[med-svn] [Git][med-team/cnvkit][upstream] New upstream version 0.9.5

[Andreas Tille]

Andreas Tille pushed to branch upstream at Debian Med / cnvkit


Commits:
8059fff8 by Andreas Tille at 2018-08-13T10:57:39Z
New upstream version 0.9.5
- - - - -


30 changed files:

- .travis.yml
- LICENSE
- README.rst
- cnvlib/_version.py
- cnvlib/autobin.py
- cnvlib/cnary.py
- cnvlib/commands.py
- cnvlib/export.py
- cnvlib/import_rna.py
- cnvlib/reference.py
- cnvlib/rna.py
- cnvlib/segmentation/__init__.py
- cnvlib/segmetrics.py
- cnvlib/smoothing.py
- + cnvlib/ztest.py
- devtools/conda-recipe/meta.yaml
- doc/index.rst
- doc/pipeline.rst
- docker/Dockerfile
- scripts/cnv_annotate.py
- scripts/cnv_expression_correlate.py
- scripts/cnv_ztest.py
- + scripts/snpfilter.sh
- setup.py
- skgenome/gary.py
- skgenome/intersect.py
- skgenome/tabio/__init__.py
- skgenome/tabio/bedio.py
- − skgenome/tabio/simplevcf.py
- + skgenome/tabio/vcfsimple.py


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/cnvkit/commit/8059fff89f675485804be5b4b9495615c051b2f9

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