eval $ac_cpp conftest.$ac_ext) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } >/dev/null; then
- if test -s conftest.err; then
- ac_cpp_err=$ac_cxx_preproc_warn_flag
- ac_cpp_err=$ac_cpp_err$ac_cxx_werror_flag
- else
- ac_cpp_err=
- fi
-else
- ac_cpp_err=yes
-fi
-if test -z "$ac_cpp_err"; then
+if ac_fn_cxx_try_cpp "$LINENO"; then :
# Broken: success on invalid input.
continue
else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
# Passes both tests.
ac_preproc_ok=:
break
fi
-rm -f conftest.err conftest.$ac_ext
+rm -f conftest.err conftest.i conftest.$ac_ext
done
# Because of `break', _AC_PREPROC_IFELSE's cleaning code was skipped.
-rm -f conftest.err conftest.$ac_ext
-if $ac_preproc_ok; then
- :
+rm -f conftest.i conftest.err conftest.$ac_ext
+if $ac_preproc_ok; then :
+
else
- { { echo "$as_me:$LINENO: error: C++ preprocessor \"$CXXCPP\" fails sanity check
-See \`config.log' for more details." >&5
-echo "$as_me: error: C++ preprocessor \"$CXXCPP\" fails sanity check
-See \`config.log' for more details." >&2;}
- { (exit 1); exit 1; }; }
+ { { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
+$as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
+as_fn_error $? "C++ preprocessor \"$CXXCPP\" fails sanity check
+See \`config.log' for more details" "$LINENO" 5; }
fi
-ac_ext=cc
+ac_ext=cpp
ac_cpp='$CXXCPP $CPPFLAGS'
ac_compile='$CXX -c $CXXFLAGS $CPPFLAGS conftest.$ac_ext >&5'
ac_link='$CXX -o conftest$ac_exeext $CXXFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5'
ac_compiler_gnu=$ac_cv_cxx_compiler_gnu
-echo "$as_me:$LINENO: checking for egrep" >&5
-echo $ECHO_N "checking for egrep... $ECHO_C" >&6
-if test "${ac_cv_prog_egrep+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for grep that handles long lines and -e" >&5
+$as_echo_n "checking for grep that handles long lines and -e... " >&6; }
+if ${ac_cv_path_GREP+:} false; then :
+ $as_echo_n "(cached) " >&6
else
- if echo a | (grep -E '(a|b)') >/dev/null 2>&1
- then ac_cv_prog_egrep='grep -E'
- else ac_cv_prog_egrep='egrep'
+ if test -z "$GREP"; then
+ ac_path_GREP_found=false
+ # Loop through the user's path and test for each of PROGNAME-LIST
+ as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
+for as_dir in $PATH$PATH_SEPARATOR/usr/xpg4/bin
+do
+ IFS=$as_save_IFS
+ test -z "$as_dir" && as_dir=.
+ for ac_prog in grep ggrep; do
+ for ac_exec_ext in '' $ac_executable_extensions; do
+ ac_path_GREP="$as_dir/$ac_prog$ac_exec_ext"
+ as_fn_executable_p "$ac_path_GREP" || continue
+# Check for GNU ac_path_GREP and select it if it is found.
+ # Check for GNU $ac_path_GREP
+case `"$ac_path_GREP" --version 2>&1` in
+*GNU*)
+ ac_cv_path_GREP="$ac_path_GREP" ac_path_GREP_found=:;;
+*)
+ ac_count=0
+ $as_echo_n 0123456789 >"conftest.in"
+ while :
+ do
+ cat "conftest.in" "conftest.in" >"conftest.tmp"
+ mv "conftest.tmp" "conftest.in"
+ cp "conftest.in" "conftest.nl"
+ $as_echo 'GREP' >> "conftest.nl"
+ "$ac_path_GREP" -e 'GREP$' -e '-(cannot match)-' < "conftest.nl" >"conftest.out" 2>/dev/null || break
+ diff "conftest.out" "conftest.nl" >/dev/null 2>&1 || break
+ as_fn_arith $ac_count + 1 && ac_count=$as_val
+ if test $ac_count -gt ${ac_path_GREP_max-0}; then
+ # Best one so far, save it but keep looking for a better one
+ ac_cv_path_GREP="$ac_path_GREP"
+ ac_path_GREP_max=$ac_count
fi
+ # 10*(2^10) chars as input seems more than enough
+ test $ac_count -gt 10 && break
+ done
+ rm -f conftest.in conftest.tmp conftest.nl conftest.out;;
+esac
+
+ $ac_path_GREP_found && break 3
+ done
+ done
+ done
+IFS=$as_save_IFS
+ if test -z "$ac_cv_path_GREP"; then
+ as_fn_error $? "no acceptable grep could be found in $PATH$PATH_SEPARATOR/usr/xpg4/bin" "$LINENO" 5
+ fi
+else
+ ac_cv_path_GREP=$GREP
+fi
+
fi
-echo "$as_me:$LINENO: result: $ac_cv_prog_egrep" >&5
-echo "${ECHO_T}$ac_cv_prog_egrep" >&6
- EGREP=$ac_cv_prog_egrep
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_path_GREP" >&5
+$as_echo "$ac_cv_path_GREP" >&6; }
+ GREP="$ac_cv_path_GREP"
-echo "$as_me:$LINENO: checking for ANSI C header files" >&5
-echo $ECHO_N "checking for ANSI C header files... $ECHO_C" >&6
-if test "${ac_cv_header_stdc+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for egrep" >&5
+$as_echo_n "checking for egrep... " >&6; }
+if ${ac_cv_path_EGREP+:} false; then :
+ $as_echo_n "(cached) " >&6
else
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
+ if echo a | $GREP -E '(a|b)' >/dev/null 2>&1
+ then ac_cv_path_EGREP="$GREP -E"
+ else
+ if test -z "$EGREP"; then
+ ac_path_EGREP_found=false
+ # Loop through the user's path and test for each of PROGNAME-LIST
+ as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
+for as_dir in $PATH$PATH_SEPARATOR/usr/xpg4/bin
+do
+ IFS=$as_save_IFS
+ test -z "$as_dir" && as_dir=.
+ for ac_prog in egrep; do
+ for ac_exec_ext in '' $ac_executable_extensions; do
+ ac_path_EGREP="$as_dir/$ac_prog$ac_exec_ext"
+ as_fn_executable_p "$ac_path_EGREP" || continue
+# Check for GNU ac_path_EGREP and select it if it is found.
+ # Check for GNU $ac_path_EGREP
+case `"$ac_path_EGREP" --version 2>&1` in
+*GNU*)
+ ac_cv_path_EGREP="$ac_path_EGREP" ac_path_EGREP_found=:;;
+*)
+ ac_count=0
+ $as_echo_n 0123456789 >"conftest.in"
+ while :
+ do
+ cat "conftest.in" "conftest.in" >"conftest.tmp"
+ mv "conftest.tmp" "conftest.in"
+ cp "conftest.in" "conftest.nl"
+ $as_echo 'EGREP' >> "conftest.nl"
+ "$ac_path_EGREP" 'EGREP$' < "conftest.nl" >"conftest.out" 2>/dev/null || break
+ diff "conftest.out" "conftest.nl" >/dev/null 2>&1 || break
+ as_fn_arith $ac_count + 1 && ac_count=$as_val
+ if test $ac_count -gt ${ac_path_EGREP_max-0}; then
+ # Best one so far, save it but keep looking for a better one
+ ac_cv_path_EGREP="$ac_path_EGREP"
+ ac_path_EGREP_max=$ac_count
+ fi
+ # 10*(2^10) chars as input seems more than enough
+ test $ac_count -gt 10 && break
+ done
+ rm -f conftest.in conftest.tmp conftest.nl conftest.out;;
+esac
+
+ $ac_path_EGREP_found && break 3
+ done
+ done
+ done
+IFS=$as_save_IFS
+ if test -z "$ac_cv_path_EGREP"; then
+ as_fn_error $? "no acceptable egrep could be found in $PATH$PATH_SEPARATOR/usr/xpg4/bin" "$LINENO" 5
+ fi
+else
+ ac_cv_path_EGREP=$EGREP
+fi
+
+ fi
+fi
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_path_EGREP" >&5
+$as_echo "$ac_cv_path_EGREP" >&6; }
+ EGREP="$ac_cv_path_EGREP"
+
+
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for ANSI C header files" >&5
+$as_echo_n "checking for ANSI C header files... " >&6; }
+if ${ac_cv_header_stdc+:} false; then :
+ $as_echo_n "(cached) " >&6
+else
+ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
/* end confdefs.h. */
#include <stdlib.h>
#include <stdarg.h>
@@ -5254,51 +5968,23 @@ main ()
return 0;
}
_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_cxx_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
+if ac_fn_cxx_try_compile "$LINENO"; then :
ac_cv_header_stdc=yes
else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-ac_cv_header_stdc=no
+ ac_cv_header_stdc=no
fi
-rm -f conftest.err conftest.$ac_objext conftest.$ac_ext
+rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
if test $ac_cv_header_stdc = yes; then
# SunOS 4.x string.h does not declare mem*, contrary to ANSI.
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
+ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
/* end confdefs.h. */
#include <string.h>
_ACEOF
if (eval "$ac_cpp conftest.$ac_ext") 2>&5 |
- $EGREP "memchr" >/dev/null 2>&1; then
- :
+ $EGREP "memchr" >/dev/null 2>&1; then :
+
else
ac_cv_header_stdc=no
fi
@@ -5308,18 +5994,14 @@ fi
if test $ac_cv_header_stdc = yes; then
# ISC 2.0.2 stdlib.h does not declare free, contrary to ANSI.
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
+ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
/* end confdefs.h. */
#include <stdlib.h>
_ACEOF
if (eval "$ac_cpp conftest.$ac_ext") 2>&5 |
- $EGREP "free" >/dev/null 2>&1; then
- :
+ $EGREP "free" >/dev/null 2>&1; then :
+
else
ac_cv_header_stdc=no
fi
@@ -5329,16 +6011,13 @@ fi
if test $ac_cv_header_stdc = yes; then
# /bin/cc in Irix-4.0.5 gets non-ANSI ctype macros unless using -ansi.
- if test "$cross_compiling" = yes; then
+ if test "$cross_compiling" = yes; then :
:
else
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
+ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
/* end confdefs.h. */
#include <ctype.h>
+#include <stdlib.h>
#if ((' ' & 0x0FF) == 0x020)
# define ISLOWER(c) ('a' <= (c) && (c) <= 'z')
# define TOUPPER(c) (ISLOWER(c) ? 'A' + ((c) - 'a') : (c))
@@ -5358,109 +6037,39 @@ main ()
for (i = 0; i < 256; i++)
if (XOR (islower (i), ISLOWER (i))
|| toupper (i) != TOUPPER (i))
- exit(2);
- exit (0);
+ return 2;
+ return 0;
}
_ACEOF
-rm -f conftest$ac_exeext
-if { (eval echo "$as_me:$LINENO: \"$ac_link\"") >&5
- (eval $ac_link) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } && { ac_try='./conftest$ac_exeext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
- :
-else
- echo "$as_me: program exited with status $ac_status" >&5
-echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
+if ac_fn_cxx_try_run "$LINENO"; then :
-( exit $ac_status )
-ac_cv_header_stdc=no
+else
+ ac_cv_header_stdc=no
fi
-rm -f core *.core gmon.out bb.out conftest$ac_exeext conftest.$ac_objext conftest.$ac_ext
+rm -f core *.core core.conftest.* gmon.out bb.out conftest$ac_exeext \
+ conftest.$ac_objext conftest.beam conftest.$ac_ext
fi
+
fi
fi
-echo "$as_me:$LINENO: result: $ac_cv_header_stdc" >&5
-echo "${ECHO_T}$ac_cv_header_stdc" >&6
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_header_stdc" >&5
+$as_echo "$ac_cv_header_stdc" >&6; }
if test $ac_cv_header_stdc = yes; then
-cat >>confdefs.h <<\_ACEOF
-#define STDC_HEADERS 1
-_ACEOF
+$as_echo "#define STDC_HEADERS 1" >>confdefs.h
fi
# On IRIX 5.3, sys/types and inttypes.h are conflicting.
-
-
-
-
-
-
-
-
-
for ac_header in sys/types.h sys/stat.h stdlib.h string.h memory.h strings.h \
inttypes.h stdint.h unistd.h
-do
-as_ac_Header=`echo "ac_cv_header_$ac_header" | $as_tr_sh`
-echo "$as_me:$LINENO: checking for $ac_header" >&5
-echo $ECHO_N "checking for $ac_header... $ECHO_C" >&6
-if eval "test \"\${$as_ac_Header+set}\" = set"; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-$ac_includes_default
-
-#include <$ac_header>
-_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_cxx_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
- eval "$as_ac_Header=yes"
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-eval "$as_ac_Header=no"
-fi
-rm -f conftest.err conftest.$ac_objext conftest.$ac_ext
-fi
-echo "$as_me:$LINENO: result: `eval echo '${'$as_ac_Header'}'`" >&5
-echo "${ECHO_T}`eval echo '${'$as_ac_Header'}'`" >&6
-if test `eval echo '${'$as_ac_Header'}'` = yes; then
+do :
+ as_ac_Header=`$as_echo "ac_cv_header_$ac_header" | $as_tr_sh`
+ac_fn_cxx_check_header_compile "$LINENO" "$ac_header" "$as_ac_Header" "$ac_includes_default
+"
+if eval test \"x\$"$as_ac_Header"\" = x"yes"; then :
cat >>confdefs.h <<_ACEOF
-#define `echo "HAVE_$ac_header" | $as_tr_cpp` 1
+#define `$as_echo "HAVE_$ac_header" | $as_tr_cpp` 1
_ACEOF
fi
@@ -5468,152 +6077,13 @@ fi
done
-
-
-
for ac_header in stdlib.h string.h unistd.h
-do
-as_ac_Header=`echo "ac_cv_header_$ac_header" | $as_tr_sh`
-if eval "test \"\${$as_ac_Header+set}\" = set"; then
- echo "$as_me:$LINENO: checking for $ac_header" >&5
-echo $ECHO_N "checking for $ac_header... $ECHO_C" >&6
-if eval "test \"\${$as_ac_Header+set}\" = set"; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-fi
-echo "$as_me:$LINENO: result: `eval echo '${'$as_ac_Header'}'`" >&5
-echo "${ECHO_T}`eval echo '${'$as_ac_Header'}'`" >&6
-else
- # Is the header compilable?
-echo "$as_me:$LINENO: checking $ac_header usability" >&5
-echo $ECHO_N "checking $ac_header usability... $ECHO_C" >&6
-cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-$ac_includes_default
-#include <$ac_header>
-_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_cxx_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
- ac_header_compiler=yes
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-ac_header_compiler=no
-fi
-rm -f conftest.err conftest.$ac_objext conftest.$ac_ext
-echo "$as_me:$LINENO: result: $ac_header_compiler" >&5
-echo "${ECHO_T}$ac_header_compiler" >&6
-
-# Is the header present?
-echo "$as_me:$LINENO: checking $ac_header presence" >&5
-echo $ECHO_N "checking $ac_header presence... $ECHO_C" >&6
-cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-#include <$ac_header>
-_ACEOF
-if { (eval echo "$as_me:$LINENO: \"$ac_cpp conftest.$ac_ext\"") >&5
- (eval $ac_cpp conftest.$ac_ext) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } >/dev/null; then
- if test -s conftest.err; then
- ac_cpp_err=$ac_cxx_preproc_warn_flag
- ac_cpp_err=$ac_cpp_err$ac_cxx_werror_flag
- else
- ac_cpp_err=
- fi
-else
- ac_cpp_err=yes
-fi
-if test -z "$ac_cpp_err"; then
- ac_header_preproc=yes
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
- ac_header_preproc=no
-fi
-rm -f conftest.err conftest.$ac_ext
-echo "$as_me:$LINENO: result: $ac_header_preproc" >&5
-echo "${ECHO_T}$ac_header_preproc" >&6
-
-# So? What about this header?
-case $ac_header_compiler:$ac_header_preproc:$ac_cxx_preproc_warn_flag in
- yes:no: )
- { echo "$as_me:$LINENO: WARNING: $ac_header: accepted by the compiler, rejected by the preprocessor!" >&5
-echo "$as_me: WARNING: $ac_header: accepted by the compiler, rejected by the preprocessor!" >&2;}
- { echo "$as_me:$LINENO: WARNING: $ac_header: proceeding with the compiler's result" >&5
-echo "$as_me: WARNING: $ac_header: proceeding with the compiler's result" >&2;}
- ac_header_preproc=yes
- ;;
- no:yes:* )
- { echo "$as_me:$LINENO: WARNING: $ac_header: present but cannot be compiled" >&5
-echo "$as_me: WARNING: $ac_header: present but cannot be compiled" >&2;}
- { echo "$as_me:$LINENO: WARNING: $ac_header: check for missing prerequisite headers?" >&5
-echo "$as_me: WARNING: $ac_header: check for missing prerequisite headers?" >&2;}
- { echo "$as_me:$LINENO: WARNING: $ac_header: see the Autoconf documentation" >&5
-echo "$as_me: WARNING: $ac_header: see the Autoconf documentation" >&2;}
- { echo "$as_me:$LINENO: WARNING: $ac_header: section \"Present But Cannot Be Compiled\"" >&5
-echo "$as_me: WARNING: $ac_header: section \"Present But Cannot Be Compiled\"" >&2;}
- { echo "$as_me:$LINENO: WARNING: $ac_header: proceeding with the preprocessor's result" >&5
-echo "$as_me: WARNING: $ac_header: proceeding with the preprocessor's result" >&2;}
- { echo "$as_me:$LINENO: WARNING: $ac_header: in the future, the compiler will take precedence" >&5
-echo "$as_me: WARNING: $ac_header: in the future, the compiler will take precedence" >&2;}
- (
- cat <<\_ASBOX
-## ----------------------------------------- ##
-## Report this to tophat.cufflinks at gmail.com ##
-## ----------------------------------------- ##
-_ASBOX
- ) |
- sed "s/^/$as_me: WARNING: /" >&2
- ;;
-esac
-echo "$as_me:$LINENO: checking for $ac_header" >&5
-echo $ECHO_N "checking for $ac_header... $ECHO_C" >&6
-if eval "test \"\${$as_ac_Header+set}\" = set"; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- eval "$as_ac_Header=\$ac_header_preproc"
-fi
-echo "$as_me:$LINENO: result: `eval echo '${'$as_ac_Header'}'`" >&5
-echo "${ECHO_T}`eval echo '${'$as_ac_Header'}'`" >&6
-
-fi
-if test `eval echo '${'$as_ac_Header'}'` = yes; then
+do :
+ as_ac_Header=`$as_echo "ac_cv_header_$ac_header" | $as_tr_sh`
+ac_fn_cxx_check_header_mongrel "$LINENO" "$ac_header" "$as_ac_Header" "$ac_includes_default"
+if eval test \"x\$"$as_ac_Header"\" = x"yes"; then :
cat >>confdefs.h <<_ACEOF
-#define `echo "HAVE_$ac_header" | $as_tr_cpp` 1
+#define `$as_echo "HAVE_$ac_header" | $as_tr_cpp` 1
_ACEOF
fi
@@ -5622,16 +6092,12 @@ done
# Checks for header files.
-echo "$as_me:$LINENO: checking for ANSI C header files" >&5
-echo $ECHO_N "checking for ANSI C header files... $ECHO_C" >&6
-if test "${ac_cv_header_stdc+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for ANSI C header files" >&5
+$as_echo_n "checking for ANSI C header files... " >&6; }
+if ${ac_cv_header_stdc+:} false; then :
+ $as_echo_n "(cached) " >&6
else
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
+ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
/* end confdefs.h. */
#include <stdlib.h>
#include <stdarg.h>
@@ -5646,51 +6112,23 @@ main ()
return 0;
}
_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_cxx_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
+if ac_fn_cxx_try_compile "$LINENO"; then :
ac_cv_header_stdc=yes
else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-ac_cv_header_stdc=no
+ ac_cv_header_stdc=no
fi
-rm -f conftest.err conftest.$ac_objext conftest.$ac_ext
+rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
if test $ac_cv_header_stdc = yes; then
# SunOS 4.x string.h does not declare mem*, contrary to ANSI.
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
+ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
/* end confdefs.h. */
#include <string.h>
_ACEOF
if (eval "$ac_cpp conftest.$ac_ext") 2>&5 |
- $EGREP "memchr" >/dev/null 2>&1; then
- :
+ $EGREP "memchr" >/dev/null 2>&1; then :
+
else
ac_cv_header_stdc=no
fi
@@ -5700,18 +6138,14 @@ fi
if test $ac_cv_header_stdc = yes; then
# ISC 2.0.2 stdlib.h does not declare free, contrary to ANSI.
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
+ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
/* end confdefs.h. */
#include <stdlib.h>
_ACEOF
if (eval "$ac_cpp conftest.$ac_ext") 2>&5 |
- $EGREP "free" >/dev/null 2>&1; then
- :
+ $EGREP "free" >/dev/null 2>&1; then :
+
else
ac_cv_header_stdc=no
fi
@@ -5721,16 +6155,13 @@ fi
if test $ac_cv_header_stdc = yes; then
# /bin/cc in Irix-4.0.5 gets non-ANSI ctype macros unless using -ansi.
- if test "$cross_compiling" = yes; then
+ if test "$cross_compiling" = yes; then :
:
else
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
+ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
/* end confdefs.h. */
#include <ctype.h>
+#include <stdlib.h>
#if ((' ' & 0x0FF) == 0x020)
# define ISLOWER(c) ('a' <= (c) && (c) <= 'z')
# define TOUPPER(c) (ISLOWER(c) ? 'A' + ((c) - 'a') : (c))
@@ -5750,188 +6181,109 @@ main ()
for (i = 0; i < 256; i++)
if (XOR (islower (i), ISLOWER (i))
|| toupper (i) != TOUPPER (i))
- exit(2);
- exit (0);
+ return 2;
+ return 0;
}
_ACEOF
-rm -f conftest$ac_exeext
-if { (eval echo "$as_me:$LINENO: \"$ac_link\"") >&5
- (eval $ac_link) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } && { ac_try='./conftest$ac_exeext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
- :
-else
- echo "$as_me: program exited with status $ac_status" >&5
-echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
+if ac_fn_cxx_try_run "$LINENO"; then :
-( exit $ac_status )
-ac_cv_header_stdc=no
+else
+ ac_cv_header_stdc=no
fi
-rm -f core *.core gmon.out bb.out conftest$ac_exeext conftest.$ac_objext conftest.$ac_ext
+rm -f core *.core core.conftest.* gmon.out bb.out conftest$ac_exeext \
+ conftest.$ac_objext conftest.beam conftest.$ac_ext
fi
+
fi
fi
-echo "$as_me:$LINENO: result: $ac_cv_header_stdc" >&5
-echo "${ECHO_T}$ac_cv_header_stdc" >&6
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_header_stdc" >&5
+$as_echo "$ac_cv_header_stdc" >&6; }
if test $ac_cv_header_stdc = yes; then
-cat >>confdefs.h <<\_ACEOF
-#define STDC_HEADERS 1
-_ACEOF
+$as_echo "#define STDC_HEADERS 1" >>confdefs.h
fi
# Checks for typedefs, structures, and compiler characteristics.
-echo "$as_me:$LINENO: checking for stdbool.h that conforms to C99" >&5
-echo $ECHO_N "checking for stdbool.h that conforms to C99... $ECHO_C" >&6
-if test "${ac_cv_header_stdbool_h+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for stdbool.h that conforms to C99" >&5
+$as_echo_n "checking for stdbool.h that conforms to C99... " >&6; }
+if ${ac_cv_header_stdbool_h+:} false; then :
+ $as_echo_n "(cached) " >&6
else
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
+ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
/* end confdefs.h. */
-#include <stdbool.h>
-#ifndef bool
-# error bool is not defined
-#endif
-#ifndef false
-# error false is not defined
-#endif
-#if false
-# error false is not 0
-#endif
-#ifndef true
-# error true is not defined
-#endif
-#if true != 1
-# error true is not 1
-#endif
-#ifndef __bool_true_false_are_defined
-# error __bool_true_false_are_defined is not defined
-#endif
-
- struct s { _Bool s: 1; _Bool t; } s;
-
- char a[true == 1 ? 1 : -1];
- char b[false == 0 ? 1 : -1];
- char c[__bool_true_false_are_defined == 1 ? 1 : -1];
- char d[(bool) -0.5 == true ? 1 : -1];
- bool e = &s;
- char f[(_Bool) -0.0 == false ? 1 : -1];
- char g[true];
- char h[sizeof (_Bool)];
- char i[sizeof s.t];
+ #include <stdbool.h>
+ #ifndef bool
+ "error: bool is not defined"
+ #endif
+ #ifndef false
+ "error: false is not defined"
+ #endif
+ #if false
+ "error: false is not 0"
+ #endif
+ #ifndef true
+ "error: true is not defined"
+ #endif
+ #if true != 1
+ "error: true is not 1"
+ #endif
+ #ifndef __bool_true_false_are_defined
+ "error: __bool_true_false_are_defined is not defined"
+ #endif
+
+ struct s { _Bool s: 1; _Bool t; } s;
+
+ char a[true == 1 ? 1 : -1];
+ char b[false == 0 ? 1 : -1];
+ char c[__bool_true_false_are_defined == 1 ? 1 : -1];
+ char d[(bool) 0.5 == true ? 1 : -1];
+ /* See body of main program for 'e'. */
+ char f[(_Bool) 0.0 == false ? 1 : -1];
+ char g[true];
+ char h[sizeof (_Bool)];
+ char i[sizeof s.t];
+ enum { j = false, k = true, l = false * true, m = true * 256 };
+ /* The following fails for
+ HP aC++/ANSI C B3910B A.05.55 [Dec 04 2003]. */
+ _Bool n[m];
+ char o[sizeof n == m * sizeof n[0] ? 1 : -1];
+ char p[-1 - (_Bool) 0 < 0 && -1 - (bool) 0 < 0 ? 1 : -1];
+ /* Catch a bug in an HP-UX C compiler. See
+ http://gcc.gnu.org/ml/gcc-patches/2003-12/msg02303.html
+ http://lists.gnu.org/archive/html/bug-coreutils/2005-11/msg00161.html
+ */
+ _Bool q = true;
+ _Bool *pq = &q;
int
main ()
{
- return !a + !b + !c + !d + !e + !f + !g + !h + !i;
- ;
- return 0;
-}
-_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_cxx_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
- ac_cv_header_stdbool_h=yes
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-ac_cv_header_stdbool_h=no
-fi
-rm -f conftest.err conftest.$ac_objext conftest.$ac_ext
-fi
-echo "$as_me:$LINENO: result: $ac_cv_header_stdbool_h" >&5
-echo "${ECHO_T}$ac_cv_header_stdbool_h" >&6
-echo "$as_me:$LINENO: checking for _Bool" >&5
-echo $ECHO_N "checking for _Bool... $ECHO_C" >&6
-if test "${ac_cv_type__Bool+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-$ac_includes_default
-int
-main ()
-{
-if ((_Bool *) 0)
- return 0;
-if (sizeof (_Bool))
- return 0;
+ bool e = &s;
+ *pq |= q;
+ *pq |= ! q;
+ /* Refer to every declared value, to avoid compiler optimizations. */
+ return (!a + !b + !c + !d + !e + !f + !g + !h + !i + !!j + !k + !!l
+ + !m + !n + !o + !p + !q + !pq);
+
;
return 0;
}
_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_cxx_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
- ac_cv_type__Bool=yes
+if ac_fn_cxx_try_compile "$LINENO"; then :
+ ac_cv_header_stdbool_h=yes
else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-ac_cv_type__Bool=no
+ ac_cv_header_stdbool_h=no
fi
-rm -f conftest.err conftest.$ac_objext conftest.$ac_ext
+rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
fi
-echo "$as_me:$LINENO: result: $ac_cv_type__Bool" >&5
-echo "${ECHO_T}$ac_cv_type__Bool" >&6
-if test $ac_cv_type__Bool = yes; then
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_header_stdbool_h" >&5
+$as_echo "$ac_cv_header_stdbool_h" >&6; }
+ ac_fn_cxx_check_type "$LINENO" "_Bool" "ac_cv_type__Bool" "$ac_includes_default"
+if test "x$ac_cv_type__Bool" = xyes; then :
cat >>confdefs.h <<_ACEOF
#define HAVE__BOOL 1
@@ -5940,26 +6292,21 @@ _ACEOF
fi
+
if test $ac_cv_header_stdbool_h = yes; then
-cat >>confdefs.h <<\_ACEOF
-#define HAVE_STDBOOL_H 1
-_ACEOF
+$as_echo "#define HAVE_STDBOOL_H 1" >>confdefs.h
fi
-echo "$as_me:$LINENO: checking for inline" >&5
-echo $ECHO_N "checking for inline... $ECHO_C" >&6
-if test "${ac_cv_c_inline+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for inline" >&5
+$as_echo_n "checking for inline... " >&6; }
+if ${ac_cv_c_inline+:} false; then :
+ $as_echo_n "(cached) " >&6
else
ac_cv_c_inline=no
for ac_kw in inline __inline__ __inline; do
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
+ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
/* end confdefs.h. */
#ifndef __cplusplus
typedef int foo_t;
@@ -5968,41 +6315,16 @@ $ac_kw foo_t foo () {return 0; }
#endif
_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_cxx_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
- ac_cv_c_inline=$ac_kw; break
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
+if ac_fn_cxx_try_compile "$LINENO"; then :
+ ac_cv_c_inline=$ac_kw
fi
-rm -f conftest.err conftest.$ac_objext conftest.$ac_ext
+rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
+ test "$ac_cv_c_inline" != no && break
done
fi
-echo "$as_me:$LINENO: result: $ac_cv_c_inline" >&5
-echo "${ECHO_T}$ac_cv_c_inline" >&6
-
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_c_inline" >&5
+$as_echo "$ac_cv_c_inline" >&6; }
case $ac_cv_c_inline in
inline | yes) ;;
@@ -6019,64 +6341,9 @@ _ACEOF
;;
esac
-echo "$as_me:$LINENO: checking for pid_t" >&5
-echo $ECHO_N "checking for pid_t... $ECHO_C" >&6
-if test "${ac_cv_type_pid_t+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-$ac_includes_default
-int
-main ()
-{
-if ((pid_t *) 0)
- return 0;
-if (sizeof (pid_t))
- return 0;
- ;
- return 0;
-}
-_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_cxx_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
- ac_cv_type_pid_t=yes
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
+ac_fn_cxx_check_type "$LINENO" "pid_t" "ac_cv_type_pid_t" "$ac_includes_default"
+if test "x$ac_cv_type_pid_t" = xyes; then :
-ac_cv_type_pid_t=no
-fi
-rm -f conftest.err conftest.$ac_objext conftest.$ac_ext
-fi
-echo "$as_me:$LINENO: result: $ac_cv_type_pid_t" >&5
-echo "${ECHO_T}$ac_cv_type_pid_t" >&6
-if test $ac_cv_type_pid_t = yes; then
- :
else
cat >>confdefs.h <<_ACEOF
@@ -6085,129 +6352,19 @@ _ACEOF
fi
-echo "$as_me:$LINENO: checking for size_t" >&5
-echo $ECHO_N "checking for size_t... $ECHO_C" >&6
-if test "${ac_cv_type_size_t+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-$ac_includes_default
-int
-main ()
-{
-if ((size_t *) 0)
- return 0;
-if (sizeof (size_t))
- return 0;
- ;
- return 0;
-}
-_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_cxx_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
- ac_cv_type_size_t=yes
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
+ac_fn_cxx_check_type "$LINENO" "size_t" "ac_cv_type_size_t" "$ac_includes_default"
+if test "x$ac_cv_type_size_t" = xyes; then :
-ac_cv_type_size_t=no
-fi
-rm -f conftest.err conftest.$ac_objext conftest.$ac_ext
-fi
-echo "$as_me:$LINENO: result: $ac_cv_type_size_t" >&5
-echo "${ECHO_T}$ac_cv_type_size_t" >&6
-if test $ac_cv_type_size_t = yes; then
- :
else
cat >>confdefs.h <<_ACEOF
-#define size_t unsigned
+#define size_t unsigned int
_ACEOF
fi
-echo "$as_me:$LINENO: checking for ptrdiff_t" >&5
-echo $ECHO_N "checking for ptrdiff_t... $ECHO_C" >&6
-if test "${ac_cv_type_ptrdiff_t+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-$ac_includes_default
-int
-main ()
-{
-if ((ptrdiff_t *) 0)
- return 0;
-if (sizeof (ptrdiff_t))
- return 0;
- ;
- return 0;
-}
-_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_cxx_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
- ac_cv_type_ptrdiff_t=yes
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-ac_cv_type_ptrdiff_t=no
-fi
-rm -f conftest.err conftest.$ac_objext conftest.$ac_ext
-fi
-echo "$as_me:$LINENO: result: $ac_cv_type_ptrdiff_t" >&5
-echo "${ECHO_T}$ac_cv_type_ptrdiff_t" >&6
-if test $ac_cv_type_ptrdiff_t = yes; then
+ac_fn_cxx_check_type "$LINENO" "ptrdiff_t" "ac_cv_type_ptrdiff_t" "$ac_includes_default"
+if test "x$ac_cv_type_ptrdiff_t" = xyes; then :
cat >>confdefs.h <<_ACEOF
#define HAVE_PTRDIFF_T 1
@@ -6216,29 +6373,25 @@ _ACEOF
fi
-echo "$as_me:$LINENO: checking for an ANSI C-conforming const" >&5
-echo $ECHO_N "checking for an ANSI C-conforming const... $ECHO_C" >&6
-if test "${ac_cv_c_const+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for an ANSI C-conforming const" >&5
+$as_echo_n "checking for an ANSI C-conforming const... " >&6; }
+if ${ac_cv_c_const+:} false; then :
+ $as_echo_n "(cached) " >&6
else
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
+ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
/* end confdefs.h. */
int
main ()
{
-/* FIXME: Include the comments suggested by Paul. */
+
#ifndef __cplusplus
- /* Ultrix mips cc rejects this. */
+ /* Ultrix mips cc rejects this sort of thing. */
typedef int charset[2];
- const charset x;
+ const charset cs = { 0, 0 };
/* SunOS 4.1.1 cc rejects this. */
- char const *const *ccp;
- char **p;
+ char const *const *pcpcc;
+ char **ppc;
/* NEC SVR4.0.2 mips cc rejects this. */
struct point {int x, y;};
static struct point const zero = {0,0};
@@ -6247,16 +6400,18 @@ main ()
an arm of an if-expression whose if-part is not a constant
expression */
const char *g = "string";
- ccp = &g + (g ? g-g : 0);
+ pcpcc = &g + (g ? g-g : 0);
/* HPUX 7.0 cc rejects these. */
- ++ccp;
- p = (char**) ccp;
- ccp = (char const *const *) p;
- { /* SCO 3.2v4 cc rejects this. */
- char *t;
+ ++pcpcc;
+ ppc = (char**) pcpcc;
+ pcpcc = (char const *const *) ppc;
+ { /* SCO 3.2v4 cc rejects this sort of thing. */
+ char tx;
+ char *t = &tx;
char const *s = 0 ? (char *) 0 : (char const *) 0;
*t++ = 0;
+ if (s) return 0;
}
{ /* Someone thinks the Sun supposedly-ANSI compiler will reject this. */
int x[] = {25, 17};
@@ -6268,84 +6423,56 @@ main ()
iptr p = 0;
++p;
}
- { /* AIX XL C 1.02.0.0 rejects this saying
+ { /* AIX XL C 1.02.0.0 rejects this sort of thing, saying
"k.c", line 2.27: 1506-025 (S) Operand must be a modifiable lvalue. */
- struct s { int j; const int *ap[3]; };
- struct s *b; b->j = 5;
+ struct s { int j; const int *ap[3]; } bx;
+ struct s *b = &bx; b->j = 5;
}
{ /* ULTRIX-32 V3.1 (Rev 9) vcc rejects this */
const int foo = 10;
+ if (!foo) return 0;
}
+ return !cs[0] && !zero.x;
#endif
;
return 0;
}
_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_cxx_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
+if ac_fn_cxx_try_compile "$LINENO"; then :
ac_cv_c_const=yes
else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-ac_cv_c_const=no
+ ac_cv_c_const=no
fi
-rm -f conftest.err conftest.$ac_objext conftest.$ac_ext
+rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
fi
-echo "$as_me:$LINENO: result: $ac_cv_c_const" >&5
-echo "${ECHO_T}$ac_cv_c_const" >&6
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_c_const" >&5
+$as_echo "$ac_cv_c_const" >&6; }
if test $ac_cv_c_const = no; then
-cat >>confdefs.h <<\_ACEOF
-#define const
-_ACEOF
+$as_echo "#define const /**/" >>confdefs.h
fi
-# Check whether --enable-largefile or --disable-largefile was given.
