[med-svn] [Git][med-team/samtools][master] 9 commits: New upstream version 1.8

[Andreas Tille]

Andreas Tille pushed to branch master at Debian Med / samtools


Commits:
1452aced by Andreas Tille at 2018-05-03T12:02:04+02:00
New upstream version 1.8
- - - - -
cf330a23 by Andreas Tille at 2018-05-03T12:02:20+02:00
Update upstream source from tag 'upstream/1.8'

Update to upstream version '1.8'
with Debian dir c1791e4b4b846627ac181c5e25a26f548469b133
- - - - -
2cb67ab6 by Andreas Tille at 2018-05-03T12:02:20+02:00
New upstream version

- - - - -
0ccaa5ae by Andreas Tille at 2018-05-03T12:02:23+02:00
Point Vcs fields to salsa.debian.org

- - - - -
cb2185b4 by Andreas Tille at 2018-05-03T12:02:24+02:00
Standards-Version: 4.1.4

- - - - -
5ff7c75e by Andreas Tille at 2018-05-03T13:08:38+02:00
Update patches

- - - - -
e5d95bc9 by Andreas Tille at 2018-05-03T13:15:14+02:00
hardening=+all

- - - - -
e2e77e3d by Andreas Tille at 2018-05-03T13:16:19+02:00
Bump versioned Build-Depends: libhts-dev (>= 1.8)

- - - - -
1c37793d by Andreas Tille at 2018-05-03T13:21:28+02:00
Upload to experimental

- - - - -


30 changed files:

- − .appveyor.yml
- NEWS
- README
- bam.h
- bam2depth.c
- bam_addrprg.c
- bam_markdup.c
- bam_mate.c
- bam_md.c
- bam_sort.c
- bamshuf.c
- debian/changelog
- debian/control
- debian/patches/sort-tests-memory-limit.patch
- debian/rules
- misc/wgsim.1
- sam_view.c
- samtools.1
- stats.c
- + test/collate/collate.expected.sam
- − test/merge/2.merge.expected.bam
- + test/merge/2.merge.expected.sam
- − test/merge/3.merge.expected.bam
- + test/merge/3.merge.expected.sam
- − test/merge/4.merge.expected.bam
- + test/merge/4.merge.expected.sam
- − test/merge/5.merge.expected.bam
- test/merge/5.merge.expected.sam
- − test/merge/6.merge.expected.bam
- + test/merge/6.merge.expected.sam


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/samtools/compare/0fddc947cc77f5d5b60622a2f8e9193d43f3f679...1c37793dacc279b726fc5be2e44a888a3943a41f

---
View it on GitLab: https://salsa.debian.org/med-team/samtools/compare/0fddc947cc77f5d5b60622a2f8e9193d43f3f679...1c37793dacc279b726fc5be2e44a888a3943a41f
You're receiving this email because of your account on salsa.debian.org.
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://alioth-lists.debian.net/pipermail/debian-med-commit/attachments/20180503/986757ca/attachment-0001.html>