[med-svn] [metabit] 01/01: Update dependencies and todo
Andreas Tille
tille at debian.org
Thu Jul 28 13:06:24 UTC 2016
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tille pushed a commit to branch master
in repository metabit.
commit 6b9dc5756a2bbc687c421945a667e1ad45e4da6b
Author: Andreas Tille <tille at debian.org>
Date: Thu Jul 28 15:05:54 2016 +0200
Update dependencies and todo
---
debian/changelog | 4 ++--
debian/control | 4 +++-
2 files changed, 5 insertions(+), 3 deletions(-)
diff --git a/debian/changelog b/debian/changelog
index f076172..f770981 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -4,7 +4,7 @@ metabit (0.0+20160617-1) UNRELEASED; urgency=medium
TODO:
https://anonscm.debian.org/git/debian-med/python-lefse.git
- https://github.com/marbl/Krona (see also https://github.com/marbl/Krona/wiki)
-
+ https://github.com/MikkelSchubert/adapterremoval
+ https://ginolhac.github.io/mapDamage/
-- Andreas Tille <tille at debian.org> Mon, 25 Jul 2016 14:09:29 +0200
diff --git a/debian/control b/debian/control
index afd6777..5ab713b 100644
--- a/debian/control
+++ b/debian/control
@@ -23,7 +23,9 @@ Depends: ${python:Depends},
python-pysam,
libpicard-java (>= 2.1.1+dfsg-1) | picard-tools (<= 1.113-1),
samtools,
- kronatools
+ kronatools,
+ bedtools,
+ mafft
Description: analysing microbial profiles from high-throughput sequencing shotgun data
MetaBIT is an integrative and automated metagenomic pipeline for
analysing microbial profiles from high-throughput sequencing
--
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