Author: tille
Date: 2015-10-30 14:49:55 +0000 (Fri, 30 Oct 2015)
New Revision: 20346
Modified:
trunk/packages/R/r-bioc-000-dependency-scheme/3.2/BioC_3.2-dependency-tree.ditaa
Log:
Reflect dependency changes
Modified: trunk/packages/R/r-bioc-000-dependency-scheme/3.2/BioC_3.2-dependency-tree.ditaa
===================================================================
--- trunk/packages/R/r-bioc-000-dependency-scheme/3.2/BioC_3.2-dependency-tree.ditaa 2015-10-30 14:38:42 UTC (rev 20345)
+++ trunk/packages/R/r-bioc-000-dependency-scheme/3.2/BioC_3.2-dependency-tree.ditaa 2015-10-30 14:49:55 UTC (rev 20346)
@@ -31,40 +31,40 @@
| | makecdfenv | | +-----------+ | +----------+--------+
| +------------+ | +-------------------------------->| shortread |<-------|---------------+ genomicalignments |
| ^ | | +-----------+ | +-------------------+
- | | | | | ^ ^
- | | | | | | |
- | | | | | +---------+-+ |
- | | +-------------------------+ +------------------------------------->| rsamtools | |
- | | | | | | +-----------+ |
-+------+-----+ +-------+--+ | +--+-----+---+ +------------+ +----+----+ | |
-| hypergraph | | affy |<-----------+ | | biostrings | | annotate | | biomart | | |
-+------------+ +----------+ | | +------------+ +------------+ +---------+ | |
- ^ ^ ^ ^ | | ^ ^ ^ | |
- | | | | | | | | | | |
- +---+---+ +----------------+ | ++--------+ | | | +------+--------+ | +----------+----+ |
- | graph | | preprocesscore | | | affyio | | | | | annotationdbi |----+ | genomicranges | |
- +-------+ +----------------+ | +---------+ | | | +---------------+ +---------------+ |
- ^ | | | | ^ ^ ^ ^ |
- | | | | | | | | | |
- | +--------+------+ | | +------------------|-------------+ | | | |
- | | biocinstaller | | | | | | | | |
- | +---------------+ | | | | +----------------------|---------------+ + |
- | | | | | | | +---------+ |
- | | | | | | | | |
- | | | | +---+---+-+ +-+-----------++ |
- | | | | | xvector | | genomeinfodb | |
- | | | | +---------+ +--------------+ |
- | | | | ^ ^ |
- | | | | | | |
- | +----------+ +-+--+--+-+ +---+-----+ | |
- | | multtest |<-------+ biobase | | iranges +-------------------------+ |
- | +----------+ +---------+ +-------+-+ |
- | ^ ^ : |
- | | | : |
- +---------------------------------------------+ | | : |
- | | | v |
- | | +--+--------+ +--------------+ |
- | | +----------------->| s4vectors | | biocparallel +-----------------+
+ | | | | | ^
+ | | | | | |
+ | | | | | +-------+------+
+ | | +-------------------------+ +----------------------------------------->| rsamtools |
+ | | | | | | +--------------+
++------+-----+ +-------+--+ | +--+-----+---+ +------------+ +----+----+ ^ ^
+| hypergraph | | affy |<-----------+ | | biostrings | | annotate | | biomart | | |
++------------+ +----------+ | | +------------+ +------------+ +---------+ | |
+ ^ ^ ^ ^ | | ^ ^ ^ | |
+ | | | | | | | | | | |
+ +---+---+ +----------------+ | ++--------+ | | | +------+--------+ | +----------+----+ |
+ | graph | | preprocesscore | | | affyio | | | | | annotationdbi |----+ | genomicranges | |
+ +-------+ +----------------+ | +---------+ | | | +---------------+ +---------------+ |
+ ^ | | | | ^ ^ ^ ^ |
+ | | | | | | | | | |
+ | +--------+------+ | | +------------------|-------------+ | | | |
+ | | biocinstaller | | | | | | | | |
+ | +---------------+ | | | | +----------------------|---------------+ + |
+ | | | | | | | +---------+ |
+ | | | | | | | | |
+ | | | | +---+---+-+ +-+-----------++ |
+ | | | | | xvector | | genomeinfodb | |
+ | | | | +---------+ +--------------+ |
+ | | | | ^ ^ |
+ | | | | | | |
+ | +----------+ +-+--+--+-+ +---+-----+ | |
+ | | multtest |<-------+ biobase | | iranges +-------------------------+ |
+ | +----------+ +---------+ +-------+-+ |
+ | ^ ^ : |
+ | | | : |
+ +---------------------------------------------+ | | : |
+ | | | v |
+ | | +--+--------+ +--------------+ |
+ | | +----------------->| s4vectors | | biocparallel +---------+
| | | +-----------+ +--------------+
| | | ^
| | | |