[med-svn] r20367 - trunk/packages/R/r-bioc-000-dependency-scheme/3.2

Andreas Tille tille at moszumanska.debian.org
Sat Oct 31 19:01:26 UTC 2015


Author: tille
Date: 2015-10-31 19:01:25 +0000 (Sat, 31 Oct 2015)
New Revision: 20367

Modified:
   trunk/packages/R/r-bioc-000-dependency-scheme/3.2/BioC_3.2-dependency-tree.ditaa
Log:
Change formating to prepare adding new dependency SumarizedExperiment


Modified: trunk/packages/R/r-bioc-000-dependency-scheme/3.2/BioC_3.2-dependency-tree.ditaa
===================================================================
--- trunk/packages/R/r-bioc-000-dependency-scheme/3.2/BioC_3.2-dependency-tree.ditaa	2015-10-31 18:30:15 UTC (rev 20366)
+++ trunk/packages/R/r-bioc-000-dependency-scheme/3.2/BioC_3.2-dependency-tree.ditaa	2015-10-31 19:01:25 UTC (rev 20367)
@@ -36,17 +36,17 @@
        |                              |           |      |                                                      |            +-------+------+
        |                              |           +-------------------------+     +----------------------------------------->|   rsamtools  |
        |                              |                  |                  |     |                             |            +--------------+
-+------+-----+                +-------+--+               |               +--+-----+---+    +------------+  +----+----+          ^        ^:
-| hypergraph |                |   affy   |<-----------+  |               | biostrings |    |  annotate  |  | biomart |          |        |:
-+------------+                +----------+            |  |               +------------+    +------------+  +---------+          |        |:
-       ^                       ^  ^   ^               |  |                     ^                  ^             ^               |        |:
-       |                       |  |   |               |  |                     |                  |             |               |        |:
-   +---+---+  +----------------+  |  ++--------+      |  |                     |           +------+--------+    |    +----------+----+   |:
-   | graph |  | preprocesscore |  |  | affyio  |      |  |                     |           | annotationdbi |----+    | genomicranges |   |:
-   +-------+  +----------------+  |  +---------+      |  |                     |           +---------------+         +---------------+   |:
-       ^                          |                   |  |                     |             ^            ^               ^     ^        |:
-       |                          |                   |  |                     |             |            |               |     |        |:
-       |                 +--------+------+            |  |  +------------------|-------------+            |               |     |        |:
++------+-----+                +-------+--+               |               +--+-----+---+  +------------+  +------+--+            ^        ^:
+| hypergraph |                |   affy   |<-----------+  |               | biostrings |  |  annotate  |  | biomart |            |        |:
++------------+                +----------+            |  |               +------------+  +------------+  +---------+            |        |:
+       ^                       ^  ^   ^               |  |                     ^                  ^          ^                  |        |:
+       |                       |  |   |               |  |                     |                  |          |                  |        |:
+   +---+---+  +----------------+  |  ++--------+      |  |                     |               +--+----------+-+     +----------+----+   |:
+   | graph |  | preprocesscore |  |  | affyio  |      |  |                     |               | annotationdbi |     | genomicranges |   |:
+   +-------+  +----------------+  |  +---------+      |  |                     |               +---------------+     +---------------+   |:
+       ^                          |                   |  |                     |                 ^        ^               ^     ^        |:
+       |                          |                   |  |                     |                 |        |               |     |        |:
+       |                 +--------+------+            |  |  +------------------|-----------------+        |               |     |        |:
        |                 | biocinstaller |            |  |  |                  |                          |               |     |        |:
        |                 +---------------+            |  |  |                  |   +----------------------|---------------+     +        |:
        |                                              |  |  |                  |   |                      |           +---------+        |:
@@ -56,15 +56,15 @@
        |                                              |  |  |              +---------+                  +--------------+                 |:
        |                                              |  |  |                  ^                               ^                         |:
        |                                              |  |  |                  |                               |                         |:
-       |                        +----------+        +-+--+--+-+            +---+-----+                         |                         |:
-       |                        | multtest |<-------+ biobase |            | iranges +-------------------------+                         |:
-       |                        +----------+        +---------+            +-------+-+                                                   |:
-       |                                                ^                        ^ :                                                     |:
-       |                                                |                        | :                                                     |:
-       +---------------------------------------------+  |                        | :                                                     |:
-                                                     |  |                        | v                                                     |:
-                                                     |  |                     +--+--------+                     +--------------+         |:
-                                                     |  |  +----------------->| s4vectors |                     | biocparallel +---------+:
+       |                        +----------+          |  |  |              +---+-----+                         |                         |:
+       |                        | multtest |          |  |  |              | iranges +-------------------------+                         |:
+       |                        +----------+          |  |  |              +-------+-+                                                   |:
+       |                             ^                |  |  |                    ^ :                                                     |:
+       |                             |              +-+--+--+-+                  | :                                                     |:
+       |                             +--------------+ biobase |                  | :                                                     |:
+       |                                            +---------+                  | v                                                     |:
+       |                                                ^                     +--+--------+                     +--------------+         |:
+       +---------------------------------------------+  |  +----------------->| s4vectors |                     | biocparallel +---------+:
                                                      |  |  |                  +-----------+                     +--------------+<---------+ 
                                                      |  |  |                                                           ^                   
                                                      |  |  |                                                           |                   




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