[med-svn] [iva] 05/07: fix dependencies, e.g. Java

Sascha Steinbiss sascha at steinbiss.name
Wed May 4 10:19:12 UTC 2016


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sascha-guest pushed a commit to branch master
in repository iva.

commit bb5a1109fe648f277a64bdd8f618d6c498c0d669
Author: Sascha Steinbiss <sascha at steinbiss.name>
Date:   Wed May 4 10:18:35 2016 +0000

    fix dependencies, e.g. Java
---
 debian/control | 9 +++++----
 1 file changed, 5 insertions(+), 4 deletions(-)

diff --git a/debian/control b/debian/control
index e0b30e2..fc43739 100644
--- a/debian/control
+++ b/debian/control
@@ -20,8 +20,8 @@ Build-Depends: debhelper (>= 9),
                python3-pysam,
                samtools,
                smalt,
-               trimmomatic
-Standards-Version: 3.9.6
+               default-jdk-headless
+Standards-Version: 3.9.8
 Vcs-Browser: https://anonscm.debian.org/cgit/debian-med/iva.git
 Homepage: https://github.com/sanger-pathogens/iva
 
@@ -36,11 +36,12 @@ Depends: ${misc:Depends},
          samtools,
          python3-numpy,
          python3-networkx,
-         python3-pysam
+         python3-pysam,
+         default-jre-headless
 Recommends: r-base-core,
             bioperl,
             trimmomatic
-Description: iterative virus assembler
+Description: iterative virus sequence assembler
  IVA is a de novo assembler designed to assemble
  virus genomes that have no repeat sequences,
  using Illumina read pairs sequenced from mixed

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