[med-svn] [ruby-rgfa] 02/02: add debian dir

Sascha Steinbiss satta at debian.org
Sat Sep 24 20:56:14 UTC 2016


This is an automated email from the git hooks/post-receive script.

satta pushed a commit to branch master
in repository ruby-rgfa.

commit 36fae676aa449ecf39bb733df6785e6cbe8833e8
Author: Sascha Steinbiss <satta at debian.org>
Date:   Sat Sep 24 20:55:34 2016 +0000

    add debian dir
---
 debian/changelog     |  5 +++++
 debian/compat        |  1 +
 debian/control       | 33 +++++++++++++++++++++++++++++++++
 debian/copyright     | 27 +++++++++++++++++++++++++++
 debian/rules         |  6 ++++++
 debian/source/format |  1 +
 debian/watch         |  4 ++++
 7 files changed, 77 insertions(+)

diff --git a/debian/changelog b/debian/changelog
new file mode 100644
index 0000000..c9eb4f9
--- /dev/null
+++ b/debian/changelog
@@ -0,0 +1,5 @@
+ruby-rgfa (1.2-1) UNRELEASED; urgency=medium
+
+  * Initial release (Closes: #nnnn)
+
+ -- Sascha Steinbiss <satta at debian.org>  Sat, 24 Sep 2016 09:02:01 +0000
diff --git a/debian/compat b/debian/compat
new file mode 100644
index 0000000..ec63514
--- /dev/null
+++ b/debian/compat
@@ -0,0 +1 @@
+9
diff --git a/debian/control b/debian/control
new file mode 100644
index 0000000..b0ba513
--- /dev/null
+++ b/debian/control
@@ -0,0 +1,33 @@
+Source: ruby-rgfa
+Section: science
+Priority: optional
+Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
+Uploaders: Sascha Steinbiss <satta at debian.org>
+Build-Depends: debhelper (>= 9~),
+               gem2deb
+Standards-Version: 3.9.8
+Vcs-Git: https://anonscm.debian.org/git/debian-med/ruby-rgfa.git
+Vcs-Browser: https://anonscm.debian.org/cgit/debian-med/ruby-rgfa.git
+Homepage: http://github.com/ggonnella/rgfa
+Testsuite: autopkgtest-pkg-ruby
+XS-Ruby-Versions: all
+
+Package: ruby-rgfa
+Architecture: all
+XB-Ruby-Versions: ${ruby:Versions}
+Depends: ruby | ruby-interpreter,
+         ${misc:Depends},
+         ${shlibs:Depends}
+Description: parse, edit and write GFA format graphs in Ruby
+ The Graphical Fragment Assembly (GFA) format is a proposed file format
+ to describe the product of a sequence assembly process.
+ rgfa implements the proposed specifications for the GFA format
+ described under https://github.com/pmelsted/GFA-spec/blob/master/GFA-spec.md
+ as closely as possible.
+ The library allows one to create an RGFA object from a file in the GFA format
+ or from scratch, to enumerate the graph elements (segments, links,
+ containments, paths and header lines), to traverse the graph (by
+ traversing all links outgoing from or incoming to a segment), to search for
+ elements (e.g. which links connect two segments) and to manipulate the
+ graph (e.g. to eliminate a link or a segment or to duplicate a segment
+ distributing the read counts evenly on the copies).
diff --git a/debian/copyright b/debian/copyright
new file mode 100644
index 0000000..211ecc8
--- /dev/null
+++ b/debian/copyright
@@ -0,0 +1,27 @@
+Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Upstream-Name: rgfa
+Source: http://github.com/ggonnella/rgfa
+Files-Excluded: *.pdf
+
+Files: *
+Copyright: (c) 2016 Giorgio Gonnella and CONTRIBUTORS
+           (c) 2016 Center for Bioinformatics, University of Hamburg
+License: ISC
+
+Files: debian/*
+Copyright: 2016 Sascha Steinbiss <satta at debian.org>
+License: ISC
+Comment: the Debian packaging is licensed under the same terms as the original package.
+
+License: ISC
+ Permission to use, copy, modify, and distribute this software for any
+ purpose with or without fee is hereby granted, provided that the above
+ copyright notice and this permission notice appear in all copies.
+ .
+ THE SOFTWARE IS PROVIDED "AS IS" AND THE AUTHOR DISCLAIMS ALL WARRANTIES
+ WITH REGARD TO THIS SOFTWARE INCLUDING ALL IMPLIED WARRANTIES OF
+ MERCHANTABILITY AND FITNESS. IN NO EVENT SHALL THE AUTHOR BE LIABLE FOR
+ ANY SPECIAL, DIRECT, INDIRECT, OR CONSEQUENTIAL DAMAGES OR ANY DAMAGES
+ WHATSOEVER RESULTING FROM LOSS OF USE, DATA OR PROFITS, WHETHER IN AN
+ ACTION OF CONTRACT, NEGLIGENCE OR OTHER TORTIOUS ACTION, ARISING OUT OF
+ OR IN CONNECTION WITH THE USE OR PERFORMANCE OF THIS SOFTWARE.
diff --git a/debian/rules b/debian/rules
new file mode 100755
index 0000000..3454d59
--- /dev/null
+++ b/debian/rules
@@ -0,0 +1,6 @@
+#!/usr/bin/make -f
+
+export GEM2DEB_TEST_RUNNER = --check-dependencies
+
+%:
+	dh $@ --buildsystem=ruby --with ruby
diff --git a/debian/source/format b/debian/source/format
new file mode 100644
index 0000000..163aaf8
--- /dev/null
+++ b/debian/source/format
@@ -0,0 +1 @@
+3.0 (quilt)
diff --git a/debian/watch b/debian/watch
new file mode 100644
index 0000000..d8fec0e
--- /dev/null
+++ b/debian/watch
@@ -0,0 +1,4 @@
+version=4
+opts=repack,compression=xz \
+https://github.com/ggonnella/rgfa/tags .*/v?(\d.*)\.tar.gz
+

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