-if test "${enable_largefile+set}" = set; then
- enableval="$enable_largefile"
+# Check whether --enable-largefile was given.
+if test "${enable_largefile+set}" = set; then :
+ enableval=$enable_largefile;
+fi
-fi;
if test "$enable_largefile" != no; then
- echo "$as_me:$LINENO: checking for special C compiler options needed for large files" >&5
-echo $ECHO_N "checking for special C compiler options needed for large files... $ECHO_C" >&6
-if test "${ac_cv_sys_largefile_CC+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
+ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for special C compiler options needed for large files" >&5
+$as_echo_n "checking for special C compiler options needed for large files... " >&6; }
+if ${ac_cv_sys_largefile_CC+:} false; then :
+ $as_echo_n "(cached) " >&6
else
ac_cv_sys_largefile_CC=no
if test "$GCC" != yes; then
ac_save_CC=$CC
while :; do
- # IRIX 6.2 and later do not support large files by default,
- # so use the C compiler's -n32 option if that helps.
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
+ # IRIX 6.2 and later do not support large files by default,
+ # so use the C compiler's -n32 option if that helps.
+ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
/* end confdefs.h. */
#include <sys/types.h>
/* Check that off_t can represent 2**63 - 1 correctly.
@@ -6364,89 +6491,34 @@ main ()
return 0;
}
_ACEOF
- rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_cxx_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
+ if ac_fn_cxx_try_compile "$LINENO"; then :
break
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
fi
-rm -f conftest.err conftest.$ac_objext
- CC="$CC -n32"
- rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_cxx_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
+rm -f core conftest.err conftest.$ac_objext
+ CC="$CC -n32"
+ if ac_fn_cxx_try_compile "$LINENO"; then :
ac_cv_sys_largefile_CC=' -n32'; break
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
fi
-rm -f conftest.err conftest.$ac_objext
+rm -f core conftest.err conftest.$ac_objext
break
done
CC=$ac_save_CC
rm -f conftest.$ac_ext
fi
fi
-echo "$as_me:$LINENO: result: $ac_cv_sys_largefile_CC" >&5
-echo "${ECHO_T}$ac_cv_sys_largefile_CC" >&6
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_sys_largefile_CC" >&5
+$as_echo "$ac_cv_sys_largefile_CC" >&6; }
if test "$ac_cv_sys_largefile_CC" != no; then
CC=$CC$ac_cv_sys_largefile_CC
fi
- echo "$as_me:$LINENO: checking for _FILE_OFFSET_BITS value needed for large files" >&5
-echo $ECHO_N "checking for _FILE_OFFSET_BITS value needed for large files... $ECHO_C" >&6
-if test "${ac_cv_sys_file_offset_bits+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
+ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for _FILE_OFFSET_BITS value needed for large files" >&5
+$as_echo_n "checking for _FILE_OFFSET_BITS value needed for large files... " >&6; }
+if ${ac_cv_sys_file_offset_bits+:} false; then :
+ $as_echo_n "(cached) " >&6
else
while :; do
- ac_cv_sys_file_offset_bits=no
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
+ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
/* end confdefs.h. */
#include <sys/types.h>
/* Check that off_t can represent 2**63 - 1 correctly.
@@ -6465,40 +6537,11 @@ main ()
return 0;
}
_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_cxx_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
- break
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
+if ac_fn_cxx_try_compile "$LINENO"; then :
+ ac_cv_sys_file_offset_bits=no; break
fi
-rm -f conftest.err conftest.$ac_objext conftest.$ac_ext
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
+rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
+ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
/* end confdefs.h. */
#define _FILE_OFFSET_BITS 64
#include <sys/types.h>
@@ -6518,60 +6561,33 @@ main ()
return 0;
}
_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_cxx_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
+if ac_fn_cxx_try_compile "$LINENO"; then :
ac_cv_sys_file_offset_bits=64; break
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
fi
-rm -f conftest.err conftest.$ac_objext conftest.$ac_ext
+rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
+ ac_cv_sys_file_offset_bits=unknown
break
done
fi
-echo "$as_me:$LINENO: result: $ac_cv_sys_file_offset_bits" >&5
-echo "${ECHO_T}$ac_cv_sys_file_offset_bits" >&6
-if test "$ac_cv_sys_file_offset_bits" != no; then
-
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_sys_file_offset_bits" >&5
+$as_echo "$ac_cv_sys_file_offset_bits" >&6; }
+case $ac_cv_sys_file_offset_bits in #(
+ no | unknown) ;;
+ *)
cat >>confdefs.h <<_ACEOF
#define _FILE_OFFSET_BITS $ac_cv_sys_file_offset_bits
_ACEOF
-
-fi
-rm -f conftest*
- echo "$as_me:$LINENO: checking for _LARGE_FILES value needed for large files" >&5
-echo $ECHO_N "checking for _LARGE_FILES value needed for large files... $ECHO_C" >&6
-if test "${ac_cv_sys_large_files+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
+;;
+esac
+rm -rf conftest*
+ if test $ac_cv_sys_file_offset_bits = unknown; then
+ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for _LARGE_FILES value needed for large files" >&5
+$as_echo_n "checking for _LARGE_FILES value needed for large files... " >&6; }
+if ${ac_cv_sys_large_files+:} false; then :
+ $as_echo_n "(cached) " >&6
else
while :; do
- ac_cv_sys_large_files=no
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
+ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
/* end confdefs.h. */
#include <sys/types.h>
/* Check that off_t can represent 2**63 - 1 correctly.
@@ -6590,40 +6606,11 @@ main ()
return 0;
}
_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_cxx_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
- break
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
+if ac_fn_cxx_try_compile "$LINENO"; then :
+ ac_cv_sys_large_files=no; break
fi
-rm -f conftest.err conftest.$ac_objext conftest.$ac_ext
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
+rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
+ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
/* end confdefs.h. */
#define _LARGE_FILES 1
#include <sys/types.h>
@@ -6643,118 +6630,69 @@ main ()
return 0;
}
_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_cxx_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
+if ac_fn_cxx_try_compile "$LINENO"; then :
ac_cv_sys_large_files=1; break
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
fi
-rm -f conftest.err conftest.$ac_objext conftest.$ac_ext
+rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
+ ac_cv_sys_large_files=unknown
break
done
fi
-echo "$as_me:$LINENO: result: $ac_cv_sys_large_files" >&5
-echo "${ECHO_T}$ac_cv_sys_large_files" >&6
-if test "$ac_cv_sys_large_files" != no; then
-
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_sys_large_files" >&5
+$as_echo "$ac_cv_sys_large_files" >&6; }
+case $ac_cv_sys_large_files in #(
+ no | unknown) ;;
+ *)
cat >>confdefs.h <<_ACEOF
#define _LARGE_FILES $ac_cv_sys_large_files
_ACEOF
+;;
+esac
+rm -rf conftest*
+ fi
+
-fi
-rm -f conftest*
fi
# Checks for libraries.
-
-echo "$as_me:$LINENO: checking for gzread in -lz" >&5
-echo $ECHO_N "checking for gzread in -lz... $ECHO_C" >&6
-if test "${ac_cv_lib_z_gzread+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for gzread in -lz" >&5
+$as_echo_n "checking for gzread in -lz... " >&6; }
+if ${ac_cv_lib_z_gzread+:} false; then :
+ $as_echo_n "(cached) " >&6
else
ac_check_lib_save_LIBS=$LIBS
LIBS="-lz $LIBS"
-cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
+cat confdefs.h - <<_ACEOF >conftest.$ac_ext
/* end confdefs.h. */
-/* Override any gcc2 internal prototype to avoid an error. */
+/* Override any GCC internal prototype to avoid an error.
+ Use char because int might match the return type of a GCC
+ builtin and then its argument prototype would still apply. */
#ifdef __cplusplus
extern "C"
#endif
-/* We use char because int might match the return type of a gcc2
- builtin and then its argument prototype would still apply. */
char gzread ();
int
main ()
{
-gzread ();
+return gzread ();
;
return 0;
}
_ACEOF
-rm -f conftest.$ac_objext conftest$ac_exeext
-if { (eval echo "$as_me:$LINENO: \"$ac_link\"") >&5
- (eval $ac_link) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_cxx_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest$ac_exeext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
+if ac_fn_cxx_try_link "$LINENO"; then :
ac_cv_lib_z_gzread=yes
else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-ac_cv_lib_z_gzread=no
+ ac_cv_lib_z_gzread=no
fi
-rm -f conftest.err conftest.$ac_objext \
- conftest$ac_exeext conftest.$ac_ext
+rm -f core conftest.err conftest.$ac_objext \
+ conftest$ac_exeext conftest.$ac_ext
LIBS=$ac_check_lib_save_LIBS
fi
-echo "$as_me:$LINENO: result: $ac_cv_lib_z_gzread" >&5
-echo "${ECHO_T}$ac_cv_lib_z_gzread" >&6
-if test $ac_cv_lib_z_gzread = yes; then
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_z_gzread" >&5
+$as_echo "$ac_cv_lib_z_gzread" >&6; }
+if test "x$ac_cv_lib_z_gzread" = xyes; then :
cat >>confdefs.h <<_ACEOF
#define HAVE_LIBZ 1
_ACEOF
@@ -6765,171 +6703,29 @@ fi
# Checks for library functions.
-
for ac_header in stdlib.h
-do
-as_ac_Header=`echo "ac_cv_header_$ac_header" | $as_tr_sh`
-if eval "test \"\${$as_ac_Header+set}\" = set"; then
- echo "$as_me:$LINENO: checking for $ac_header" >&5
-echo $ECHO_N "checking for $ac_header... $ECHO_C" >&6
-if eval "test \"\${$as_ac_Header+set}\" = set"; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-fi
-echo "$as_me:$LINENO: result: `eval echo '${'$as_ac_Header'}'`" >&5
-echo "${ECHO_T}`eval echo '${'$as_ac_Header'}'`" >&6
-else
- # Is the header compilable?
-echo "$as_me:$LINENO: checking $ac_header usability" >&5
-echo $ECHO_N "checking $ac_header usability... $ECHO_C" >&6
-cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-$ac_includes_default
-#include <$ac_header>
-_ACEOF
-rm -f conftest.$ac_objext
-if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
- (eval $ac_compile) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_cxx_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest.$ac_objext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
- ac_header_compiler=yes
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-ac_header_compiler=no
-fi
-rm -f conftest.err conftest.$ac_objext conftest.$ac_ext
-echo "$as_me:$LINENO: result: $ac_header_compiler" >&5
-echo "${ECHO_T}$ac_header_compiler" >&6
-
-# Is the header present?
-echo "$as_me:$LINENO: checking $ac_header presence" >&5
-echo $ECHO_N "checking $ac_header presence... $ECHO_C" >&6
-cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-#include <$ac_header>
-_ACEOF
-if { (eval echo "$as_me:$LINENO: \"$ac_cpp conftest.$ac_ext\"") >&5
- (eval $ac_cpp conftest.$ac_ext) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } >/dev/null; then
- if test -s conftest.err; then
- ac_cpp_err=$ac_cxx_preproc_warn_flag
- ac_cpp_err=$ac_cpp_err$ac_cxx_werror_flag
- else
- ac_cpp_err=
- fi
-else
- ac_cpp_err=yes
-fi
-if test -z "$ac_cpp_err"; then
- ac_header_preproc=yes
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
- ac_header_preproc=no
-fi
-rm -f conftest.err conftest.$ac_ext
-echo "$as_me:$LINENO: result: $ac_header_preproc" >&5
-echo "${ECHO_T}$ac_header_preproc" >&6
-
-# So? What about this header?
-case $ac_header_compiler:$ac_header_preproc:$ac_cxx_preproc_warn_flag in
- yes:no: )
- { echo "$as_me:$LINENO: WARNING: $ac_header: accepted by the compiler, rejected by the preprocessor!" >&5
-echo "$as_me: WARNING: $ac_header: accepted by the compiler, rejected by the preprocessor!" >&2;}
- { echo "$as_me:$LINENO: WARNING: $ac_header: proceeding with the compiler's result" >&5
-echo "$as_me: WARNING: $ac_header: proceeding with the compiler's result" >&2;}
- ac_header_preproc=yes
- ;;
- no:yes:* )
- { echo "$as_me:$LINENO: WARNING: $ac_header: present but cannot be compiled" >&5
-echo "$as_me: WARNING: $ac_header: present but cannot be compiled" >&2;}
- { echo "$as_me:$LINENO: WARNING: $ac_header: check for missing prerequisite headers?" >&5
-echo "$as_me: WARNING: $ac_header: check for missing prerequisite headers?" >&2;}
- { echo "$as_me:$LINENO: WARNING: $ac_header: see the Autoconf documentation" >&5
-echo "$as_me: WARNING: $ac_header: see the Autoconf documentation" >&2;}
- { echo "$as_me:$LINENO: WARNING: $ac_header: section \"Present But Cannot Be Compiled\"" >&5
-echo "$as_me: WARNING: $ac_header: section \"Present But Cannot Be Compiled\"" >&2;}
- { echo "$as_me:$LINENO: WARNING: $ac_header: proceeding with the preprocessor's result" >&5
-echo "$as_me: WARNING: $ac_header: proceeding with the preprocessor's result" >&2;}
- { echo "$as_me:$LINENO: WARNING: $ac_header: in the future, the compiler will take precedence" >&5
-echo "$as_me: WARNING: $ac_header: in the future, the compiler will take precedence" >&2;}
- (
- cat <<\_ASBOX
-## ----------------------------------------- ##
-## Report this to tophat.cufflinks at gmail.com ##
-## ----------------------------------------- ##
-_ASBOX
- ) |
- sed "s/^/$as_me: WARNING: /" >&2
- ;;
-esac
-echo "$as_me:$LINENO: checking for $ac_header" >&5
-echo $ECHO_N "checking for $ac_header... $ECHO_C" >&6
-if eval "test \"\${$as_ac_Header+set}\" = set"; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- eval "$as_ac_Header=\$ac_header_preproc"
-fi
-echo "$as_me:$LINENO: result: `eval echo '${'$as_ac_Header'}'`" >&5
-echo "${ECHO_T}`eval echo '${'$as_ac_Header'}'`" >&6
-
-fi
-if test `eval echo '${'$as_ac_Header'}'` = yes; then
+do :
+ ac_fn_cxx_check_header_mongrel "$LINENO" "stdlib.h" "ac_cv_header_stdlib_h" "$ac_includes_default"
+if test "x$ac_cv_header_stdlib_h" = xyes; then :
cat >>confdefs.h <<_ACEOF
-#define `echo "HAVE_$ac_header" | $as_tr_cpp` 1
+#define HAVE_STDLIB_H 1
_ACEOF
fi
done
-echo "$as_me:$LINENO: checking for GNU libc compatible malloc" >&5
-echo $ECHO_N "checking for GNU libc compatible malloc... $ECHO_C" >&6
-if test "${ac_cv_func_malloc_0_nonnull+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for GNU libc compatible malloc" >&5
+$as_echo_n "checking for GNU libc compatible malloc... " >&6; }
+if ${ac_cv_func_malloc_0_nonnull+:} false; then :
+ $as_echo_n "(cached) " >&6
else
- if test "$cross_compiling" = yes; then
+ if test "$cross_compiling" = yes; then :
ac_cv_func_malloc_0_nonnull=no
else
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
+ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
/* end confdefs.h. */
-#if STDC_HEADERS || HAVE_STDLIB_H
+#if defined STDC_HEADERS || defined HAVE_STDLIB_H
# include <stdlib.h>
#else
char *malloc ();
@@ -6938,224 +6734,125 @@ char *malloc ();
int
main ()
{
-exit (malloc (0) ? 0 : 1);
+return ! malloc (0);
;
return 0;
}
_ACEOF
-rm -f conftest$ac_exeext
-if { (eval echo "$as_me:$LINENO: \"$ac_link\"") >&5
- (eval $ac_link) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } && { ac_try='./conftest$ac_exeext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
+if ac_fn_cxx_try_run "$LINENO"; then :
ac_cv_func_malloc_0_nonnull=yes
else
- echo "$as_me: program exited with status $ac_status" >&5
-echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-( exit $ac_status )
-ac_cv_func_malloc_0_nonnull=no
+ ac_cv_func_malloc_0_nonnull=no
fi
-rm -f core *.core gmon.out bb.out conftest$ac_exeext conftest.$ac_objext conftest.$ac_ext
+rm -f core *.core core.conftest.* gmon.out bb.out conftest$ac_exeext \
+ conftest.$ac_objext conftest.beam conftest.$ac_ext
fi
+
fi
-echo "$as_me:$LINENO: result: $ac_cv_func_malloc_0_nonnull" >&5
-echo "${ECHO_T}$ac_cv_func_malloc_0_nonnull" >&6
-if test $ac_cv_func_malloc_0_nonnull = yes; then
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_func_malloc_0_nonnull" >&5
+$as_echo "$ac_cv_func_malloc_0_nonnull" >&6; }
+if test $ac_cv_func_malloc_0_nonnull = yes; then :
-cat >>confdefs.h <<\_ACEOF
-#define HAVE_MALLOC 1
-_ACEOF
+$as_echo "#define HAVE_MALLOC 1" >>confdefs.h
else
- cat >>confdefs.h <<\_ACEOF
-#define HAVE_MALLOC 0
-_ACEOF
+ $as_echo "#define HAVE_MALLOC 0" >>confdefs.h
- case $LIBOBJS in
- "malloc.$ac_objext" | \
- *" malloc.$ac_objext" | \
- "malloc.$ac_objext "* | \
+ case " $LIBOBJS " in
*" malloc.$ac_objext "* ) ;;
- *) LIBOBJS="$LIBOBJS malloc.$ac_objext" ;;
+ *) LIBOBJS="$LIBOBJS malloc.$ac_objext"
+ ;;
esac
-cat >>confdefs.h <<\_ACEOF
-#define malloc rpl_malloc
-_ACEOF
+$as_echo "#define malloc rpl_malloc" >>confdefs.h
fi
+for ac_func in memset strdup strrchr strtol strsep
+do :
+ as_ac_var=`$as_echo "ac_cv_func_$ac_func" | $as_tr_sh`
+ac_fn_cxx_check_func "$LINENO" "$ac_func" "$as_ac_var"
+if eval test \"x\$"$as_ac_var"\" = x"yes"; then :
+ cat >>confdefs.h <<_ACEOF
+#define `$as_echo "HAVE_$ac_func" | $as_tr_cpp` 1
+_ACEOF
+fi
+done
+# check the platform
+# Make sure we can run config.sub.
+$SHELL "$ac_aux_dir/config.sub" sun4 >/dev/null 2>&1 ||
+ as_fn_error $? "cannot run $SHELL $ac_aux_dir/config.sub" "$LINENO" 5
+
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking build system type" >&5
+$as_echo_n "checking build system type... " >&6; }
+if ${ac_cv_build+:} false; then :
+ $as_echo_n "(cached) " >&6
+else
+ ac_build_alias=$build_alias
+test "x$ac_build_alias" = x &&
+ ac_build_alias=`$SHELL "$ac_aux_dir/config.guess"`
+test "x$ac_build_alias" = x &&
+ as_fn_error $? "cannot guess build type; you must specify one" "$LINENO" 5
+ac_cv_build=`$SHELL "$ac_aux_dir/config.sub" $ac_build_alias` ||
+ as_fn_error $? "$SHELL $ac_aux_dir/config.sub $ac_build_alias failed" "$LINENO" 5
+
+fi
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_build" >&5
+$as_echo "$ac_cv_build" >&6; }
+case $ac_cv_build in
+*-*-*) ;;
+*) as_fn_error $? "invalid value of canonical build" "$LINENO" 5;;
+esac
+build=$ac_cv_build
+ac_save_IFS=$IFS; IFS='-'
+set x $ac_cv_build
+shift
+build_cpu=$1
+build_vendor=$2
+shift; shift
+# Remember, the first character of IFS is used to create $*,
+# except with old shells:
+build_os=$*
+IFS=$ac_save_IFS
+case $build_os in *\ *) build_os=`echo "$build_os" | sed 's/ /-/g'`;; esac
-
-for ac_func in memset strdup strrchr strtol strsep
-do
-as_ac_var=`echo "ac_cv_func_$ac_func" | $as_tr_sh`
-echo "$as_me:$LINENO: checking for $ac_func" >&5
-echo $ECHO_N "checking for $ac_func... $ECHO_C" >&6
-if eval "test \"\${$as_ac_var+set}\" = set"; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-/* Define $ac_func to an innocuous variant, in case <limits.h> declares $ac_func.
- For example, HP-UX 11i <limits.h> declares gettimeofday. */
-#define $ac_func innocuous_$ac_func
-
-/* System header to define __stub macros and hopefully few prototypes,
- which can conflict with char $ac_func (); below.
- Prefer <limits.h> to <assert.h> if __STDC__ is defined, since
- <limits.h> exists even on freestanding compilers. */
-
-#ifdef __STDC__
-# include <limits.h>
-#else
-# include <assert.h>
-#endif
-
-#undef $ac_func
-
-/* Override any gcc2 internal prototype to avoid an error. */
-#ifdef __cplusplus
-extern "C"
-{
-#endif
-/* We use char because int might match the return type of a gcc2
- builtin and then its argument prototype would still apply. */
-char $ac_func ();
-/* The GNU C library defines this for functions which it implements
- to always fail with ENOSYS. Some functions are actually named
- something starting with __ and the normal name is an alias. */
-#if defined (__stub_$ac_func) || defined (__stub___$ac_func)
-choke me
-#else
-char (*f) () = $ac_func;
-#endif
-#ifdef __cplusplus
-}
-#endif
-
-int
-main ()
-{
-return f != $ac_func;
- ;
- return 0;
-}
-_ACEOF
-rm -f conftest.$ac_objext conftest$ac_exeext
-if { (eval echo "$as_me:$LINENO: \"$ac_link\"") >&5
- (eval $ac_link) 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } &&
- { ac_try='test -z "$ac_cxx_werror_flag"
- || test ! -s conftest.err'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; } &&
- { ac_try='test -s conftest$ac_exeext'
- { (eval echo "$as_me:$LINENO: \"$ac_try\"") >&5
- (eval $ac_try) 2>&5
- ac_status=$?
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); }; }; then
- eval "$as_ac_var=yes"
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
-eval "$as_ac_var=no"
-fi
-rm -f conftest.err conftest.$ac_objext \
- conftest$ac_exeext conftest.$ac_ext
-fi
-echo "$as_me:$LINENO: result: `eval echo '${'$as_ac_var'}'`" >&5
-echo "${ECHO_T}`eval echo '${'$as_ac_var'}'`" >&6
-if test `eval echo '${'$as_ac_var'}'` = yes; then
- cat >>confdefs.h <<_ACEOF
-#define `echo "HAVE_$ac_func" | $as_tr_cpp` 1
-_ACEOF
-
-fi
-done
-
-
-# check the platform
-# Make sure we can run config.sub.
-$ac_config_sub sun4 >/dev/null 2>&1 ||
- { { echo "$as_me:$LINENO: error: cannot run $ac_config_sub" >&5
-echo "$as_me: error: cannot run $ac_config_sub" >&2;}
- { (exit 1); exit 1; }; }
-
-echo "$as_me:$LINENO: checking build system type" >&5
-echo $ECHO_N "checking build system type... $ECHO_C" >&6
-if test "${ac_cv_build+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- ac_cv_build_alias=$build_alias
-test -z "$ac_cv_build_alias" &&
- ac_cv_build_alias=`$ac_config_guess`
-test -z "$ac_cv_build_alias" &&
- { { echo "$as_me:$LINENO: error: cannot guess build type; you must specify one" >&5
-echo "$as_me: error: cannot guess build type; you must specify one" >&2;}
- { (exit 1); exit 1; }; }
-ac_cv_build=`$ac_config_sub $ac_cv_build_alias` ||
- { { echo "$as_me:$LINENO: error: $ac_config_sub $ac_cv_build_alias failed" >&5
-echo "$as_me: error: $ac_config_sub $ac_cv_build_alias failed" >&2;}
- { (exit 1); exit 1; }; }
-
-fi
-echo "$as_me:$LINENO: result: $ac_cv_build" >&5
-echo "${ECHO_T}$ac_cv_build" >&6
-build=$ac_cv_build
-build_cpu=`echo $ac_cv_build | sed 's/^\([^-]*\)-\([^-]*\)-\(.*\)$/\1/'`
-build_vendor=`echo $ac_cv_build | sed 's/^\([^-]*\)-\([^-]*\)-\(.*\)$/\2/'`
-build_os=`echo $ac_cv_build | sed 's/^\([^-]*\)-\([^-]*\)-\(.*\)$/\3/'`
-
-
-echo "$as_me:$LINENO: checking host system type" >&5
-echo $ECHO_N "checking host system type... $ECHO_C" >&6
-if test "${ac_cv_host+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- ac_cv_host_alias=$host_alias
-test -z "$ac_cv_host_alias" &&
- ac_cv_host_alias=$ac_cv_build_alias
-ac_cv_host=`$ac_config_sub $ac_cv_host_alias` ||
- { { echo "$as_me:$LINENO: error: $ac_config_sub $ac_cv_host_alias failed" >&5
-echo "$as_me: error: $ac_config_sub $ac_cv_host_alias failed" >&2;}
- { (exit 1); exit 1; }; }
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking host system type" >&5
+$as_echo_n "checking host system type... " >&6; }
+if ${ac_cv_host+:} false; then :
+ $as_echo_n "(cached) " >&6
+else
+ if test "x$host_alias" = x; then
+ ac_cv_host=$ac_cv_build
+else
+ ac_cv_host=`$SHELL "$ac_aux_dir/config.sub" $host_alias` ||
+ as_fn_error $? "$SHELL $ac_aux_dir/config.sub $host_alias failed" "$LINENO" 5
+fi
fi
-echo "$as_me:$LINENO: result: $ac_cv_host" >&5
-echo "${ECHO_T}$ac_cv_host" >&6
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_host" >&5
+$as_echo "$ac_cv_host" >&6; }
+case $ac_cv_host in
+*-*-*) ;;
+*) as_fn_error $? "invalid value of canonical host" "$LINENO" 5;;
+esac
host=$ac_cv_host
-host_cpu=`echo $ac_cv_host | sed 's/^\([^-]*\)-\([^-]*\)-\(.*\)$/\1/'`
-host_vendor=`echo $ac_cv_host | sed 's/^\([^-]*\)-\([^-]*\)-\(.*\)$/\2/'`
-host_os=`echo $ac_cv_host | sed 's/^\([^-]*\)-\([^-]*\)-\(.*\)$/\3/'`
+ac_save_IFS=$IFS; IFS='-'
+set x $ac_cv_host
+shift
+host_cpu=$1
+host_vendor=$2
+shift; shift
+# Remember, the first character of IFS is used to create $*,
+# except with old shells:
+host_os=$*
+IFS=$ac_save_IFS
+case $host_os in *\ *) host_os=`echo "$host_os" | sed 's/ /-/g'`;; esac
@@ -7171,49 +6868,49 @@ ext_CFLAGS=""
debug_CFLAGS=""
user_LDFLAGS="$LDFLAGS"
-# Check whether --enable-intel64 or --disable-intel64 was given.
