[med-svn] [python-cobra] 01/01: Merge tag 'debian/0.5.6-1' into debian/jessie-backports

[Afif Elghraoui]

This is an automated email from the git hooks/post-receive script.

afif pushed a commit to branch debian/jessie-backports
in repository python-cobra.

commit 8701ba9af2d094e689ca109e3ffdc668bea2d7c8
Merge: 51a5ae5 6f42cc5
Author: Afif Elghraoui <afif at debian.org>
Date:   Mon Dec 5 21:48:28 2016 -0800

    Merge tag 'debian/0.5.6-1' into debian/jessie-backports
    
    tagging package python-cobra version debian/0.5.6-1

 .gitignore                                         |   3 +
 .travis.yml                                        |  96 ++-
 CONTRIBUTING.rst                                   |  44 +-
 appveyor.yml                                       |   5 +-
 cobra/VERSION                                      |   2 +-
 cobra/core/DictList.py                             |   2 +-
 cobra/core/Model.py                                |  17 +-
 cobra/core/Reaction.py                             |   3 +
 cobra/flux_analysis/parsimonious.py                |   4 +-
 cobra/io/__init__.py                               |  12 +-
 cobra/io/json.py                                   | 129 ++--
 cobra/test/__init__.py                             |  54 +-
 cobra/test/conftest.py                             |  48 ++
 cobra/test/design.py                               |  89 ---
 cobra/test/io_tests.py                             | 261 -------
 cobra/test/solvers.py                              | 292 --------
 cobra/test/test_design.py                          |  60 ++
 cobra/test/test_dictlist.py                        | 257 +++++++
 .../{flux_analysis.py => test_flux_analysis.py}    | 415 ++++++-----
 cobra/test/test_io.py                              | 213 ++++++
 .../test/{manipulation.py => test_manipulation.py} | 231 +++---
 cobra/test/test_model.py                           | 597 +++++++++++++++
 cobra/test/test_solvers.py                         | 266 +++++++
 cobra/test/unit_tests.py                           | 806 ---------------------
 config.sh                                          |  33 +-
 debian/changelog                                   |  10 +
 debian/control                                     |   2 +
 debian/patches/exclude-pytest-benchmark.patch      | 248 +++++++
 debian/patches/series                              |   1 +
 debian/tests/Makefile                              |   2 +-
 debian/tests/control                               |   2 +
 develop-requirements.txt                           |   1 +
 documentation_builder/conf.py                      |   2 +-
 scripts/deploy-test.sh                             |  15 -
 scripts/deploy.sh                                  |   9 +-
 tox.ini                                            |   2 +-
 36 files changed, 2254 insertions(+), 1979 deletions(-)

diff --cc debian/changelog
index 922caa2,ab80872..8e230ff
--- a/debian/changelog
+++ b/debian/changelog
@@@ -1,9 -1,13 +1,19 @@@
+ python-cobra (0.5.6-1) unstable; urgency=medium
+ 
+   * Imported Upstream version 0.5.6
+   * Update packaging to accommodate change in test suite framework
+     - include a workaround for #846045 (in pytest-benchmark) to be able
+       to run tests without pytest-benchmark available.
+   * d/tests/Makefile: update test script to accommodate return code change
+ 
+  -- Afif Elghraoui <afif at debian.org>  Tue, 29 Nov 2016 03:12:24 -0800
+ 
 +python-cobra (0.5.4-1~bpo8+1) jessie-backports; urgency=medium
 +
 +  * Rebuild for jessie-backports.
 +
 + -- Afif Elghraoui <afif at debian.org>  Fri, 18 Nov 2016 21:54:14 -0800
 +
  python-cobra (0.5.4-1) unstable; urgency=medium
  
    * Imported Upstream version 0.5.4

-- 
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