[med-svn] [falconkit] 02/03: Add manpage corresponding to new interface

[Afif Elghraoui]

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afif pushed a commit to branch master
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commit d9f6c49e511a5ba9b14bf7ec02abaa9d3bafb9f0
Author: Afif Elghraoui <afif at ghraoui.name>
Date:   Tue Mar 8 23:58:16 2016 -0800

    Add manpage corresponding to new interface
---
 debian/falconkit.1 | 34 ++++++++++++++++------------------
 1 file changed, 16 insertions(+), 18 deletions(-)

diff --git a/debian/falconkit.1 b/debian/falconkit.1
index b1571dc..9f9d060 100644
--- a/debian/falconkit.1
+++ b/debian/falconkit.1
@@ -1,38 +1,36 @@
-.TH FALCONKIT 1 "December 2015" 0.1.3
+.TH FALCONKIT 1 "December 2015"
 .SH NAME
 falconkit \- genome assembly toolkit
 .PP
-falcon_asm \- assemble a contig using overlapping information
+falcontask
 .br
-falcon_asm_dev
+fc_actg_coordinate
 .br
-falcon_dedup
+fc_consensus \- simple multi-processor consensus sequence generator
 .br
-falcon_fixasm \- break contigs on potential misassembly points
+fc_contig_annotate
 .br
-falcon_overlap
+fc_ctg_link_analysis
 .br
-falcon_overlap2
+fc_dedup_a_tigs
 .br
-falcon_qrm \- simple multi-processor overlapper for sequence reads
+fc_graph_to_contig
 .br
-falcon_sense \- simple multi-processor consensus sequence generator
+fc_graph_to_utgs
 .br
-falcon_ucns_data
+fc_ovlp_filter \- simple multi-process LAS overlap data filter
 .br
-falcon_utgcns
+fc_ovlp_stats \- simple multi-process LAS overlap data filter
 .br
-get_rdata 
-.br
-remove_dup_ctg \- remove duplicate contigs
+fc_ovlp_to_graph
 .SH DESCRIPTION
-Falcon is a set of tools for fast aligning long reads for consensus and
-assembly. It is a simple code collection for efficient assembly of
-haploid and diploid genomes.
+\fBfalcon\fP is a program that...
 .SH OPTIONS
 A summary of options is included below.
 For a complete description, see the programs' individual help menus
-or the documentation in /usr/share/doc/falconkit/
+or the online documentation.
 .TP
 .B \-h, \-\-help
 Show summary of options.
+.SH SEE ALSO
+https://github.com/PacificBiosciences/FALCON/wiki/Manual

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