[med-svn] [Git][med-team/snpeff][master] 9 commits: Do not try to exclude files that are not part of the upstream source any more

[Andreas Tille]

Andreas Tille pushed to branch master at Debian Med / snpeff


Commits:
a2ad4628 by Andreas Tille at 2018-05-14T21:58:24+02:00
Do not try to exclude files that are not part of the upstream source any more

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47019c09 by Andreas Tille at 2018-05-14T22:03:05+02:00
New upstream version 4.3t+dfsg
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284523e6 by Andreas Tille at 2018-05-14T22:07:31+02:00
Update upstream source from tag 'upstream/4.3t+dfsg'

Update to upstream version '4.3t+dfsg'
with Debian dir e01031de78241d27cbf91bb79d36565b17c9d9f1
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c407230b by Andreas Tille at 2018-05-14T22:07:32+02:00
New upstream version

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7f6317f4 by Andreas Tille at 2018-05-14T22:07:33+02:00
debhelper 11

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1c5f1162 by Andreas Tille at 2018-05-14T22:07:56+02:00
Point Vcs fields to salsa.debian.org

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61053fa2 by Andreas Tille at 2018-05-14T22:07:56+02:00
Standards-Version: 4.1.4

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082b265a by Andreas Tille at 2018-05-14T22:21:13+02:00
Cleanup changelog since this is the first upload

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da15a77f by Andreas Tille at 2018-05-14T22:21:55+02:00
Fix license name

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21 changed files:

- .classpath
- .gitignore
- .settings/org.eclipse.jdt.core.prefs
- + SnpEf - Featured by SourceForge.pdf
- + config/snpEff.ENSEMBL_86.config
- + config/snpEff.NCBI.Felis_catus.config
- + config/snpEff.NCBI.Takifugu_rubripes.config
- config/snpEff.core.config
- config/snpEff.dbs.config
- − config/snpEff.etc.config
- config/snpEff.test.config
- − config/ucsc.txt
- debian/changelog
- debian/compat
- debian/control
- debian/copyright
- galaxy/tool-data/snpEff_genomes.loc
- galaxy/tool-data/snpEff_genomes.loc.sample
- git/update_force
- − hg38_refseq/test_hg38_NM_002117.build
- − hg38_refseq/test_hg38_NM_002117.cds


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/snpeff/compare/68f06f4479c9767567f91c38ad1a14aaa9bd9c97...da15a77f2d8cb36e61ae462f8d425dcd78df830c

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View it on GitLab: https://salsa.debian.org/med-team/snpeff/compare/68f06f4479c9767567f91c38ad1a14aaa9bd9c97...da15a77f2d8cb36e61ae462f8d425dcd78df830c
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