[med-svn] [ngsqctoolkit] 06/08: Update upstream source from tag 'upstream/2.3.3'

[Andreas Tille]

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tille pushed a commit to branch master
in repository ngsqctoolkit.

commit 392d8adf90176298f41f441e01e0d542ba99803b
Merge: 5067075 18f3583
Author: Andreas Tille <tille at debian.org>
Date:   Wed Dec 13 17:09:24 2017 +0100

    Update upstream source from tag 'upstream/2.3.3'
    
    Update to upstream version '2.3.3'
    with Debian dir dc3004300ddfa4fefb1f9150d88c9ce0635388b0

 Format-converter/FastqTo454.pl              |  227 ++
 Format-converter/FastqToFasta.pl            |   87 +
 Format-converter/SangerFastqToIlluFastq.pl  |   88 +
 Format-converter/SolexaFastqToIlluFastq.pl  |   89 +
 NGSQCToolkitv2.3.3_manual.pdf               |  Bin 0 -> 889689 bytes
 QC/454QC.pl                                 | 1572 ++++++++++++++
 QC/454QC_PE.pl                              | 1996 ++++++++++++++++++
 QC/454QC_PRLL.pl                            | 2021 ++++++++++++++++++
 QC/IlluQC.pl                                | 2328 +++++++++++++++++++++
 QC/IlluQC_PRLL.pl                           | 2994 +++++++++++++++++++++++++++
 QC/lib/454PEhtml.pl                         |  384 ++++
 QC/lib/454html.pl                           |  347 ++++
 QC/lib/Fonts/Dustismo_Sans.ttf              |  Bin 0 -> 63040 bytes
 QC/lib/Fonts/LucidaSansDemiBold.ttf         |  Bin 0 -> 317896 bytes
 QC/lib/Parallel/Changes                     |   36 +
 QC/lib/Parallel/ForkManager.pm              |  416 ++++
 QC/lib/Parallel/ForkManager/callback.pl     |   48 +
 QC/lib/Parallel/ForkManager/parallel_get.pl |   17 +
 QC/lib/Parallel/MANIFEST                    |    8 +
 QC/lib/Parallel/Makefile.PL                 |    7 +
 QC/lib/Parallel/TODO                        |    2 +
 QC/lib/Parallel/test.pl                     |   20 +
 QC/lib/html.pl                              |  470 +++++
 QC/lib/main.css                             |   46 +
 QC/lib/version                              |    1 +
 QC/lib/version~                             |    1 +
 Statistics/AvgQuality.pl                    |  108 +
 Statistics/N50Stat.pl                       |  172 ++
 Trimming/AmbiguityFiltering.pl              |  405 ++++
 Trimming/HomopolymerTrimming.pl             |  233 +++
 Trimming/TrimmingReads.pl                   |  446 ++++
 31 files changed, 14569 insertions(+)

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