-if test "${enable_intel64+set}" = set; then
- enableval="$enable_intel64"
- ext_CFLAGS="${ext_CFLAGS} -mtune=nocona"
-fi;
+# Check whether --enable-intel64 was given.
+if test "${enable_intel64+set}" = set; then :
+ enableval=$enable_intel64; ext_CFLAGS="${ext_CFLAGS} -mtune=nocona"
+fi
-# Check whether --enable-debug or --disable-debug was given.
-if test "${enable_debug+set}" = set; then
- enableval="$enable_debug"
+# Check whether --enable-debug was given.
+if test "${enable_debug+set}" = set; then :
+ enableval=$enable_debug;
else
enable_debug=no
-fi;
-# Check whether --enable-optim or --disable-optim was given.
-if test "${enable_optim+set}" = set; then
- enableval="$enable_optim"
- if test "x$enable_optim" = xyes; then enable_optim=3; fi
+fi
+
+# Check whether --enable-optim was given.
+if test "${enable_optim+set}" = set; then :
+ enableval=$enable_optim; if test "x$enable_optim" = xyes; then enable_optim=3; fi
else
enable_optim=3
-fi;
+fi
+
-if test "x$enable_optim" != xno; then
+if test "x$enable_optim" != xno; then :
ext_CFLAGS="$ext_CFLAGS -O$enable_optim"
fi
-
-if test "x$enable_debug" = xyes; then
+if test "x$enable_debug" = xyes; then :
debug_CFLAGS="-DDEBUG"
else
debug_CFLAGS="-DNDEBUG"
fi
-
CFLAGS="${generic_CFLAGS} ${ext_CFLAGS} ${user_CFLAGS} ${debug_CFLAGS}"
CXXFLAGS="$CFLAGS"
-CXXFLAGS="$CXXFLAGS $BOOST_CPPFLAGS $BAM_CPPFLAGS -I./SeqAn-1.3"
-LDFLAGS="$BOOST_LDFLAGS $BAM_LDFLAGS $user_LDFLAGS"
-
-# test to see if srcdir already configured
-if test "`cd $srcdir && pwd`" != "`pwd`" &&
- test -f $srcdir/config.status; then
- { { echo "$as_me:$LINENO: error: source directory already configured; run \"make distclean\" there first" >&5
-echo "$as_me: error: source directory already configured; run \"make distclean\" there first" >&2;}
- { (exit 1); exit 1; }; }
+CXXFLAGS="$CXXFLAGS $BAM_CPPFLAGS $BOOST_CPPFLAGS -I./SeqAn-1.3"
+LDFLAGS="$BAM_LDFLAGS $BOOST_LDFLAGS $user_LDFLAGS"
+
+if test "`cd $srcdir && pwd`" != "`pwd`"; then
+ # Use -I$(srcdir) only when $(srcdir) != ., so that make's output
+ # is not polluted with repeated "-I."
+ am__isrc=' -I$(srcdir)'
+ # test to see if srcdir already configured
+ if test -f $srcdir/config.status; then
+ as_fn_error $? "source directory already configured; run \"make distclean\" there first" "$LINENO" 5
+ fi
fi
# test whether we have cygpath
@@ -7228,7 +6925,7 @@ fi
# Define the identity of the package.
PACKAGE='tophat'
- VERSION='2.0.13'
+ VERSION='2.0.14'
cat >>confdefs.h <<_ACEOF
@@ -7256,110 +6953,26 @@ AUTOHEADER=${AUTOHEADER-"${am_missing_run}autoheader"}
MAKEINFO=${MAKEINFO-"${am_missing_run}makeinfo"}
-install_sh=${install_sh-"$am_aux_dir/install-sh"}
-
-# Installed binaries are usually stripped using `strip' when the user
-# run `make install-strip'. However `strip' might not be the right
-# tool to use in cross-compilation environments, therefore Automake
-# will honor the `STRIP' environment variable to overrule this program.
-if test "$cross_compiling" != no; then
- if test -n "$ac_tool_prefix"; then
- # Extract the first word of "${ac_tool_prefix}strip", so it can be a program name with args.
-set dummy ${ac_tool_prefix}strip; ac_word=$2
-echo "$as_me:$LINENO: checking for $ac_word" >&5
-echo $ECHO_N "checking for $ac_word... $ECHO_C" >&6
-if test "${ac_cv_prog_STRIP+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- if test -n "$STRIP"; then
- ac_cv_prog_STRIP="$STRIP" # Let the user override the test.
-else
-as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
-for as_dir in $PATH
-do
- IFS=$as_save_IFS
- test -z "$as_dir" && as_dir=.
- for ac_exec_ext in '' $ac_executable_extensions; do
- if $as_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
- ac_cv_prog_STRIP="${ac_tool_prefix}strip"
- echo "$as_me:$LINENO: found $as_dir/$ac_word$ac_exec_ext" >&5
- break 2
- fi
-done
-done
-
-fi
-fi
-STRIP=$ac_cv_prog_STRIP
-if test -n "$STRIP"; then
- echo "$as_me:$LINENO: result: $STRIP" >&5
-echo "${ECHO_T}$STRIP" >&6
-else
- echo "$as_me:$LINENO: result: no" >&5
-echo "${ECHO_T}no" >&6
-fi
-
-fi
-if test -z "$ac_cv_prog_STRIP"; then
- ac_ct_STRIP=$STRIP
- # Extract the first word of "strip", so it can be a program name with args.
-set dummy strip; ac_word=$2
-echo "$as_me:$LINENO: checking for $ac_word" >&5
-echo $ECHO_N "checking for $ac_word... $ECHO_C" >&6
-if test "${ac_cv_prog_ac_ct_STRIP+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- if test -n "$ac_ct_STRIP"; then
- ac_cv_prog_ac_ct_STRIP="$ac_ct_STRIP" # Let the user override the test.
-else
-as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
-for as_dir in $PATH
-do
- IFS=$as_save_IFS
- test -z "$as_dir" && as_dir=.
- for ac_exec_ext in '' $ac_executable_extensions; do
- if $as_executable_p "$as_dir/$ac_word$ac_exec_ext"; then
- ac_cv_prog_ac_ct_STRIP="strip"
- echo "$as_me:$LINENO: found $as_dir/$ac_word$ac_exec_ext" >&5
- break 2
- fi
-done
-done
-
- test -z "$ac_cv_prog_ac_ct_STRIP" && ac_cv_prog_ac_ct_STRIP=":"
-fi
-fi
-ac_ct_STRIP=$ac_cv_prog_ac_ct_STRIP
-if test -n "$ac_ct_STRIP"; then
- echo "$as_me:$LINENO: result: $ac_ct_STRIP" >&5
-echo "${ECHO_T}$ac_ct_STRIP" >&6
-else
- echo "$as_me:$LINENO: result: no" >&5
-echo "${ECHO_T}no" >&6
-fi
-
- STRIP=$ac_ct_STRIP
-else
- STRIP="$ac_cv_prog_STRIP"
-fi
-
-fi
-INSTALL_STRIP_PROGRAM="\${SHELL} \$(install_sh) -c -s"
+# For better backward compatibility. To be removed once Automake 1.9.x
+# dies out for good. For more background, see:
+# <http://lists.gnu.org/archive/html/automake/2012-07/msg00001.html>
+# <http://lists.gnu.org/archive/html/automake/2012-07/msg00014.html>
+mkdir_p='$(MKDIR_P)'
# We need awk for the "check" target. The system "awk" is bad on
# some platforms.
-# Always define AMTAR for backward compatibility.
+# Always define AMTAR for backward compatibility. Yes, it's still used
+# in the wild :-( We should find a proper way to deprecate it ...
+AMTAR='$${TAR-tar}'
-AMTAR=${AMTAR-"${am_missing_run}tar"}
-
-echo "$as_me:$LINENO: checking how to create a pax tar archive" >&5
-echo $ECHO_N "checking how to create a pax tar archive... $ECHO_C" >&6
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking how to create a pax tar archive" >&5
+$as_echo_n "checking how to create a pax tar archive... " >&6; }
# Loop over all known methods to create a tar archive until one works.
_am_tools='gnutar pax cpio none'
_am_tools=${am_cv_prog_tar_pax-$_am_tools}
# Do not fold the above two line into one, because Tru64 sh and
-# Solaris sh will not grok spaces in the rhs of `-'.
+# Solaris sh will not grok spaces in the rhs of '-'.
for _am_tool in $_am_tools
do
case $_am_tool in
@@ -7426,31 +7039,32 @@ do
done
rm -rf conftest.dir
-if test "${am_cv_prog_tar_pax+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
+if ${am_cv_prog_tar_pax+:} false; then :
+ $as_echo_n "(cached) " >&6
else
am_cv_prog_tar_pax=$_am_tool
fi
-echo "$as_me:$LINENO: result: $am_cv_prog_tar_pax" >&5
-echo "${ECHO_T}$am_cv_prog_tar_pax" >&6
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $am_cv_prog_tar_pax" >&5
+$as_echo "$am_cv_prog_tar_pax" >&6; }
depcc="$CC" am_compiler_list=
-echo "$as_me:$LINENO: checking dependency style of $depcc" >&5
-echo $ECHO_N "checking dependency style of $depcc... $ECHO_C" >&6
-if test "${am_cv_CC_dependencies_compiler_type+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking dependency style of $depcc" >&5
+$as_echo_n "checking dependency style of $depcc... " >&6; }
+if ${am_cv_CC_dependencies_compiler_type+:} false; then :
+ $as_echo_n "(cached) " >&6
else
if test -z "$AMDEP_TRUE" && test -f "$am_depcomp"; then
# We make a subdir and do the tests there. Otherwise we can end up
# making bogus files that we don't know about and never remove. For
# instance it was reported that on HP-UX the gcc test will end up
- # making a dummy file named `D' -- because `-MD' means `put the output
- # in D'.
+ # making a dummy file named 'D' -- because '-MD' means "put the output
+ # in D".
+ rm -rf conftest.dir
mkdir conftest.dir
# Copy depcomp to subdir because otherwise we won't find it if we're
# using a relative directory.
@@ -7468,6 +7082,11 @@ else
if test "$am_compiler_list" = ""; then
am_compiler_list=`sed -n 's/^#*\([a-zA-Z0-9]*\))$/\1/p' < ./depcomp`
fi
+ am__universal=false
+ case " $depcc " in #(
+ *\ -arch\ *\ -arch\ *) am__universal=true ;;
+ esac
+
for depmode in $am_compiler_list; do
# Setup a source with many dependencies, because some compilers
# like to wrap large dependency lists on column 80 (with \), and
@@ -7479,34 +7098,49 @@ else
: > sub/conftest.c
for i in 1 2 3 4 5 6; do
echo '#include "conftst'$i'.h"' >> sub/conftest.c
- # Using `: > sub/conftst$i.h' creates only sub/conftst1.h with
- # Solaris 8's {/usr,}/bin/sh.
- touch sub/conftst$i.h
+ # Using ": > sub/conftst$i.h" creates only sub/conftst1.h with
+ # Solaris 10 /bin/sh.
+ echo '/* dummy */' > sub/conftst$i.h
done
echo "${am__include} ${am__quote}sub/conftest.Po${am__quote}" > confmf
+ # We check with '-c' and '-o' for the sake of the "dashmstdout"
+ # mode. It turns out that the SunPro C++ compiler does not properly
+ # handle '-M -o', and we need to detect this. Also, some Intel
+ # versions had trouble with output in subdirs.
+ am__obj=sub/conftest.${OBJEXT-o}
+ am__minus_obj="-o $am__obj"
case $depmode in
+ gcc)
+ # This depmode causes a compiler race in universal mode.
+ test "$am__universal" = false || continue
+ ;;
nosideeffect)
- # after this tag, mechanisms are not by side-effect, so they'll
- # only be used when explicitly requested
+ # After this tag, mechanisms are not by side-effect, so they'll
+ # only be used when explicitly requested.
if test "x$enable_dependency_tracking" = xyes; then
continue
else
break
fi
;;
+ msvc7 | msvc7msys | msvisualcpp | msvcmsys)
+ # This compiler won't grok '-c -o', but also, the minuso test has
+ # not run yet. These depmodes are late enough in the game, and
+ # so weak that their functioning should not be impacted.
+ am__obj=conftest.${OBJEXT-o}
+ am__minus_obj=
+ ;;
none) break ;;
esac
- # We check with `-c' and `-o' for the sake of the "dashmstdout"
- # mode. It turns out that the SunPro C++ compiler does not properly
- # handle `-M -o', and we need to detect this.
if depmode=$depmode \
- source=sub/conftest.c object=sub/conftest.${OBJEXT-o} \
+ source=sub/conftest.c object=$am__obj \
depfile=sub/conftest.Po tmpdepfile=sub/conftest.TPo \
- $SHELL ./depcomp $depcc -c -o sub/conftest.${OBJEXT-o} sub/conftest.c \
+ $SHELL ./depcomp $depcc -c $am__minus_obj sub/conftest.c \
>/dev/null 2>conftest.err &&
+ grep sub/conftst1.h sub/conftest.Po > /dev/null 2>&1 &&
grep sub/conftst6.h sub/conftest.Po > /dev/null 2>&1 &&
- grep sub/conftest.${OBJEXT-o} sub/conftest.Po > /dev/null 2>&1 &&
+ grep $am__obj sub/conftest.Po > /dev/null 2>&1 &&
${MAKE-make} -s -f confmf > /dev/null 2>&1; then
# icc doesn't choke on unknown options, it will just issue warnings
# or remarks (even with -Werror). So we grep stderr for any message
@@ -7530,13 +7164,11 @@ else
fi
fi
-echo "$as_me:$LINENO: result: $am_cv_CC_dependencies_compiler_type" >&5
-echo "${ECHO_T}$am_cv_CC_dependencies_compiler_type" >&6
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $am_cv_CC_dependencies_compiler_type" >&5
+$as_echo "$am_cv_CC_dependencies_compiler_type" >&6; }
CCDEPMODE=depmode=$am_cv_CC_dependencies_compiler_type
-
-
-if
+ if
test "x$enable_dependency_tracking" != xno \
&& test "$am_cv_CC_dependencies_compiler_type" = gcc3; then
am__fastdepCC_TRUE=
@@ -7549,17 +7181,18 @@ fi
depcc="$CXX" am_compiler_list=
-echo "$as_me:$LINENO: checking dependency style of $depcc" >&5
-echo $ECHO_N "checking dependency style of $depcc... $ECHO_C" >&6
-if test "${am_cv_CXX_dependencies_compiler_type+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking dependency style of $depcc" >&5
+$as_echo_n "checking dependency style of $depcc... " >&6; }
+if ${am_cv_CXX_dependencies_compiler_type+:} false; then :
+ $as_echo_n "(cached) " >&6
else
if test -z "$AMDEP_TRUE" && test -f "$am_depcomp"; then
# We make a subdir and do the tests there. Otherwise we can end up
# making bogus files that we don't know about and never remove. For
# instance it was reported that on HP-UX the gcc test will end up
- # making a dummy file named `D' -- because `-MD' means `put the output
- # in D'.
+ # making a dummy file named 'D' -- because '-MD' means "put the output
+ # in D".
+ rm -rf conftest.dir
mkdir conftest.dir
# Copy depcomp to subdir because otherwise we won't find it if we're
# using a relative directory.
@@ -7577,6 +7210,11 @@ else
if test "$am_compiler_list" = ""; then
am_compiler_list=`sed -n 's/^#*\([a-zA-Z0-9]*\))$/\1/p' < ./depcomp`
fi
+ am__universal=false
+ case " $depcc " in #(
+ *\ -arch\ *\ -arch\ *) am__universal=true ;;
+ esac
+
for depmode in $am_compiler_list; do
# Setup a source with many dependencies, because some compilers
# like to wrap large dependency lists on column 80 (with \), and
@@ -7588,34 +7226,49 @@ else
: > sub/conftest.c
for i in 1 2 3 4 5 6; do
echo '#include "conftst'$i'.h"' >> sub/conftest.c
- # Using `: > sub/conftst$i.h' creates only sub/conftst1.h with
- # Solaris 8's {/usr,}/bin/sh.
- touch sub/conftst$i.h
+ # Using ": > sub/conftst$i.h" creates only sub/conftst1.h with
+ # Solaris 10 /bin/sh.
+ echo '/* dummy */' > sub/conftst$i.h
done
echo "${am__include} ${am__quote}sub/conftest.Po${am__quote}" > confmf
+ # We check with '-c' and '-o' for the sake of the "dashmstdout"
+ # mode. It turns out that the SunPro C++ compiler does not properly
+ # handle '-M -o', and we need to detect this. Also, some Intel
+ # versions had trouble with output in subdirs.
+ am__obj=sub/conftest.${OBJEXT-o}
+ am__minus_obj="-o $am__obj"
case $depmode in
+ gcc)
+ # This depmode causes a compiler race in universal mode.
+ test "$am__universal" = false || continue
+ ;;
nosideeffect)
- # after this tag, mechanisms are not by side-effect, so they'll
- # only be used when explicitly requested
+ # After this tag, mechanisms are not by side-effect, so they'll
+ # only be used when explicitly requested.
if test "x$enable_dependency_tracking" = xyes; then
continue
else
break
fi
;;
+ msvc7 | msvc7msys | msvisualcpp | msvcmsys)
+ # This compiler won't grok '-c -o', but also, the minuso test has
+ # not run yet. These depmodes are late enough in the game, and
+ # so weak that their functioning should not be impacted.
+ am__obj=conftest.${OBJEXT-o}
+ am__minus_obj=
+ ;;
none) break ;;
esac
- # We check with `-c' and `-o' for the sake of the "dashmstdout"
- # mode. It turns out that the SunPro C++ compiler does not properly
- # handle `-M -o', and we need to detect this.
if depmode=$depmode \
- source=sub/conftest.c object=sub/conftest.${OBJEXT-o} \
+ source=sub/conftest.c object=$am__obj \
depfile=sub/conftest.Po tmpdepfile=sub/conftest.TPo \
- $SHELL ./depcomp $depcc -c -o sub/conftest.${OBJEXT-o} sub/conftest.c \
+ $SHELL ./depcomp $depcc -c $am__minus_obj sub/conftest.c \
>/dev/null 2>conftest.err &&
+ grep sub/conftst1.h sub/conftest.Po > /dev/null 2>&1 &&
grep sub/conftst6.h sub/conftest.Po > /dev/null 2>&1 &&
- grep sub/conftest.${OBJEXT-o} sub/conftest.Po > /dev/null 2>&1 &&
+ grep $am__obj sub/conftest.Po > /dev/null 2>&1 &&
${MAKE-make} -s -f confmf > /dev/null 2>&1; then
# icc doesn't choke on unknown options, it will just issue warnings
# or remarks (even with -Werror). So we grep stderr for any message
@@ -7639,13 +7292,11 @@ else
fi
fi
-echo "$as_me:$LINENO: result: $am_cv_CXX_dependencies_compiler_type" >&5
-echo "${ECHO_T}$am_cv_CXX_dependencies_compiler_type" >&6
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $am_cv_CXX_dependencies_compiler_type" >&5
+$as_echo "$am_cv_CXX_dependencies_compiler_type" >&6; }
CXXDEPMODE=depmode=$am_cv_CXX_dependencies_compiler_type
-
-
-if
+ if
test "x$enable_dependency_tracking" != xno \
&& test "$am_cv_CXX_dependencies_compiler_type" = gcc3; then
am__fastdepCXX_TRUE=
@@ -7659,7 +7310,7 @@ fi
# makefiles to configure
- ac_config_files="$ac_config_files Makefile src/Makefile"
+ac_config_files="$ac_config_files Makefile src/Makefile"
# make it happen
@@ -7681,39 +7332,70 @@ _ACEOF
# The following way of writing the cache mishandles newlines in values,
# but we know of no workaround that is simple, portable, and efficient.
-# So, don't put newlines in cache variables' values.
+# So, we kill variables containing newlines.
# Ultrix sh set writes to stderr and can't be redirected directly,
# and sets the high bit in the cache file unless we assign to the vars.
-{
+(
+ for ac_var in `(set) 2>&1 | sed -n 's/^\([a-zA-Z_][a-zA-Z0-9_]*\)=.*/\1/p'`; do
+ eval ac_val=\$$ac_var
+ case $ac_val in #(
+ *${as_nl}*)
+ case $ac_var in #(
+ *_cv_*) { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: cache variable $ac_var contains a newline" >&5
+$as_echo "$as_me: WARNING: cache variable $ac_var contains a newline" >&2;} ;;
+ esac
+ case $ac_var in #(
+ _ | IFS | as_nl) ;; #(
+ BASH_ARGV | BASH_SOURCE) eval $ac_var= ;; #(
+ *) { eval $ac_var=; unset $ac_var;} ;;
+ esac ;;
+ esac
+ done
+
(set) 2>&1 |
- case `(ac_space=' '; set | grep ac_space) 2>&1` in
- *ac_space=\ *)
- # `set' does not quote correctly, so add quotes (double-quote
- # substitution turns \\\\ into \\, and sed turns \\ into \).
+ case $as_nl`(ac_space=' '; set) 2>&1` in #(
+ *${as_nl}ac_space=\ *)
+ # `set' does not quote correctly, so add quotes: double-quote
+ # substitution turns \\\\ into \\, and sed turns \\ into \.
sed -n \
"s/'/'\\\\''/g;
s/^\\([_$as_cr_alnum]*_cv_[_$as_cr_alnum]*\\)=\\(.*\\)/\\1='\\2'/p"
- ;;
+ ;; #(
*)
# `set' quotes correctly as required by POSIX, so do not add quotes.
- sed -n \
- "s/^\\([_$as_cr_alnum]*_cv_[_$as_cr_alnum]*\\)=\\(.*\\)/\\1=\\2/p"
+ sed -n "/^[_$as_cr_alnum]*_cv_[_$as_cr_alnum]*=/p"
;;
- esac;
-} |
+ esac |
+ sort
+) |
sed '
+ /^ac_cv_env_/b end
t clear
- : clear
+ :clear
s/^\([^=]*\)=\(.*[{}].*\)$/test "${\1+set}" = set || &/
t end
- /^ac_cv_env/!s/^\([^=]*\)=\(.*\)$/\1=${\1=\2}/
- : end' >>confcache
-if diff $cache_file confcache >/dev/null 2>&1; then :; else
- if test -w $cache_file; then
- test "x$cache_file" != "x/dev/null" && echo "updating cache $cache_file"
- cat confcache >$cache_file
+ s/^\([^=]*\)=\(.*\)$/\1=${\1=\2}/
+ :end' >>confcache
+if diff "$cache_file" confcache >/dev/null 2>&1; then :; else
+ if test -w "$cache_file"; then
+ if test "x$cache_file" != "x/dev/null"; then
+ { $as_echo "$as_me:${as_lineno-$LINENO}: updating cache $cache_file" >&5
+$as_echo "$as_me: updating cache $cache_file" >&6;}
+ if test ! -f "$cache_file" || test -h "$cache_file"; then
+ cat confcache >"$cache_file"
+ else
+ case $cache_file in #(
+ */* | ?:*)
+ mv -f confcache "$cache_file"$$ &&
+ mv -f "$cache_file"$$ "$cache_file" ;; #(
+ *)
+ mv -f confcache "$cache_file" ;;
+ esac
+ fi
+ fi
else
- echo "not updating unwritable cache $cache_file"
+ { $as_echo "$as_me:${as_lineno-$LINENO}: not updating unwritable cache $cache_file" >&5
+$as_echo "$as_me: not updating unwritable cache $cache_file" >&6;}
fi
fi
rm -f confcache
@@ -7722,87 +7404,82 @@ test "x$prefix" = xNONE && prefix=$ac_default_prefix
# Let make expand exec_prefix.
test "x$exec_prefix" = xNONE && exec_prefix='${prefix}'
-# VPATH may cause trouble with some makes, so we remove $(srcdir),
-# ${srcdir} and @srcdir@ from VPATH if srcdir is ".", strip leading and
-# trailing colons and then remove the whole line if VPATH becomes empty
-# (actually we leave an empty line to preserve line numbers).
-if test "x$srcdir" = x.; then
- ac_vpsub='/^[ ]*VPATH[ ]*=/{
-s/:*\$(srcdir):*/:/;
-s/:*\${srcdir}:*/:/;
-s/:*@srcdir@:*/:/;
-s/^\([^=]*=[ ]*\):*/\1/;
-s/:*$//;
-s/^[^=]*=[ ]*$//;
-}'
-fi
-
DEFS=-DHAVE_CONFIG_H
ac_libobjs=
ac_ltlibobjs=
+U=
for ac_i in : $LIBOBJS; do test "x$ac_i" = x: && continue
# 1. Remove the extension, and $U if already installed.
- ac_i=`echo "$ac_i" |
- sed 's/\$U\././;s/\.o$//;s/\.obj$//'`
- # 2. Add them.
- ac_libobjs="$ac_libobjs $ac_i\$U.$ac_objext"
- ac_ltlibobjs="$ac_ltlibobjs $ac_i"'$U.lo'
+ ac_script='s/\$U\././;s/\.o$//;s/\.obj$//'
+ ac_i=`$as_echo "$ac_i" | sed "$ac_script"`
+ # 2. Prepend LIBOBJDIR. When used with automake>=1.10 LIBOBJDIR
+ # will be set to the directory where LIBOBJS objects are built.
+ as_fn_append ac_libobjs " \${LIBOBJDIR}$ac_i\$U.$ac_objext"
+ as_fn_append ac_ltlibobjs " \${LIBOBJDIR}$ac_i"'$U.lo'
done
LIBOBJS=$ac_libobjs
LTLIBOBJS=$ac_ltlibobjs
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking that generated files are newer than configure" >&5
+$as_echo_n "checking that generated files are newer than configure... " >&6; }
+ if test -n "$am_sleep_pid"; then
+ # Hide warnings about reused PIDs.
+ wait $am_sleep_pid 2>/dev/null
+ fi
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: done" >&5
+$as_echo "done" >&6; }
+ if test -n "$EXEEXT"; then
+ am__EXEEXT_TRUE=
+ am__EXEEXT_FALSE='#'
+else
+ am__EXEEXT_TRUE='#'
+ am__EXEEXT_FALSE=
+fi
+
if test -z "${AMDEP_TRUE}" && test -z "${AMDEP_FALSE}"; then
- { { echo "$as_me:$LINENO: error: conditional \"AMDEP\" was never defined.
-Usually this means the macro was only invoked conditionally." >&5
-echo "$as_me: error: conditional \"AMDEP\" was never defined.
-Usually this means the macro was only invoked conditionally." >&2;}
- { (exit 1); exit 1; }; }
+ as_fn_error $? "conditional \"AMDEP\" was never defined.
+Usually this means the macro was only invoked conditionally." "$LINENO" 5
fi
if test -z "${am__fastdepCXX_TRUE}" && test -z "${am__fastdepCXX_FALSE}"; then
- { { echo "$as_me:$LINENO: error: conditional \"am__fastdepCXX\" was never defined.
-Usually this means the macro was only invoked conditionally." >&5
-echo "$as_me: error: conditional \"am__fastdepCXX\" was never defined.
-Usually this means the macro was only invoked conditionally." >&2;}
- { (exit 1); exit 1; }; }
+ as_fn_error $? "conditional \"am__fastdepCXX\" was never defined.
+Usually this means the macro was only invoked conditionally." "$LINENO" 5
fi
if test -z "${am__fastdepCXX_TRUE}" && test -z "${am__fastdepCXX_FALSE}"; then
- { { echo "$as_me:$LINENO: error: conditional \"am__fastdepCXX\" was never defined.
-Usually this means the macro was only invoked conditionally." >&5
-echo "$as_me: error: conditional \"am__fastdepCXX\" was never defined.
-Usually this means the macro was only invoked conditionally." >&2;}
- { (exit 1); exit 1; }; }
+ as_fn_error $? "conditional \"am__fastdepCXX\" was never defined.
+Usually this means the macro was only invoked conditionally." "$LINENO" 5
fi
if test -z "${am__fastdepCC_TRUE}" && test -z "${am__fastdepCC_FALSE}"; then
- { { echo "$as_me:$LINENO: error: conditional \"am__fastdepCC\" was never defined.
-Usually this means the macro was only invoked conditionally." >&5
-echo "$as_me: error: conditional \"am__fastdepCC\" was never defined.
-Usually this means the macro was only invoked conditionally." >&2;}
- { (exit 1); exit 1; }; }
+ as_fn_error $? "conditional \"am__fastdepCC\" was never defined.
+Usually this means the macro was only invoked conditionally." "$LINENO" 5
fi
if test -z "${am__fastdepCC_TRUE}" && test -z "${am__fastdepCC_FALSE}"; then
- { { echo "$as_me:$LINENO: error: conditional \"am__fastdepCC\" was never defined.
-Usually this means the macro was only invoked conditionally." >&5
-echo "$as_me: error: conditional \"am__fastdepCC\" was never defined.
-Usually this means the macro was only invoked conditionally." >&2;}
- { (exit 1); exit 1; }; }
+ as_fn_error $? "conditional \"am__fastdepCC\" was never defined.
+Usually this means the macro was only invoked conditionally." "$LINENO" 5
fi
if test -z "${am__fastdepCXX_TRUE}" && test -z "${am__fastdepCXX_FALSE}"; then
- { { echo "$as_me:$LINENO: error: conditional \"am__fastdepCXX\" was never defined.
-Usually this means the macro was only invoked conditionally." >&5
-echo "$as_me: error: conditional \"am__fastdepCXX\" was never defined.
-Usually this means the macro was only invoked conditionally." >&2;}
- { (exit 1); exit 1; }; }
+ as_fn_error $? "conditional \"am__fastdepCXX\" was never defined.
+Usually this means the macro was only invoked conditionally." "$LINENO" 5
+fi
+ if test -n "$EXEEXT"; then
+ am__EXEEXT_TRUE=
+ am__EXEEXT_FALSE='#'
+else
+ am__EXEEXT_TRUE='#'
+ am__EXEEXT_FALSE=
fi
-: ${CONFIG_STATUS=./config.status}
+
+: "${CONFIG_STATUS=./config.status}"
+ac_write_fail=0
ac_clean_files_save=$ac_clean_files
ac_clean_files="$ac_clean_files $CONFIG_STATUS"
-{ echo "$as_me:$LINENO: creating $CONFIG_STATUS" >&5
-echo "$as_me: creating $CONFIG_STATUS" >&6;}
-cat >$CONFIG_STATUS <<_ACEOF
+{ $as_echo "$as_me:${as_lineno-$LINENO}: creating $CONFIG_STATUS" >&5
+$as_echo "$as_me: creating $CONFIG_STATUS" >&6;}
+as_write_fail=0
+cat >$CONFIG_STATUS <<_ASEOF || as_write_fail=1
#! $SHELL
# Generated by $as_me.
# Run this file to recreate the current configuration.
@@ -7812,81 +7489,253 @@ cat >$CONFIG_STATUS <<_ACEOF
debug=false
ac_cs_recheck=false
ac_cs_silent=false
-SHELL=\${CONFIG_SHELL-$SHELL}
-_ACEOF
-
-cat >>$CONFIG_STATUS <<\_ACEOF
-## --------------------- ##
-## M4sh Initialization. ##
-## --------------------- ##
-# Be Bourne compatible
-if test -n "${ZSH_VERSION+set}" && (emulate sh) >/dev/null 2>&1; then
+SHELL=\${CONFIG_SHELL-$SHELL}
+export SHELL
+_ASEOF
+cat >>$CONFIG_STATUS <<\_ASEOF || as_write_fail=1
+## -------------------- ##
+## M4sh Initialization. ##
+## -------------------- ##
+
+# Be more Bourne compatible
+DUALCASE=1; export DUALCASE # for MKS sh
+if test -n "${ZSH_VERSION+set}" && (emulate sh) >/dev/null 2>&1; then :
emulate sh
NULLCMD=:
- # Zsh 3.x and 4.x performs word splitting on ${1+"$@"}, which
+ # Pre-4.2 versions of Zsh do word splitting on ${1+"$@"}, which
# is contrary to our usage. Disable this feature.
alias -g '${1+"$@"}'='"$@"'
-elif test -n "${BASH_VERSION+set}" && (set -o posix) >/dev/null 2>&1; then
- set -o posix
+ setopt NO_GLOB_SUBST
+else
+ case `(set -o) 2>/dev/null` in #(
+ *posix*) :
+ set -o posix ;; #(
+ *) :
+ ;;
+esac
fi
-DUALCASE=1; export DUALCASE # for MKS sh
-# Support unset when possible.
