[med-svn] [tophat] 03/03: d/changelog: new upstream version d/patches/fix_includes_path.patch: refresh

[Alex Mestiashvili]

This is an automated email from the git hooks/post-receive script.

malex-guest pushed a commit to branch master
in repository tophat.

commit e872e3fc0f0d9cb0d9462ed0d444dbc893842800
Author: Alexandre Mestiashvili <alex at biotec.tu-dresden.de>
Date:   Wed Mar 25 15:04:46 2015 +0100

    d/changelog: new upstream version
    d/patches/fix_includes_path.patch: refresh
---
 debian/changelog                       | 6 ++++++
 debian/patches/fix_includes_path.patch | 8 ++++----
 2 files changed, 10 insertions(+), 4 deletions(-)

diff --git a/debian/changelog b/debian/changelog
index d260bb1..a2ec064 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -1,3 +1,9 @@
+tophat (2.0.14+dfsg-1) UNRELEASED; urgency=medium
+
+  * Imported Upstream version 2.0.14+dfsg
+
+ -- Alexandre Mestiashvili <alex at biotec.tu-dresden.de>  Wed, 25 Mar 2015 15:03:44 +0100
+
 tophat (2.0.13+dfsg-1) unstable; urgency=medium
 
   [ Andreas Tille ]
diff --git a/debian/patches/fix_includes_path.patch b/debian/patches/fix_includes_path.patch
index d5a4c1f..c6b551a 100644
--- a/debian/patches/fix_includes_path.patch
+++ b/debian/patches/fix_includes_path.patch
@@ -65,12 +65,12 @@ Subject: Corrected location for samtools .h files
  
 --- tophat.orig/configure.ac
 +++ tophat/configure.ac
-@@ -107,7 +107,7 @@
+@@ -105,7 +105,7 @@
  	  
  CFLAGS="${generic_CFLAGS} ${ext_CFLAGS} ${user_CFLAGS} ${debug_CFLAGS}"
  CXXFLAGS="$CFLAGS"
--CXXFLAGS="$CXXFLAGS $BOOST_CPPFLAGS $BAM_CPPFLAGS -I./SeqAn-1.3"
-+CXXFLAGS="$CXXFLAGS $BOOST_CPPFLAGS $BAM_CPPFLAGS"
- LDFLAGS="$BOOST_LDFLAGS $BAM_LDFLAGS $user_LDFLAGS"
+-CXXFLAGS="$CXXFLAGS $BAM_CPPFLAGS $BOOST_CPPFLAGS -I./SeqAn-1.3"
++CXXFLAGS="$CXXFLAGS $BAM_CPPFLAGS $BOOST_CPPFLAGS"
+ LDFLAGS="$BAM_LDFLAGS $BOOST_LDFLAGS $user_LDFLAGS"
  
  AM_INIT_AUTOMAKE([-Wall foreign tar-pax foreign])

-- 
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