[med-svn] [Git][med-team/rna-star][master] 4 commits: New upstream version 2.6.1a+dfsg

[Sascha Steinbiss]

Sascha Steinbiss pushed to branch master at Debian Med / rna-star


Commits:
ecb17f91 by Sascha Steinbiss at 2018-08-18T14:13:42Z
New upstream version 2.6.1a+dfsg
- - - - -
018a455c by Sascha Steinbiss at 2018-08-18T14:13:43Z
Merge tag 'upstream/2.6.1a+dfsg'

Upstream version 2.6.1a+dfsg

- - - - -
1870aaca by Sascha Steinbiss at 2018-08-18T14:33:53Z
new upstream release

- - - - -
9439fd44 by Sascha Steinbiss at 2018-08-18T14:34:04Z
fix spelling

- - - - -


30 changed files:

- CHANGES.md
- README.md
- debian/changelog
- debian/patches/series
- + debian/patches/spelling.patch
- doc/STARmanual.pdf
- extras/doc-latex/STARmanual.tex
- extras/doc-latex/parametersDefault.tex
- extras/scripts/filterCirc.awk
- + extras/scripts/mergeGeneCounts.awk
- extras/scripts/sjFromSAMcollapseUandM.awk
- extras/scripts/sjFromSAMcollapseUandM_inclOverlaps.awk
- source/BAMbinSortByCoordinate.cpp
- source/BAMbinSortUnmapped.cpp
- source/Genome.cpp
- source/Genome.h
- source/Genome_genomeGenerate.cpp
- source/InOutStreams.cpp
- source/Parameters.cpp
- source/ParametersChimeric.h
- source/Parameters_readSAMheader.cpp
- source/ReadAlignChunk_processChunks.cpp
- source/ReadAlign_peOverlapMergeMap.cpp
- source/STAR.cpp
- source/SequenceFuns.cpp
- source/SequenceFuns.h
- source/Stats.cpp
- source/Stats.h
- source/Transcript_alignScore.cpp
- source/VERSION


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/rna-star/compare/25aa49c508a3d437628004c7b97283f588f63e2f...9439fd444807a6452afafb8af86704ad69628a4e

-- 
View it on GitLab: https://salsa.debian.org/med-team/rna-star/compare/25aa49c508a3d437628004c7b97283f588f63e2f...9439fd444807a6452afafb8af86704ad69628a4e
You're receiving this email because of your account on salsa.debian.org.
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://alioth-lists.debian.net/pipermail/debian-med-commit/attachments/20180818/79085bd6/attachment-0001.html>