[med-svn] [plink1.9] branch debian/jessie-backports updated (a945561 -> 541ea54)

Andreas Tille tille at debian.org
Wed Jun 7 12:31:45 UTC 2017


This is an automated email from the git hooks/post-receive script.

tille pushed a change to branch debian/jessie-backports
in repository plink1.9.

      from  a945561   Rebuild for jessie-backports.
      adds  9d95999   Imported Upstream version 1.90~b3.31-160203
      adds  a42e1a4   Imported Upstream version 1.90~b3.36-160416
      adds  ef9b508   Merge tag 'upstream/1.90_b3.36-160416'
      adds  db5e9cc   Update debian/*
      adds  93cde6c   Refresh patch
      adds  4488720   Refresh patches
      adds  25185e7   releasing package plink1.9 version 1.90~b3.36-160416-1
      adds  a1bbea8   Set all hardening options
      adds  4335ca0   Update uscan options
      adds  fb6c79d   Imported Upstream version 1.90~b3.40-160816
      adds  ce4c693   Refresh patches
      adds  3668e5a   Add autopkgtest script as example
      adds  62dfb0c   releasing package plink1.9 version 1.90~b3.40-160816-1
      adds  d7f81c0   Add an upstream patch to fix FTBFS for non-amd64 builds (Closes: #811910)
      adds  2b87be3   More simple rules file
      adds  e81d46e   Upload to unstable
      adds  96d83fa   Install an upstream changelog
      adds  fbbfac2   Imported Upstream version 1.90~b3.40-160816
      adds  96b85b5   Imported Upstream version 1.90~b3.43-161010
      adds  8aa6e00   Merge tag 'upstream/1.90_b3.43-161010'
      adds  b584bf6   Update license of plink1.9 to GPL-3+
      adds  db16830   Refresh patches
      adds  9ca7336   Update changelogs
      adds  7a28525   Remove d/NEWS.Debian, redundant with d/README.Debian
      adds  8bd9bdb   Upload to unstable
      adds  b7402f1   Imported Upstream version 1.90~b3.44-161117
      adds  14ba786   Merge tag 'upstream/1.90_b3.44-161117'
      adds  063a333   Update changelogs
      adds  66176d5   Bump debhelper 10
      adds  dfe8019   Bump watch file v4
      adds  4f51f13   Update patch to config makefile
      adds  0a64ec8   Upload to unstable
      adds  0cc4cbb   Imported Upstream version 1.90~b3.45-170113
      adds  02d65ea   Merge tag 'upstream/1.90_b3.45-170113'
      adds  9fc2cc9   Update d/*changelogs
      adds  b979bc2   Refresh patch
      adds  2c55270   Update d/copyright
      adds  026f950   Finalize d/changelog
       new  93336a8   Merge tag 'debian/1.90_b3.45-170113-1' into debian/jessie-backports
       new  541ea54   Rebuild for jessie-backports

The 2 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.


Summary of changes:
 Makefile                                      |   37 +-
 bgzf.c                                        |    2 +
 debian/NEWS.Debian                            |   35 -
 debian/README.Debian                          |   42 +-
 debian/README.source                          |   11 +
 debian/TODO.Debian                            |    1 -
 debian/changelog                              |   55 +
 debian/compat                                 |    2 +-
 debian/control                                |    6 +-
 debian/copyright                              |   50 +-
 debian/examples                               |    3 +-
 debian/install                                |    1 +
 debian/links                                  |    4 +
 debian/patches/01.Makefile_config.patch       |   80 +
 debian/patches/01_Fix_use_internal_lib.patch  |   63 -
 debian/patches/02_Activate_Stable_Build.patch |    6 +-
 debian/patches/series                         |    2 +-
 debian/rules                                  |   24 +-
 debian/upstream.changelog                     |  277 +
 debian/watch                                  |    4 +-
 pigz.c                                        |   50 +-
 plink.c                                       | 1084 +--
 plink_assoc.c                                 |  583 +-
 plink_assoc.h                                 |   17 +
 plink_calc.c                                  |  438 +-
 plink_cluster.c                               |  153 +-
 plink_cnv.c                                   |  781 +-
 plink_cnv.h                                   |   19 +-
 plink_common.c                                | 1332 ++--
 plink_common.h                                |  577 +-
 plink_data.c                                  | 9893 +++++++++++++------------
 plink_data.h                                  |   21 +-
 plink_dosage.c                                |  214 +-
 plink_dosage.h                                |   17 +
 plink_family.c                                |  289 +-
 plink_family.h                                |   17 +
 plink_filter.c                                |  570 +-
 plink_filter.h                                |   17 +
 plink_first_compile                           |   10 +-
 plink_glm.c                                   |  497 +-
 plink_glm.h                                   |   17 +
 plink_help.c                                  |  196 +-
 plink_help.h                                  |   17 +
 plink_homozyg.c                               |  136 +-
 plink_homozyg.h                               |   17 +
 plink_lasso.c                                 |  302 +-
 plink_lasso.h                                 |   19 +
 plink_ld.c                                    |  999 +--
 plink_ld.h                                    |   51 +-
 plink_matrix.c                                |   37 +-
 plink_matrix.h                                |   24 +
 plink_misc.c                                  | 2760 +++----
 plink_misc.h                                  |   17 +
 plink_perm.c                                  |   43 +-
 plink_perm.h                                  |   17 +
 plink_rserve.c                                |   53 +-
 plink_rserve.h                                |   17 +
 plink_set.c                                   |  703 +-
 plink_set.h                                   |   17 +
 plink_stats.c                                 |   21 +-
 plink_stats.h                                 |   17 +
 61 files changed, 12289 insertions(+), 10475 deletions(-)
 delete mode 100644 debian/NEWS.Debian
 create mode 100644 debian/README.source
 delete mode 100644 debian/TODO.Debian
 create mode 100644 debian/install
 create mode 100644 debian/links
 create mode 100644 debian/patches/01.Makefile_config.patch
 delete mode 100644 debian/patches/01_Fix_use_internal_lib.patch
 create mode 100644 debian/upstream.changelog

-- 
Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/plink1.9.git



More information about the debian-med-commit mailing list