[med-svn] [roary] 02/02: ensure consistent sorting of expected file list

[Sascha Steinbiss]

This is an automated email from the git hooks/post-receive script.

sascha-guest pushed a commit to branch master
in repository roary.

commit 96f6e8dedeee68523995e502ef9549a6e27b51ad
Author: Sascha Steinbiss <sascha at steinbiss.name>
Date:   Fri Mar 11 11:55:42 2016 +0000

    ensure consistent sorting of expected file list
---
 debian/tests/expected_files.out | 24 ++++++++++++------------
 debian/tests/test-installed     |  2 +-
 2 files changed, 13 insertions(+), 13 deletions(-)

diff --git a/debian/tests/expected_files.out b/debian/tests/expected_files.out
index 8ecff77..4d38937 100644
--- a/debian/tests/expected_files.out
+++ b/debian/tests/expected_files.out
@@ -1,18 +1,18 @@
 out
-out/gene_presence_absence.csv
-out/core_accessory.tab
-out/clustered_proteins
-out/number_of_new_genes.Rtab
-out/core_accessory_graph.dot
-out/summary_statistics.txt
 out/accessory.header.embl
 out/accessory.tab
-out/number_of_unique_genes.Rtab
-out/number_of_genes_in_pan_genome.Rtab
+out/accessory_binary_genes.fa
+out/accessory_binary_genes.fa.newick
+out/accessory_graph.dot
+out/blast_identity_frequency.Rtab
+out/clustered_proteins
 out/core_accessory.header.embl
+out/core_accessory.tab
+out/core_accessory_graph.dot
 out/gene_presence_absence.Rtab
+out/gene_presence_absence.csv
 out/number_of_conserved_genes.Rtab
-out/accessory_graph.dot
-out/blast_identity_frequency.Rtab
-out/accessory_binary_genes.fa.newick
-out/accessory_binary_genes.fa
+out/number_of_genes_in_pan_genome.Rtab
+out/number_of_new_genes.Rtab
+out/number_of_unique_genes.Rtab
+out/summary_statistics.txt
diff --git a/debian/tests/test-installed b/debian/tests/test-installed
index b374bb0..c592295 100755
--- a/debian/tests/test-installed
+++ b/debian/tests/test-installed
@@ -15,4 +15,4 @@ roary -f out *.gff
 
 [ -d out ]
 
-find out | diff - $ORIGDIR/debian/tests/expected_files.out
+find out | LC_ALL=C sort | diff - $ORIGDIR/debian/tests/expected_files.out

-- 
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