-if ( (MAIL=60; unset MAIL) || exit) >/dev/null 2>&1; then
- as_unset=unset
-else
- as_unset=false
+
+as_nl='
+'
+export as_nl
+# Printing a long string crashes Solaris 7 /usr/bin/printf.
+as_echo='\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\'
+as_echo=$as_echo$as_echo$as_echo$as_echo$as_echo
+as_echo=$as_echo$as_echo$as_echo$as_echo$as_echo$as_echo
+# Prefer a ksh shell builtin over an external printf program on Solaris,
+# but without wasting forks for bash or zsh.
+if test -z "$BASH_VERSION$ZSH_VERSION" \
+ && (test "X`print -r -- $as_echo`" = "X$as_echo") 2>/dev/null; then
+ as_echo='print -r --'
+ as_echo_n='print -rn --'
+elif (test "X`printf %s $as_echo`" = "X$as_echo") 2>/dev/null; then
+ as_echo='printf %s\n'
+ as_echo_n='printf %s'
+else
+ if test "X`(/usr/ucb/echo -n -n $as_echo) 2>/dev/null`" = "X-n $as_echo"; then
+ as_echo_body='eval /usr/ucb/echo -n "$1$as_nl"'
+ as_echo_n='/usr/ucb/echo -n'
+ else
+ as_echo_body='eval expr "X$1" : "X\\(.*\\)"'
+ as_echo_n_body='eval
+ arg=$1;
+ case $arg in #(
+ *"$as_nl"*)
+ expr "X$arg" : "X\\(.*\\)$as_nl";
+ arg=`expr "X$arg" : ".*$as_nl\\(.*\\)"`;;
+ esac;
+ expr "X$arg" : "X\\(.*\\)" | tr -d "$as_nl"
+ '
+ export as_echo_n_body
+ as_echo_n='sh -c $as_echo_n_body as_echo'
+ fi
+ export as_echo_body
+ as_echo='sh -c $as_echo_body as_echo'
+fi
+
+# The user is always right.
+if test "${PATH_SEPARATOR+set}" != set; then
+ PATH_SEPARATOR=:
+ (PATH='/bin;/bin'; FPATH=$PATH; sh -c :) >/dev/null 2>&1 && {
+ (PATH='/bin:/bin'; FPATH=$PATH; sh -c :) >/dev/null 2>&1 ||
+ PATH_SEPARATOR=';'
+ }
fi
-# Work around bugs in pre-3.0 UWIN ksh.
-$as_unset ENV MAIL MAILPATH
+# IFS
+# We need space, tab and new line, in precisely that order. Quoting is
+# there to prevent editors from complaining about space-tab.
+# (If _AS_PATH_WALK were called with IFS unset, it would disable word
+# splitting by setting IFS to empty value.)
+IFS=" "" $as_nl"
+
+# Find who we are. Look in the path if we contain no directory separator.
+as_myself=
+case $0 in #((
+ *[\\/]* ) as_myself=$0 ;;
+ *) as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
+for as_dir in $PATH
+do
+ IFS=$as_save_IFS
+ test -z "$as_dir" && as_dir=.
+ test -r "$as_dir/$0" && as_myself=$as_dir/$0 && break
+ done
+IFS=$as_save_IFS
+
+ ;;
+esac
+# We did not find ourselves, most probably we were run as `sh COMMAND'
+# in which case we are not to be found in the path.
+if test "x$as_myself" = x; then
+ as_myself=$0
+fi
+if test ! -f "$as_myself"; then
+ $as_echo "$as_myself: error: cannot find myself; rerun with an absolute file name" >&2
+ exit 1
+fi
+
+# Unset variables that we do not need and which cause bugs (e.g. in
+# pre-3.0 UWIN ksh). But do not cause bugs in bash 2.01; the "|| exit 1"
+# suppresses any "Segmentation fault" message there. '((' could
+# trigger a bug in pdksh 5.2.14.
+for as_var in BASH_ENV ENV MAIL MAILPATH
+do eval test x\${$as_var+set} = xset \
+ && ( (unset $as_var) || exit 1) >/dev/null 2>&1 && unset $as_var || :
+done
PS1='$ '
PS2='> '
PS4='+ '
# NLS nuisances.
-for as_var in \
- LANG LANGUAGE LC_ADDRESS LC_ALL LC_COLLATE LC_CTYPE LC_IDENTIFICATION \
- LC_MEASUREMENT LC_MESSAGES LC_MONETARY LC_NAME LC_NUMERIC LC_PAPER \
- LC_TELEPHONE LC_TIME
-do
- if (set +x; test -z "`(eval $as_var=C; export $as_var) 2>&1`"); then
- eval $as_var=C; export $as_var
- else
- $as_unset $as_var
+LC_ALL=C
+export LC_ALL
+LANGUAGE=C
+export LANGUAGE
+
+# CDPATH.
+(unset CDPATH) >/dev/null 2>&1 && unset CDPATH
+
+
+# as_fn_error STATUS ERROR [LINENO LOG_FD]
+# ----------------------------------------
+# Output "`basename $0`: error: ERROR" to stderr. If LINENO and LOG_FD are
+# provided, also output the error to LOG_FD, referencing LINENO. Then exit the
+# script with STATUS, using 1 if that was 0.
+as_fn_error ()
+{
+ as_status=$1; test $as_status -eq 0 && as_status=1
+ if test "$4"; then
+ as_lineno=${as_lineno-"$3"} as_lineno_stack=as_lineno_stack=$as_lineno_stack
+ $as_echo "$as_me:${as_lineno-$LINENO}: error: $2" >&$4
fi
-done
+ $as_echo "$as_me: error: $2" >&2
+ as_fn_exit $as_status
+} # as_fn_error
+
-# Required to use basename.
-if expr a : '\(a\)' >/dev/null 2>&1; then
+# as_fn_set_status STATUS
+# -----------------------
+# Set $? to STATUS, without forking.
+as_fn_set_status ()
+{
+ return $1
+} # as_fn_set_status
+
+# as_fn_exit STATUS
+# -----------------
+# Exit the shell with STATUS, even in a "trap 0" or "set -e" context.
+as_fn_exit ()
+{
+ set +e
+ as_fn_set_status $1
+ exit $1
+} # as_fn_exit
+
+# as_fn_unset VAR
+# ---------------
+# Portably unset VAR.
+as_fn_unset ()
+{
+ { eval $1=; unset $1;}
+}
+as_unset=as_fn_unset
+# as_fn_append VAR VALUE
+# ----------------------
+# Append the text in VALUE to the end of the definition contained in VAR. Take
+# advantage of any shell optimizations that allow amortized linear growth over
+# repeated appends, instead of the typical quadratic growth present in naive
+# implementations.
+if (eval "as_var=1; as_var+=2; test x\$as_var = x12") 2>/dev/null; then :
+ eval 'as_fn_append ()
+ {
+ eval $1+=\$2
+ }'
+else
+ as_fn_append ()
+ {
+ eval $1=\$$1\$2
+ }
+fi # as_fn_append
+
+# as_fn_arith ARG...
+# ------------------
+# Perform arithmetic evaluation on the ARGs, and store the result in the
+# global $as_val. Take advantage of shells that can avoid forks. The arguments
+# must be portable across $(()) and expr.
+if (eval "test \$(( 1 + 1 )) = 2") 2>/dev/null; then :
+ eval 'as_fn_arith ()
+ {
+ as_val=$(( $* ))
+ }'
+else
+ as_fn_arith ()
+ {
+ as_val=`expr "$@" || test $? -eq 1`
+ }
+fi # as_fn_arith
+
+
+if expr a : '\(a\)' >/dev/null 2>&1 &&
+ test "X`expr 00001 : '.*\(...\)'`" = X001; then
as_expr=expr
else
as_expr=false
fi
-if (basename /) >/dev/null 2>&1 && test "X`basename / 2>&1`" = "X/"; then
+if (basename -- /) >/dev/null 2>&1 && test "X`basename -- / 2>&1`" = "X/"; then
as_basename=basename
else
as_basename=false
fi
+if (as_dir=`dirname -- /` && test "X$as_dir" = X/) >/dev/null 2>&1; then
+ as_dirname=dirname
+else
+ as_dirname=false
+fi
-# Name of the executable.
-as_me=`$as_basename "$0" ||
+as_me=`$as_basename -- "$0" ||
$as_expr X/"$0" : '.*/\([^/][^/]*\)/*$' \| \
X"$0" : 'X\(//\)$' \| \
- X"$0" : 'X\(/\)$' \| \
- . : '\(.\)' 2>/dev/null ||
-echo X/"$0" |
- sed '/^.*\/\([^/][^/]*\)\/*$/{ s//\1/; q; }
- /^X\/\(\/\/\)$/{ s//\1/; q; }
- /^X\/\(\/\).*/{ s//\1/; q; }
- s/.*/./; q'`
-
+ X"$0" : 'X\(/\)' \| . 2>/dev/null ||
+$as_echo X/"$0" |
+ sed '/^.*\/\([^/][^/]*\)\/*$/{
+ s//\1/
+ q
+ }
+ /^X\/\(\/\/\)$/{
+ s//\1/
+ q
+ }
+ /^X\/\(\/\).*/{
+ s//\1/
+ q
+ }
+ s/.*/./; q'`
-# PATH needs CR, and LINENO needs CR and PATH.
# Avoid depending upon Character Ranges.
as_cr_letters='abcdefghijklmnopqrstuvwxyz'
as_cr_LETTERS='ABCDEFGHIJKLMNOPQRSTUVWXYZ'
@@ -7894,148 +7743,111 @@ as_cr_Letters=$as_cr_letters$as_cr_LETTERS
as_cr_digits='0123456789'
as_cr_alnum=$as_cr_Letters$as_cr_digits
-# The user is always right.
-if test "${PATH_SEPARATOR+set}" != set; then
- echo "#! /bin/sh" >conf$$.sh
- echo "exit 0" >>conf$$.sh
- chmod +x conf$$.sh
- if (PATH="/nonexistent;."; conf$$.sh) >/dev/null 2>&1; then
- PATH_SEPARATOR=';'
+ECHO_C= ECHO_N= ECHO_T=
+case `echo -n x` in #(((((
+-n*)
+ case `echo 'xy\c'` in
+ *c*) ECHO_T=' ';; # ECHO_T is single tab character.
+ xy) ECHO_C='\c';;
+ *) echo `echo ksh88 bug on AIX 6.1` > /dev/null
+ ECHO_T=' ';;
+ esac;;
+*)
+ ECHO_N='-n';;
+esac
+
+rm -f conf$$ conf$$.exe conf$$.file
+if test -d conf$$.dir; then
+ rm -f conf$$.dir/conf$$.file
+else
+ rm -f conf$$.dir
+ mkdir conf$$.dir 2>/dev/null
+fi
+if (echo >conf$$.file) 2>/dev/null; then
+ if ln -s conf$$.file conf$$ 2>/dev/null; then
+ as_ln_s='ln -s'
+ # ... but there are two gotchas:
+ # 1) On MSYS, both `ln -s file dir' and `ln file dir' fail.
+ # 2) DJGPP < 2.04 has no symlinks; `ln -s' creates a wrapper executable.
+ # In both cases, we have to default to `cp -pR'.
+ ln -s conf$$.file conf$$.dir 2>/dev/null && test ! -f conf$$.exe ||
+ as_ln_s='cp -pR'
+ elif ln conf$$.file conf$$ 2>/dev/null; then
+ as_ln_s=ln
else
- PATH_SEPARATOR=:
+ as_ln_s='cp -pR'
fi
- rm -f conf$$.sh
+else
+ as_ln_s='cp -pR'
fi
+rm -f conf$$ conf$$.exe conf$$.dir/conf$$.file conf$$.file
+rmdir conf$$.dir 2>/dev/null
- as_lineno_1=$LINENO
- as_lineno_2=$LINENO
- as_lineno_3=`(expr $as_lineno_1 + 1) 2>/dev/null`
- test "x$as_lineno_1" != "x$as_lineno_2" &&
- test "x$as_lineno_3" = "x$as_lineno_2" || {
- # Find who we are. Look in the path if we contain no path at all
- # relative or not.
- case $0 in
- *[\\/]* ) as_myself=$0 ;;
- *) as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
-for as_dir in $PATH
-do
- IFS=$as_save_IFS
- test -z "$as_dir" && as_dir=.
- test -r "$as_dir/$0" && as_myself=$as_dir/$0 && break
-done
+# as_fn_mkdir_p
+# -------------
+# Create "$as_dir" as a directory, including parents if necessary.
+as_fn_mkdir_p ()
+{
- ;;
- esac
- # We did not find ourselves, most probably we were run as `sh COMMAND'
- # in which case we are not to be found in the path.
- if test "x$as_myself" = x; then
- as_myself=$0
- fi
- if test ! -f "$as_myself"; then
- { { echo "$as_me:$LINENO: error: cannot find myself; rerun with an absolute path" >&5
-echo "$as_me: error: cannot find myself; rerun with an absolute path" >&2;}
- { (exit 1); exit 1; }; }
- fi
- case $CONFIG_SHELL in
- '')
- as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
-for as_dir in /bin$PATH_SEPARATOR/usr/bin$PATH_SEPARATOR$PATH
-do
- IFS=$as_save_IFS
- test -z "$as_dir" && as_dir=.
- for as_base in sh bash ksh sh5; do
- case $as_dir in
- /*)
- if ("$as_dir/$as_base" -c '
- as_lineno_1=$LINENO
- as_lineno_2=$LINENO
- as_lineno_3=`(expr $as_lineno_1 + 1) 2>/dev/null`
- test "x$as_lineno_1" != "x$as_lineno_2" &&
- test "x$as_lineno_3" = "x$as_lineno_2" ') 2>/dev/null; then
- $as_unset BASH_ENV || test "${BASH_ENV+set}" != set || { BASH_ENV=; export BASH_ENV; }
- $as_unset ENV || test "${ENV+set}" != set || { ENV=; export ENV; }
- CONFIG_SHELL=$as_dir/$as_base
- export CONFIG_SHELL
- exec "$CONFIG_SHELL" "$0" ${1+"$@"}
- fi;;
- esac
- done
-done
-;;
+ case $as_dir in #(
+ -*) as_dir=./$as_dir;;
esac
+ test -d "$as_dir" || eval $as_mkdir_p || {
+ as_dirs=
+ while :; do
+ case $as_dir in #(
+ *\'*) as_qdir=`$as_echo "$as_dir" | sed "s/'/'\\\\\\\\''/g"`;; #'(
+ *) as_qdir=$as_dir;;
+ esac
+ as_dirs="'$as_qdir' $as_dirs"
+ as_dir=`$as_dirname -- "$as_dir" ||
+$as_expr X"$as_dir" : 'X\(.*[^/]\)//*[^/][^/]*/*$' \| \
+ X"$as_dir" : 'X\(//\)[^/]' \| \
+ X"$as_dir" : 'X\(//\)$' \| \
+ X"$as_dir" : 'X\(/\)' \| . 2>/dev/null ||
+$as_echo X"$as_dir" |
+ sed '/^X\(.*[^/]\)\/\/*[^/][^/]*\/*$/{
+ s//\1/
+ q
+ }
+ /^X\(\/\/\)[^/].*/{
+ s//\1/
+ q
+ }
+ /^X\(\/\/\)$/{
+ s//\1/
+ q
+ }
+ /^X\(\/\).*/{
+ s//\1/
+ q
+ }
+ s/.*/./; q'`
+ test -d "$as_dir" && break
+ done
+ test -z "$as_dirs" || eval "mkdir $as_dirs"
+ } || test -d "$as_dir" || as_fn_error $? "cannot create directory $as_dir"
- # Create $as_me.lineno as a copy of $as_myself, but with $LINENO
- # uniformly replaced by the line number. The first 'sed' inserts a
- # line-number line before each line; the second 'sed' does the real
- # work. The second script uses 'N' to pair each line-number line
- # with the numbered line, and appends trailing '-' during
- # substitution so that $LINENO is not a special case at line end.
- # (Raja R Harinath suggested sed '=', and Paul Eggert wrote the
- # second 'sed' script. Blame Lee E. McMahon for sed's syntax. :-)
- sed '=' <$as_myself |
- sed '
- N
- s,$,-,
- : loop
- s,^\(['$as_cr_digits']*\)\(.*\)[$]LINENO\([^'$as_cr_alnum'_]\),\1\2\1\3,
- t loop
- s,-$,,
- s,^['$as_cr_digits']*\n,,
- ' >$as_me.lineno &&
- chmod +x $as_me.lineno ||
- { { echo "$as_me:$LINENO: error: cannot create $as_me.lineno; rerun with a POSIX shell" >&5
-echo "$as_me: error: cannot create $as_me.lineno; rerun with a POSIX shell" >&2;}
- { (exit 1); exit 1; }; }
-
- # Don't try to exec as it changes $[0], causing all sort of problems
- # (the dirname of $[0] is not the place where we might find the
- # original and so on. Autoconf is especially sensible to this).
- . ./$as_me.lineno
- # Exit status is that of the last command.
- exit
-}
-
-
-case `echo "testing\c"; echo 1,2,3`,`echo -n testing; echo 1,2,3` in
- *c*,-n*) ECHO_N= ECHO_C='
-' ECHO_T=' ' ;;
- *c*,* ) ECHO_N=-n ECHO_C= ECHO_T= ;;
- *) ECHO_N= ECHO_C='\c' ECHO_T= ;;
-esac
-
-if expr a : '\(a\)' >/dev/null 2>&1; then
- as_expr=expr
-else
- as_expr=false
-fi
-
-rm -f conf$$ conf$$.exe conf$$.file
-echo >conf$$.file
-if ln -s conf$$.file conf$$ 2>/dev/null; then
- # We could just check for DJGPP; but this test a) works b) is more generic
- # and c) will remain valid once DJGPP supports symlinks (DJGPP 2.04).
- if test -f conf$$.exe; then
- # Don't use ln at all; we don't have any links
- as_ln_s='cp -p'
- else
- as_ln_s='ln -s'
- fi
-elif ln conf$$.file conf$$ 2>/dev/null; then
- as_ln_s=ln
-else
- as_ln_s='cp -p'
-fi
-rm -f conf$$ conf$$.exe conf$$.file
+} # as_fn_mkdir_p
if mkdir -p . 2>/dev/null; then
- as_mkdir_p=:
+ as_mkdir_p='mkdir -p "$as_dir"'
else
test -d ./-p && rmdir ./-p
as_mkdir_p=false
fi
-as_executable_p="test -f"
+
+# as_fn_executable_p FILE
+# -----------------------
+# Test if FILE is an executable regular file.
+as_fn_executable_p ()
+{
+ test -f "$1" && test -x "$1"
+} # as_fn_executable_p
+as_test_x='test -x'
+as_executable_p=as_fn_executable_p
# Sed expression to map a string onto a valid CPP name.
as_tr_cpp="eval sed 'y%*$as_cr_letters%P$as_cr_LETTERS%;s%[^_$as_cr_alnum]%_%g'"
@@ -8044,31 +7856,20 @@ as_tr_cpp="eval sed 'y%*$as_cr_letters%P$as_cr_LETTERS%;s%[^_$as_cr_alnum]%_%g'"
as_tr_sh="eval sed 'y%*+%pp%;s%[^_$as_cr_alnum]%_%g'"
-# IFS
-# We need space, tab and new line, in precisely that order.
-as_nl='
-'
-IFS=" $as_nl"
-
-# CDPATH.
-$as_unset CDPATH
-
exec 6>&1
-
-# Open the log real soon, to keep \$[0] and so on meaningful, and to
+## ----------------------------------- ##
+## Main body of $CONFIG_STATUS script. ##
+## ----------------------------------- ##
+_ASEOF
+test $as_write_fail = 0 && chmod +x $CONFIG_STATUS || ac_write_fail=1
+
+cat >>$CONFIG_STATUS <<\_ACEOF || ac_write_fail=1
+# Save the log message, to keep $0 and so on meaningful, and to
# report actual input values of CONFIG_FILES etc. instead of their
-# values after options handling. Logging --version etc. is OK.
-exec 5>>config.log
-{
- echo
- sed 'h;s/./-/g;s/^.../## /;s/...$/ ##/;p;x;p;x' <<_ASBOX
-## Running $as_me. ##
-_ASBOX
-} >&5
-cat >&5 <<_CSEOF
-
-This file was extended by tophat $as_me 2.0.13, which was
-generated by GNU Autoconf 2.59. Invocation command line was
+# values after options handling.
+ac_log="
+This file was extended by tophat $as_me 2.0.14, which was
+generated by GNU Autoconf 2.69. Invocation command line was
CONFIG_FILES = $CONFIG_FILES
CONFIG_HEADERS = $CONFIG_HEADERS
@@ -8076,45 +7877,47 @@ generated by GNU Autoconf 2.59. Invocation command line was
CONFIG_COMMANDS = $CONFIG_COMMANDS
$ $0 $@
-_CSEOF
-echo "on `(hostname || uname -n) 2>/dev/null | sed 1q`" >&5
-echo >&5
+on `(hostname || uname -n) 2>/dev/null | sed 1q`
+"
+
_ACEOF
-# Files that config.status was made for.
-if test -n "$ac_config_files"; then
- echo "config_files=\"$ac_config_files\"" >>$CONFIG_STATUS
-fi
+case $ac_config_files in *"
+"*) set x $ac_config_files; shift; ac_config_files=$*;;
+esac
-if test -n "$ac_config_headers"; then
- echo "config_headers=\"$ac_config_headers\"" >>$CONFIG_STATUS
-fi
+case $ac_config_headers in *"
+"*) set x $ac_config_headers; shift; ac_config_headers=$*;;
+esac
-if test -n "$ac_config_links"; then
- echo "config_links=\"$ac_config_links\"" >>$CONFIG_STATUS
-fi
-if test -n "$ac_config_commands"; then
- echo "config_commands=\"$ac_config_commands\"" >>$CONFIG_STATUS
-fi
+cat >>$CONFIG_STATUS <<_ACEOF || ac_write_fail=1
+# Files that config.status was made for.
+config_files="$ac_config_files"
+config_headers="$ac_config_headers"
+config_commands="$ac_config_commands"
-cat >>$CONFIG_STATUS <<\_ACEOF
+_ACEOF
+cat >>$CONFIG_STATUS <<\_ACEOF || ac_write_fail=1
ac_cs_usage="\
-\`$as_me' instantiates files from templates according to the
-current configuration.
+\`$as_me' instantiates files and other configuration actions
+from templates according to the current configuration. Unless the files
+and actions are specified as TAGs, all are instantiated by default.
-Usage: $0 [OPTIONS] [FILE]...
+Usage: $0 [OPTION]... [TAG]...
-h, --help print this help, then exit
- -V, --version print version number, then exit
- -q, --quiet do not print progress messages
+ -V, --version print version number and configuration settings, then exit
+ --config print configuration, then exit
+ -q, --quiet, --silent
+ do not print progress messages
-d, --debug don't remove temporary files
--recheck update $as_me by reconfiguring in the same conditions
- --file=FILE[:TEMPLATE]
- instantiate the configuration file FILE
- --header=FILE[:TEMPLATE]
- instantiate the configuration header FILE
+ --file=FILE[:TEMPLATE]
+ instantiate the configuration file FILE
+ --header=FILE[:TEMPLATE]
+ instantiate the configuration header FILE
Configuration files:
$config_files
@@ -8125,84 +7928,92 @@ $config_headers
Configuration commands:
$config_commands
-Report bugs to <bug-autoconf at gnu.org>."
-_ACEOF
+Report bugs to <tophat.cufflinks at gmail.com>."
-cat >>$CONFIG_STATUS <<_ACEOF
+_ACEOF
+cat >>$CONFIG_STATUS <<_ACEOF || ac_write_fail=1
+ac_cs_config="`$as_echo "$ac_configure_args" | sed 's/^ //; s/[\\""\`\$]/\\\\&/g'`"
ac_cs_version="\\
-tophat config.status 2.0.13
-configured by $0, generated by GNU Autoconf 2.59,
- with options \\"`echo "$ac_configure_args" | sed 's/[\\""\`\$]/\\\\&/g'`\\"
+tophat config.status 2.0.14
+configured by $0, generated by GNU Autoconf 2.69,
+ with options \\"\$ac_cs_config\\"
-Copyright (C) 2003 Free Software Foundation, Inc.
+Copyright (C) 2012 Free Software Foundation, Inc.
This config.status script is free software; the Free Software Foundation
gives unlimited permission to copy, distribute and modify it."
-srcdir=$srcdir
-INSTALL="$INSTALL"
+
+ac_pwd='$ac_pwd'
+srcdir='$srcdir'
+INSTALL='$INSTALL'
+MKDIR_P='$MKDIR_P'
+AWK='$AWK'
+test -n "\$AWK" || AWK=awk
_ACEOF
-cat >>$CONFIG_STATUS <<\_ACEOF
-# If no file are specified by the user, then we need to provide default
-# value. By we need to know if files were specified by the user.
+cat >>$CONFIG_STATUS <<\_ACEOF || ac_write_fail=1
+# The default lists apply if the user does not specify any file.
ac_need_defaults=:
while test $# != 0
do
case $1 in
- --*=*)
- ac_option=`expr "x$1" : 'x\([^=]*\)='`
- ac_optarg=`expr "x$1" : 'x[^=]*=\(.*\)'`
+ --*=?*)
+ ac_option=`expr "X$1" : 'X\([^=]*\)='`
+ ac_optarg=`expr "X$1" : 'X[^=]*=\(.*\)'`
+ ac_shift=:
+ ;;
+ --*=)
+ ac_option=`expr "X$1" : 'X\([^=]*\)='`
+ ac_optarg=
ac_shift=:
;;
- -*)
+ *)
ac_option=$1
ac_optarg=$2
ac_shift=shift
;;
- *) # This is not an option, so the user has probably given explicit
- # arguments.
- ac_option=$1
- ac_need_defaults=false;;
esac
case $ac_option in
# Handling of the options.
-_ACEOF
-cat >>$CONFIG_STATUS <<\_ACEOF
-recheck | --recheck | --rechec | --reche | --rech | --rec | --re | --r)
ac_cs_recheck=: ;;
- --version | --vers* | -V )
- echo "$ac_cs_version"; exit 0 ;;
- --he | --h)
- # Conflict between --help and --header
- { { echo "$as_me:$LINENO: error: ambiguous option: $1
-Try \`$0 --help' for more information." >&5
-echo "$as_me: error: ambiguous option: $1
-Try \`$0 --help' for more information." >&2;}
- { (exit 1); exit 1; }; };;
- --help | --hel | -h )
- echo "$ac_cs_usage"; exit 0 ;;
- --debug | --d* | -d )
+ --version | --versio | --versi | --vers | --ver | --ve | --v | -V )
+ $as_echo "$ac_cs_version"; exit ;;
+ --config | --confi | --conf | --con | --co | --c )
+ $as_echo "$ac_cs_config"; exit ;;
+ --debug | --debu | --deb | --de | --d | -d )
debug=: ;;
--file | --fil | --fi | --f )
$ac_shift
- CONFIG_FILES="$CONFIG_FILES $ac_optarg"
+ case $ac_optarg in
+ *\'*) ac_optarg=`$as_echo "$ac_optarg" | sed "s/'/'\\\\\\\\''/g"` ;;
+ '') as_fn_error $? "missing file argument" ;;
+ esac
+ as_fn_append CONFIG_FILES " '$ac_optarg'"
ac_need_defaults=false;;
--header | --heade | --head | --hea )
$ac_shift
- CONFIG_HEADERS="$CONFIG_HEADERS $ac_optarg"
+ case $ac_optarg in
+ *\'*) ac_optarg=`$as_echo "$ac_optarg" | sed "s/'/'\\\\\\\\''/g"` ;;
+ esac
+ as_fn_append CONFIG_HEADERS " '$ac_optarg'"
ac_need_defaults=false;;
+ --he | --h)
+ # Conflict between --help and --header
+ as_fn_error $? "ambiguous option: \`$1'
+Try \`$0 --help' for more information.";;
+ --help | --hel | -h )
+ $as_echo "$ac_cs_usage"; exit ;;
-q | -quiet | --quiet | --quie | --qui | --qu | --q \
| -silent | --silent | --silen | --sile | --sil | --si | --s)
ac_cs_silent=: ;;
# This is an error.
- -*) { { echo "$as_me:$LINENO: error: unrecognized option: $1
-Try \`$0 --help' for more information." >&5
-echo "$as_me: error: unrecognized option: $1
-Try \`$0 --help' for more information." >&2;}
- { (exit 1); exit 1; }; } ;;
+ -*) as_fn_error $? "unrecognized option: \`$1'
+Try \`$0 --help' for more information." ;;
- *) ac_config_targets="$ac_config_targets $1" ;;
+ *) as_fn_append ac_config_targets " $1"
+ ac_need_defaults=false ;;
esac
shift
@@ -8216,40 +8027,52 @@ if $ac_cs_silent; then
fi
_ACEOF
-cat >>$CONFIG_STATUS <<_ACEOF
+cat >>$CONFIG_STATUS <<_ACEOF || ac_write_fail=1
if \$ac_cs_recheck; then
- echo "running $SHELL $0 " $ac_configure_args \$ac_configure_extra_args " --no-create --no-recursion" >&6
- exec $SHELL $0 $ac_configure_args \$ac_configure_extra_args --no-create --no-recursion
+ set X $SHELL '$0' $ac_configure_args \$ac_configure_extra_args --no-create --no-recursion
+ shift
+ \$as_echo "running CONFIG_SHELL=$SHELL \$*" >&6
+ CONFIG_SHELL='$SHELL'
+ export CONFIG_SHELL
+ exec "\$@"
fi
_ACEOF
+cat >>$CONFIG_STATUS <<\_ACEOF || ac_write_fail=1
+exec 5>>config.log
+{
+ echo
+ sed 'h;s/./-/g;s/^.../## /;s/...$/ ##/;p;x;p;x' <<_ASBOX
+## Running $as_me. ##
+_ASBOX
+ $as_echo "$ac_log"
+} >&5
-cat >>$CONFIG_STATUS <<_ACEOF
+_ACEOF
+cat >>$CONFIG_STATUS <<_ACEOF || ac_write_fail=1
#
-# INIT-COMMANDS section.
+# INIT-COMMANDS
#
-
AMDEP_TRUE="$AMDEP_TRUE" ac_aux_dir="$ac_aux_dir"
_ACEOF
+cat >>$CONFIG_STATUS <<\_ACEOF || ac_write_fail=1
-
-cat >>$CONFIG_STATUS <<\_ACEOF
+# Handling of arguments.
for ac_config_target in $ac_config_targets
do
- case "$ac_config_target" in
- # Handling of arguments.
