[med-svn] [vsearch] 02/04: Merge tag 'upstream/1.10.1'

[Andreas Tille]

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tille pushed a commit to branch master
in repository vsearch.

commit 09125b24b2e7eaee4f3584d9cc7225ce59e156f6
Merge: 8488925 b2a6636
Author: Andreas Tille <tille at debian.org>
Date:   Thu Mar 10 23:21:45 2016 +0100

    Merge tag 'upstream/1.10.1'
    
    Upstream version 1.10.1

 README.md                  |    9 +-
 configure                  |   20 +-
 configure.ac               |    2 +-
 man/vsearch.1              |  171 +-
 src/Makefile.am            |    5 +-
 src/Makefile.in            |   22 +-
 src/chimera.cc             |  135 +-
 src/eestats.cc             |  337 +++
 src/{fasta.h => eestats.h} |   85 +-
 src/fasta.cc               |   84 +-
 src/fasta.h                |   11 +
 src/fastq.cc               |    9 +-
 src/mask.cc                |    4 +
 src/mergepairs.cc          |  933 +++++----
 src/msa.cc                 |   71 +-
 src/pvalue.h               | 4843 --------------------------------------------
 src/{fasta.h => rerep.cc}  |  131 +-
 src/{fasta.h => rerep.h}   |   85 +-
 src/util.cc                |   25 +-
 src/vsearch.cc             |  242 ++-
 src/vsearch.h              |   13 +-
 21 files changed, 1419 insertions(+), 5818 deletions(-)

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