[med-svn] [bagpipe] 05/06: Update upstream source from tag 'upstream/2012.02.15'

[Andreas Tille]

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tille pushed a commit to branch master
in repository bagpipe.

commit c0a8cebc7d4aed31134da202b4167d594d3f5c5b
Merge: 37b5a3b d0e2852
Author: Andreas Tille <tille at debian.org>
Date:   Sat Dec 2 09:22:25 2017 +0100

    Update upstream source from tag 'upstream/2012.02.15'
    
    Update to upstream version '2012.02.15'
    with Debian dir cc369caabe94e77e55c7de8fd5f8dc1454feda56

 GNUcopyleft.txt                   |  675 ++++++++++++++++++++++
 bagpipe/bagpipe.pl                |  657 ++++++++++++++++++++++
 bagpipe/lib/Algorithm.pm          |  467 ++++++++++++++++
 bagpipe/lib/Array.pm              | 1111 +++++++++++++++++++++++++++++++++++++
 bagpipe/lib/Array2d.pm            |  214 +++++++
 bagpipe/lib/Assert.pm             |  139 +++++
 bagpipe/lib/CCloneable.pm         |   28 +
 bagpipe/lib/CConfigFile.pm        |  172 ++++++
 bagpipe/lib/CDataFrame.pm         |  920 ++++++++++++++++++++++++++++++
 bagpipe/lib/CRing.pm              |  130 +++++
 bagpipe/lib/Debug.pm              |   68 +++
 bagpipe/lib/FileIoHelper.pm       |  461 +++++++++++++++
 bagpipe/lib/Hash.pm               |  168 ++++++
 bagpipe/lib/NamedArgs.pm          |  113 ++++
 bagpipe/lib/Number.pm             |   34 ++
 bagpipe/lib/StdDefs.pm            |   28 +
 bagpipe/lib/String.pm             |   90 +++
 bagpipe/lib/VarType.pm            |   67 +++
 bagpipe/lib/fitgev.R              |   63 +++
 bagpipe/lib/nullscangenome.R      |   55 ++
 bagpipe/lib/plotscans.R           |  119 ++++
 bagpipe/lib/posboot.R             |   87 +++
 bagpipe/lib/scangenome.R          |   50 ++
 bagpipe/lib/scanloci.R            |   57 ++
 bagpipe/lib/write_nomenu_config.R |   25 +
 25 files changed, 5998 insertions(+)

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