- "Makefile" ) CONFIG_FILES="$CONFIG_FILES Makefile" ;;
- "src/Makefile" ) CONFIG_FILES="$CONFIG_FILES src/Makefile" ;;
- "depfiles" ) CONFIG_COMMANDS="$CONFIG_COMMANDS depfiles" ;;
- "config.h" ) CONFIG_HEADERS="$CONFIG_HEADERS config.h" ;;
- *) { { echo "$as_me:$LINENO: error: invalid argument: $ac_config_target" >&5
-echo "$as_me: error: invalid argument: $ac_config_target" >&2;}
- { (exit 1); exit 1; }; };;
+ case $ac_config_target in
+ "config.h") CONFIG_HEADERS="$CONFIG_HEADERS config.h" ;;
+ "depfiles") CONFIG_COMMANDS="$CONFIG_COMMANDS depfiles" ;;
+ "Makefile") CONFIG_FILES="$CONFIG_FILES Makefile" ;;
+ "src/Makefile") CONFIG_FILES="$CONFIG_FILES src/Makefile" ;;
+
+ *) as_fn_error $? "invalid argument: \`$ac_config_target'" "$LINENO" 5;;
esac
done
+
# If the user did not use the arguments to specify the items to instantiate,
# then the envvar interface is used. Set only those that are not.
# We use the long form for the default assignment because of an extremely
@@ -8261,840 +8084,689 @@ if $ac_need_defaults; then
fi
# Have a temporary directory for convenience. Make it in the build tree
-# simply because there is no reason to put it here, and in addition,
+# simply because there is no reason against having it here, and in addition,
# creating and moving files from /tmp can sometimes cause problems.
-# Create a temporary directory, and hook for its removal unless debugging.
+# Hook for its removal unless debugging.
+# Note that there is a small window in which the directory will not be cleaned:
+# after its creation but before its name has been assigned to `$tmp'.
$debug ||
{
- trap 'exit_status=$?; rm -rf $tmp && exit $exit_status' 0
- trap '{ (exit 1); exit 1; }' 1 2 13 15
+ tmp= ac_tmp=
+ trap 'exit_status=$?
+ : "${ac_tmp:=$tmp}"
+ { test ! -d "$ac_tmp" || rm -fr "$ac_tmp"; } && exit $exit_status
+' 0
+ trap 'as_fn_exit 1' 1 2 13 15
}
-
# Create a (secure) tmp directory for tmp files.
{
- tmp=`(umask 077 && mktemp -d -q "./confstatXXXXXX") 2>/dev/null` &&
- test -n "$tmp" && test -d "$tmp"
+ tmp=`(umask 077 && mktemp -d "./confXXXXXX") 2>/dev/null` &&
+ test -d "$tmp"
} ||
{
- tmp=./confstat$$-$RANDOM
- (umask 077 && mkdir $tmp)
-} ||
+ tmp=./conf$$-$RANDOM
+ (umask 077 && mkdir "$tmp")
+} || as_fn_error $? "cannot create a temporary directory in ." "$LINENO" 5
+ac_tmp=$tmp
+
+# Set up the scripts for CONFIG_FILES section.
+# No need to generate them if there are no CONFIG_FILES.
+# This happens for instance with `./config.status config.h'.
+if test -n "$CONFIG_FILES"; then
+
+
+ac_cr=`echo X | tr X '\015'`
+# On cygwin, bash can eat \r inside `` if the user requested igncr.
+# But we know of no other shell where ac_cr would be empty at this
+# point, so we can use a bashism as a fallback.
+if test "x$ac_cr" = x; then
+ eval ac_cr=\$\'\\r\'
+fi
+ac_cs_awk_cr=`$AWK 'BEGIN { print "a\rb" }' </dev/null 2>/dev/null`
+if test "$ac_cs_awk_cr" = "a${ac_cr}b"; then
+ ac_cs_awk_cr='\\r'
+else
+ ac_cs_awk_cr=$ac_cr
+fi
+
+echo 'BEGIN {' >"$ac_tmp/subs1.awk" &&
+_ACEOF
+
+
{
- echo "$me: cannot create a temporary directory in ." >&2
- { (exit 1); exit 1; }
+ echo "cat >conf$$subs.awk <<_ACEOF" &&
+ echo "$ac_subst_vars" | sed 's/.*/&!$&$ac_delim/' &&
+ echo "_ACEOF"
+} >conf$$subs.sh ||
+ as_fn_error $? "could not make $CONFIG_STATUS" "$LINENO" 5
+ac_delim_num=`echo "$ac_subst_vars" | grep -c '^'`
+ac_delim='%!_!# '
+for ac_last_try in false false false false false :; do
+ . ./conf$$subs.sh ||
+ as_fn_error $? "could not make $CONFIG_STATUS" "$LINENO" 5
+
+ ac_delim_n=`sed -n "s/.*$ac_delim\$/X/p" conf$$subs.awk | grep -c X`
+ if test $ac_delim_n = $ac_delim_num; then
+ break
+ elif $ac_last_try; then
+ as_fn_error $? "could not make $CONFIG_STATUS" "$LINENO" 5
+ else
+ ac_delim="$ac_delim!$ac_delim _$ac_delim!! "
+ fi
+done
+rm -f conf$$subs.sh
+
+cat >>$CONFIG_STATUS <<_ACEOF || ac_write_fail=1
+cat >>"\$ac_tmp/subs1.awk" <<\\_ACAWK &&
+_ACEOF
+sed -n '
+h
+s/^/S["/; s/!.*/"]=/
+p
+g
+s/^[^!]*!//
+:repl
+t repl
+s/'"$ac_delim"'$//
+t delim
+:nl
+h
+s/\(.\{148\}\)..*/\1/
+t more1
+s/["\\]/\\&/g; s/^/"/; s/$/\\n"\\/
+p
+n
+b repl
+:more1
+s/["\\]/\\&/g; s/^/"/; s/$/"\\/
+p
+g
+s/.\{148\}//
+t nl
+:delim
+h
+s/\(.\{148\}\)..*/\1/
+t more2
+s/["\\]/\\&/g; s/^/"/; s/$/"/
+p
+b
+:more2
+s/["\\]/\\&/g; s/^/"/; s/$/"\\/
+p
+g
+s/.\{148\}//
+t delim
+' <conf$$subs.awk | sed '
+/^[^""]/{
+ N
+ s/\n//
}
+' >>$CONFIG_STATUS || ac_write_fail=1
+rm -f conf$$subs.awk
+cat >>$CONFIG_STATUS <<_ACEOF || ac_write_fail=1
+_ACAWK
+cat >>"\$ac_tmp/subs1.awk" <<_ACAWK &&
+ for (key in S) S_is_set[key] = 1
+ FS = ""
-_ACEOF
+}
+{
+ line = $ 0
+ nfields = split(line, field, "@")
+ substed = 0
+ len = length(field[1])
+ for (i = 2; i < nfields; i++) {
+ key = field[i]
+ keylen = length(key)
+ if (S_is_set[key]) {
+ value = S[key]
+ line = substr(line, 1, len) "" value "" substr(line, len + keylen + 3)
+ len += length(value) + length(field[++i])
+ substed = 1
+ } else
+ len += 1 + keylen
+ }
-cat >>$CONFIG_STATUS <<_ACEOF
+ print line
+}
-#
-# CONFIG_FILES section.
-#
+_ACAWK
+_ACEOF
+cat >>$CONFIG_STATUS <<\_ACEOF || ac_write_fail=1
+if sed "s/$ac_cr//" < /dev/null > /dev/null 2>&1; then
+ sed "s/$ac_cr\$//; s/$ac_cr/$ac_cs_awk_cr/g"
+else
+ cat
+fi < "$ac_tmp/subs1.awk" > "$ac_tmp/subs.awk" \
+ || as_fn_error $? "could not setup config files machinery" "$LINENO" 5
+_ACEOF
+
+# VPATH may cause trouble with some makes, so we remove sole $(srcdir),
+# ${srcdir} and @srcdir@ entries from VPATH if srcdir is ".", strip leading and
+# trailing colons and then remove the whole line if VPATH becomes empty
+# (actually we leave an empty line to preserve line numbers).
+if test "x$srcdir" = x.; then
+ ac_vpsub='/^[ ]*VPATH[ ]*=[ ]*/{
+h
+s///
+s/^/:/
+s/[ ]*$/:/
+s/:\$(srcdir):/:/g
+s/:\${srcdir}:/:/g
+s/:@srcdir@:/:/g
+s/^:*//
+s/:*$//
+x
+s/\(=[ ]*\).*/\1/
+G
+s/\n//
+s/^[^=]*=[ ]*$//
+}'
+fi
-# No need to generate the scripts if there are no CONFIG_FILES.
-# This happens for instance when ./config.status config.h
-if test -n "\$CONFIG_FILES"; then
- # Protect against being on the right side of a sed subst in config.status.
- sed 's/,@/@@/; s/@,/@@/; s/,;t t\$/@;t t/; /@;t t\$/s/[\\\\&,]/\\\\&/g;
- s/@@/,@/; s/@@/@,/; s/@;t t\$/,;t t/' >\$tmp/subs.sed <<\\CEOF
-s, at SHELL@,$SHELL,;t t
-s, at PATH_SEPARATOR@,$PATH_SEPARATOR,;t t
-s, at PACKAGE_NAME@,$PACKAGE_NAME,;t t
-s, at PACKAGE_TARNAME@,$PACKAGE_TARNAME,;t t
-s, at PACKAGE_VERSION@,$PACKAGE_VERSION,;t t
-s, at PACKAGE_STRING@,$PACKAGE_STRING,;t t
-s, at PACKAGE_BUGREPORT@,$PACKAGE_BUGREPORT,;t t
-s, at exec_prefix@,$exec_prefix,;t t
-s, at prefix@,$prefix,;t t
-s, at program_transform_name@,$program_transform_name,;t t
-s, at bindir@,$bindir,;t t
-s, at sbindir@,$sbindir,;t t
-s, at libexecdir@,$libexecdir,;t t
-s, at datadir@,$datadir,;t t
-s, at sysconfdir@,$sysconfdir,;t t
-s, at sharedstatedir@,$sharedstatedir,;t t
-s, at localstatedir@,$localstatedir,;t t
-s, at libdir@,$libdir,;t t
-s, at includedir@,$includedir,;t t
-s, at oldincludedir@,$oldincludedir,;t t
-s, at infodir@,$infodir,;t t
-s, at mandir@,$mandir,;t t
-s, at build_alias@,$build_alias,;t t
-s, at host_alias@,$host_alias,;t t
-s, at target_alias@,$target_alias,;t t
-s, at DEFS@,$DEFS,;t t
-s, at ECHO_C@,$ECHO_C,;t t
-s, at ECHO_N@,$ECHO_N,;t t
-s, at ECHO_T@,$ECHO_T,;t t
-s, at LIBS@,$LIBS,;t t
-s, at INSTALL_PROGRAM@,$INSTALL_PROGRAM,;t t
-s, at INSTALL_SCRIPT@,$INSTALL_SCRIPT,;t t
-s, at INSTALL_DATA@,$INSTALL_DATA,;t t
-s, at CYGPATH_W@,$CYGPATH_W,;t t
-s, at PACKAGE@,$PACKAGE,;t t
-s, at VERSION@,$VERSION,;t t
-s, at ACLOCAL@,$ACLOCAL,;t t
-s, at AUTOCONF@,$AUTOCONF,;t t
-s, at AUTOMAKE@,$AUTOMAKE,;t t
-s, at AUTOHEADER@,$AUTOHEADER,;t t
-s, at MAKEINFO@,$MAKEINFO,;t t
-s, at install_sh@,$install_sh,;t t
-s, at STRIP@,$STRIP,;t t
-s, at ac_ct_STRIP@,$ac_ct_STRIP,;t t
-s, at INSTALL_STRIP_PROGRAM@,$INSTALL_STRIP_PROGRAM,;t t
-s, at mkdir_p@,$mkdir_p,;t t
-s, at AWK@,$AWK,;t t
-s, at SET_MAKE@,$SET_MAKE,;t t
-s, at am__leading_dot@,$am__leading_dot,;t t
-s, at AMTAR@,$AMTAR,;t t
-s, at am__tar@,$am__tar,;t t
-s, at am__untar@,$am__untar,;t t
-s, at PYTHON@,$PYTHON,;t t
-s, at CXX@,$CXX,;t t
-s, at CXXFLAGS@,$CXXFLAGS,;t t
-s, at LDFLAGS@,$LDFLAGS,;t t
-s, at CPPFLAGS@,$CPPFLAGS,;t t
-s, at ac_ct_CXX@,$ac_ct_CXX,;t t
-s, at EXEEXT@,$EXEEXT,;t t
-s, at OBJEXT@,$OBJEXT,;t t
-s, at DEPDIR@,$DEPDIR,;t t
-s, at am__include@,$am__include,;t t
-s, at am__quote@,$am__quote,;t t
-s, at AMDEP_TRUE@,$AMDEP_TRUE,;t t
-s, at AMDEP_FALSE@,$AMDEP_FALSE,;t t
-s, at AMDEPBACKSLASH@,$AMDEPBACKSLASH,;t t
-s, at CXXDEPMODE@,$CXXDEPMODE,;t t
-s, at am__fastdepCXX_TRUE@,$am__fastdepCXX_TRUE,;t t
-s, at am__fastdepCXX_FALSE@,$am__fastdepCXX_FALSE,;t t
-s, at CC@,$CC,;t t
-s, at CFLAGS@,$CFLAGS,;t t
-s, at ac_ct_CC@,$ac_ct_CC,;t t
-s, at CCDEPMODE@,$CCDEPMODE,;t t
-s, at am__fastdepCC_TRUE@,$am__fastdepCC_TRUE,;t t
-s, at am__fastdepCC_FALSE@,$am__fastdepCC_FALSE,;t t
-s, at RANLIB@,$RANLIB,;t t
-s, at ac_ct_RANLIB@,$ac_ct_RANLIB,;t t
-s, at PYTHON_VERSION@,$PYTHON_VERSION,;t t
-s, at PYTHON_PREFIX@,$PYTHON_PREFIX,;t t
-s, at PYTHON_EXEC_PREFIX@,$PYTHON_EXEC_PREFIX,;t t
-s, at PYTHON_PLATFORM@,$PYTHON_PLATFORM,;t t
-s, at pythondir@,$pythondir,;t t
-s, at pkgpythondir@,$pkgpythondir,;t t
-s, at pyexecdir@,$pyexecdir,;t t
-s, at pkgpyexecdir@,$pkgpyexecdir,;t t
-s, at BOOST_CPPFLAGS@,$BOOST_CPPFLAGS,;t t
-s, at BOOST_LDFLAGS@,$BOOST_LDFLAGS,;t t
-s, at BOOST_THREAD_LIBS@,$BOOST_THREAD_LIBS,;t t
-s, at BAM_CPPFLAGS@,$BAM_CPPFLAGS,;t t
-s, at BAM_LDFLAGS@,$BAM_LDFLAGS,;t t
-s, at BAM_LIB@,$BAM_LIB,;t t
-s, at CXXCPP@,$CXXCPP,;t t
-s, at EGREP@,$EGREP,;t t
-s, at LIBOBJS@,$LIBOBJS,;t t
-s, at build@,$build,;t t
-s, at build_cpu@,$build_cpu,;t t
-s, at build_vendor@,$build_vendor,;t t
-s, at build_os@,$build_os,;t t
-s, at host@,$host,;t t
-s, at host_cpu@,$host_cpu,;t t
-s, at host_vendor@,$host_vendor,;t t
-s, at host_os@,$host_os,;t t
-s, at LTLIBOBJS@,$LTLIBOBJS,;t t
-CEOF
+cat >>$CONFIG_STATUS <<\_ACEOF || ac_write_fail=1
+fi # test -n "$CONFIG_FILES"
+# Set up the scripts for CONFIG_HEADERS section.
+# No need to generate them if there are no CONFIG_HEADERS.
+# This happens for instance with `./config.status Makefile'.
+if test -n "$CONFIG_HEADERS"; then
+cat >"$ac_tmp/defines.awk" <<\_ACAWK ||
+BEGIN {
_ACEOF
- cat >>$CONFIG_STATUS <<\_ACEOF
- # Split the substitutions into bite-sized pieces for seds with
- # small command number limits, like on Digital OSF/1 and HP-UX.
- ac_max_sed_lines=48
- ac_sed_frag=1 # Number of current file.
- ac_beg=1 # First line for current file.
- ac_end=$ac_max_sed_lines # Line after last line for current file.
- ac_more_lines=:
- ac_sed_cmds=
- while $ac_more_lines; do
- if test $ac_beg -gt 1; then
- sed "1,${ac_beg}d; ${ac_end}q" $tmp/subs.sed >$tmp/subs.frag
- else
- sed "${ac_end}q" $tmp/subs.sed >$tmp/subs.frag
- fi
- if test ! -s $tmp/subs.frag; then
- ac_more_lines=false
- else
- # The purpose of the label and of the branching condition is to
- # speed up the sed processing (if there are no `@' at all, there
- # is no need to browse any of the substitutions).
- # These are the two extra sed commands mentioned above.
- (echo ':t
- /@[a-zA-Z_][a-zA-Z_0-9]*@/!b' && cat $tmp/subs.frag) >$tmp/subs-$ac_sed_frag.sed
- if test -z "$ac_sed_cmds"; then
- ac_sed_cmds="sed -f $tmp/subs-$ac_sed_frag.sed"
- else
- ac_sed_cmds="$ac_sed_cmds | sed -f $tmp/subs-$ac_sed_frag.sed"
- fi
- ac_sed_frag=`expr $ac_sed_frag + 1`
- ac_beg=$ac_end
- ac_end=`expr $ac_end + $ac_max_sed_lines`
- fi
- done
- if test -z "$ac_sed_cmds"; then
- ac_sed_cmds=cat
+# Transform confdefs.h into an awk script `defines.awk', embedded as
+# here-document in config.status, that substitutes the proper values into
+# config.h.in to produce config.h.
+
+# Create a delimiter string that does not exist in confdefs.h, to ease
+# handling of long lines.
+ac_delim='%!_!# '
+for ac_last_try in false false :; do
+ ac_tt=`sed -n "/$ac_delim/p" confdefs.h`
+ if test -z "$ac_tt"; then
+ break
+ elif $ac_last_try; then
+ as_fn_error $? "could not make $CONFIG_HEADERS" "$LINENO" 5
+ else
+ ac_delim="$ac_delim!$ac_delim _$ac_delim!! "
fi
-fi # test -n "$CONFIG_FILES"
+done
+# For the awk script, D is an array of macro values keyed by name,
+# likewise P contains macro parameters if any. Preserve backslash
+# newline sequences.
+
+ac_word_re=[_$as_cr_Letters][_$as_cr_alnum]*
+sed -n '
+s/.\{148\}/&'"$ac_delim"'/g
+t rset
+:rset
+s/^[ ]*#[ ]*define[ ][ ]*/ /
+t def
+d
+:def
+s/\\$//
+t bsnl
+s/["\\]/\\&/g
+s/^ \('"$ac_word_re"'\)\(([^()]*)\)[ ]*\(.*\)/P["\1"]="\2"\
+D["\1"]=" \3"/p
+s/^ \('"$ac_word_re"'\)[ ]*\(.*\)/D["\1"]=" \2"/p
+d
+:bsnl
+s/["\\]/\\&/g
+s/^ \('"$ac_word_re"'\)\(([^()]*)\)[ ]*\(.*\)/P["\1"]="\2"\
+D["\1"]=" \3\\\\\\n"\\/p
+t cont
+s/^ \('"$ac_word_re"'\)[ ]*\(.*\)/D["\1"]=" \2\\\\\\n"\\/p
+t cont
+d
+:cont
+n
+s/.\{148\}/&'"$ac_delim"'/g
+t clear
+:clear
+s/\\$//
+t bsnlc
+s/["\\]/\\&/g; s/^/"/; s/$/"/p
+d
+:bsnlc
+s/["\\]/\\&/g; s/^/"/; s/$/\\\\\\n"\\/p
+b cont
+' <confdefs.h | sed '
+s/'"$ac_delim"'/"\\\
+"/g' >>$CONFIG_STATUS || ac_write_fail=1
+
+cat >>$CONFIG_STATUS <<_ACEOF || ac_write_fail=1
+ for (key in D) D_is_set[key] = 1
+ FS = ""
+}
+/^[\t ]*#[\t ]*(define|undef)[\t ]+$ac_word_re([\t (]|\$)/ {
+ line = \$ 0
+ split(line, arg, " ")
+ if (arg[1] == "#") {
+ defundef = arg[2]
+ mac1 = arg[3]
+ } else {
+ defundef = substr(arg[1], 2)
+ mac1 = arg[2]
+ }
+ split(mac1, mac2, "(") #)
+ macro = mac2[1]
+ prefix = substr(line, 1, index(line, defundef) - 1)
+ if (D_is_set[macro]) {
+ # Preserve the white space surrounding the "#".
+ print prefix "define", macro P[macro] D[macro]
+ next
+ } else {
+ # Replace #undef with comments. This is necessary, for example,
+ # in the case of _POSIX_SOURCE, which is predefined and required
+ # on some systems where configure will not decide to define it.
+ if (defundef == "undef") {
+ print "/*", prefix defundef, macro, "*/"
+ next
+ }
+ }
+}
+{ print }
+_ACAWK
_ACEOF
-cat >>$CONFIG_STATUS <<\_ACEOF
-for ac_file in : $CONFIG_FILES; do test "x$ac_file" = x: && continue
- # Support "outfile[:infile[:infile...]]", defaulting infile="outfile.in".
- case $ac_file in
- - | *:- | *:-:* ) # input from stdin
- cat >$tmp/stdin
- ac_file_in=`echo "$ac_file" | sed 's,[^:]*:,,'`
- ac_file=`echo "$ac_file" | sed 's,:.*,,'` ;;
- *:* ) ac_file_in=`echo "$ac_file" | sed 's,[^:]*:,,'`
- ac_file=`echo "$ac_file" | sed 's,:.*,,'` ;;
- * ) ac_file_in=$ac_file.in ;;
+cat >>$CONFIG_STATUS <<\_ACEOF || ac_write_fail=1
+ as_fn_error $? "could not setup config headers machinery" "$LINENO" 5
+fi # test -n "$CONFIG_HEADERS"
+
+
+eval set X " :F $CONFIG_FILES :H $CONFIG_HEADERS :C $CONFIG_COMMANDS"
+shift
+for ac_tag
+do
+ case $ac_tag in
+ :[FHLC]) ac_mode=$ac_tag; continue;;
+ esac
+ case $ac_mode$ac_tag in
+ :[FHL]*:*);;
+ :L* | :C*:*) as_fn_error $? "invalid tag \`$ac_tag'" "$LINENO" 5;;
+ :[FH]-) ac_tag=-:-;;
+ :[FH]*) ac_tag=$ac_tag:$ac_tag.in;;
+ esac
+ ac_save_IFS=$IFS
+ IFS=:
+ set x $ac_tag
+ IFS=$ac_save_IFS
+ shift
+ ac_file=$1
+ shift
+
+ case $ac_mode in
+ :L) ac_source=$1;;
+ :[FH])
+ ac_file_inputs=
+ for ac_f
+ do
+ case $ac_f in
+ -) ac_f="$ac_tmp/stdin";;
+ *) # Look for the file first in the build tree, then in the source tree
+ # (if the path is not absolute). The absolute path cannot be DOS-style,
+ # because $ac_f cannot contain `:'.
+ test -f "$ac_f" ||
+ case $ac_f in
+ [\\/$]*) false;;
+ *) test -f "$srcdir/$ac_f" && ac_f="$srcdir/$ac_f";;
+ esac ||
+ as_fn_error 1 "cannot find input file: \`$ac_f'" "$LINENO" 5;;
+ esac
+ case $ac_f in *\'*) ac_f=`$as_echo "$ac_f" | sed "s/'/'\\\\\\\\''/g"`;; esac
+ as_fn_append ac_file_inputs " '$ac_f'"
+ done
+
+ # Let's still pretend it is `configure' which instantiates (i.e., don't
+ # use $as_me), people would be surprised to read:
+ # /* config.h. Generated by config.status. */
+ configure_input='Generated from '`
+ $as_echo "$*" | sed 's|^[^:]*/||;s|:[^:]*/|, |g'
+ `' by configure.'
+ if test x"$ac_file" != x-; then
+ configure_input="$ac_file. $configure_input"
+ { $as_echo "$as_me:${as_lineno-$LINENO}: creating $ac_file" >&5
+$as_echo "$as_me: creating $ac_file" >&6;}
+ fi
+ # Neutralize special characters interpreted by sed in replacement strings.
+ case $configure_input in #(
+ *\&* | *\|* | *\\* )
+ ac_sed_conf_input=`$as_echo "$configure_input" |
+ sed 's/[\\\\&|]/\\\\&/g'`;; #(
+ *) ac_sed_conf_input=$configure_input;;
+ esac
+
+ case $ac_tag in
+ *:-:* | *:-) cat >"$ac_tmp/stdin" \
+ || as_fn_error $? "could not create $ac_file" "$LINENO" 5 ;;
+ esac
+ ;;
esac
- # Compute @srcdir@, @top_srcdir@, and @INSTALL@ for subdirectories.
- ac_dir=`(dirname "$ac_file") 2>/dev/null ||
+ ac_dir=`$as_dirname -- "$ac_file" ||
$as_expr X"$ac_file" : 'X\(.*[^/]\)//*[^/][^/]*/*$' \| \
X"$ac_file" : 'X\(//\)[^/]' \| \
X"$ac_file" : 'X\(//\)$' \| \
- X"$ac_file" : 'X\(/\)' \| \
- . : '\(.\)' 2>/dev/null ||
-echo X"$ac_file" |
- sed '/^X\(.*[^/]\)\/\/*[^/][^/]*\/*$/{ s//\1/; q; }
- /^X\(\/\/\)[^/].*/{ s//\1/; q; }
- /^X\(\/\/\)$/{ s//\1/; q; }
- /^X\(\/\).*/{ s//\1/; q; }
- s/.*/./; q'`
- { if $as_mkdir_p; then
- mkdir -p "$ac_dir"
- else
- as_dir="$ac_dir"
- as_dirs=
- while test ! -d "$as_dir"; do
- as_dirs="$as_dir $as_dirs"
- as_dir=`(dirname "$as_dir") 2>/dev/null ||
-$as_expr X"$as_dir" : 'X\(.*[^/]\)//*[^/][^/]*/*$' \| \
- X"$as_dir" : 'X\(//\)[^/]' \| \
- X"$as_dir" : 'X\(//\)$' \| \
- X"$as_dir" : 'X\(/\)' \| \
- . : '\(.\)' 2>/dev/null ||
-echo X"$as_dir" |
- sed '/^X\(.*[^/]\)\/\/*[^/][^/]*\/*$/{ s//\1/; q; }
- /^X\(\/\/\)[^/].*/{ s//\1/; q; }
- /^X\(\/\/\)$/{ s//\1/; q; }
- /^X\(\/\).*/{ s//\1/; q; }
- s/.*/./; q'`
- done
- test ! -n "$as_dirs" || mkdir $as_dirs
- fi || { { echo "$as_me:$LINENO: error: cannot create directory \"$ac_dir\"" >&5
-echo "$as_me: error: cannot create directory \"$ac_dir\"" >&2;}
- { (exit 1); exit 1; }; }; }
-
+ X"$ac_file" : 'X\(/\)' \| . 2>/dev/null ||
+$as_echo X"$ac_file" |
+ sed '/^X\(.*[^/]\)\/\/*[^/][^/]*\/*$/{
+ s//\1/
+ q
+ }
+ /^X\(\/\/\)[^/].*/{
+ s//\1/
+ q
+ }
+ /^X\(\/\/\)$/{
+ s//\1/
+ q
+ }
+ /^X\(\/\).*/{
+ s//\1/
+ q
+ }
+ s/.*/./; q'`
+ as_dir="$ac_dir"; as_fn_mkdir_p
ac_builddir=.
-if test "$ac_dir" != .; then
- ac_dir_suffix=/`echo "$ac_dir" | sed 's,^\.[\\/],,'`
- # A "../" for each directory in $ac_dir_suffix.
- ac_top_builddir=`echo "$ac_dir_suffix" | sed 's,/[^\\/]*,../,g'`
-else
- ac_dir_suffix= ac_top_builddir=
-fi
+case "$ac_dir" in
+.) ac_dir_suffix= ac_top_builddir_sub=. ac_top_build_prefix= ;;
+*)
+ ac_dir_suffix=/`$as_echo "$ac_dir" | sed 's|^\.[\\/]||'`
+ # A ".." for each directory in $ac_dir_suffix.
+ ac_top_builddir_sub=`$as_echo "$ac_dir_suffix" | sed 's|/[^\\/]*|/..|g;s|/||'`
+ case $ac_top_builddir_sub in
+ "") ac_top_builddir_sub=. ac_top_build_prefix= ;;
+ *) ac_top_build_prefix=$ac_top_builddir_sub/ ;;
+ esac ;;
+esac
+ac_abs_top_builddir=$ac_pwd
+ac_abs_builddir=$ac_pwd$ac_dir_suffix
+# for backward compatibility:
+ac_top_builddir=$ac_top_build_prefix
case $srcdir in
- .) # No --srcdir option. We are building in place.
+ .) # We are building in place.
ac_srcdir=.
- if test -z "$ac_top_builddir"; then
- ac_top_srcdir=.
- else
- ac_top_srcdir=`echo $ac_top_builddir | sed 's,/$,,'`
- fi ;;
- [\\/]* | ?:[\\/]* ) # Absolute path.
+ ac_top_srcdir=$ac_top_builddir_sub
+ ac_abs_top_srcdir=$ac_pwd ;;
+ [\\/]* | ?:[\\/]* ) # Absolute name.
ac_srcdir=$srcdir$ac_dir_suffix;
- ac_top_srcdir=$srcdir ;;
- *) # Relative path.
- ac_srcdir=$ac_top_builddir$srcdir$ac_dir_suffix
- ac_top_srcdir=$ac_top_builddir$srcdir ;;
+ ac_top_srcdir=$srcdir
+ ac_abs_top_srcdir=$srcdir ;;
+ *) # Relative name.
+ ac_srcdir=$ac_top_build_prefix$srcdir$ac_dir_suffix
+ ac_top_srcdir=$ac_top_build_prefix$srcdir
+ ac_abs_top_srcdir=$ac_pwd/$srcdir ;;
esac
+ac_abs_srcdir=$ac_abs_top_srcdir$ac_dir_suffix
-# Do not use `cd foo && pwd` to compute absolute paths, because
-# the directories may not exist.
-case `pwd` in
-.) ac_abs_builddir="$ac_dir";;
-*)
- case "$ac_dir" in
- .) ac_abs_builddir=`pwd`;;
- [\\/]* | ?:[\\/]* ) ac_abs_builddir="$ac_dir";;
- *) ac_abs_builddir=`pwd`/"$ac_dir";;
- esac;;
-esac
-case $ac_abs_builddir in
-.) ac_abs_top_builddir=${ac_top_builddir}.;;
-*)
- case ${ac_top_builddir}. in
- .) ac_abs_top_builddir=$ac_abs_builddir;;
- [\\/]* | ?:[\\/]* ) ac_abs_top_builddir=${ac_top_builddir}.;;
- *) ac_abs_top_builddir=$ac_abs_builddir/${ac_top_builddir}.;;
- esac;;
-esac
-case $ac_abs_builddir in
-.) ac_abs_srcdir=$ac_srcdir;;
-*)
- case $ac_srcdir in
- .) ac_abs_srcdir=$ac_abs_builddir;;
- [\\/]* | ?:[\\/]* ) ac_abs_srcdir=$ac_srcdir;;
- *) ac_abs_srcdir=$ac_abs_builddir/$ac_srcdir;;
- esac;;
-esac
-case $ac_abs_builddir in
-.) ac_abs_top_srcdir=$ac_top_srcdir;;
-*)
- case $ac_top_srcdir in
- .) ac_abs_top_srcdir=$ac_abs_builddir;;
- [\\/]* | ?:[\\/]* ) ac_abs_top_srcdir=$ac_top_srcdir;;
- *) ac_abs_top_srcdir=$ac_abs_builddir/$ac_top_srcdir;;
- esac;;
-esac
+ case $ac_mode in
+ :F)
+ #
+ # CONFIG_FILE
+ #
case $INSTALL in
[\\/$]* | ?:[\\/]* ) ac_INSTALL=$INSTALL ;;
- *) ac_INSTALL=$ac_top_builddir$INSTALL ;;
+ *) ac_INSTALL=$ac_top_build_prefix$INSTALL ;;
+ esac
+ ac_MKDIR_P=$MKDIR_P
+ case $MKDIR_P in
+ [\\/$]* | ?:[\\/]* ) ;;
+ */*) ac_MKDIR_P=$ac_top_build_prefix$MKDIR_P ;;
esac
+_ACEOF
- if test x"$ac_file" != x-; then
- { echo "$as_me:$LINENO: creating $ac_file" >&5
-echo "$as_me: creating $ac_file" >&6;}
- rm -f "$ac_file"
- fi
- # Let's still pretend it is `configure' which instantiates (i.e., don't
- # use $as_me), people would be surprised to read:
- # /* config.h. Generated by config.status. */
- if test x"$ac_file" = x-; then
- configure_input=
- else
- configure_input="$ac_file. "
- fi
- configure_input=$configure_input"Generated from `echo $ac_file_in |
- sed 's,.*/,,'` by configure."
