[med-svn] [Git][med-team/bcbio][master] 5 commits: Preparing for 1.0.9 import

[Steffen Möller]

Steffen Möller pushed to branch master at Debian Med / bcbio


Commits:
f698b33e by Steffen Möller at 2018-07-07T21:37:38+02:00
Preparing for 1.0.9 import

- - - - -
6fe76bb3 by Steffen Möller at 2018-07-07T21:37:57+02:00
New upstream version 1.0.9
- - - - -
8c77e243 by Steffen Möller at 2018-07-07T21:38:32+02:00
Update upstream source from tag 'upstream/1.0.9'

Update to upstream version '1.0.9'
with Debian dir dd5095e9059df6e9d1c66dfafb2ef37a990bee33
- - - - -
f3321ce7 by Steffen Möller at 2018-07-07T23:18:46+02:00
Prepared for new 1.0.9 release.

- - - - -
419f6294 by Steffen Möller at 2018-07-07T23:19:30+02:00
Merge branch 'master' of salsa.debian.org:med-team/bcbio

- - - - -


30 changed files:

- .gitignore
- .travis.yml
- Dockerfile
- HISTORY.md
- README.rst
- bcbio/bam/__init__.py
- bcbio/bam/callable.py
- bcbio/bam/trim.py
- bcbio/broad/__init__.py
- bcbio/chipseq/__init__.py
- bcbio/chipseq/macs2.py
- bcbio/chipseq/peaks.py
- bcbio/cwl/create.py
- bcbio/cwl/cwlutils.py
- bcbio/cwl/defs.py
- bcbio/cwl/tool.py
- bcbio/cwl/workflow.py
- bcbio/distributed/multitasks.py
- bcbio/heterogeneity/__init__.py
- bcbio/install.py
- bcbio/ngsalign/alignprep.py
- bcbio/ngsalign/postalign.py
- bcbio/pipeline/alignment.py
- bcbio/pipeline/cleanbam.py
- bcbio/pipeline/datadict.py
- bcbio/pipeline/genome.py
- bcbio/pipeline/main.py
- bcbio/pipeline/qcsummary.py
- bcbio/pipeline/rnaseq.py
- bcbio/pipeline/run_info.py


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/bcbio/compare/04fae2cc47566fc50fffd2f3a17dc7f8577f9725...419f6294364c6d147dfb2f7483030988b860e278

-- 
View it on GitLab: https://salsa.debian.org/med-team/bcbio/compare/04fae2cc47566fc50fffd2f3a17dc7f8577f9725...419f6294364c6d147dfb2f7483030988b860e278
You're receiving this email because of your account on salsa.debian.org.
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://alioth-lists.debian.net/pipermail/debian-med-commit/attachments/20180707/5bf0154f/attachment-0001.html>