[med-svn] [Git][med-team/diamond-aligner][upstream] New upstream version 0.9.23+dfsg

[Andreas Tille]

Andreas Tille pushed to branch upstream at Debian Med / diamond-aligner


Commits:
e06c99fd by Andreas Tille at 2018-12-13T12:48:47Z
New upstream version 0.9.23+dfsg
- - - - -


30 changed files:

- .gitignore
- + .travis.yml
- CMakeLists.txt
- LICENSE
- + README.md
- − README.rst
- build_simple.sh
- src/ChangeLog
- src/align/align.cpp
- src/align/align.h
- src/align/banded_swipe_pipeline.cpp
- src/align/extend_ungapped.h
- src/align/greedy_pipeline.cpp
- src/align/query_mapper.cpp
- src/align/query_mapper.h
- src/align/swipe_pipeline.cpp
- src/basic/basic.cpp
- src/basic/config.cpp
- src/basic/config.h
- src/basic/const.h
- src/basic/diagonal_segment.h
- src/basic/hssp.cpp
- src/basic/masking.cpp
- src/basic/masking.h
- src/basic/match.h
- src/basic/packed_loc.h
- src/basic/packed_sequence.h
- src/basic/packed_transcript.h
- src/basic/parameters.h
- src/basic/reduction.h


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/diamond-aligner/commit/e06c99fdd5d713ab0c8799b52208a650cd891847

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