[med-svn] [spades] 01/01: Merge tag 'debian/3.7.1+dfsg-2' into debian/jessie-backports

[Afif Elghraoui]

This is an automated email from the git hooks/post-receive script.

afif pushed a commit to branch debian/jessie-backports
in repository spades.

commit b0af814031643acda14e8ac5f89af26ff269d1b1
Merge: 3ed95e9 3bdfebf
Author: Afif Elghraoui <afif at ghraoui.name>
Date:   Fri Mar 25 21:58:47 2016 -0700

    Merge tag 'debian/3.7.1+dfsg-2' into debian/jessie-backports
    
    spades (3.7.1+dfsg-2) unstable; urgency=medium
    
      [ Sascha Steinbiss ]
      * Use asciidoctor instead of ronn for reproducible man pages
      * enable full hardening
      * add override for pedantic Lintian msg
      * use correct YAML module
        Closes: #818584
    
      [ Afif Elghraoui ]
      * Replace patch with a sed command to fix python-yaml imports

 VERSION                                            |   2 +-
 changelog.html                                     |  14 ++-
 configs/debruijn/coverage_based_rr.info            |  13 ---
 debian/changelog                                   |  21 +++++
 debian/control                                     |   4 +-
 debian/copyright                                   |   2 +-
 debian/gbp.conf                                    |   2 +
 .../man_src/{dipspades.1.ronn => dipspades.1.adoc} | 101 ++++++++++----------
 debian/man_src/{spades.1.ronn => spades.1.adoc}    | 103 +++++++++++----------
 .../man_src/{truspades.1.ronn => truspades.1.adoc} |  27 +++---
 .../0001_use_debian_packaged_python-yaml.patch     |  76 ---------------
 debian/patches/0003_accept-system-bwa.patch        |  12 +--
 .../0101_cmake_ignore_removed_python-yaml.patch    |   4 +-
 .../0102_cmake_ignore_removed_python-joblib.patch  |   4 +-
 debian/patches/0103_use-debian-packaged-bwa.patch  |   4 +-
 debian/patches/0110_build_single_thread.patch      |   4 +-
 debian/patches/0111_use_full_config_dirs.patch     |  16 ++--
 debian/patches/0112_spelling.patch                 |  16 ++--
 debian/patches/0113_adjust_paths.patch             |   8 +-
 debian/patches/0114_use_debian_provided_libs.patch |  20 ++--
 debian/patches/series                              |   1 -
 debian/rules                                       |   8 +-
 debian/source.lintian-overrides                    |   2 +
 ext/include/city/citycrc.h                         |   2 +-
 ext/src/cityhash/city.cc                           |   2 +-
 manual.html                                        |  38 ++++----
 src/cmake/pack.cmake                               |   4 +-
 src/corrector/dataset_processor.cpp                |  46 +--------
 28 files changed, 237 insertions(+), 319 deletions(-)

diff --cc debian/changelog
index 38c6495,258562a..b99044c
--- a/debian/changelog
+++ b/debian/changelog
@@@ -1,9 -1,24 +1,30 @@@
+ spades (3.7.1+dfsg-2) unstable; urgency=medium
+ 
+   [ Sascha Steinbiss ]
+   * Use asciidoctor instead of ronn for reproducible man pages
+   * enable full hardening
+   * add override for pedantic Lintian msg
+   * use correct YAML module
+     Closes: #818584
+ 
+   [ Afif Elghraoui ]
+   * Replace patch with a sed command to fix python-yaml imports
+ 
+  -- Sascha Steinbiss <sascha at steinbiss.name>  Fri, 18 Mar 2016 14:25:06 +0000
+ 
+ spades (3.7.1+dfsg-1) unstable; urgency=medium
+ 
+   * New upstream release.
+   * Add gbp.conf to always use pristine-tar.
+ 
+  -- Sascha Steinbiss <sascha at steinbiss.name>  Sat, 12 Mar 2016 07:23:31 +0000
+ 
 +spades (3.7.0+dfsg-1~bpo8+1) jessie-backports; urgency=medium
 +
 +  * Rebuild for jessie-backports.
 +
 + -- Afif Elghraoui <afif at debian.org>  Sat, 05 Mar 2016 21:08:30 -0800
 +
  spades (3.7.0+dfsg-1) unstable; urgency=medium
  
    * Make changelog building reproducible.

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