-
- # First look for the input files in the build tree, otherwise in the
- # src tree.
- ac_file_inputs=`IFS=:
- for f in $ac_file_in; do
- case $f in
- -) echo $tmp/stdin ;;
- [\\/$]*)
- # Absolute (can't be DOS-style, as IFS=:)
- test -f "$f" || { { echo "$as_me:$LINENO: error: cannot find input file: $f" >&5
-echo "$as_me: error: cannot find input file: $f" >&2;}
- { (exit 1); exit 1; }; }
- echo "$f";;
- *) # Relative
- if test -f "$f"; then
- # Build tree
- echo "$f"
- elif test -f "$srcdir/$f"; then
- # Source tree
- echo "$srcdir/$f"
- else
- # /dev/null tree
- { { echo "$as_me:$LINENO: error: cannot find input file: $f" >&5
-echo "$as_me: error: cannot find input file: $f" >&2;}
- { (exit 1); exit 1; }; }
- fi;;
- esac
- done` || { (exit 1); exit 1; }
+cat >>$CONFIG_STATUS <<\_ACEOF || ac_write_fail=1
+# If the template does not know about datarootdir, expand it.
+# FIXME: This hack should be removed a few years after 2.60.
+ac_datarootdir_hack=; ac_datarootdir_seen=
+ac_sed_dataroot='
+/datarootdir/ {
+ p
+ q
+}
+/@datadir@/p
+/@docdir@/p
+/@infodir@/p
+/@localedir@/p
+/@mandir@/p'
+case `eval "sed -n \"\$ac_sed_dataroot\" $ac_file_inputs"` in
+*datarootdir*) ac_datarootdir_seen=yes;;
+*@datadir@*|*@docdir@*|*@infodir@*|*@localedir@*|*@mandir@*)
+ { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: $ac_file_inputs seems to ignore the --datarootdir setting" >&5
+$as_echo "$as_me: WARNING: $ac_file_inputs seems to ignore the --datarootdir setting" >&2;}
+_ACEOF
+cat >>$CONFIG_STATUS <<_ACEOF || ac_write_fail=1
+ ac_datarootdir_hack='
+ s&@datadir@&$datadir&g
+ s&@docdir@&$docdir&g
+ s&@infodir@&$infodir&g
+ s&@localedir@&$localedir&g
+ s&@mandir@&$mandir&g
+ s&\\\${datarootdir}&$datarootdir&g' ;;
+esac
_ACEOF
-cat >>$CONFIG_STATUS <<_ACEOF
- sed "$ac_vpsub
+
+# Neutralize VPATH when `$srcdir' = `.'.
+# Shell code in configure.ac might set extrasub.
+# FIXME: do we really want to maintain this feature?
+cat >>$CONFIG_STATUS <<_ACEOF || ac_write_fail=1
+ac_sed_extra="$ac_vpsub
$extrasub
_ACEOF
-cat >>$CONFIG_STATUS <<\_ACEOF
+cat >>$CONFIG_STATUS <<\_ACEOF || ac_write_fail=1
:t
/@[a-zA-Z_][a-zA-Z_0-9]*@/!b
-s, at configure_input@,$configure_input,;t t
-s, at srcdir@,$ac_srcdir,;t t
-s, at abs_srcdir@,$ac_abs_srcdir,;t t
-s, at top_srcdir@,$ac_top_srcdir,;t t
-s, at abs_top_srcdir@,$ac_abs_top_srcdir,;t t
-s, at builddir@,$ac_builddir,;t t
-s, at abs_builddir@,$ac_abs_builddir,;t t
-s, at top_builddir@,$ac_top_builddir,;t t
-s, at abs_top_builddir@,$ac_abs_top_builddir,;t t
-s, at INSTALL@,$ac_INSTALL,;t t
-" $ac_file_inputs | (eval "$ac_sed_cmds") >$tmp/out
- rm -f $tmp/stdin
- if test x"$ac_file" != x-; then
- mv $tmp/out $ac_file
- else
- cat $tmp/out
- rm -f $tmp/out
- fi
-
-done
-_ACEOF
-cat >>$CONFIG_STATUS <<\_ACEOF
-
-#
-# CONFIG_HEADER section.
-#
-
-# These sed commands are passed to sed as "A NAME B NAME C VALUE D", where
-# NAME is the cpp macro being defined and VALUE is the value it is being given.
-#
-# ac_d sets the value in "#define NAME VALUE" lines.
-ac_dA='s,^\([ ]*\)#\([ ]*define[ ][ ]*\)'
-ac_dB='[ ].*$,\1#\2'
-ac_dC=' '
-ac_dD=',;t'
-# ac_u turns "#undef NAME" without trailing blanks into "#define NAME VALUE".
-ac_uA='s,^\([ ]*\)#\([ ]*\)undef\([ ][ ]*\)'
-ac_uB='$,\1#\2define\3'
-ac_uC=' '
-ac_uD=',;t'
-
-for ac_file in : $CONFIG_HEADERS; do test "x$ac_file" = x: && continue
- # Support "outfile[:infile[:infile...]]", defaulting infile="outfile.in".
+s|@configure_input@|$ac_sed_conf_input|;t t
+s&@top_builddir@&$ac_top_builddir_sub&;t t
+s&@top_build_prefix@&$ac_top_build_prefix&;t t
+s&@srcdir@&$ac_srcdir&;t t
+s&@abs_srcdir@&$ac_abs_srcdir&;t t
+s&@top_srcdir@&$ac_top_srcdir&;t t
+s&@abs_top_srcdir@&$ac_abs_top_srcdir&;t t
+s&@builddir@&$ac_builddir&;t t
+s&@abs_builddir@&$ac_abs_builddir&;t t
+s&@abs_top_builddir@&$ac_abs_top_builddir&;t t
+s&@INSTALL@&$ac_INSTALL&;t t
+s&@MKDIR_P@&$ac_MKDIR_P&;t t
+$ac_datarootdir_hack
+"
+eval sed \"\$ac_sed_extra\" "$ac_file_inputs" | $AWK -f "$ac_tmp/subs.awk" \
+ >$ac_tmp/out || as_fn_error $? "could not create $ac_file" "$LINENO" 5
+
+test -z "$ac_datarootdir_hack$ac_datarootdir_seen" &&
+ { ac_out=`sed -n '/\${datarootdir}/p' "$ac_tmp/out"`; test -n "$ac_out"; } &&
+ { ac_out=`sed -n '/^[ ]*datarootdir[ ]*:*=/p' \
+ "$ac_tmp/out"`; test -z "$ac_out"; } &&
+ { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: $ac_file contains a reference to the variable \`datarootdir'
+which seems to be undefined. Please make sure it is defined" >&5
+$as_echo "$as_me: WARNING: $ac_file contains a reference to the variable \`datarootdir'
+which seems to be undefined. Please make sure it is defined" >&2;}
+
+ rm -f "$ac_tmp/stdin"
case $ac_file in
- - | *:- | *:-:* ) # input from stdin
- cat >$tmp/stdin
- ac_file_in=`echo "$ac_file" | sed 's,[^:]*:,,'`
- ac_file=`echo "$ac_file" | sed 's,:.*,,'` ;;
- *:* ) ac_file_in=`echo "$ac_file" | sed 's,[^:]*:,,'`
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-echo X"$as_dir" |
- sed '/^X\(.*[^/]\)\/\/*[^/][^/]*\/*$/{ s//\1/; q; }
- /^X\(\/\/\)[^/].*/{ s//\1/; q; }
- /^X\(\/\/\)$/{ s//\1/; q; }
- /^X\(\/\).*/{ s//\1/; q; }
- s/.*/./; q'`
+ X"$file" : 'X\(/\)' \| . 2>/dev/null ||
+$as_echo X"$file" |
+ sed '/^X\(.*[^/]\)\/\/*[^/][^/]*\/*$/{
+ s//\1/
+ q
+ }
+ /^X\(\/\/\)[^/].*/{
+ s//\1/
+ q
+ }
+ /^X\(\/\/\)$/{
+ s//\1/
+ q
+ }
+ /^X\(\/\).*/{
+ s//\1/
+ q
+ }
+ s/.*/./; q'`
+ as_dir=$dirpart/$fdir; as_fn_mkdir_p
+ # echo "creating $dirpart/$file"
+ echo '# dummy' > "$dirpart/$file"
done
- test ! -n "$as_dirs" || mkdir $as_dirs
- fi || { { echo "$as_me:$LINENO: error: cannot create directory $dirpart/$fdir" >&5
-echo "$as_me: error: cannot create directory $dirpart/$fdir" >&2;}
- { (exit 1); exit 1; }; }; }
-
- # echo "creating $dirpart/$file"
- echo '# dummy' > "$dirpart/$file"
done
-done
+}
;;
+
esac
-done
-_ACEOF
+done # for ac_tag
-cat >>$CONFIG_STATUS <<\_ACEOF
-{ (exit 0); exit 0; }
+as_fn_exit 0
_ACEOF
-chmod +x $CONFIG_STATUS
ac_clean_files=$ac_clean_files_save
+test $ac_write_fail = 0 ||
+ as_fn_error $? "write failure creating $CONFIG_STATUS" "$LINENO" 5
+
# configure is writing to config.log, and then calls config.status.
# config.status does its own redirection, appending to config.log.
@@ -9114,7 +8786,11 @@ if test "$no_create" != yes; then
exec 5>>config.log
# Use ||, not &&, to avoid exiting from the if with $? = 1, which
# would make configure fail if this is the last instruction.
- $ac_cs_success || { (exit 1); exit 1; }
+ $ac_cs_success || as_fn_exit 1
+fi
+if test -n "$ac_unrecognized_opts" && test "$enable_option_checking" != no; then
+ { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: unrecognized options: $ac_unrecognized_opts" >&5
+$as_echo "$as_me: WARNING: unrecognized options: $ac_unrecognized_opts" >&2;}
fi
@@ -9139,7 +8815,7 @@ echo \
Install eprefix: ${exec_prefix}
See config.h for further configuration information.
- Email <${PACKAGE_BUGREPORT}> with questions and bug reports.
+ Email bug reports to <${PACKAGE_BUGREPORT}>.
"
if test x"${PYTHON}" = x":" || ! test -x "${PYTHON}"; then
diff --git a/configure.ac b/configure.ac
index 9b0d898..d61ff2d 100644
--- a/configure.ac
+++ b/configure.ac
@@ -1,5 +1,5 @@
define([svnversion], esyscmd([sh -c "svnversion|tr -d '\n'"]))dnl
-AC_INIT([tophat],[2.0.13],[tophat.cufflinks at gmail.com])
+AC_INIT([tophat],[2.0.14],[tophat.cufflinks at gmail.com])
AC_DEFINE(SVN_REVISION, "svnversion", [SVN Revision])
AC_CONFIG_SRCDIR([config.h.in])
@@ -38,8 +38,6 @@ if test -z "$BOOST_THREAD_LIBS"; then
fi
-
-
# BAM related:
ac_bam_path=samtools-0.1.18
BAM_LIB="-lbam"
@@ -107,8 +105,8 @@ AS_IF([test "x$enable_debug" = xyes],
CFLAGS="${generic_CFLAGS} ${ext_CFLAGS} ${user_CFLAGS} ${debug_CFLAGS}"
CXXFLAGS="$CFLAGS"
-CXXFLAGS="$CXXFLAGS $BOOST_CPPFLAGS $BAM_CPPFLAGS -I./SeqAn-1.3"
-LDFLAGS="$BOOST_LDFLAGS $BAM_LDFLAGS $user_LDFLAGS"
+CXXFLAGS="$CXXFLAGS $BAM_CPPFLAGS $BOOST_CPPFLAGS -I./SeqAn-1.3"
+LDFLAGS="$BAM_LDFLAGS $BOOST_LDFLAGS $user_LDFLAGS"
AM_INIT_AUTOMAKE([-Wall foreign tar-pax foreign])
@@ -139,7 +137,7 @@ echo \
Install eprefix: ${exec_prefix}
See config.h for further configuration information.
- Email <${PACKAGE_BUGREPORT}> with questions and bug reports.
+ Email bug reports to <${PACKAGE_BUGREPORT}>.
"
if test x"${PYTHON}" = x":" || ! test -x "${PYTHON}"; then
diff --git a/src/Makefile.am b/src/Makefile.am
index fadec38..54db7c6 100644
--- a/src/Makefile.am
+++ b/src/Makefile.am
@@ -720,51 +720,51 @@ libgc_a_SOURCES = \
prep_reads_SOURCES = prep_reads.cpp
prep_reads_LDADD = $(top_builddir)/src/libtophat.a $(BAM_LIB)
-prep_reads_LDFLAGS = $(LDFLAGS) $(BAM_LDFLAGS)
+prep_reads_LDFLAGS = $(BAM_LDFLAGS) $(LDFLAGS)
segment_juncs_SOURCES = segment_juncs.cpp
segment_juncs_LDADD = $(top_builddir)/src/libtophat.a $(BOOST_THREAD_LIBS) $(BOOST_SYSTEM_LIB) $(BAM_LIB)
-segment_juncs_LDFLAGS = $(LDFLAGS) $(BOOST_LDFLAGS) $(BAM_LDFLAGS)
+segment_juncs_LDFLAGS = $(BAM_LDFLAGS) $(LDFLAGS) $(BOOST_LDFLAGS)
long_spanning_reads_SOURCES = long_spanning_reads.cpp
long_spanning_reads_LDADD = $(top_builddir)/src/libtophat.a $(BOOST_THREAD_LIBS) $(BOOST_SYSTEM_LIB) $(BAM_LIB)
-long_spanning_reads_LDFLAGS = $(LDFLAGS) $(BOOST_LDFLAGS) $(BAM_LDFLAGS)
+long_spanning_reads_LDFLAGS = $(BAM_LDFLAGS) $(LDFLAGS) $(BOOST_LDFLAGS)
gtf_juncs_SOURCES = gtf_juncs.cpp
gtf_juncs_LDADD = $(top_builddir)/src/libtophat.a libgc.a $(BAM_LIB)
-gtf_juncs_LDFLAGS = $(LDFLAGS) $(BAM_LDFLAGS)
+gtf_juncs_LDFLAGS = $(BAM_LDFLAGS) $(LDFLAGS)
juncs_db_SOURCES = juncs_db.cpp
juncs_db_LDADD = $(top_builddir)/src/libtophat.a $(BAM_LIB)
-juncs_db_LDFLAGS = $(LDFLAGS) $(BAM_LDFLAGS)
+juncs_db_LDFLAGS = $(BAM_LDFLAGS) $(LDFLAGS)
tophat_reports_SOURCES = tophat_reports.cpp
tophat_reports_LDADD = $(top_builddir)/src/libtophat.a $(BOOST_THREAD_LIBS) $(BOOST_SYSTEM_LIB) $(BAM_LIB)
-tophat_reports_LDFLAGS = $(LDFLAGS) $(BOOST_LDFLAGS) $(BAM_LDFLAGS)
+tophat_reports_LDFLAGS = $(BAM_LDFLAGS) $(LDFLAGS) $(BOOST_LDFLAGS)
fix_map_ordering_SOURCES = fix_map_ordering.cpp
fix_map_ordering_LDADD = $(top_builddir)/src/libtophat.a $(BAM_LIB)
-fix_map_ordering_LDFLAGS = $(LDFLAGS) $(BAM_LDFLAGS)
+fix_map_ordering_LDFLAGS = $(BAM_LDFLAGS) $(LDFLAGS)
bam2fastx_SOURCES = bam2fastx.cpp
bam2fastx_LDADD = $(top_builddir)/src/libgc.a $(BAM_LIB)
-bam2fastx_LDFLAGS = $(LDFLAGS) $(BAM_LDFLAGS)
+bam2fastx_LDFLAGS = $(BAM_LDFLAGS) $(LDFLAGS)
bam_merge_SOURCES = bam_merge.cpp
bam_merge_LDADD = $(top_builddir)/src/libtophat.a $(top_builddir)/src/libgc.a $(BAM_LIB)
-bam_merge_LDFLAGS = $(LDFLAGS) $(BAM_LDFLAGS)
+bam_merge_LDFLAGS = $(BAM_LDFLAGS) $(LDFLAGS)
sam_juncs_SOURCES = sam_juncs.cpp
sam_juncs_LDADD = $(top_builddir)/src/libtophat.a $(BAM_LIB)
-sam_juncs_LDFLAGS = $(LDFLAGS) $(BAM_LDFLAGS)
+sam_juncs_LDFLAGS = $(BAM_LDFLAGS) $(LDFLAGS)
map2gtf_SOURCES = map2gtf.cpp
map2gtf_LDADD = $(top_builddir)/src/libtophat.a libgc.a $(BAM_LIB)
-map2gtf_LDFLAGS = $(LDFLAGS) $(BAM_LDFLAGS)
+map2gtf_LDFLAGS = $(BAM_LDFLAGS) $(LDFLAGS)
gtf_to_fasta_SOURCES = GTFToFasta.cpp FastaTools.cpp
gtf_to_fasta_LDADD = $(top_builddir)/src/libtophat.a libgc.a $(BAM_LIB)
-gtf_to_fasta_LDFLAGS = $(LDFLAGS) $(BAM_LDFLAGS)
+gtf_to_fasta_LDFLAGS = $(BAM_LDFLAGS) $(LDFLAGS)
libbam_a_SOURCES =
diff --git a/src/Makefile.in b/src/Makefile.in
index 6c8009f..fcf9d17 100644
--- a/src/Makefile.in
+++ b/src/Makefile.in
@@ -1,8 +1,8 @@
-# Makefile.in generated by automake 1.9.6 from Makefile.am.
+# Makefile.in generated by automake 1.12.6 from Makefile.am.
# @configure_input@
-# Copyright (C) 1994, 1995, 1996, 1997, 1998, 1999, 2000, 2001, 2002,
-# 2003, 2004, 2005 Free Software Foundation, Inc.
+# Copyright (C) 1994-2012 Free Software Foundation, Inc.
+
# This Makefile.in is free software; the Free Software Foundation
# gives unlimited permission to copy and/or distribute it,
# with or without modifications, as long as this notice is preserved.
@@ -19,15 +19,29 @@
-srcdir = @srcdir@
-top_srcdir = @top_srcdir@
VPATH = @srcdir@
+am__make_dryrun = \
+ { \
+ am__dry=no; \
+ case $$MAKEFLAGS in \
+ *\\[\ \ ]*) \
+ echo 'am--echo: ; @echo "AM" OK' | $(MAKE) -f - 2>/dev/null \
+ | grep '^AM OK$$' >/dev/null || am__dry=yes;; \
+ *) \
+ for am__flg in $$MAKEFLAGS; do \
+ case $$am__flg in \
+ *=*|--*) ;; \
+ *n*) am__dry=yes; break;; \
+ esac; \
+ done;; \
+ esac; \
+ test $$am__dry = yes; \
+ }
pkgdatadir = $(datadir)/@PACKAGE@
-pkglibdir = $(libdir)/@PACKAGE@
pkgincludedir = $(includedir)/@PACKAGE@
-top_builddir = ..
+pkglibdir = $(libdir)/@PACKAGE@
+pkglibexecdir = $(libexecdir)/@PACKAGE@
am__cd = CDPATH="$${ZSH_VERSION+.}$(PATH_SEPARATOR)" && cd
-INSTALL = @INSTALL@
install_sh_DATA = $(install_sh) -c -m 644
install_sh_PROGRAM = $(install_sh) -c
install_sh_SCRIPT = $(install_sh) -c
@@ -49,7 +63,8 @@ bin_PROGRAMS = $(am__EXEEXT_1) prep_reads$(EXEEXT) \
sam_juncs$(EXEEXT)
subdir = src
DIST_COMMON = $(dist_bin_SCRIPTS) $(noinst_HEADERS) \
- $(srcdir)/Makefile.am $(srcdir)/Makefile.in
+ $(srcdir)/Makefile.am $(srcdir)/Makefile.in \
+ $(top_srcdir)/depcomp
ACLOCAL_M4 = $(top_srcdir)/aclocal.m4
am__aclocal_m4_deps = $(top_srcdir)/ax_boost_base.m4 \
$(top_srcdir)/ax_boost_thread.m4 $(top_srcdir)/configure.ac
@@ -58,8 +73,8 @@ am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
mkinstalldirs = $(install_sh) -d
CONFIG_HEADER = $(top_builddir)/config.h
CONFIG_CLEAN_FILES =
+CONFIG_CLEAN_VPATH_FILES =
LIBRARIES = $(noinst_LIBRARIES)
-AR = ar
ARFLAGS = cru
libbam_a_AR = $(AR) $(ARFLAGS)
libbam_a_LIBADD =
@@ -82,49 +97,68 @@ libtophat_a_OBJECTS = $(am_libtophat_a_OBJECTS)
am__EXEEXT_1 = samtools_0.1.18$(EXEEXT)
am__installdirs = "$(DESTDIR)$(bindir)" "$(DESTDIR)$(bindir)" \
"$(DESTDIR)$(bindir)"
-binPROGRAMS_INSTALL = $(INSTALL_PROGRAM)
PROGRAMS = $(bin_PROGRAMS)
am_bam2fastx_OBJECTS = bam2fastx.$(OBJEXT)
bam2fastx_OBJECTS = $(am_bam2fastx_OBJECTS)
am__DEPENDENCIES_1 =
bam2fastx_DEPENDENCIES = $(top_builddir)/src/libgc.a \
$(am__DEPENDENCIES_1)
+bam2fastx_LINK = $(CXXLD) $(AM_CXXFLAGS) $(CXXFLAGS) \
+ $(bam2fastx_LDFLAGS) $(LDFLAGS) -o $@
am_bam_merge_OBJECTS = bam_merge.$(OBJEXT)
bam_merge_OBJECTS = $(am_bam_merge_OBJECTS)
bam_merge_DEPENDENCIES = $(top_builddir)/src/libtophat.a \
$(top_builddir)/src/libgc.a $(am__DEPENDENCIES_1)
+bam_merge_LINK = $(CXXLD) $(AM_CXXFLAGS) $(CXXFLAGS) \
+ $(bam_merge_LDFLAGS) $(LDFLAGS) -o $@
am_fix_map_ordering_OBJECTS = fix_map_ordering.$(OBJEXT)
fix_map_ordering_OBJECTS = $(am_fix_map_ordering_OBJECTS)
fix_map_ordering_DEPENDENCIES = $(top_builddir)/src/libtophat.a \
$(am__DEPENDENCIES_1)
+fix_map_ordering_LINK = $(CXXLD) $(AM_CXXFLAGS) $(CXXFLAGS) \
+ $(fix_map_ordering_LDFLAGS) $(LDFLAGS) -o $@
am_gtf_juncs_OBJECTS = gtf_juncs.$(OBJEXT)
gtf_juncs_OBJECTS = $(am_gtf_juncs_OBJECTS)
gtf_juncs_DEPENDENCIES = $(top_builddir)/src/libtophat.a libgc.a \
$(am__DEPENDENCIES_1)
+gtf_juncs_LINK = $(CXXLD) $(AM_CXXFLAGS) $(CXXFLAGS) \
+ $(gtf_juncs_LDFLAGS) $(LDFLAGS) -o $@
am_gtf_to_fasta_OBJECTS = GTFToFasta.$(OBJEXT) FastaTools.$(OBJEXT)
gtf_to_fasta_OBJECTS = $(am_gtf_to_fasta_OBJECTS)
gtf_to_fasta_DEPENDENCIES = $(top_builddir)/src/libtophat.a libgc.a \
$(am__DEPENDENCIES_1)
+gtf_to_fasta_LINK = $(CXXLD) $(AM_CXXFLAGS) $(CXXFLAGS) \
+ $(gtf_to_fasta_LDFLAGS) $(LDFLAGS) -o $@
am_juncs_db_OBJECTS = juncs_db.$(OBJEXT)
juncs_db_OBJECTS = $(am_juncs_db_OBJECTS)
juncs_db_DEPENDENCIES = $(top_builddir)/src/libtophat.a \
$(am__DEPENDENCIES_1)
+juncs_db_LINK = $(CXXLD) $(AM_CXXFLAGS) $(CXXFLAGS) \
+ $(juncs_db_LDFLAGS) $(LDFLAGS) -o $@
am_long_spanning_reads_OBJECTS = long_spanning_reads.$(OBJEXT)
long_spanning_reads_OBJECTS = $(am_long_spanning_reads_OBJECTS)
long_spanning_reads_DEPENDENCIES = $(top_builddir)/src/libtophat.a \
$(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+long_spanning_reads_LINK = $(CXXLD) $(AM_CXXFLAGS) $(CXXFLAGS) \
+ $(long_spanning_reads_LDFLAGS) $(LDFLAGS) -o $@
am_map2gtf_OBJECTS = map2gtf.$(OBJEXT)
map2gtf_OBJECTS = $(am_map2gtf_OBJECTS)
map2gtf_DEPENDENCIES = $(top_builddir)/src/libtophat.a libgc.a \
$(am__DEPENDENCIES_1)
+map2gtf_LINK = $(CXXLD) $(AM_CXXFLAGS) $(CXXFLAGS) $(map2gtf_LDFLAGS) \
+ $(LDFLAGS) -o $@
am_prep_reads_OBJECTS = prep_reads.$(OBJEXT)
prep_reads_OBJECTS = $(am_prep_reads_OBJECTS)
prep_reads_DEPENDENCIES = $(top_builddir)/src/libtophat.a \
$(am__DEPENDENCIES_1)
+prep_reads_LINK = $(CXXLD) $(AM_CXXFLAGS) $(CXXFLAGS) \
+ $(prep_reads_LDFLAGS) $(LDFLAGS) -o $@
am_sam_juncs_OBJECTS = sam_juncs.$(OBJEXT)
sam_juncs_OBJECTS = $(am_sam_juncs_OBJECTS)
sam_juncs_DEPENDENCIES = $(top_builddir)/src/libtophat.a \
$(am__DEPENDENCIES_1)
+sam_juncs_LINK = $(CXXLD) $(AM_CXXFLAGS) $(CXXFLAGS) \
+ $(sam_juncs_LDFLAGS) $(LDFLAGS) -o $@
am_samtools_0_1_18_OBJECTS =
samtools_0_1_18_OBJECTS = $(am_samtools_0_1_18_OBJECTS)
samtools_0_1_18_LDADD = $(LDADD)
@@ -132,16 +166,46 @@ am_segment_juncs_OBJECTS = segment_juncs.$(OBJEXT)
segment_juncs_OBJECTS = $(am_segment_juncs_OBJECTS)
segment_juncs_DEPENDENCIES = $(top_builddir)/src/libtophat.a \
$(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+segment_juncs_LINK = $(CXXLD) $(AM_CXXFLAGS) $(CXXFLAGS) \
+ $(segment_juncs_LDFLAGS) $(LDFLAGS) -o $@
am_tophat_reports_OBJECTS = tophat_reports.$(OBJEXT)
tophat_reports_OBJECTS = $(am_tophat_reports_OBJECTS)
tophat_reports_DEPENDENCIES = $(top_builddir)/src/libtophat.a \
$(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
-binSCRIPT_INSTALL = $(INSTALL_SCRIPT)
-dist_binSCRIPT_INSTALL = $(INSTALL_SCRIPT)
+tophat_reports_LINK = $(CXXLD) $(AM_CXXFLAGS) $(CXXFLAGS) \
+ $(tophat_reports_LDFLAGS) $(LDFLAGS) -o $@
+am__vpath_adj_setup = srcdirstrip=`echo "$(srcdir)" | sed 's|.|.|g'`;
+am__vpath_adj = case $$p in \
+ $(srcdir)/*) f=`echo "$$p" | sed "s|^$$srcdirstrip/||"`;; \
+ *) f=$$p;; \
+ esac;
+am__strip_dir = f=`echo $$p | sed -e 's|^.*/||'`;
+am__install_max = 40
+am__nobase_strip_setup = \
+ srcdirstrip=`echo "$(srcdir)" | sed 's/[].[^$$\\*|]/\\\\&/g'`
+am__nobase_strip = \
+ for p in $$list; do echo "$$p"; done | sed -e "s|$$srcdirstrip/||"
+am__nobase_list = $(am__nobase_strip_setup); \
+ for p in $$list; do echo "$$p $$p"; done | \
+ sed "s| $$srcdirstrip/| |;"' / .*\//!s/ .*/ ./; s,\( .*\)/[^/]*$$,\1,' | \
+ $(AWK) 'BEGIN { files["."] = "" } { files[$$2] = files[$$2] " " $$1; \
+ if (++n[$$2] == $(am__install_max)) \
+ { print $$2, files[$$2]; n[$$2] = 0; files[$$2] = "" } } \
+ END { for (dir in files) print dir, files[dir] }'
+am__base_list = \
+ sed '$$!N;$$!N;$$!N;$$!N;$$!N;$$!N;$$!N;s/\n/ /g' | \
+ sed '$$!N;$$!N;$$!N;$$!N;s/\n/ /g'
+am__uninstall_files_from_dir = { \
+ test -z "$$files" \
+ || { test ! -d "$$dir" && test ! -f "$$dir" && test ! -r "$$dir"; } \
+ || { echo " ( cd '$$dir' && rm -f" $$files ")"; \
+ $(am__cd) "$$dir" && rm -f $$files; }; \
+ }
SCRIPTS = $(bin_SCRIPTS) $(dist_bin_SCRIPTS)
-DEFAULT_INCLUDES = -I. -I$(srcdir) -I$(top_builddir)
+DEFAULT_INCLUDES = -I. at am__isrc@ -I$(top_builddir)
depcomp = $(SHELL) $(top_srcdir)/depcomp
am__depfiles_maybe = depfiles
+am__mv = mv -f
COMPILE = $(CC) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) \
$(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS)
CCLD = $(CC)
@@ -167,14 +231,18 @@ DIST_SOURCES = $(libbam_a_SOURCES) $(libgc_a_SOURCES) \
$(map2gtf_SOURCES) $(prep_reads_SOURCES) $(sam_juncs_SOURCES) \
$(samtools_0_1_18_SOURCES) $(segment_juncs_SOURCES) \
$(tophat_reports_SOURCES)
+am__can_run_installinfo = \
+ case $$AM_UPDATE_INFO_DIR in \
+ n|no|NO) false;; \
+ *) (install-info --version) >/dev/null 2>&1;; \
+ esac
HEADERS = $(noinst_HEADERS)
ETAGS = etags
CTAGS = ctags
DISTFILES = $(DIST_COMMON) $(DIST_SOURCES) $(TEXINFOS) $(EXTRA_DIST)
ACLOCAL = @ACLOCAL@
-AMDEP_FALSE = @AMDEP_FALSE@
-AMDEP_TRUE = @AMDEP_TRUE@
AMTAR = @AMTAR@
+AR = @AR@
AUTOCONF = @AUTOCONF@
AUTOHEADER = @AUTOHEADER@
AUTOMAKE = @AUTOMAKE@
@@ -201,6 +269,8 @@ ECHO_N = @ECHO_N@
ECHO_T = @ECHO_T@
EGREP = @EGREP@
EXEEXT = @EXEEXT@
+GREP = @GREP@
+INSTALL = @INSTALL@
INSTALL_DATA = @INSTALL_DATA@
INSTALL_PROGRAM = @INSTALL_PROGRAM@
INSTALL_SCRIPT = @INSTALL_SCRIPT@
@@ -210,12 +280,14 @@ LIBOBJS = @LIBOBJS@
LIBS = @LIBS@
LTLIBOBJS = @LTLIBOBJS@
MAKEINFO = @MAKEINFO@
+MKDIR_P = @MKDIR_P@
OBJEXT = @OBJEXT@
PACKAGE = @PACKAGE@
PACKAGE_BUGREPORT = @PACKAGE_BUGREPORT@
PACKAGE_NAME = @PACKAGE_NAME@
PACKAGE_STRING = @PACKAGE_STRING@
PACKAGE_TARNAME = @PACKAGE_TARNAME@
+PACKAGE_URL = @PACKAGE_URL@
PACKAGE_VERSION = @PACKAGE_VERSION@
PATH_SEPARATOR = @PATH_SEPARATOR@
PYTHON = @PYTHON@
@@ -228,14 +300,13 @@ SET_MAKE = @SET_MAKE@
SHELL = @SHELL@
STRIP = @STRIP@
VERSION = @VERSION@
+abs_builddir = @abs_builddir@
+abs_srcdir = @abs_srcdir@
+abs_top_builddir = @abs_top_builddir@
+abs_top_srcdir = @abs_top_srcdir@
+ac_ct_AR = @ac_ct_AR@
ac_ct_CC = @ac_ct_CC@
ac_ct_CXX = @ac_ct_CXX@
-ac_ct_RANLIB = @ac_ct_RANLIB@
-ac_ct_STRIP = @ac_ct_STRIP@
-am__fastdepCC_FALSE = @am__fastdepCC_FALSE@
-am__fastdepCC_TRUE = @am__fastdepCC_TRUE@
-am__fastdepCXX_FALSE = @am__fastdepCXX_FALSE@
-am__fastdepCXX_TRUE = @am__fastdepCXX_TRUE@
am__include = @am__include@
am__leading_dot = @am__leading_dot@
am__quote = @am__quote@
@@ -247,32 +318,44 @@ build_alias = @build_alias@
