[med-svn] [Git][med-team/libhmsbeagle][master] 10 commits: New upstream version 3.1.2+dfsg

[Andreas Tille]

Andreas Tille pushed to branch master at Debian Med / libhmsbeagle


Commits:
2d02d401 by Andreas Tille at 2018-12-18T09:02:37Z
New upstream version 3.1.2+dfsg
- - - - -
0113a67f by Andreas Tille at 2018-12-18T09:02:50Z
Update upstream source from tag 'upstream/3.1.2+dfsg'

Update to upstream version '3.1.2+dfsg'
with Debian dir f081c8a543a06836cf0d28ef7193e491009e5a20
- - - - -
d7210b8f by Andreas Tille at 2018-12-18T09:02:51Z
New upstream version

- - - - -
72e40585 by Andreas Tille at 2018-12-18T09:03:18Z
Standards-Version: 4.2.1

- - - - -
3ad8b002 by Andreas Tille at 2018-12-18T09:03:18Z
Secure URI in copyright format

- - - - -
beee0ba6 by Andreas Tille at 2018-12-18T09:12:39Z
Respect DEB_BUILD_OPTIONS in override_dh_auto_test target

- - - - -
19896a8e by Andreas Tille at 2018-12-18T09:12:39Z
Remove trailing whitespace in debian/changelog

- - - - -
2b848088 by Andreas Tille at 2018-12-18T09:12:39Z
Remove trailing whitespace in debian/rules

- - - - -
9d3be790 by Andreas Tille at 2018-12-18T10:28:32Z
Ignore test failures which are most probably not relevant on real hardware but occure in restricted Debian build environment

- - - - -
9db376c2 by Andreas Tille at 2018-12-18T10:43:19Z
Upload to unstable

- - - - -


30 changed files:

- README.md
- app-benchmarks/v3-app-note/Dengue997.nex → benchmarks/v3-app-note/Dengue997.nex
- app-benchmarks/v3-app-note/Dengue997_s3_AMVN_BTL.xml → benchmarks/v3-app-note/Dengue997_s3_AMVN_BTL.xml
- app-benchmarks/v3-app-note/Dengue997_s3_AMVN_MPDLD.xml → benchmarks/v3-app-note/Dengue997_s3_AMVN_MPDLD.xml
- + benchmarks/v3-app-note/Dengue997_s3_codon.xml
- app-benchmarks/v3-app-note/mcmc-dengue.nex → benchmarks/v3-app-note/mcmc-dengue-multi-chain.nex
- + benchmarks/v3-app-note/mcmc-dengue-single-chain.nex
- + benchmarks/v3-app-note/run_benchmarks_pll_cipres.py
- configure.ac
- debian/changelog
- debian/control
- debian/copyright
- debian/rules
- examples/synthetictest/Makefile.am
- examples/synthetictest/synthetictest.cpp
- java/beagle/Beagle.java
- + java/beagle/BeagleBenchmarkFlag.java
- java/beagle/BeagleFactory.java
- java/beagle/BeagleInfo.java
- java/beagle/BeagleJNIImpl.java
- java/beagle/BeagleJNIWrapper.java
- + java/beagle/BenchmarkedResourceDetails.java
- java/beagle/GeneralBeagleImpl.java
- libhmsbeagle/BeagleImpl.h
- libhmsbeagle/CPU/BeagleCPU4StateImpl.h
- libhmsbeagle/CPU/BeagleCPU4StateImpl.hpp
- libhmsbeagle/CPU/BeagleCPUImpl.h
- libhmsbeagle/CPU/BeagleCPUImpl.hpp
- libhmsbeagle/CPU/BeagleCPUSSEImpl.hpp
- libhmsbeagle/CPU/Makefile.am


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/libhmsbeagle/compare/50ec7ec4ea966e175f5a9c90eb28d831e4ebab87...9db376c22fbdda984cf852ec28787b3e6c711b3b

-- 
View it on GitLab: https://salsa.debian.org/med-team/libhmsbeagle/compare/50ec7ec4ea966e175f5a9c90eb28d831e4ebab87...9db376c22fbdda984cf852ec28787b3e6c711b3b
You're receiving this email because of your account on salsa.debian.org.
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://alioth-lists.debian.net/pipermail/debian-med-commit/attachments/20181218/c15cfe47/attachment.html>