[med-svn] [Git][med-team/sambamba][master] 2 commits: disable assert on i386, to be removed once the new release is out

[Gianfranco Costamagna]

Gianfranco Costamagna pushed to branch master at Debian Med / sambamba


Commits:
70a64c85 by Gianfranco Costamagna at 2018-04-18T12:30:27+02:00
disable assert on i386, to be removed once the new release is out

- - - - -
2109b2c6 by Gianfranco Costamagna at 2018-04-18T12:37:46+02:00
Update changelog file

- - - - -


3 changed files:

- debian/changelog
- + debian/patches/disable-assert.patch
- debian/patches/series


Changes:

=====================================
debian/changelog
=====================================
--- a/debian/changelog
+++ b/debian/changelog
@@ -1,3 +1,26 @@
+sambamba (0.6.7-2) unstable; urgency=medium
+
+  * Team upload.
+  * Disable assert on i386, this is a new assert, but the current
+    package is already broken on i386.
+    Upstream is working on a proper fix, in the meantime we can let
+    the package migrate without removing i386 or making things worse
+    for this architecture. Closes: #893664
+    See: https://github.com/biod/sambamba/issues/344 (and issue 300)
+
+  [ Steffen Möller ]
+  * Update upstream metadata file
+
+  [ Matthias Klumpp ]
+  * Fail on missing files
+  * Do not force disable of neon on armhf in rules file, already
+    handled by dh-dlang
+
+  [ Andreas Tille ]
+  * Fix typo in metadata file
+
+ -- Gianfranco Costamagna <locutusofborg at debian.org>  Wed, 18 Apr 2018 12:10:12 +0200
+
 sambamba (0.6.7-1) unstable; urgency=medium
 
   [ Steffen Moeller ]


=====================================
debian/patches/disable-assert.patch
=====================================
--- /dev/null
+++ b/debian/patches/disable-assert.patch
@@ -0,0 +1,17 @@
+Description: Disable assert started failing on 0583f4940a81166d856b5537a920d12113c86530
+Author: Gianfranco Costamagna <locutusofborg at debian.org>
+
+Bug-Debian: https://bugs.debian.org/893664
+Last-Update: 2018-03-21
+
+--- sambamba-0.6.7.orig/sambamba/markdup.d
++++ sambamba-0.6.7/sambamba/markdup.d
+@@ -606,7 +606,7 @@ struct PairedEndsInfo {
+     }
+ }
+ 
+-static assert(PairedEndsInfo.sizeof == 40);
++// static assert(PairedEndsInfo.sizeof == 40);
+ 
+ bool singleEndInfoComparator(S1, S2)(auto ref S1 s1, auto ref S2 s2) {
+     if (s1.library_id < s2.library_id) return true;


=====================================
debian/patches/series
=====================================
--- a/debian/patches/series
+++ b/debian/patches/series
@@ -1 +1,2 @@
 01_add_meson.patch
+disable-assert.patch



View it on GitLab: https://salsa.debian.org/med-team/sambamba/compare/9484f5e6b7cb08153525cc350a06e8c9718479d1...2109b2c6ea3290070e37843564f79399acfe4cca

---
View it on GitLab: https://salsa.debian.org/med-team/sambamba/compare/9484f5e6b7cb08153525cc350a06e8c9718479d1...2109b2c6ea3290070e37843564f79399acfe4cca
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