build_cpu = @build_cpu@
build_os = @build_os@
build_vendor = @build_vendor@
+builddir = @builddir@
datadir = @datadir@
+datarootdir = @datarootdir@
+docdir = @docdir@
+dvidir = @dvidir@
exec_prefix = @exec_prefix@
host = @host@
host_alias = @host_alias@
host_cpu = @host_cpu@
host_os = @host_os@
host_vendor = @host_vendor@
+htmldir = @htmldir@
includedir = @includedir@
infodir = @infodir@
install_sh = @install_sh@
libdir = @libdir@
libexecdir = @libexecdir@
+localedir = @localedir@
localstatedir = @localstatedir@
mandir = @mandir@
mkdir_p = @mkdir_p@
oldincludedir = @oldincludedir@
+pdfdir = @pdfdir@
pkgpyexecdir = @pkgpyexecdir@
pkgpythondir = @pkgpythondir@
prefix = @prefix@
program_transform_name = @program_transform_name@
+psdir = @psdir@
pyexecdir = @pyexecdir@
pythondir = @pythondir@
sbindir = @sbindir@
sharedstatedir = @sharedstatedir@
+srcdir = @srcdir@
sysconfdir = @sysconfdir@
target_alias = @target_alias@
+top_build_prefix = @top_build_prefix@
+top_builddir = @top_builddir@
+top_srcdir = @top_srcdir@
# Generated with
# find SeqAn-1.3 -type f -print | grep -v ".svn" | sed 's/$/ \\/g'
@@ -965,40 +1048,40 @@ libgc_a_SOURCES = \
#-- program sources
prep_reads_SOURCES = prep_reads.cpp
prep_reads_LDADD = $(top_builddir)/src/libtophat.a $(BAM_LIB)
-prep_reads_LDFLAGS = $(LDFLAGS) $(BAM_LDFLAGS)
+prep_reads_LDFLAGS = $(BAM_LDFLAGS) $(LDFLAGS)
segment_juncs_SOURCES = segment_juncs.cpp
segment_juncs_LDADD = $(top_builddir)/src/libtophat.a $(BOOST_THREAD_LIBS) $(BOOST_SYSTEM_LIB) $(BAM_LIB)
-segment_juncs_LDFLAGS = $(LDFLAGS) $(BOOST_LDFLAGS) $(BAM_LDFLAGS)
+segment_juncs_LDFLAGS = $(BAM_LDFLAGS) $(LDFLAGS) $(BOOST_LDFLAGS)
long_spanning_reads_SOURCES = long_spanning_reads.cpp
long_spanning_reads_LDADD = $(top_builddir)/src/libtophat.a $(BOOST_THREAD_LIBS) $(BOOST_SYSTEM_LIB) $(BAM_LIB)
-long_spanning_reads_LDFLAGS = $(LDFLAGS) $(BOOST_LDFLAGS) $(BAM_LDFLAGS)
+long_spanning_reads_LDFLAGS = $(BAM_LDFLAGS) $(LDFLAGS) $(BOOST_LDFLAGS)
gtf_juncs_SOURCES = gtf_juncs.cpp
gtf_juncs_LDADD = $(top_builddir)/src/libtophat.a libgc.a $(BAM_LIB)
-gtf_juncs_LDFLAGS = $(LDFLAGS) $(BAM_LDFLAGS)
+gtf_juncs_LDFLAGS = $(BAM_LDFLAGS) $(LDFLAGS)
juncs_db_SOURCES = juncs_db.cpp
juncs_db_LDADD = $(top_builddir)/src/libtophat.a $(BAM_LIB)
-juncs_db_LDFLAGS = $(LDFLAGS) $(BAM_LDFLAGS)
+juncs_db_LDFLAGS = $(BAM_LDFLAGS) $(LDFLAGS)
tophat_reports_SOURCES = tophat_reports.cpp
tophat_reports_LDADD = $(top_builddir)/src/libtophat.a $(BOOST_THREAD_LIBS) $(BOOST_SYSTEM_LIB) $(BAM_LIB)
-tophat_reports_LDFLAGS = $(LDFLAGS) $(BOOST_LDFLAGS) $(BAM_LDFLAGS)
+tophat_reports_LDFLAGS = $(BAM_LDFLAGS) $(LDFLAGS) $(BOOST_LDFLAGS)
fix_map_ordering_SOURCES = fix_map_ordering.cpp
fix_map_ordering_LDADD = $(top_builddir)/src/libtophat.a $(BAM_LIB)
-fix_map_ordering_LDFLAGS = $(LDFLAGS) $(BAM_LDFLAGS)
+fix_map_ordering_LDFLAGS = $(BAM_LDFLAGS) $(LDFLAGS)
bam2fastx_SOURCES = bam2fastx.cpp
bam2fastx_LDADD = $(top_builddir)/src/libgc.a $(BAM_LIB)
-bam2fastx_LDFLAGS = $(LDFLAGS) $(BAM_LDFLAGS)
+bam2fastx_LDFLAGS = $(BAM_LDFLAGS) $(LDFLAGS)
bam_merge_SOURCES = bam_merge.cpp
bam_merge_LDADD = $(top_builddir)/src/libtophat.a $(top_builddir)/src/libgc.a $(BAM_LIB)
-bam_merge_LDFLAGS = $(LDFLAGS) $(BAM_LDFLAGS)
+bam_merge_LDFLAGS = $(BAM_LDFLAGS) $(LDFLAGS)
sam_juncs_SOURCES = sam_juncs.cpp
sam_juncs_LDADD = $(top_builddir)/src/libtophat.a $(BAM_LIB)
-sam_juncs_LDFLAGS = $(LDFLAGS) $(BAM_LDFLAGS)
+sam_juncs_LDFLAGS = $(BAM_LDFLAGS) $(LDFLAGS)
map2gtf_SOURCES = map2gtf.cpp
map2gtf_LDADD = $(top_builddir)/src/libtophat.a libgc.a $(BAM_LIB)
-map2gtf_LDFLAGS = $(LDFLAGS) $(BAM_LDFLAGS)
+map2gtf_LDFLAGS = $(BAM_LDFLAGS) $(LDFLAGS)
gtf_to_fasta_SOURCES = GTFToFasta.cpp FastaTools.cpp
gtf_to_fasta_LDADD = $(top_builddir)/src/libtophat.a libgc.a $(BAM_LIB)
-gtf_to_fasta_LDFLAGS = $(LDFLAGS) $(BAM_LDFLAGS)
+gtf_to_fasta_LDFLAGS = $(BAM_LDFLAGS) $(LDFLAGS)
libbam_a_SOURCES =
samtools_0_1_18_SOURCES =
all: all-am
@@ -1009,14 +1092,14 @@ $(srcdir)/Makefile.in: $(srcdir)/Makefile.am $(am__configure_deps)
@for dep in $?; do \
case '$(am__configure_deps)' in \
*$$dep*) \
- cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh \
- && exit 0; \
+ ( cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh ) \
+ && { if test -f $@; then exit 0; else break; fi; }; \
exit 1;; \
esac; \
done; \
- echo ' cd $(top_srcdir) && $(AUTOMAKE) --foreign src/Makefile'; \
- cd $(top_srcdir) && \
- $(AUTOMAKE) --foreign src/Makefile
+ echo ' cd $(top_srcdir) && $(AUTOMAKE) --foreign src/Makefile'; \
+ $(am__cd) $(top_srcdir) && \
+ $(AUTOMAKE) --foreign src/Makefile
.PRECIOUS: Makefile
Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
@case '$?' in \
@@ -1034,121 +1117,171 @@ $(top_srcdir)/configure: $(am__configure_deps)
cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh
$(ACLOCAL_M4): $(am__aclocal_m4_deps)
cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh
+$(am__aclocal_m4_deps):
clean-noinstLIBRARIES:
-test -z "$(noinst_LIBRARIES)" || rm -f $(noinst_LIBRARIES)
-libbam.a: $(libbam_a_OBJECTS) $(libbam_a_DEPENDENCIES)
+libbam.a: $(libbam_a_OBJECTS) $(libbam_a_DEPENDENCIES) $(EXTRA_libbam_a_DEPENDENCIES)
-rm -f libbam.a
$(libbam_a_AR) libbam.a $(libbam_a_OBJECTS) $(libbam_a_LIBADD)
$(RANLIB) libbam.a
-libgc.a: $(libgc_a_OBJECTS) $(libgc_a_DEPENDENCIES)
+libgc.a: $(libgc_a_OBJECTS) $(libgc_a_DEPENDENCIES) $(EXTRA_libgc_a_DEPENDENCIES)
-rm -f libgc.a
$(libgc_a_AR) libgc.a $(libgc_a_OBJECTS) $(libgc_a_LIBADD)
$(RANLIB) libgc.a
-libtophat.a: $(libtophat_a_OBJECTS) $(libtophat_a_DEPENDENCIES)
+libtophat.a: $(libtophat_a_OBJECTS) $(libtophat_a_DEPENDENCIES) $(EXTRA_libtophat_a_DEPENDENCIES)
-rm -f libtophat.a
$(libtophat_a_AR) libtophat.a $(libtophat_a_OBJECTS) $(libtophat_a_LIBADD)
$(RANLIB) libtophat.a
install-binPROGRAMS: $(bin_PROGRAMS)
@$(NORMAL_INSTALL)
- test -z "$(bindir)" || $(mkdir_p) "$(DESTDIR)$(bindir)"
- @list='$(bin_PROGRAMS)'; for p in $$list; do \
- p1=`echo $$p|sed 's/$(EXEEXT)$$//'`; \
- if test -f $$p \
- ; then \
- f=`echo "$$p1" | sed 's,^.*/,,;$(transform);s/$$/$(EXEEXT)/'`; \
- echo " $(INSTALL_PROGRAM_ENV) $(binPROGRAMS_INSTALL) '$$p' '$(DESTDIR)$(bindir)/$$f'"; \
- $(INSTALL_PROGRAM_ENV) $(binPROGRAMS_INSTALL) "$$p" "$(DESTDIR)$(bindir)/$$f" || exit 1; \
- else :; fi; \
- done
+ @list='$(bin_PROGRAMS)'; test -n "$(bindir)" || list=; \
+ if test -n "$$list"; then \
+ echo " $(MKDIR_P) '$(DESTDIR)$(bindir)'"; \
+ $(MKDIR_P) "$(DESTDIR)$(bindir)" || exit 1; \
+ fi; \
+ for p in $$list; do echo "$$p $$p"; done | \
+ sed 's/$(EXEEXT)$$//' | \
+ while read p p1; do if test -f $$p; \
+ then echo "$$p"; echo "$$p"; else :; fi; \
+ done | \
+ sed -e 'p;s,.*/,,;n;h' -e 's|.*|.|' \
+ -e 'p;x;s,.*/,,;s/$(EXEEXT)$$//;$(transform);s/$$/$(EXEEXT)/' | \
+ sed 'N;N;N;s,\n, ,g' | \
+ $(AWK) 'BEGIN { files["."] = ""; dirs["."] = 1 } \
+ { d=$$3; if (dirs[d] != 1) { print "d", d; dirs[d] = 1 } \
+ if ($$2 == $$4) files[d] = files[d] " " $$1; \
+ else { print "f", $$3 "/" $$4, $$1; } } \
+ END { for (d in files) print "f", d, files[d] }' | \
+ while read type dir files; do \
+ if test "$$dir" = .; then dir=; else dir=/$$dir; fi; \
+ test -z "$$files" || { \
+ echo " $(INSTALL_PROGRAM_ENV) $(INSTALL_PROGRAM) $$files '$(DESTDIR)$(bindir)$$dir'"; \
+ $(INSTALL_PROGRAM_ENV) $(INSTALL_PROGRAM) $$files "$(DESTDIR)$(bindir)$$dir" || exit $$?; \
+ } \
+ ; done
uninstall-binPROGRAMS:
@$(NORMAL_UNINSTALL)
- @list='$(bin_PROGRAMS)'; for p in $$list; do \
- f=`echo "$$p" | sed 's,^.*/,,;s/$(EXEEXT)$$//;$(transform);s/$$/$(EXEEXT)/'`; \
- echo " rm -f '$(DESTDIR)$(bindir)/$$f'"; \
- rm -f "$(DESTDIR)$(bindir)/$$f"; \
- done
+ @list='$(bin_PROGRAMS)'; test -n "$(bindir)" || list=; \
+ files=`for p in $$list; do echo "$$p"; done | \
+ sed -e 'h;s,^.*/,,;s/$(EXEEXT)$$//;$(transform)' \
+ -e 's/$$/$(EXEEXT)/' `; \
+ test -n "$$list" || exit 0; \
+ echo " ( cd '$(DESTDIR)$(bindir)' && rm -f" $$files ")"; \
+ cd "$(DESTDIR)$(bindir)" && rm -f $$files
clean-binPROGRAMS:
-test -z "$(bin_PROGRAMS)" || rm -f $(bin_PROGRAMS)
-bam2fastx$(EXEEXT): $(bam2fastx_OBJECTS) $(bam2fastx_DEPENDENCIES)
+bam2fastx$(EXEEXT): $(bam2fastx_OBJECTS) $(bam2fastx_DEPENDENCIES) $(EXTRA_bam2fastx_DEPENDENCIES)
@rm -f bam2fastx$(EXEEXT)
- $(CXXLINK) $(bam2fastx_LDFLAGS) $(bam2fastx_OBJECTS) $(bam2fastx_LDADD) $(LIBS)
-bam_merge$(EXEEXT): $(bam_merge_OBJECTS) $(bam_merge_DEPENDENCIES)
+ $(bam2fastx_LINK) $(bam2fastx_OBJECTS) $(bam2fastx_LDADD) $(LIBS)
+bam_merge$(EXEEXT): $(bam_merge_OBJECTS) $(bam_merge_DEPENDENCIES) $(EXTRA_bam_merge_DEPENDENCIES)
@rm -f bam_merge$(EXEEXT)
- $(CXXLINK) $(bam_merge_LDFLAGS) $(bam_merge_OBJECTS) $(bam_merge_LDADD) $(LIBS)
-fix_map_ordering$(EXEEXT): $(fix_map_ordering_OBJECTS) $(fix_map_ordering_DEPENDENCIES)
+ $(bam_merge_LINK) $(bam_merge_OBJECTS) $(bam_merge_LDADD) $(LIBS)
+fix_map_ordering$(EXEEXT): $(fix_map_ordering_OBJECTS) $(fix_map_ordering_DEPENDENCIES) $(EXTRA_fix_map_ordering_DEPENDENCIES)
@rm -f fix_map_ordering$(EXEEXT)
- $(CXXLINK) $(fix_map_ordering_LDFLAGS) $(fix_map_ordering_OBJECTS) $(fix_map_ordering_LDADD) $(LIBS)
-gtf_juncs$(EXEEXT): $(gtf_juncs_OBJECTS) $(gtf_juncs_DEPENDENCIES)
+ $(fix_map_ordering_LINK) $(fix_map_ordering_OBJECTS) $(fix_map_ordering_LDADD) $(LIBS)
+gtf_juncs$(EXEEXT): $(gtf_juncs_OBJECTS) $(gtf_juncs_DEPENDENCIES) $(EXTRA_gtf_juncs_DEPENDENCIES)
@rm -f gtf_juncs$(EXEEXT)
- $(CXXLINK) $(gtf_juncs_LDFLAGS) $(gtf_juncs_OBJECTS) $(gtf_juncs_LDADD) $(LIBS)
-gtf_to_fasta$(EXEEXT): $(gtf_to_fasta_OBJECTS) $(gtf_to_fasta_DEPENDENCIES)
+ $(gtf_juncs_LINK) $(gtf_juncs_OBJECTS) $(gtf_juncs_LDADD) $(LIBS)
+gtf_to_fasta$(EXEEXT): $(gtf_to_fasta_OBJECTS) $(gtf_to_fasta_DEPENDENCIES) $(EXTRA_gtf_to_fasta_DEPENDENCIES)
@rm -f gtf_to_fasta$(EXEEXT)
- $(CXXLINK) $(gtf_to_fasta_LDFLAGS) $(gtf_to_fasta_OBJECTS) $(gtf_to_fasta_LDADD) $(LIBS)
-juncs_db$(EXEEXT): $(juncs_db_OBJECTS) $(juncs_db_DEPENDENCIES)
+ $(gtf_to_fasta_LINK) $(gtf_to_fasta_OBJECTS) $(gtf_to_fasta_LDADD) $(LIBS)
+juncs_db$(EXEEXT): $(juncs_db_OBJECTS) $(juncs_db_DEPENDENCIES) $(EXTRA_juncs_db_DEPENDENCIES)
@rm -f juncs_db$(EXEEXT)
- $(CXXLINK) $(juncs_db_LDFLAGS) $(juncs_db_OBJECTS) $(juncs_db_LDADD) $(LIBS)
-long_spanning_reads$(EXEEXT): $(long_spanning_reads_OBJECTS) $(long_spanning_reads_DEPENDENCIES)
+ $(juncs_db_LINK) $(juncs_db_OBJECTS) $(juncs_db_LDADD) $(LIBS)
+long_spanning_reads$(EXEEXT): $(long_spanning_reads_OBJECTS) $(long_spanning_reads_DEPENDENCIES) $(EXTRA_long_spanning_reads_DEPENDENCIES)
@rm -f long_spanning_reads$(EXEEXT)
- $(CXXLINK) $(long_spanning_reads_LDFLAGS) $(long_spanning_reads_OBJECTS) $(long_spanning_reads_LDADD) $(LIBS)
-map2gtf$(EXEEXT): $(map2gtf_OBJECTS) $(map2gtf_DEPENDENCIES)
+ $(long_spanning_reads_LINK) $(long_spanning_reads_OBJECTS) $(long_spanning_reads_LDADD) $(LIBS)
+map2gtf$(EXEEXT): $(map2gtf_OBJECTS) $(map2gtf_DEPENDENCIES) $(EXTRA_map2gtf_DEPENDENCIES)
@rm -f map2gtf$(EXEEXT)
- $(CXXLINK) $(map2gtf_LDFLAGS) $(map2gtf_OBJECTS) $(map2gtf_LDADD) $(LIBS)
-prep_reads$(EXEEXT): $(prep_reads_OBJECTS) $(prep_reads_DEPENDENCIES)
+ $(map2gtf_LINK) $(map2gtf_OBJECTS) $(map2gtf_LDADD) $(LIBS)
+prep_reads$(EXEEXT): $(prep_reads_OBJECTS) $(prep_reads_DEPENDENCIES) $(EXTRA_prep_reads_DEPENDENCIES)
@rm -f prep_reads$(EXEEXT)
- $(CXXLINK) $(prep_reads_LDFLAGS) $(prep_reads_OBJECTS) $(prep_reads_LDADD) $(LIBS)
-sam_juncs$(EXEEXT): $(sam_juncs_OBJECTS) $(sam_juncs_DEPENDENCIES)
+ $(prep_reads_LINK) $(prep_reads_OBJECTS) $(prep_reads_LDADD) $(LIBS)
+sam_juncs$(EXEEXT): $(sam_juncs_OBJECTS) $(sam_juncs_DEPENDENCIES) $(EXTRA_sam_juncs_DEPENDENCIES)
@rm -f sam_juncs$(EXEEXT)
- $(CXXLINK) $(sam_juncs_LDFLAGS) $(sam_juncs_OBJECTS) $(sam_juncs_LDADD) $(LIBS)
-samtools_0.1.18$(EXEEXT): $(samtools_0_1_18_OBJECTS) $(samtools_0_1_18_DEPENDENCIES)
+ $(sam_juncs_LINK) $(sam_juncs_OBJECTS) $(sam_juncs_LDADD) $(LIBS)
+samtools_0.1.18$(EXEEXT): $(samtools_0_1_18_OBJECTS) $(samtools_0_1_18_DEPENDENCIES) $(EXTRA_samtools_0_1_18_DEPENDENCIES)
@rm -f samtools_0.1.18$(EXEEXT)
- $(LINK) $(samtools_0_1_18_LDFLAGS) $(samtools_0_1_18_OBJECTS) $(samtools_0_1_18_LDADD) $(LIBS)
-segment_juncs$(EXEEXT): $(segment_juncs_OBJECTS) $(segment_juncs_DEPENDENCIES)
+ $(LINK) $(samtools_0_1_18_OBJECTS) $(samtools_0_1_18_LDADD) $(LIBS)
+segment_juncs$(EXEEXT): $(segment_juncs_OBJECTS) $(segment_juncs_DEPENDENCIES) $(EXTRA_segment_juncs_DEPENDENCIES)
@rm -f segment_juncs$(EXEEXT)
- $(CXXLINK) $(segment_juncs_LDFLAGS) $(segment_juncs_OBJECTS) $(segment_juncs_LDADD) $(LIBS)
-tophat_reports$(EXEEXT): $(tophat_reports_OBJECTS) $(tophat_reports_DEPENDENCIES)
+ $(segment_juncs_LINK) $(segment_juncs_OBJECTS) $(segment_juncs_LDADD) $(LIBS)
+tophat_reports$(EXEEXT): $(tophat_reports_OBJECTS) $(tophat_reports_DEPENDENCIES) $(EXTRA_tophat_reports_DEPENDENCIES)
@rm -f tophat_reports$(EXEEXT)
- $(CXXLINK) $(tophat_reports_LDFLAGS) $(tophat_reports_OBJECTS) $(tophat_reports_LDADD) $(LIBS)
+ $(tophat_reports_LINK) $(tophat_reports_OBJECTS) $(tophat_reports_LDADD) $(LIBS)
install-binSCRIPTS: $(bin_SCRIPTS)
@$(NORMAL_INSTALL)
- test -z "$(bindir)" || $(mkdir_p) "$(DESTDIR)$(bindir)"
- @list='$(bin_SCRIPTS)'; for p in $$list; do \
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+ if test -n "$$list"; then \
+ echo " $(MKDIR_P) '$(DESTDIR)$(bindir)'"; \
+ $(MKDIR_P) "$(DESTDIR)$(bindir)" || exit 1; \
+ fi; \
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- $(binSCRIPT_INSTALL) "$$d$$p" "$(DESTDIR)$(bindir)/$$f"; \
- else :; fi; \
- done
+ if test -f "$$d$$p"; then echo "$$d$$p"; echo "$$p"; else :; fi; \
+ done | \
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+ -e 'h;s|.*|.|' \
+ -e 'p;x;s,.*/,,;$(transform)' | sed 'N;N;N;s,\n, ,g' | \
+ $(AWK) 'BEGIN { files["."] = ""; dirs["."] = 1; } \
+ { d=$$3; if (dirs[d] != 1) { print "d", d; dirs[d] = 1 } \
+ if ($$2 == $$4) { files[d] = files[d] " " $$1; \
+ if (++n[d] == $(am__install_max)) { \
+ print "f", d, files[d]; n[d] = 0; files[d] = "" } } \
+ else { print "f", d "/" $$4, $$1 } } \
+ END { for (d in files) print "f", d, files[d] }' | \
+ while read type dir files; do \
+ if test "$$dir" = .; then dir=; else dir=/$$dir; fi; \
+ test -z "$$files" || { \
+ echo " $(INSTALL_SCRIPT) $$files '$(DESTDIR)$(bindir)$$dir'"; \
+ $(INSTALL_SCRIPT) $$files "$(DESTDIR)$(bindir)$$dir" || exit $$?; \
+ } \
+ ; done
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- echo " rm -f '$(DESTDIR)$(bindir)/$$f'"; \
- rm -f "$(DESTDIR)$(bindir)/$$f"; \
- done
+ @list='$(bin_SCRIPTS)'; test -n "$(bindir)" || exit 0; \
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install-dist_binSCRIPTS: $(dist_bin_SCRIPTS)
@$(NORMAL_INSTALL)
- test -z "$(bindir)" || $(mkdir_p) "$(DESTDIR)$(bindir)"
- @list='$(dist_bin_SCRIPTS)'; for p in $$list; do \
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- else :; fi; \
- done
+ if test -f "$$d$$p"; then echo "$$d$$p"; echo "$$p"; else :; fi; \
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+ -e 'h;s|.*|.|' \
+ -e 'p;x;s,.*/,,;$(transform)' | sed 'N;N;N;s,\n, ,g' | \
+ $(AWK) 'BEGIN { files["."] = ""; dirs["."] = 1; } \
+ { d=$$3; if (dirs[d] != 1) { print "d", d; dirs[d] = 1 } \
+ if ($$2 == $$4) { files[d] = files[d] " " $$1; \
+ if (++n[d] == $(am__install_max)) { \
+ print "f", d, files[d]; n[d] = 0; files[d] = "" } } \
+ else { print "f", d "/" $$4, $$1 } } \
+ END { for (d in files) print "f", d, files[d] }' | \
+ while read type dir files; do \
+ if test "$$dir" = .; then dir=; else dir=/$$dir; fi; \
+ test -z "$$files" || { \
+ echo " $(INSTALL_SCRIPT) $$files '$(DESTDIR)$(bindir)$$dir'"; \
+ $(INSTALL_SCRIPT) $$files "$(DESTDIR)$(bindir)$$dir" || exit $$?; \
+ } \
+ ; done
uninstall-dist_binSCRIPTS:
@$(NORMAL_UNINSTALL)
- @list='$(dist_bin_SCRIPTS)'; for p in $$list; do \
- f=`echo "$$p" | sed 's|^.*/||;$(transform)'`; \
- echo " rm -f '$(DESTDIR)$(bindir)/$$f'"; \
- rm -f "$(DESTDIR)$(bindir)/$$f"; \
- done
+ @list='$(dist_bin_SCRIPTS)'; test -n "$(bindir)" || exit 0; \
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mostlyclean-compile:
-rm -f *.$(OBJEXT)
@@ -1193,107 +1326,126 @@ distclean-compile:
@AMDEP_TRUE@@am__include@ @am__quote at ./$(DEPDIR)/utils.Po at am__quote@
.c.o:
- at am__fastdepCC_TRUE@ if $(COMPILE) -MT $@ -MD -MP -MF "$(DEPDIR)/$*.Tpo" -c -o $@ $<; \
- at am__fastdepCC_TRUE@ then mv -f "$(DEPDIR)/$*.Tpo" "$(DEPDIR)/$*.Po"; else rm -f "$(DEPDIR)/$*.Tpo"; exit 1; fi
+ at am__fastdepCC_TRUE@ $(COMPILE) -MT $@ -MD -MP -MF $(DEPDIR)/$*.Tpo -c -o $@ $<
+ at am__fastdepCC_TRUE@ $(am__mv) $(DEPDIR)/$*.Tpo $(DEPDIR)/$*.Po
@AMDEP_TRUE@@am__fastdepCC_FALSE@ source='$<' object='$@' libtool=no @AMDEPBACKSLASH@
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@am__fastdepCC_FALSE@ $(COMPILE) -c $<
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- at am__fastdepCC_TRUE@ then mv -f "$(DEPDIR)/$*.Tpo" "$(DEPDIR)/$*.Po"; else rm -f "$(DEPDIR)/$*.Tpo"; exit 1; fi
+ at am__fastdepCC_TRUE@ $(COMPILE) -MT $@ -MD -MP -MF $(DEPDIR)/$*.Tpo -c -o $@ `$(CYGPATH_W) '$<'`
+ at am__fastdepCC_TRUE@ $(am__mv) $(DEPDIR)/$*.Tpo $(DEPDIR)/$*.Po
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- at am__fastdepCXX_TRUE@ then mv -f "$(DEPDIR)/$*.Tpo" "$(DEPDIR)/$*.Po"; else rm -f "$(DEPDIR)/$*.Tpo"; exit 1; fi
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@am__fastdepCXX_FALSE@ $(CXXCOMPILE) -c -o $@ $<
.cpp.obj:
- at am__fastdepCXX_TRUE@ if $(CXXCOMPILE) -MT $@ -MD -MP -MF "$(DEPDIR)/$*.Tpo" -c -o $@ `$(CYGPATH_W) '$<'`; \
- at am__fastdepCXX_TRUE@ then mv -f "$(DEPDIR)/$*.Tpo" "$(DEPDIR)/$*.Po"; else rm -f "$(DEPDIR)/$*.Tpo"; exit 1; fi
+ at am__fastdepCXX_TRUE@ $(CXXCOMPILE) -MT $@ -MD -MP -MF $(DEPDIR)/$*.Tpo -c -o $@ `$(CYGPATH_W) '$<'`
+ at am__fastdepCXX_TRUE@ $(am__mv) $(DEPDIR)/$*.Tpo $(DEPDIR)/$*.Po
@AMDEP_TRUE@@am__fastdepCXX_FALSE@ source='$<' object='$@' libtool=no @AMDEPBACKSLASH@
@AMDEP_TRUE@@am__fastdepCXX_FALSE@ DEPDIR=$(DEPDIR) $(CXXDEPMODE) $(depcomp) @AMDEPBACKSLASH@
@am__fastdepCXX_FALSE@ $(CXXCOMPILE) -c -o $@ `$(CYGPATH_W) '$<'`
-uninstall-info-am:
ID: $(HEADERS) $(SOURCES) $(LISP) $(TAGS_FILES)
list='$(SOURCES) $(HEADERS) $(LISP) $(TAGS_FILES)'; \
unique=`for i in $$list; do \
if test -f "$$i"; then echo $$i; else echo $(srcdir)/$$i; fi; \
done | \
- $(AWK) ' { files[$$0] = 1; } \
- END { for (i in files) print i; }'`; \
+ $(AWK) '{ files[$$0] = 1; nonempty = 1; } \
+ END { if (nonempty) { for (i in files) print i; }; }'`; \
mkid -fID $$unique
tags: TAGS
TAGS: $(HEADERS) $(SOURCES) $(TAGS_DEPENDENCIES) \
$(TAGS_FILES) $(LISP)
- tags=; \
+ set x; \
here=`pwd`; \
list='$(SOURCES) $(HEADERS) $(LISP) $(TAGS_FILES)'; \
unique=`for i in $$list; do \
if test -f "$$i"; then echo $$i; else echo $(srcdir)/$$i; fi; \
done | \
- $(AWK) ' { files[$$0] = 1; } \
- END { for (i in files) print i; }'`; \
- if test -z "$(ETAGS_ARGS)$$tags$$unique"; then :; else \
+ $(AWK) '{ files[$$0] = 1; nonempty = 1; } \
+ END { if (nonempty) { for (i in files) print i; }; }'`; \
+ shift; \
+ if test -z "$(ETAGS_ARGS)$$*$$unique"; then :; else \
test -n "$$unique" || unique=$$empty_fix; \
- $(ETAGS) $(ETAGSFLAGS) $(AM_ETAGSFLAGS) $(ETAGS_ARGS) \
- $$tags $$unique; \
+ if test $$# -gt 0; then \
+ $(ETAGS) $(ETAGSFLAGS) $(AM_ETAGSFLAGS) $(ETAGS_ARGS) \
+ "$$@" $$unique; \
+ else \
+ $(ETAGS) $(ETAGSFLAGS) $(AM_ETAGSFLAGS) $(ETAGS_ARGS) \
+ $$unique; \
+ fi; \
fi
ctags: CTAGS
CTAGS: $(HEADERS) $(SOURCES) $(TAGS_DEPENDENCIES) \
$(TAGS_FILES) $(LISP)
- tags=; \
- here=`pwd`; \
list='$(SOURCES) $(HEADERS) $(LISP) $(TAGS_FILES)'; \
unique=`for i in $$list; do \
if test -f "$$i"; then echo $$i; else echo $(srcdir)/$$i; fi; \
done | \
- $(AWK) ' { files[$$0] = 1; } \
- END { for (i in files) print i; }'`; \
- test -z "$(CTAGS_ARGS)$$tags$$unique" \
+ $(AWK) '{ files[$$0] = 1; nonempty = 1; } \
+ END { if (nonempty) { for (i in files) print i; }; }'`; \
+ test -z "$(CTAGS_ARGS)$$unique" \
|| $(CTAGS) $(CTAGSFLAGS) $(AM_CTAGSFLAGS) $(CTAGS_ARGS) \
- $$tags $$unique
+ $$unique
GTAGS:
here=`$(am__cd) $(top_builddir) && pwd` \
- && cd $(top_srcdir) \
- && gtags -i $(GTAGS_ARGS) $$here
+ && $(am__cd) $(top_srcdir) \
+ && gtags -i $(GTAGS_ARGS) "$$here"
+
+cscopelist: $(HEADERS) $(SOURCES) $(LISP)
+ list='$(SOURCES) $(HEADERS) $(LISP)'; \
+ case "$(srcdir)" in \
+ [\\/]* | ?:[\\/]*) sdir="$(srcdir)" ;; \
+ *) sdir=$(subdir)/$(srcdir) ;; \
+ esac; \
+ for i in $$list; do \
+ if test -f "$$i"; then \
+ echo "$(subdir)/$$i"; \
+ else \
+ echo "$$sdir/$$i"; \
+ fi; \
+ done >> $(top_builddir)/cscope.files
distclean-tags:
-rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
distdir: $(DISTFILES)
- $(mkdir_p) $(distdir)/SeqAn-1.3 $(distdir)/SeqAn-1.3/seqan $(distdir)/SeqAn-1.3/seqan/align $(distdir)/SeqAn-1.3/seqan/basic $(distdir)/SeqAn-1.3/seqan/blast $(distdir)/SeqAn-1.3/seqan/chaining $(distdir)/SeqAn-1.3/seqan/consensus $(distdir)/SeqAn-1.3/seqan/file $(distdir)/SeqAn-1.3/seqan/find $(distdir)/SeqAn-1.3/seqan/find2 $(distdir)/SeqAn-1.3/seqan/find_motif $(distdir)/SeqAn-1.3/seqan/graph_algorithms $(distdir)/SeqAn-1.3/seqan/graph_align $(distdir)/SeqAn-1.3/seqan/graph_msa $(dis [...]
