[med-svn] [Git][med-team/libhmsbeagle][upstream] New upstream version 3.1.2+dfsg

[Andreas Tille]

Andreas Tille pushed to branch upstream at Debian Med / libhmsbeagle


Commits:
2d02d401 by Andreas Tille at 2018-12-18T09:02:37Z
New upstream version 3.1.2+dfsg
- - - - -


27 changed files:

- README.md
- app-benchmarks/v3-app-note/Dengue997.nex → benchmarks/v3-app-note/Dengue997.nex
- app-benchmarks/v3-app-note/Dengue997_s3_AMVN_BTL.xml → benchmarks/v3-app-note/Dengue997_s3_AMVN_BTL.xml
- app-benchmarks/v3-app-note/Dengue997_s3_AMVN_MPDLD.xml → benchmarks/v3-app-note/Dengue997_s3_AMVN_MPDLD.xml
- + benchmarks/v3-app-note/Dengue997_s3_codon.xml
- app-benchmarks/v3-app-note/mcmc-dengue.nex → benchmarks/v3-app-note/mcmc-dengue-multi-chain.nex
- + benchmarks/v3-app-note/mcmc-dengue-single-chain.nex
- + benchmarks/v3-app-note/run_benchmarks_pll_cipres.py
- configure.ac
- examples/synthetictest/Makefile.am
- examples/synthetictest/synthetictest.cpp
- java/beagle/Beagle.java
- + java/beagle/BeagleBenchmarkFlag.java
- java/beagle/BeagleFactory.java
- java/beagle/BeagleInfo.java
- java/beagle/BeagleJNIImpl.java
- java/beagle/BeagleJNIWrapper.java
- + java/beagle/BenchmarkedResourceDetails.java
- java/beagle/GeneralBeagleImpl.java
- libhmsbeagle/BeagleImpl.h
- libhmsbeagle/CPU/BeagleCPU4StateImpl.h
- libhmsbeagle/CPU/BeagleCPU4StateImpl.hpp
- libhmsbeagle/CPU/BeagleCPUImpl.h
- libhmsbeagle/CPU/BeagleCPUImpl.hpp
- libhmsbeagle/CPU/BeagleCPUSSEImpl.hpp
- libhmsbeagle/CPU/Makefile.am
- libhmsbeagle/GPU/BeagleGPUImpl.h


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/libhmsbeagle/commit/2d02d4016bb602656101bfebf8f07be7b9d9fca5

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View it on GitLab: https://salsa.debian.org/med-team/libhmsbeagle/commit/2d02d4016bb602656101bfebf8f07be7b9d9fca5
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