[med-svn] [Git][med-team/rna-star][master] 9 commits: New upstream version 2.6.0a+dfsg

[Sascha Steinbiss]

Sascha Steinbiss pushed to branch master at Debian Med / rna-star


Commits:
e608df7f by Sascha Steinbiss at 2018-04-26T10:11:48+02:00
New upstream version 2.6.0a+dfsg
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94ec498c by Sascha Steinbiss at 2018-04-26T10:11:49+02:00
Update upstream source from tag 'upstream/2.6.0a+dfsg'

Update to upstream version '2.6.0a+dfsg'
with Debian dir eb0a234c86f1aaaf9070e093e134dfca1798d3bd
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491ce9b1 by Sascha Steinbiss at 2018-04-26T10:49:29+02:00
new upstream, dh 11

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8f35b6fb by Sascha Steinbiss at 2018-04-26T10:49:44+02:00
bump Standards-Version

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9d97db65 by Sascha Steinbiss at 2018-04-26T10:49:54+02:00
adjust VCS entries

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0d6dff14 by Sascha Steinbiss at 2018-04-26T10:50:13+02:00
update patches

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6a50985c by Sascha Steinbiss at 2018-04-26T10:50:30+02:00
update copyright date

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2057aed7 by Sascha Steinbiss at 2018-04-26T10:50:51+02:00
remove absent files from Files-Excluded

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58bcf9d3 by Sascha Steinbiss at 2018-04-26T10:52:34+02:00
update version number in manpage

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30 changed files:

- CHANGES.md
- README.md
- RELEASEnotes.md
- debian/STAR.1
- debian/changelog
- debian/compat
- debian/control
- debian/copyright
- debian/patches/donotuse_own_htslib.patch
- debian/patches/series
- − debian/patches/spelling.patch
- doc/STARmanual.pdf
- extras/doc-latex/STARmanual.tex
- extras/doc-latex/parametersDefault.tex
- source/BAMbinSortByCoordinate.cpp
- source/BAMbinSortByCoordinate.h
- source/BAMbinSortUnmapped.cpp
- source/BAMbinSortUnmapped.h
- source/BAMfunctions.cpp
- source/BAMoutput.cpp
- source/BAMoutput.h
- source/Chain.cpp
- source/Chain.h
- + source/ChimericAlign.cpp
- + source/ChimericAlign.h
- + source/ChimericAlign_chimericJunctionOutput.cpp
- + source/ChimericAlign_chimericStitching.cpp
- + source/ChimericDetection.cpp
- + source/ChimericDetection.h
- + source/ChimericDetection_chimericDetectionMult.cpp


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/rna-star/compare/afb7e8bac11c7fac826e586756ab12b5325fb16d...58bcf9d3f20545e416d52e58bfaa66922754ab84

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View it on GitLab: https://salsa.debian.org/med-team/rna-star/compare/afb7e8bac11c7fac826e586756ab12b5325fb16d...58bcf9d3f20545e416d52e58bfaa66922754ab84
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