- @srcdirstrip=`echo "$(srcdir)" | sed 's|.|.|g'`; \
- topsrcdirstrip=`echo "$(top_srcdir)" | sed 's|.|.|g'`; \
- list='$(DISTFILES)'; for file in $$list; do \
- case $$file in \
- $(srcdir)/*) file=`echo "$$file" | sed "s|^$$srcdirstrip/||"`;; \
- $(top_srcdir)/*) file=`echo "$$file" | sed "s|^$$topsrcdirstrip/|$(top_builddir)/|"`;; \
- esac; \
+ @srcdirstrip=`echo "$(srcdir)" | sed 's/[].[^$$\\*]/\\\\&/g'`; \
+ topsrcdirstrip=`echo "$(top_srcdir)" | sed 's/[].[^$$\\*]/\\\\&/g'`; \
+ list='$(DISTFILES)'; \
+ dist_files=`for file in $$list; do echo $$file; done | \
+ sed -e "s|^$$srcdirstrip/||;t" \
+ -e "s|^$$topsrcdirstrip/|$(top_builddir)/|;t"`; \
+ case $$dist_files in \
+ */*) $(MKDIR_P) `echo "$$dist_files" | \
+ sed '/\//!d;s|^|$(distdir)/|;s,/[^/]*$$,,' | \
+ sort -u` ;; \
+ esac; \
+ for file in $$dist_files; do \
if test -f $$file || test -d $$file; then d=.; else d=$(srcdir); fi; \
- dir=`echo "$$file" | sed -e 's,/[^/]*$$,,'`; \
- if test "$$dir" != "$$file" && test "$$dir" != "."; then \
- dir="/$$dir"; \
- $(mkdir_p) "$(distdir)$$dir"; \
- else \
- dir=''; \
- fi; \
if test -d $$d/$$file; then \
+ dir=`echo "/$$file" | sed -e 's,/[^/]*$$,,'`; \
+ if test -d "$(distdir)/$$file"; then \
+ find "$(distdir)/$$file" -type d ! -perm -700 -exec chmod u+rwx {} \;; \
+ fi; \
if test -d $(srcdir)/$$file && test $$d != $(srcdir); then \
- cp -pR $(srcdir)/$$file $(distdir)$$dir || exit 1; \
+ cp -fpR $(srcdir)/$$file "$(distdir)$$dir" || exit 1; \
+ find "$(distdir)/$$file" -type d ! -perm -700 -exec chmod u+rwx {} \;; \
fi; \
- cp -pR $$d/$$file $(distdir)$$dir || exit 1; \
+ cp -fpR $$d/$$file "$(distdir)$$dir" || exit 1; \
else \
- test -f $(distdir)/$$file \
- || cp -p $$d/$$file $(distdir)/$$file \
+ test -f "$(distdir)/$$file" \
+ || cp -p $$d/$$file "$(distdir)/$$file" \
|| exit 1; \
fi; \
done
@@ -1302,7 +1454,7 @@ check: check-am
all-am: Makefile $(LIBRARIES) $(PROGRAMS) $(SCRIPTS) $(HEADERS)
installdirs:
for dir in "$(DESTDIR)$(bindir)" "$(DESTDIR)$(bindir)" "$(DESTDIR)$(bindir)"; do \
- test -z "$$dir" || $(mkdir_p) "$$dir"; \
+ test -z "$$dir" || $(MKDIR_P) "$$dir"; \
done
install: install-am
install-exec: install-exec-am
@@ -1314,10 +1466,15 @@ install-am: all-am
installcheck: installcheck-am
install-strip:
- $(MAKE) $(AM_MAKEFLAGS) INSTALL_PROGRAM="$(INSTALL_STRIP_PROGRAM)" \
- install_sh_PROGRAM="$(INSTALL_STRIP_PROGRAM)" INSTALL_STRIP_FLAG=-s \
- `test -z '$(STRIP)' || \
- echo "INSTALL_PROGRAM_ENV=STRIPPROG='$(STRIP)'"` install
+ if test -z '$(STRIP)'; then \
+ $(MAKE) $(AM_MAKEFLAGS) INSTALL_PROGRAM="$(INSTALL_STRIP_PROGRAM)" \
+ install_sh_PROGRAM="$(INSTALL_STRIP_PROGRAM)" INSTALL_STRIP_FLAG=-s \
+ install; \
+ else \
+ $(MAKE) $(AM_MAKEFLAGS) INSTALL_PROGRAM="$(INSTALL_STRIP_PROGRAM)" \
+ install_sh_PROGRAM="$(INSTALL_STRIP_PROGRAM)" INSTALL_STRIP_FLAG=-s \
+ "INSTALL_PROGRAM_ENV=STRIPPROG='$(STRIP)'" install; \
+ fi
mostlyclean-generic:
clean-generic:
@@ -1325,6 +1482,7 @@ clean-generic:
distclean-generic:
-test -z "$(CONFIG_CLEAN_FILES)" || rm -f $(CONFIG_CLEAN_FILES)
+ -test . = "$(srcdir)" || test -z "$(CONFIG_CLEAN_VPATH_FILES)" || rm -f $(CONFIG_CLEAN_VPATH_FILES)
maintainer-clean-generic:
@echo "This command is intended for maintainers to use"
@@ -1346,19 +1504,39 @@ dvi-am:
html: html-am
+html-am:
+
info: info-am
info-am:
install-data-am:
+install-dvi: install-dvi-am
+
+install-dvi-am:
+
install-exec-am: install-binPROGRAMS install-binSCRIPTS \
install-dist_binSCRIPTS
+install-html: install-html-am
+
+install-html-am:
+
install-info: install-info-am
+install-info-am:
+
install-man:
+install-pdf: install-pdf-am
+
+install-pdf-am:
+
+install-ps: install-ps-am
+
+install-ps-am:
+
installcheck-am:
maintainer-clean: maintainer-clean-am
@@ -1379,21 +1557,24 @@ ps: ps-am
ps-am:
uninstall-am: uninstall-binPROGRAMS uninstall-binSCRIPTS \
- uninstall-dist_binSCRIPTS uninstall-info-am
+ uninstall-dist_binSCRIPTS
+
+.MAKE: install-am install-strip
.PHONY: CTAGS GTAGS all all-am check check-am clean clean-binPROGRAMS \
- clean-generic clean-local clean-noinstLIBRARIES ctags \
- distclean distclean-compile distclean-generic distclean-tags \
- distdir dvi dvi-am html html-am info info-am install \
- install-am install-binPROGRAMS install-binSCRIPTS install-data \
- install-data-am install-dist_binSCRIPTS install-exec \
- install-exec-am install-info install-info-am install-man \
- install-strip installcheck installcheck-am installdirs \
- maintainer-clean maintainer-clean-generic mostlyclean \
- mostlyclean-compile mostlyclean-generic pdf pdf-am ps ps-am \
- tags uninstall uninstall-am uninstall-binPROGRAMS \
- uninstall-binSCRIPTS uninstall-dist_binSCRIPTS \
- uninstall-info-am
+ clean-generic clean-local clean-noinstLIBRARIES cscopelist \
+ ctags distclean distclean-compile distclean-generic \
+ distclean-tags distdir dvi dvi-am html html-am info info-am \
+ install install-am install-binPROGRAMS install-binSCRIPTS \
+ install-data install-data-am install-dist_binSCRIPTS \
+ install-dvi install-dvi-am install-exec install-exec-am \
+ install-html install-html-am install-info install-info-am \
+ install-man install-pdf install-pdf-am install-ps \
+ install-ps-am install-strip installcheck installcheck-am \
+ installdirs maintainer-clean maintainer-clean-generic \
+ mostlyclean mostlyclean-compile mostlyclean-generic pdf pdf-am \
+ ps ps-am tags uninstall uninstall-am uninstall-binPROGRAMS \
+ uninstall-binSCRIPTS uninstall-dist_binSCRIPTS
clean-local:
@@ -1409,6 +1590,7 @@ $(SAMPROG): $(SAMLIB)
$(SAMLIB):
cd $(SAMDIR) && make $(SAMPROG) && cp $(SAMLIB) $(SAMPROG) ..
+
# Tell versions [3.59,3.63) of GNU make to not export all variables.
# Otherwise a system limit (for SysV at least) may be exceeded.
.NOEXPORT:
diff --git a/src/bam_merge_impl.cpp b/src/bam_merge_impl.cpp
index 551e69a..56066db 100644
--- a/src/bam_merge_impl.cpp
+++ b/src/bam_merge_impl.cpp
@@ -45,8 +45,15 @@ BamMerge::BamMerge(const vector<string>& bam_fnames,
}
if (bam_fnames.size() == file_offsets.size() &&
- file_offsets[i] > 0)
- bgzf_seek(fp->x.bam, file_offsets[i], SEEK_SET);
+ file_offsets[i] > 0) {
+ int64_t rseek=bgzf_seek(fp->x.bam, file_offsets[i], SEEK_SET);
+//debugging
+#if 1
+ if (rseek!=0) warn_msg("Warning: bgzf_seek() failed for %s\n",
+ fname);
+
+#endif
+ }
bam1_t* b = bam_init1();
if (samread(fp, b) > 0) {
@@ -54,13 +61,19 @@ BamMerge::BamMerge(const vector<string>& bam_fnames,
CBamLine brec(_lines.size(), b, fp->header);
_lines.push(brec);
}
- else { bam_destroy1(b); }
- }
+ else {
+//debugging:
+#if 1
+ warn_msg("Warning: no input BAM records found in %s (possibly due to wrong offset)\n",fname);
+#endif
+ bam_destroy1(b);
+ }
+ } //read records from each file
- if (_lines.size() == 0) {
- warn_msg("Warning: no input BAM records found.\n");
- exit(1);
- }
+ /*if (_lines.size() == 0) {
+ warn_msg("Warning: no input BAM records found in input files.\n");
+ //exit(1);
+ }*/
}
BamMerge::~BamMerge()
diff --git a/src/common.cpp b/src/common.cpp
index e6173aa..acb1fea 100644
--- a/src/common.cpp
+++ b/src/common.cpp
@@ -881,6 +881,18 @@ string guess_packer(const string& fname, bool use_all_cpus) {
}
else picmd="bzip2";
}
+ else if (fext=="xz") {
+ if (use_all_cpus && str_endsWith(zpacker,"pxz")) {
+ picmd=zpacker;
+ if (num_threads<2) picmd.append(" -T 1");
+ else {
+ picmd.append(" -T ");
+ str_appendInt(picmd, num_threads);
+ //picmd.append(" -cd");
+ }
+ }
+ else picmd="xz";
+ }
return picmd;
}
diff --git a/src/reads.cpp b/src/reads.cpp
index d46debf..90a143d 100644
--- a/src/reads.cpp
+++ b/src/reads.cpp
@@ -17,6 +17,7 @@
#include <algorithm>
#include <cstring>
#include <cstdlib>
+#include <boost/smart_ptr/make_shared.hpp>
#include <seqan/find.h>
#include <seqan/file.h>
@@ -28,6 +29,8 @@
using namespace std;
+QReadData QReadDataValue::Null;
+
char* FLineReader::nextLine() {
if(!file) return NULL;
if (pushed) { pushed=false; return buf; }
@@ -528,7 +531,7 @@ bool ReadStream::next_read(QReadData& rdata) {
Read rf;
if (get_direct(rf)) {
uint64_t id = (uint64_t)atol(rf.name.c_str());
- QReadData rdata(id, rf, last_b());
+ QReadData rdata=boost::make_shared<QReadDataValue>(id, rf, last_b());
read_pq.push(rdata);
}
}
@@ -598,19 +601,19 @@ bool ReadStream::getRead(uint64_t r_id,
}
uint64_t id = (uint64_t)atol(read.name.c_str());
*/
- if (rdata.id >= end_id)
+ if (rdata->id >= end_id)
return false;
- if (rdata.id < begin_id)
+ if (rdata->id < begin_id)
continue; //silently skip until begin_id found
//does not trigger rProc->process() until begin_id
- if (rdata.id == r_id)
+ if (rdata->id == r_id)
{
- read=rdata.read; //it will be returned
+ read=rdata->read; //it will be returned
found=true;
}
- else if (rdata.id > r_id)
+ else if (rdata->id > r_id)
{ //can't find it, went too far
//only happens when reads [mates] were removed for some reason
//read_pq.push(make_pair(id, read));
@@ -639,23 +642,24 @@ bool ReadStream::getQRead(uint64_t r_id,
err_die("Error: ReadStream::getRead() called with out-of-order id#!");
last_id=r_id;
bool found=false;
- qread.clear();
+ //qread.clear();
+ qread.reset();
while (!found) {
QReadData rdata;
if (!next_read(rdata))
break;
- if (rdata.id >= end_id)
+ if (rdata->id >= end_id)
return false;
- if (rdata.id < begin_id)
+ if (rdata->id < begin_id)
continue; //silently skip until begin_id found
//does not trigger rProc->process() until begin_id
- if (rdata.id == r_id)
+ if (rdata->id == r_id)
{
qread=rdata; //it will be returned
found=true;
}
- else if (rdata.id > r_id)
+ else if (rdata->id > r_id)
{ //can't find it, went too far
//only happens when reads [mates] were removed for some reason
//read_pq.push(make_pair(id, read));
diff --git a/src/reads.h b/src/reads.h
index 9af4a7d..8e14310 100644
--- a/src/reads.h
+++ b/src/reads.h
@@ -13,37 +13,17 @@
#include <sstream>
#include <queue>
#include <limits>
+#include <boost/shared_ptr.hpp>
#include <seqan/sequence.h>
#include "common.h"
+//#include "QReadData.h"
using std::string;
-// Note: qualities are not currently used by TopHat
-struct Read
-{
- Read()
- {
- //seq.reserve(MAX_READ_LEN);
- //qual.reserve(MAX_READ_LEN);
- }
-
- string name;
- string seq;
- string alt_name;
- string qual;
-
- bool lengths_equal() { return seq.length() == qual.length(); }
- void clear()
- {
- name.clear();
- seq.clear();
- qual.clear();
- alt_name.clear();
- }
-};
+
void reverse_complement(string& seq);
string str_convert_color_to_bp(const string& color);
@@ -134,23 +114,58 @@ public:
}
};
+
+
+// Note: qualities are not currently used by TopHat
+struct Read
+{
+ Read()
+ {
+ //seq.reserve(MAX_READ_LEN);
+ //qual.reserve(MAX_READ_LEN);
+ }
+
+ string name;
+ string seq;
+ string alt_name;
+ string qual;
+
+ bool lengths_equal() { return seq.length() == qual.length(); }
+ void clear()
+ {
+ name.clear();
+ seq.clear();
+ qual.clear();
+ alt_name.clear();
+ }
+};
+
+
ReadFormat skip_lines(FLineReader& fr);
bool next_fastx_read(FLineReader& fr, Read& read, ReadFormat rd_format=FASTQ,
FLineReader* frq=NULL);
#define READSTREAM_BUF_SIZE 500000
-struct QReadData { //read data for the priority queue
+
+
+struct QReadDataValue;
+typedef boost::shared_ptr<QReadDataValue> QReadData;
+
+struct QReadDataValue { //read data for the priority queue
uint64_t id;
Read read;
char trashCode; //ZT tag value
int8_t matenum; //mate number (1,2) 0 if unpaired
bool um_written;
- QReadData():id(0),read(),trashCode(0), matenum(0), um_written(false) { }
- QReadData(uint64_t rid, Read& rd, bam1_t* bd=NULL) {
+
+ static QReadData Null;
+
+ QReadDataValue():id(0),read(),trashCode(0), matenum(0), um_written(false) { }
+ QReadDataValue(uint64_t rid, const Read& rd, bam1_t* bd=NULL) {
init(rid, rd, bd);
}
- void init(uint64_t rid, Read& rd, bam1_t* bd=NULL) {
+ void init(uint64_t rid, const Read& rd, bam1_t* bd=NULL) {
id=rid;
read=rd;
trashCode=0;
@@ -177,6 +192,31 @@ struct QReadData { //read data for the priority queue
};
+/*typedef struct { //read data for the priority queue
+ size_t refCount;
+ uint64_t id;
+ Read read;
+ char trashCode; //ZT tag value
+ int8_t matenum; //mate number (1,2) 0 if unpaired
+ bool um_written;
+
+ QReadDataValue():id(0),read(),trashCode(0), matenum(0), um_written(false),refCount(1) {}
+ QReadDataValue(uint64_t rid, Read& rd, bam1_t* bd=NULL);
+ ~QReadDataValue();
+
+ void clear();
+ // void init(uint64_t rid, Read& rd, bam1_t* bd=NULL);
+} QReadDataValue;*/
+
+
+
+
+
+/*void deleteQReadDataValue() {
+ // nothing to do for the moment. May be interesting later to log deletion.
+}*/
+
+
//callback struct for ReadStream::getRead() - called for each read in the stream
struct GetReadProc {
GBamWriter* um_out; //skipped (unmapped) reads will be written here
@@ -192,36 +232,37 @@ struct GetReadProc {
um_out(bamw), unmapped_counter(um_counter), multimapped_counter(mm_counter),
u_unmapped_counter(u_um_counter), u_multimapped_counter(u_mm_counter)
{ }
+
virtual bool process(QReadData& rdata, bool& found) { //, bool is_unmapped) {
//should return True - if it returns FALSE it will cause getRead() to abort
//(stops looking for target readId in the stream) and to return false (="not found")
return true;
}
- void writeUnmapped(QReadData& rdata) {
- if (rdata.um_written) return;
- string rname(rdata.read.alt_name);
+ void writeUnmapped(const QReadData& rdata) {
+ if (rdata->um_written) return;
+ string rname(rdata->read.alt_name);
size_t slash_pos=rname.rfind('/');
if (slash_pos!=string::npos && rname.length()-slash_pos<4)
rname.resize(slash_pos);
- GBamRecord bamrec(rname.c_str(), -1, 0, false, rdata.read.seq.c_str(),
- NULL, rdata.read.qual.c_str());
- if (rdata.matenum) {
+ GBamRecord bamrec(rname.c_str(), -1, 0, false, rdata->read.seq.c_str(),
+ NULL, rdata->read.qual.c_str());
+ if (rdata->matenum) {
bamrec.set_flag(BAM_FPAIRED);
- if (rdata.matenum==1) bamrec.set_flag(BAM_FREAD1);
+ if (rdata->matenum==1) bamrec.set_flag(BAM_FREAD1);
else bamrec.set_flag(BAM_FREAD2);
}
- //if (found && um_code && !rdata.trashCode) {
- //rdata.trashCode=um_code;
+ //if (found && um_code && !rdata->trashCode) {
+ //rdata->trashCode=um_code;
//}
- if (rdata.trashCode) {
+ if (rdata->trashCode) {
//multi-mapped reads did not really QC-fail
//should also not be written to unmapped.bam
- bamrec.add_aux("ZT", 'A', 1, (uint8_t*)&rdata.trashCode);
- //if (rdata.trashCode!='M')
+ bamrec.add_aux("ZT", 'A', 1, (uint8_t*)&rdata->trashCode);
+ //if (rdata->trashCode!='M')
//bamrec.set_flag(BAM_FQCFAIL); //to be excluded from further processing?
}
um_out->write(&bamrec);
- rdata.um_written=true;
+ rdata->um_written=true;
}
virtual ~GetReadProc() { }
@@ -241,7 +282,7 @@ class ReadStream {
{
bool operator()(QReadData& lhs, QReadData& rhs)
{
- return (lhs.id > rhs.id);
+ return (lhs->id > rhs->id);
}
};
FZPipe fstream;
@@ -384,6 +425,7 @@ class ReadStream {
void rewind() {
fstream.rewind();
+ r_eof=false;
clear();
if (flseqs) {
flseqs->reset(fstream);
@@ -393,18 +435,23 @@ class ReadStream {
flquals->reset(*fquals);
}
}
+
void seek(int64_t offset) {
clear();
fstream.seek(offset);
}
+
FILE* file() {
return fstream.file;
}
+
void clear() {
read_pq=std::priority_queue< QReadData,
std::vector<QReadData>,
ReadOrdering > ();
+ last_id=0;
}
+
void close() {
clear();
fstream.close();
diff --git a/src/tophat-fusion-post b/src/tophat-fusion-post
index f704ff3..6580178 100755
--- a/src/tophat-fusion-post
+++ b/src/tophat-fusion-post
@@ -2588,7 +2588,7 @@ def prog_path(program):
def get_version():
- return "2.0.13"
+ return "2.0.14"
def main(argv=None):
diff --git a/src/tophat.py b/src/tophat.py
index 2310a49..2f4baa9 100755
--- a/src/tophat.py
+++ b/src/tophat.py
@@ -24,7 +24,7 @@ import re
import glob
import signal
from datetime import datetime, date, time
-from shutil import copy, rmtree
+from shutil import copy, rmtree, move
import logging
use_message = '''
@@ -382,7 +382,9 @@ class TopHatParams:
if self.zipper:
use_zpacker=True
if self.num_threads>1 and not self.zipper_opts:
- if self.zipper.endswith('pbzip2') or self.zipper.endswith('pigz'):
+ if self.zipper.endswith('pxz'):
+ self.zipper_opts.append('-T'+str(self.num_threads))
+ elif self.zipper.endswith('pbzip2') or self.zipper.endswith('pigz'):
self.zipper_opts.append('-p'+str(self.num_threads))
else:
use_zpacker=False
@@ -1757,6 +1759,8 @@ class ZReader:
if guess:
if s.endswith(".z") or s.endswith(".gz") or s.endswith(".gzip"):
pipecmd=['gzip']
+ elif s.endswith(".xz"):
+ pipecmd=['xz']
else:
if s.endswith(".bz2") or s.endswith(".bzip2") or s.endswith(".bzip"):
pipecmd=['bzip2']
@@ -1766,6 +1770,9 @@ class ZReader:
if pipecmd[0]=='gzip' and sys_params.zipper.endswith('pigz'):
pipecmd[0]=sys_params.zipper
pipecmd.extend(sys_params.zipper_opts)
+ elif pipecmd[0]=='xz' and sys_params.zipper.endswith('pxz'):
+ pipecmd[0]=sys_params.zipper
+ pipecmd.extend(sys_params.zipper_opts)
elif pipecmd[0]=='bzip2' and sys_params.zipper.endswith('pbzip2'):
pipecmd[0]=sys_params.zipper
pipecmd.extend(sys_params.zipper_opts)
@@ -2796,7 +2803,7 @@ def compile_reports(params, sam_header_filename, ref_fasta, mappings, readfiles,
for bam_part in bam_parts:
os.remove(bam_part)
else: # only one file
- os.rename(bam_parts[0], accepted_hits+".bam")
+ move(bam_parts[0], accepted_hits+".bam")
if not params.report_params.convert_bam:
#just convert to .sam
bam2sam_cmd = [samtools_path, "view", "-h", accepted_hits+".bam"]
@@ -2827,7 +2834,7 @@ def compile_reports(params, sam_header_filename, ref_fasta, mappings, readfiles,
if len(um_parts) > 0:
if len(um_parts)==1:
- os.rename(um_parts[0], um_merged)
+ move(um_parts[0], um_merged)
else:
merge_cmd=[prog_path("bam_merge"), "-Q",
"--sam-header", sam_header_filename, um_merged]
diff --git a/src/tophat_reports.cpp b/src/tophat_reports.cpp
index 43d1a2e..5a0afff 100644
--- a/src/tophat_reports.cpp
+++ b/src/tophat_reports.cpp
@@ -2196,17 +2196,17 @@ struct CReadProc: public GetReadProc {
GetReadProc(bamw, um_counter, mm_counter, u_um_counter, u_mm_counter) {}
virtual bool process(QReadData& rdata, bool& found) { //, bool is_unmapped) {
//if (is_unmapped || (rdata.trashCode!='M' && !found)) {
- if (rdata.trashCode!='M' && !found) {
+ if (rdata->trashCode!='M' && !found) {
this->writeUnmapped(rdata);
}
//
if (unmapped_counter && !found) {
- if (rdata.trashCode!='M') {
- if (rdata.matenum) (*unmapped_counter)++;
+ if (rdata->trashCode!='M') {
+ if (rdata->matenum) (*unmapped_counter)++;
else if (u_unmapped_counter) (*u_unmapped_counter)++;
}
else if (multimapped_counter) {
- if (rdata.matenum) (*multimapped_counter)++;
+ if (rdata->matenum) (*multimapped_counter)++;
else if (u_multimapped_counter) (*u_multimapped_counter)++;
}
}
@@ -2226,7 +2226,7 @@ struct ReportWorker {
HitsForRead& curr_hit_group, ReadStream& reads_file,
GBamWriter& bam_writer, FragmentType fragment_type,
GetReadProc* readProc=NULL,
- QReadData* gotRead=NULL) {
+ QReadData gotRead=QReadDataValue::Null) {
int64_t* unmapped_counter = & alnStats->num_unmapped_left;
int64_t* aligned_counter = & alnStats->num_aligned_left;
int64_t* aligned_counter_multi = & alnStats->num_aligned_left_multi;
@@ -2236,7 +2236,7 @@ struct ReportWorker {
if (gotRead==NULL) {
if (reads_file.getQRead(curr_obs_order, read,
begin_id, end_id, readProc))
- gotRead=&read;
+ gotRead=read;
}
if (gotRead==NULL) {
//Should never happen!
@@ -2270,7 +2270,7 @@ struct ReportWorker {
}
}
*/
- if (readProc) readProc->writeUnmapped(*gotRead);
+ if (readProc) readProc->writeUnmapped(gotRead);
(*unmapped_counter)++;
return;
}
@@ -2299,7 +2299,7 @@ struct ReportWorker {
if (!gotRead->um_written)
(*unmapped_counter)++;
if (readProc)
- readProc->writeUnmapped(*gotRead);
+ readProc->writeUnmapped(gotRead);
}
if (best_hits.hits.size() > 0) {
@@ -2313,7 +2313,7 @@ struct ReportWorker {
}
}
else {
- readProc->writeUnmapped(*gotRead);
+ readProc->writeUnmapped(gotRead);
}
}
@@ -2517,9 +2517,9 @@ struct ReportWorker {
pair_support(best_hits, *final_fusions, *fusions);
print_sam_for_pair(*rt, best_hits, grade, bam_writer,
- l_read.read.alt_name, r_read.read.alt_name, rng, begin_id, end_id);
- l_read.um_written=true;
- r_read.um_written=true;
+ l_read->read.alt_name, r_read->read.alt_name, rng, begin_id, end_id);
+ l_read->um_written=true;
+ r_read->um_written=true;
} /*
else {
fprintf(stderr, "Error: couldn't get reads for pair #%ld (%d, %d)\n",
@@ -2563,7 +2563,7 @@ struct ReportWorker {
write_singleton_alignments(curr_left_obs_order, curr_left_hit_group,
left_reads_file, bam_writer, //*left_um_out,
PE_reads ? FRAG_LEFT : FRAG_UNPAIRED, &l_readProc,
- got_left_read ? &l_read : NULL);
+ got_left_read ? l_read : QReadDataValue::Null);
}
else {
l_readProc.writeUnmapped(l_read);
@@ -2573,7 +2573,7 @@ struct ReportWorker {
if (curr_right_hit_group.hits.size() > 0) { //only right read mapped
write_singleton_alignments(curr_right_obs_order,
curr_right_hit_group, right_reads_file, bam_writer, //*right_um_out,
- FRAG_RIGHT, &r_readProc, got_right_read ? &r_read : NULL);
+ FRAG_RIGHT, &r_readProc, got_right_read ? r_read : QReadDataValue::Null);
} else {
r_readProc.writeUnmapped(r_read);
alnStats->num_unmapped_right++;
@@ -2720,8 +2720,13 @@ void driver(const string& bam_output_fname,
fnames.push_back(left_reads_fname);
fnames.push_back(left_map_fnames.back());
bool enough_data = calculate_offsets(fnames, read_ids, offsets);
- if (!enough_data)
+ if (!enough_data) {
+//debugging:
+#if 0
+ fprintf(stderr, ">>>DEBUG: not enough data, switching to single thread mode\n");
+#endif
num_threads = 1;
+ }
}
vector<JunctionSet> vjunctions(num_threads);
@@ -2769,7 +2774,7 @@ void driver(const string& bam_output_fname,
threads.push_back(new boost::thread(worker));
else
worker();
- }
+ } //for each thread
for (size_t i = 0; i < threads.size(); ++i)
{
--
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