[med-svn] r20347 - trunk/packages/R/r-bioc-000-dependency-scheme/3.2

Andreas Tille tille at moszumanska.debian.org
Fri Oct 30 15:21:10 UTC 2015


Author: tille
Date: 2015-10-30 15:21:09 +0000 (Fri, 30 Oct 2015)
New Revision: 20347

Modified:
   trunk/packages/R/r-bioc-000-dependency-scheme/3.2/BioC_3.2-dependency-tree.ditaa
Log:
Add relation for testing


Modified: trunk/packages/R/r-bioc-000-dependency-scheme/3.2/BioC_3.2-dependency-tree.ditaa
===================================================================
--- trunk/packages/R/r-bioc-000-dependency-scheme/3.2/BioC_3.2-dependency-tree.ditaa	2015-10-30 14:49:55 UTC (rev 20346)
+++ trunk/packages/R/r-bioc-000-dependency-scheme/3.2/BioC_3.2-dependency-tree.ditaa	2015-10-30 15:21:09 UTC (rev 20347)
@@ -36,36 +36,36 @@
        |                              |           |      |                                                      |            +-------+------+
        |                              |           +-------------------------+     +----------------------------------------->|   rsamtools  |
        |                              |                  |                  |     |                             |            +--------------+
-+------+-----+                +-------+--+               |               +--+-----+---+    +------------+  +----+----+          ^        ^
-| hypergraph |                |   affy   |<-----------+  |               | biostrings |    |  annotate  |  | biomart |          |        |
-+------------+                +----------+            |  |               +------------+    +------------+  +---------+          |        |
-       ^                       ^  ^   ^               |  |                     ^                  ^             ^               |        |
-       |                       |  |   |               |  |                     |                  |             |               |        |
-   +---+---+  +----------------+  |  ++--------+      |  |                     |           +------+--------+    |    +----------+----+   |
-   | graph |  | preprocesscore |  |  | affyio  |      |  |                     |           | annotationdbi |----+    | genomicranges |   |
-   +-------+  +----------------+  |  +---------+      |  |                     |           +---------------+         +---------------+   |
-       ^                          |                   |  |                     |             ^            ^               ^     ^        |
-       |                          |                   |  |                     |             |            |               |     |        |
-       |                 +--------+------+            |  |  +------------------|-------------+            |               |     |        |
-       |                 | biocinstaller |            |  |  |                  |                          |               |     |        |
-       |                 +---------------+            |  |  |                  |   +----------------------|---------------+     +        |
-       |                                              |  |  |                  |   |                      |           +---------+        |
-       |                                              |  |  |                  |   |                      |           |                  |
-       |                                              |  |  |              +---+---+-+                  +-+-----------++                 |
-       |                                              |  |  |              | xvector |                  | genomeinfodb |                 |
-       |                                              |  |  |              +---------+                  +--------------+                 |
-       |                                              |  |  |                  ^                               ^                         |
-       |                                              |  |  |                  |                               |                         |
-       |                        +----------+        +-+--+--+-+            +---+-----+                         |                         |
-       |                        | multtest |<-------+ biobase |            | iranges +-------------------------+                         |
-       |                        +----------+        +---------+            +-------+-+                                                   |
-       |                                                ^                        ^ :                                                     |
-       |                                                |                        | :                                                     |
-       +---------------------------------------------+  |                        | :                                                     |
-                                                     |  |                        | v                                                     |
-                                                     |  |                     +--+--------+                     +--------------+         |
-                                                     |  |  +----------------->| s4vectors |                     | biocparallel +---------+
-                                                     |  |  |                  +-----------+                     +--------------+           
++------+-----+                +-------+--+               |               +--+-----+---+    +------------+  +----+----+          ^        ^:
+| hypergraph |                |   affy   |<-----------+  |               | biostrings |    |  annotate  |  | biomart |          |        |:
++------------+                +----------+            |  |               +------------+    +------------+  +---------+          |        |:
+       ^                       ^  ^   ^               |  |                     ^                  ^             ^               |        |:
+       |                       |  |   |               |  |                     |                  |             |               |        |:
+   +---+---+  +----------------+  |  ++--------+      |  |                     |           +------+--------+    |    +----------+----+   |:
+   | graph |  | preprocesscore |  |  | affyio  |      |  |                     |           | annotationdbi |----+    | genomicranges |   |:
+   +-------+  +----------------+  |  +---------+      |  |                     |           +---------------+         +---------------+   |:
+       ^                          |                   |  |                     |             ^            ^               ^     ^        |:
+       |                          |                   |  |                     |             |            |               |     |        |:
+       |                 +--------+------+            |  |  +------------------|-------------+            |               |     |        |:
+       |                 | biocinstaller |            |  |  |                  |                          |               |     |        |:
+       |                 +---------------+            |  |  |                  |   +----------------------|---------------+     +        |:
+       |                                              |  |  |                  |   |                      |           +---------+        |:
+       |                                              |  |  |                  |   |                      |           |                  |:
+       |                                              |  |  |              +---+---+-+                  +-+-----------++                 |:
+       |                                              |  |  |              | xvector |                  | genomeinfodb |                 |:
+       |                                              |  |  |              +---------+                  +--------------+                 |:
+       |                                              |  |  |                  ^                               ^                         |:
+       |                                              |  |  |                  |                               |                         |:
+       |                        +----------+        +-+--+--+-+            +---+-----+                         |                         |:
+       |                        | multtest |<-------+ biobase |            | iranges +-------------------------+                         |:
+       |                        +----------+        +---------+            +-------+-+                                                   |:
+       |                                                ^                        ^ :                                                     |:
+       |                                                |                        | :                                                     |:
+       +---------------------------------------------+  |                        | :                                                     |:
+                                                     |  |                        | v                                                     |:
+                                                     |  |                     +--+--------+                     +--------------+         |:
+                                                     |  |  +----------------->| s4vectors |                     | biocparallel +---------+:
+                                                     |  |  |                  +-----------+                     +--------------+<---------+ 
                                                      |  |  |                                                           ^                   
                                                      |  |  |                                                           |                   
                                                      |  |  |   +-------------------------------------------------------+                   




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