[med-svn] [Git][med-team/augustus][master] 12 commits: exclude training directory from source tarball

[Sascha Steinbiss]

Sascha Steinbiss pushed to branch master at Debian Med / augustus


Commits:
dc8b06c9 by Sascha Steinbiss at 2018-10-06T12:12:10Z
exclude training directory from source tarball

- - - - -
48b3b5fc by Sascha Steinbiss at 2018-10-06T12:12:19Z
adjust watchfile

- - - - -
faf2de90 by Sascha Steinbiss at 2018-10-06T12:12:35Z
New upstream version 3.3.2+dfsg
- - - - -
4850094f by Sascha Steinbiss at 2018-10-06T12:16:53Z
Merge tag 'upstream/3.3.2+dfsg'

Upstream version 3.3.2+dfsg

- - - - -
2c3dfff9 by Sascha Steinbiss at 2018-10-06T14:16:58Z
new upstream release

- - - - -
2e3aa218 by Sascha Steinbiss at 2018-10-06T14:17:20Z
exclude new training directory from tarball

- - - - -
76cd1e57 by Sascha Steinbiss at 2018-10-06T14:17:33Z
adjust doc-base

- - - - -
c348d21a by Sascha Steinbiss at 2018-10-06T14:17:45Z
use secure Format URL in d/copyright

- - - - -
83467888 by Sascha Steinbiss at 2018-10-06T14:17:57Z
add new build-deps for OpenSSL and libcurl

- - - - -
2576a219 by Sascha Steinbiss at 2018-10-06T14:18:10Z
refresh patches

- - - - -
64d80ebd by Sascha Steinbiss at 2018-10-06T14:18:19Z
set AUGUSTUS_CONFIG_PATH at build time to enable tests

- - - - -
d8db1020 by Sascha Steinbiss at 2018-10-06T15:45:56Z
re-introduce missing Format field

- - - - -


30 changed files:

- + .gitignore
- + .travis.yml
- + Dockerfile
- HISTORY.TXT
- Makefile
- README-cgp.txt
- − README.TXT
- + README.md
- auxprogs/aln2wig/Makefile
- auxprogs/aln2wig/aln2wig.c
- auxprogs/auxBamFilters/README
- auxprogs/auxBamFilters/eg1.s.bam
- auxprogs/auxBamFilters/eg2.bam
- auxprogs/auxBamFilters/operation_H_filter.txt
- auxprogs/auxBamFilters/operation_N_filter.txt
- auxprogs/auxBamFilters/toyAlignments.bam
- auxprogs/bam2wig/Makefile
- auxprogs/checkTargetSortedness/Makefile
- auxprogs/checkTargetSortedness/checkTargetSortedness.c
- auxprogs/compileSpliceCands/Makefile
- auxprogs/compileSpliceCands/chr21.fa
- auxprogs/compileSpliceCands/compileSpliceCands.c
- auxprogs/compileSpliceCands/list.c
- auxprogs/compileSpliceCands/list.h
- auxprogs/compileSpliceCands/out.gff
- auxprogs/filterBam/README
- auxprogs/filterBam/src/bamtools/LICENSE
- auxprogs/filterBam/src/bamtools/bamtools_sort.h
- auxprogs/filterBam/src/bamtools/bamtools_tool.h
- auxprogs/filterBam/src/filterBam.cc


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/augustus/compare/d20e585d1e7b25f940117fd031ecc7455ab420c0...d8db1020b7085eeb3487115f906f6f314fc044f7

-- 
View it on GitLab: https://salsa.debian.org/med-team/augustus/compare/d20e585d1e7b25f940117fd031ecc7455ab420c0...d8db1020b7085eeb3487115f906f6f314fc044f7
You're receiving this email because of your account on salsa.debian.org.
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://alioth-lists.debian.net/pipermail/debian-med-commit/attachments/20181006/8c28a56e/attachment.html>