[med-svn] [Git][med-team/seqan2][master] 2 commits: generation of CWL descriptions does not work and was deactivated for the moment

[Andreas Tille]

Andreas Tille pushed to branch master at Debian Med / seqan2


Commits:
b04acc57 by Andreas Tille at 2018-12-05T10:35:35Z
generation of CWL descriptions does not work and was deactivated for the moment

- - - - -
2f92c8c9 by Andreas Tille at 2018-12-05T12:33:54Z
Upload to unstable

- - - - -


2 changed files:

- debian/changelog
- debian/rules


Changes:

=====================================
debian/changelog
=====================================
@@ -1,8 +1,10 @@
-seqan2 (2.4.0+dfsg-9) UNRELEASED; urgency=medium
+seqan2 (2.4.0+dfsg-9) unstable; urgency=medium
 
   [ Michael R. Crusoe ]
   * Generate the CWL descriptions automatically, now that CTDConverter is
     packaged.
+    (This does not work and was deactivated in favour of fixing bug #892223
+     quickly.)
 
   [ Steve Langasek ]
   * use alignment-safe buffer handling
@@ -17,9 +19,8 @@ seqan2 (2.4.0+dfsg-9) UNRELEASED; urgency=medium
     automatically installed.  This should not be necessary and should
     be removed in next revision.)
   * debian/rules: Fix PATH in attempt to create CWL descriptions
-  TODO: Fix generation of CWL descriptions
 
- -- Andreas Tille <tille at debian.org>  Tue, 04 Dec 2018 11:19:05 +0100
+ -- Andreas Tille <tille at debian.org>  Wed, 05 Dec 2018 11:36:39 +0100
 
 seqan2 (2.4.0+dfsg-8) unstable; urgency=medium
 


=====================================
debian/rules
=====================================
@@ -78,14 +78,14 @@ override_dh_install-arch:
 	find $(CURDIR)/debian/$(pkgapps) -type f -name LICENSE -delete || /bin/true
 	find $(CURDIR)/debian/$(pkgapps)/usr/lib/seqan/bin -type f \
 		-name "*.sh" | xargs chmod a+x
-	for app in $$(ls $(CURDIR)/debian/$(pkgapps)/usr/lib/seqan/bin); \
-		do $(CURDIR)/debian/$(pkgapps)/usr/lib/seqan/bin/$${app} \
-		--write-ctd $${app}.ctd && CTDConverter cwl -i $${app}.ctd \
-		-o $(CURDIR)/debian/$(pkgapps)/usr/share/commonwl/${app}.cwl; \
-	        done;
-	rm *.ctd
-	find $(CURDIR)/debian/$(pkgapps)/usr/share/commonwl -type f \
-		-name "*.cwl" | xargs chmod a+x
+#	for app in $$(ls $(CURDIR)/debian/$(pkgapps)/usr/lib/seqan/bin); \
+#		do $(CURDIR)/debian/$(pkgapps)/usr/lib/seqan/bin/$${app} \
+#		--write-ctd $${app}.ctd && CTDConverter cwl -i $${app}.ctd \
+#		-o $(CURDIR)/debian/$(pkgapps)/usr/share/commonwl/${app}.cwl; \
+#	        done;
+#	rm *.ctd
+#	find $(CURDIR)/debian/$(pkgapps)/usr/share/commonwl -type f \
+#		-name "*.cwl" | xargs chmod a+x
 
 override_dh_auto_clean:
 	dh_auto_clean



View it on GitLab: https://salsa.debian.org/med-team/seqan2/compare/3db687551ec2e61e4b413b03b046f22bca23f6ba...2f92c8c9bedda7c730dab99926f3484ea96908ea

-- 
View it on GitLab: https://salsa.debian.org/med-team/seqan2/compare/3db687551ec2e61e4b413b03b046f22bca23f6ba...2f92c8c9bedda7c730dab99926f3484ea96908ea
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